ID:

dsi_57

 Coordinate:

chr2h_Mrandom_017:16860-16930 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.2 -23.0 -22.9

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AATGGGCGTCCTCGTATATGTCTATGTTATCAAGGATTTGCGTTGTCGACATCGAGACTCCACTTTGCCGCCTGATAAATCATGATATTTAACATTACGTAGAATGCAAAGCGGATTGATGTTGGTGAAGGTGGCATCTGATTGTAAGCATTTGTAACCAGTTATATTCTG
************************************.((((.((.((((((((((...(((.((((((...(((.......(((........)))....)))...)))))).)))))))))))))..)).))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
Ovary		 SRR553485
Ovary		 SRR553487
Ovary		 SRR553486
Ovary		 SRR553488
Ovary		 M025
embryo
 O001
Testis
 M053
Female-body		 M024
male body
 O002
Head
 GSM343915
embryo
 M023
head
..............................................................................................................................................TGTAAGCATTTGTAACCAGTTATA..... 24 0 3 106.00 318 0 125 168 3 22 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGATTGATG.................................................. 26 0 3 78.67 236 170 11 20 13 14 1 0 2 3 0 2 0
...............................................................................................TACGTAGAATGCAAAGCGGATTGATGT................................................. 27 0 3 76.00 228 144 28 18 12 9 17 0 0 0 0 0 0
........................TGTTATCAAGGATTTGCGTTGTCGAC......................................................................................................................... 26 0 4 65.50 262 15 94 92 34 22 4 0 1 0 0 0 0
..................................................................................................GTAGAATGCAAAGCGGATTGATGT................................................. 24 0 4 59.00 236 38 1 5 172 19 0 0 1 0 0 0 0
........................TGTTATCAAGGATTTGCGTTGTCGACA........................................................................................................................ 27 0 4 57.75 231 9 108 65 21 24 4 0 0 0 0 0 0
........................TGTTATCAAGGATTTGCGTTGTC............................................................................................................................ 23 0 4 51.25 205 8 101 56 29 11 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGATTGAT................................................... 25 0 3 44.33 133 60 0 0 0 3 62 0 0 4 3 0 1
........................................................................................................TGCAAAGCGGATTGATGTTGGTGAA.......................................... 25 0 4 24.75 99 19 32 24 12 11 0 0 1 0 0 0 0
........................TGTTATCAAGGATTTGCGTTGTCGA.......................................................................................................................... 25 0 4 22.75 91 5 33 19 21 11 0 0 2 0 0 0 0
.............................................................................................................................................TTGTAAGCATTTGTAACCAGTTATA..... 25 0 3 18.00 54 0 6 35 8 5 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGATTGA.................................................... 24 0 3 17.00 51 43 0 2 0 0 0 6 0 0 0 0 0
..................................................................................................GTAGAATGCAAAGCGGATTGATGTT................................................ 25 0 4 16.00 64 9 0 1 47 7 0 0 0 0 0 0 0
........................................................................................................TGCAAAGCGGATTGATGTTGGTGAAGG........................................ 27 0 4 15.50 62 1 25 22 7 5 0 0 2 0 0 0 0
........................TGTTATCAAGGATTTGCGTTGTCG........................................................................................................................... 24 0 4 12.00 48 7 14 12 7 8 0 0 0 0 0 0 0
.................................................................................................CGTAGAATGCAAAGCGGATTGATGT................................................. 25 0 3 10.00 30 12 0 11 4 3 0 0 0 0 0 0 0
...................................................TCGAGACTCCACTTTGCCGCCTGA................................................................................................ 24 0 1 9.00 9 2 1 3 1 0 0 1 1 0 0 0 0
..................................................................................................GTAGAATGCAAAGCGGATTGATG.................................................. 23 0 4 9.00 36 7 0 0 28 1 0 0 0 0 0 0 0
........................................................................................................TGCAAAGCGGATTGATGTTGGTGA........................................... 24 0 4 8.25 33 5 13 9 6 0 0 0 0 0 0 0 0
......................TATGTTATCAAGGATTTGCGTTGTC............................................................................................................................ 25 0 4 8.00 32 3 1 10 14 4 0 0 0 0 0 0 0
.................................................................................................CGTAGAATGCAAAGCGGATTGATG.................................................. 24 0 3 7.67 23 1 0 12 8 2 0 0 0 0 0 0 0
..................................................................................................GTAGAATGCAAAGCGGATTGATGTTG............................................... 26 0 4 7.50 30 6 0 2 19 3 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCG.......................................................... 18 0 3 6.33 19 19 0 0 0 0 0 0 0 0 0 0 0
...........................TATCAAGGATTTGCGTTGTCGACATC...................................................................................................................... 26 0 4 6.25 25 3 4 5 10 2 1 0 0 0 0 0 0
.........................................................................................TAACATTACGTAGAATGCAAAGCGGA........................................................ 26 0 3 6.00 18 0 7 3 7 1 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGATTG..................................................... 23 0 3 6.00 18 7 0 2 1 1 1 3 3 0 0 0 0
................................................................................CATGATATTTAACATTACGTAGAAT.................................................................. 25 0 2 5.50 11 0 8 1 0 2 0 0 0 0 0 0 0
..........................................................................................................................TGGTGAAGGTGGCATCTGATTGTA......................... 24 0 4 5.25 21 18 0 1 0 2 0 0 0 0 0 0 0
...............................AAGGATTTGCGTTGTCGACATCGAGAC................................................................................................................. 27 0 1 5.00 5 0 2 1 1 1 0 0 0 0 0 0 0
...............................AAGGATTTGCGTTGTCGACATCGAGA.................................................................................................................. 26 0 1 5.00 5 0 2 3 0 0 0 0 0 0 0 0 0
.....................................................GAGACTCCACTTTGCCGCCTGATAAATCA......................................................................................... 29 0 1 5.00 5 0 4 0 1 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGATT...................................................... 22 0 3 5.00 15 8 0 1 0 0 5 0 1 0 0 0 0
........................TGTTATCAAGGATTTGCGTTGTCGACAT....................................................................................................................... 28 0 4 4.75 19 4 5 5 3 2 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGA........................................................ 20 0 3 4.67 14 13 0 0 0 0 1 0 0 0 0 0 0
................................................................................................ACGTAGAATGCAAAGCGGATTGATGT................................................. 26 0 3 4.67 14 7 4 1 1 1 0 0 0 0 0 0 0
...................................................TCGAGACTCCACTTTGCCGCC................................................................................................... 21 0 1 4.00 4 1 0 0 2 0 1 0 0 0 0 0 0
.............................TCAAGGATTTGCGTTGTCGACATCGAGA.................................................................................................................. 28 0 1 4.00 4 0 2 1 0 1 0 0 0 0 0 0 0
..........................................................TCCACTTTGCCGCCTGATAAATCATGA...................................................................................... 27 0 1 4.00 4 0 1 0 2 1 0 0 0 0 0 0 0
..................................................................................TGATATTTAACATTACGTAGAATGC................................................................ 25 0 2 4.00 8 0 2 3 0 3 0 0 0 0 0 0 0
........................................................................................................TGCAAAGCGGATTGATGTTGGTGAAGGT....................................... 28 0 4 3.75 15 0 5 3 7 0 0 0 0 0 0 0 0
................................................................................................ACGTAGAATGCAAAGCGGATTGATG.................................................. 25 0 3 3.67 11 0 6 3 2 0 0 0 0 0 0 0 0
........................................................................................................TGCAAAGCGGATTGATGTTGGTGAAG......................................... 26 0 4 3.50 14 0 5 5 2 2 0 0 0 0 0 0 0
........................TGTTATCAAGGATTTGCGTTGTCGACATC...................................................................................................................... 29 0 4 3.25 13 0 3 9 0 0 0 0 1 0 0 0 0
...................................................TCGAGACTCCACTTTGCCGCCTGATA.............................................................................................. 26 0 1 3.00 3 0 2 1 0 0 0 0 0 0 0 0 0
................TATGTCTATGTTATCAAGGATTTGCGT................................................................................................................................ 27 0 1 3.00 3 0 0 0 0 3 0 0 0 0 0 0 0
...................................................TCGAGACTCCACTTTGCCGCCTGATAA............................................................................................. 27 0 1 3.00 3 0 0 1 0 0 2 0 0 0 0 0 0
...........................................................................TAAATCATGATATTTAACATTACGTAGA.................................................................... 28 0 1 3.00 3 0 1 0 1 1 0 0 0 0 0 0 0
...........................................................................TAAATCATGATATTTAACATTACGTAGAA................................................................... 29 0 1 3.00 3 0 0 0 2 1 0 0 0 0 0 0 0
...........TCGTATATGTCTATGTTATCAAGGA....................................................................................................................................... 25 0 1 3.00 3 0 0 0 1 2 0 0 0 0 0 0 0
...................................................................................................TAGAATGCAAAGCGGATTGATGTTGGT............................................. 27 0 4 3.00 12 2 4 4 2 0 0 0 0 0 0 0 0
...........TCGTATATGTCTATGTTATCAAGGATT..................................................................................................................................... 27 0 1 3.00 3 0 0 1 1 1 0 0 0 0 0 0 0
................................AGGATTTGCGTTGTCGACATCGAGAC................................................................................................................. 26 0 1 3.00 3 0 1 0 2 0 0 0 0 0 0 0 0
..TGGGCGTCCTCGTATATGTCTA................................................................................................................................................... 22 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TGGTGAAGGTGGCATCTGATTGTAA........................ 25 0 4 3.00 12 7 1 2 1 1 0 0 0 0 0 0 0
.............................TCAAGGATTTGCGTTGTCGACATCGAGAC................................................................................................................. 29 0 1 3.00 3 0 2 0 1 0 0 0 0 0 0 0 0
...........................TATCAAGGATTTGCGTTGTCGACATCGA.................................................................................................................... 28 0 4 2.75 11 0 4 3 3 1 0 0 0 0 0 0 0
.............................TCAAGGATTTGCGTTGTCGACATC...................................................................................................................... 24 0 4 2.75 11 6 3 2 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGG......................................................... 19 0 3 2.67 8 2 0 0 0 0 0 6 0 0 0 0 0
.....................................................................................TATTTAACATTACGTAGAATGCAAAGCGGA........................................................ 30 0 3 2.67 8 0 4 1 3 0 0 0 0 0 0 0 0
..............................................................................................TTACGTAGAATGCAAAGCGGATTGATG.................................................. 27 0 3 2.67 8 0 6 0 1 1 0 0 0 0 0 0 0
..............................................................................................................................GAAGGTGGCATCTGATTGTAAGCATT................... 26 0 4 2.50 10 4 1 3 1 1 0 0 0 0 0 0 0
................................................................................CATGATATTTAACATTACGTAGAATGC................................................................ 27 0 2 2.50 5 1 3 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................TGAAGGTGGCATCTGATTGTAAGCAT.................... 26 0 4 2.25 9 7 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................................................TGAAGGTGGCATCTGATTGTAAGCA..................... 25 0 4 2.25 9 2 1 0 5 1 0 0 0 0 0 0 0
..........................................................................................................................TGGTGAAGGTGGCATCTGATTGT.......................... 23 0 4 2.25 9 8 0 0 1 0 0 0 0 0 0 0 0
..............TATATGTCTATGTTATCAAGGATT..................................................................................................................................... 24 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0
................................................................................CATGATATTTAACATTACGTAGAA................................................................... 24 0 2 2.00 4 0 3 1 0 0 0 0 0 0 0 0 0
..TGGGCGTCCTCGTATATGTCTATGT................................................................................................................................................ 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..................................................ATCGAGACTCCACTTTGCCGCCTGA................................................................................................ 25 0 1 2.00 2 0 0 1 0 0 0 0 0 1 0 0 0
...............................AAGGATTTGCGTTGTCGACATCGAGACTC............................................................................................................... 29 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGTTGGTGAAGGTGGCATCTGATTG........................... 25 0 4 2.00 8 8 0 0 0 0 0 0 0 0 0 0 0
...........................................TGTCGACATCGAGACTCCACTTTG........................................................................................................ 24 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
.............GTATATGTCTATGTTATCAAGGATT..................................................................................................................................... 25 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
.......................................................................................TTTAACATTACGTAGAATGCAAAGCGGA........................................................ 28 0 3 2.00 6 0 3 1 1 1 0 0 0 0 0 0 0
...................................................TCGAGACTCCACTTTGCCGCCTGATAAA............................................................................................ 28 0 1 2.00 2 0 0 1 0 1 0 0 0 0 0 0 0
..................................................................................................GTAGAATGCAAAGCGGATTGATGTTGGT............................................. 28 0 4 1.75 7 0 0 0 7 0 0 0 0 0 0 0 0
.....................................................................................................GAATGCAAAGCGGATTGATG.................................................. 20 0 4 1.75 7 7 0 0 0 0 0 0 0 0 0 0 0
........................TGTTATCAAGGATTTGCGTTGT............................................................................................................................. 22 0 4 1.75 7 0 4 2 0 0 0 0 1 0 0 0 0
........................................................................................................TGCAAAGCGGATTGATGTTGGT............................................. 22 0 4 1.75 7 3 3 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................TGGTGAAGGTGGCATCTGATTGTAAGC...................... 27 0 4 1.75 7 5 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................TGGTGAAGGTGGCATCTGATTGTAAGCA..................... 28 0 4 1.75 7 0 2 1 3 0 0 0 1 0 0 0 0
............................ATCAAGGATTTGCGTTGTCGACATC...................................................................................................................... 25 0 4 1.75 7 0 2 1 1 0 2 0 0 0 0 1 0
.........................................................................................TAACATTACGTAGAATGCAAAGCGG......................................................... 25 0 3 1.67 5 2 0 3 0 0 0 0 0 0 0 0 0
...........................TATCAAGGATTTGCGTTGTCGACAT....................................................................................................................... 25 0 4 1.50 6 0 1 0 4 1 0 0 0 0 0 0 0
..........................................................................................................................TGGTGAAGGTGGCATCTGATTGTAAG....................... 26 0 4 1.50 6 6 0 0 0 0 0 0 0 0 0 0 0
........................TGTTATCAAGGATTTGCGTTG.............................................................................................................................. 21 0 4 1.50 6 0 0 0 0 0 2 4 0 0 0 0 0
..................................................................................TGATATTTAACATTACGTAGAATG................................................................. 24 0 2 1.50 3 0 1 1 0 1 0 0 0 0 0 0 0
................................................................................CATGATATTTAACATTACGTAGAATG................................................................. 26 0 2 1.50 3 0 2 1 0 0 0 0 0 0 0 0 0
..............................................................................................TTACGTAGAATGCAAAGCGGATTGATGT................................................. 28 0 3 1.33 4 0 1 0 3 0 0 0 0 0 0 0 0
.................................................................................................CGTAGAATGCAAAGCGGATTGATGTT................................................ 26 0 3 1.33 4 0 0 0 3 1 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGATTGAC................................................... 25 1 3 1.33 4 1 0 0 0 0 3 0 0 0 0 0 0
...........................................................................................................AAAGCGGATTGATGTTGGTGAAGGT....................................... 25 0 4 1.25 5 1 1 2 1 0 0 0 0 0 0 0 0
...........................................................................................................AAAGCGGATTGATGTTGGTGAAGG........................................ 24 0 4 1.25 5 1 2 0 1 1 0 0 0 0 0 0 0
..........................................................................................................................TGGTGAAGGTGGCATCTGATTGTAAGCAT.................... 29 0 4 1.25 5 0 1 1 3 0 0 0 0 0 0 0 0
..................................................................................................GTAGAATGCAAAGCGGATTGATGTTGG.............................................. 27 0 4 1.25 5 1 0 0 4 0 0 0 0 0 0 0 0
.......................................................................................................................TGTTGGTGAAGGTGGCATCTGATTGTA......................... 27 0 4 1.25 5 3 0 1 1 0 0 0 0 0 0 0 0
........................TGTTATCAAGGATTTGCGTTGTCGAT......................................................................................................................... 26 1 4 1.25 5 0 2 2 1 0 0 0 0 0 0 0 0
.............................................................................................................................TGAAGGTGGCATCTGATTGTAAGCATT................... 27 0 4 1.25 5 3 1 0 1 0 0 0 0 0 0 0 0
........................TGTTATCAAGGATTTGCGTT............................................................................................................................... 20 0 4 1.25 5 1 0 0 0 0 0 4 0 0 0 0 0
.........................................................................................................................TTGGTGAAGGTGGCATCTGATTGTA......................... 25 0 4 1.25 5 4 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................GTAGAATGCAAAGCGGATTGAT................................................... 22 0 4 1.25 5 4 0 0 1 0 0 0 0 0 0 0 0
.......GTCCTCGTATATGTCT.................................................................................................................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................ATCGAGACTCCACTTTGCCGCC................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..TGGGCGTCCTCGTATATGTCTATGTTA.............................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................TGATATTTAACATTACGTAGAATGCAAAG............................................................ 29 0 2 1.00 2 0 0 2 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGATTGATGTA................................................ 28 1 3 1.00 3 1 1 0 0 1 0 0 0 0 0 0 0
..............................................CGACATCGAGACTCCACTTTGCC...................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................TATTTAACATTACGTAGAATGCAAAGCGG......................................................... 29 0 3 1.00 3 0 1 0 2 0 0 0 0 0 0 0 0
................................AGGATTTGCGTTGTCGACATCGAGACTC............................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................TTGCGTTGTCGACATCGAGACT................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................TCCACTTTGCCGCCTGATAAA............................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................TCGAGACTCCACTTTGCCGCCTGAT............................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TGGTGAAGGTGGCATCTG............................... 18 0 4 1.00 4 4 0 0 0 0 0 0 0 0 0 0 0
................TATGTCTATGTCATCAAGGATT..................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................ATCGAGACTCCACTTTGCCGCCTGT................................................................................................ 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGCAAAGCGGATTGATGTTGGTG............................................ 23 0 4 1.00 4 1 3 0 0 0 0 0 0 0 0 0 0
......................................TGCGTTGTCGACATCGAGACTCCACT........................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................GAGACTCCACTTTGCCGCCTGG................................................................................................ 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................GAGACTCCACTTTGCCGCCTGATAAA............................................................................................ 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.ATGGGCGTCCTCGTATA......................................................................................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........TCGTATATGTCTATGTTATCAAGGAT...................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGATTGT.................................................... 24 1 3 1.00 3 0 0 0 0 0 3 0 0 0 0 0 0
..TGGGCGTCCTCGTATATGAAT.................................................................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
......................................TGCGTTGTCGACATCGAGACT................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................TATCAAGGATTTGCGTTGTCGACATCGAGAC................................................................................................................. 31 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................GAATGCAAAGCGGATTGATGTTGGT............................................. 25 0 4 1.00 4 2 0 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................TGGTGAAGGTGGCATC................................. 16 0 4 1.00 4 4 0 0 0 0 0 0 0 0 0 0 0
...................................................TCGAGACTCCACTTTGCCGC.................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................TGTTATCAAGGATTTGCGT................................................................................................................................ 19 0 4 1.00 4 0 0 0 0 0 0 4 0 0 0 0 0
...........................TATCAAGGATTTGCGTTGTCGACATCGAGA.................................................................................................................. 30 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..TGGGCGTCCTCGTATATGTTT.................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.......GTCCTCGTATATGTCTA................................................................................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGAT....................................................... 21 0 3 1.00 3 2 0 0 0 0 1 0 0 0 0 0 0
...........................................................................TAAATCATGATATTTAACATTACGTA...................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................TGATATTTAACATTACGTAGAAT.................................................................. 23 0 2 1.00 2 0 0 2 0 0 0 0 0 0 0 0 0
............................ATCAAGGATTTGCGTTGTCGACATCGAGA.................................................................................................................. 29 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................TGGTGAAGGTGGCATCTGATT............................ 21 0 4 1.00 4 4 0 0 0 0 0 0 0 0 0 0 0
..................................................................................TGATATTTAACATTACGTAGAATGCA............................................................... 26 0 2 1.00 2 0 1 1 0 0 0 0 0 0 0 0 0
......................................TGCGTTGTCGACATCGAGACTCCAC............................................................................................................ 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..TGGGAGTCCTCGTATATGTCT.................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......GTCCTCGTATATGTCTATGTTATCAAGGA....................................................................................................................................... 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................TGATGTTGGTGAAGGTGGCATCTG............................... 24 0 4 1.00 4 4 0 0 0 0 0 0 0 0 0 0 0
.........................................................CTCCACTTTGCCGCCTGATAAATCA......................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................TGATATTTAACATTACGTAGAATGCAAA............................................................. 28 0 2 1.00 2 0 1 0 0 1 0 0 0 0 0 0 0
...........................TATCAAGGATTTGCGTTGTCGACA........................................................................................................................ 24 0 4 1.00 4 0 0 0 4 0 0 0 0 0 0 0 0
...................................................................................................................TTGATGTTGGTGAAGGTGGCATCTGAT............................. 27 0 4 1.00 4 2 1 1 0 0 0 0 0 0 0 0 0
..................................................ATCGAGACTCCACTTTGCCGCCTGG................................................................................................ 25 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................CTGATTGTAAGCATTTGTAACCAGT......... 25 0 3 1.00 3 0 0 0 0 0 0 3 0 0 0 0 0
..............................................................................................TTACGTAGAATGCAAAGCGGATTGA.................................................... 25 0 3 1.00 3 0 0 1 0 0 2 0 0 0 0 0 0
......................................TGCGTTGTCGACATCGAGACTCCA............................................................................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
................................AGGATTTGCGTTGTCGACATCGAGA.................................................................................................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................TCAAGGATTTGCGTTTTCGACATCGAGA.................................................................................................................. 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................TCGGGACTCCACTTTGCCGCCTGATA.............................................................................................. 26 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................TGTAACCAGTTATATTCT. 18 0 2 1.00 2 0 0 0 0 0 0 2 0 0 0 0 0
.................................................................TGCCGCCTGATAAATCATGATATT.................................................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................TATTTAACATTACGTAGAATGCAAAGC........................................................... 27 0 3 1.00 3 0 0 2 0 1 0 0 0 0 0 0 0
...............................................GACATCGAGACTCCACTTTGCCGCC................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.....................................TTGCGTTGTCGACATCGAG................................................................................................................... 19 0 4 1.00 4 0 0 0 0 0 0 0 0 0 4 0 0
......................................................AGACTCCACTTTGCCGCCTGATAAATCA......................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................CAAGGATTTGCGTTGTCGACATCGAGAC................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................TCAAGGATTTGCGTTGTCGACATCGA.................................................................................................................... 26 0 4 0.75 3 0 1 1 0 1 0 0 0 0 0 0 0
...............................AAGGATTTGCGTTGTCGACATC...................................................................................................................... 22 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................GAATGCAAAGCGGATTGAT................................................... 19 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TGGTGAAGGTGGCATCTGA.............................. 19 0 4 0.75 3 2 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................TTGATGTTGGTGAAGGTGGCATCTG............................... 25 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AGCGGATTGATGTTGGTGAAGGTGGCA................................... 27 0 4 0.75 3 0 2 0 1 0 0 0 0 0 0 0 0
.....................................................................................................GAATGCAAAGCGGATTGATGT................................................. 21 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AGCGGATTGATGTTGGTGAAGGTG...................................... 24 0 4 0.75 3 0 0 3 0 0 0 0 0 0 0 0 0
.............................................................................................................AGCGGATTGATGTTGGTGAAGG........................................ 22 0 4 0.75 3 0 0 3 0 0 0 0 0 0 0 0 0
.............................................................................................................................TGAAGGTGGCATCTGATTGTAAGC...................... 24 0 4 0.75 3 2 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................TGATGTTGGTGAAGGTGGC.................................... 19 0 4 0.75 3 2 1 0 0 0 0 0 0 0 0 0 0
........................TGTTATCAAGGACTTGCGTTGTC............................................................................................................................ 23 1 4 0.75 3 0 3 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGTTGGTGAAGGTGGCATCTGAT............................. 23 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0
........................TGTTATCAAGGATTTGCGTTGTCAAC......................................................................................................................... 26 1 4 0.75 3 0 2 0 1 0 0 0 0 0 0 0 0
..................................................................................................GTAGAATGCAAAGCGGATTGA.................................................... 21 0 4 0.75 3 1 0 0 1 1 0 0 0 0 0 0 0
.......................................................................................................................................ATCTGATTGTAAGCATTTGTAACCAGT......... 27 0 3 0.67 2 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGC........................................................... 17 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAACCGGATTGAT................................................... 25 1 3 0.67 2 0 0 0 0 0 2 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAG............................................................ 16 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGATTGATGTT................................................ 28 0 3 0.67 2 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCTGATTG..................................................... 23 1 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGATTGATGATT............................................... 29 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TGATTGTAAGCATTTGTAACCAGT......... 24 0 3 0.67 2 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................TTTAACATTACGTAGAA................................................................... 17 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCAGATTGAT................................................... 25 1 3 0.67 2 0 0 0 0 0 2 0 0 0 0 0 0
.................................................................................................CGTAGAATGCAAAGCGGATTGATGTTG............................................... 27 0 3 0.67 2 0 0 1 0 1 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGTTTGATGT................................................. 27 1 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
........................................................................................TTAACATTACGTAGAATGCAAAGCGGAT....................................................... 28 0 3 0.67 2 0 0 1 1 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGATTGATT.................................................. 26 1 3 0.67 2 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................TTACGTAGAATGCAAAGCGGATTG..................................................... 24 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TGATTGTAAGCATTTGTAACCAGTTA....... 26 0 3 0.67 2 0 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................TAACATTACGTAGAATGCAAAGCGGAT....................................................... 27 0 3 0.67 2 0 1 1 0 0 0 0 0 0 0 0 0
................................................................................................ACGTAGAATGCAAAGCGGATTGATGTT................................................ 27 0 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGATCGATGT................................................. 27 1 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGATTGATGGT................................................ 28 1 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGATTGG.................................................... 24 1 3 0.67 2 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................TGTAAGCATTTGTAACTAGTTATA..... 24 1 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TGTAAGCATTTGCAACCAGTTATA..... 24 1 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
........................................................................................TTAACATTACGTAGAATGCAAAGCGGA........................................................ 27 0 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0 0
........................TGTTATCAAGGATTTGCGGTGTCGACA........................................................................................................................ 27 1 4 0.50 2 0 0 1 0 0 0 0 1 0 0 0 0
...............................................................................TCATGATATTTAACATTACGTAGAATGC................................................................ 28 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................TTGATGTTGGTGAAGGTGGC.................................... 20 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GAAGGTGGCATCTGATTGTAAGCA..................... 24 0 4 0.50 2 0 1 0 1 0 0 0 0 0 0 0 0
..................................................................................TGATATTTAACATTACGTAGAATGCAA.............................................................. 27 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
......................TATGTTATCAAGGATTTGCGTTGT............................................................................................................................. 24 0 4 0.50 2 0 0 0 0 2 0 0 0 0 0 0 0
............................................................................................................AAGCGGATTGATGTTGGTGAAGGT....................................... 24 0 4 0.50 2 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................TGATATTTAACATTACGTA...................................................................... 19 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................GCGGATTGATGTTGGTGAAGGTGGCA................................... 26 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGCAAAGCGGATTGATGT................................................. 18 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GAAGGTGGCATCTGATTGTAAGCAT.................... 25 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0
..........................TTATCAAGGATTTGCGTTGTCGACA........................................................................................................................ 25 0 4 0.50 2 0 0 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................TGTAAGCATTTGTAACCAGTTATATT... 26 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................TTGATGTTGGTGAAGGTGGCATC................................. 23 0 4 0.50 2 1 0 1 0 0 0 0 0 0 0 0 0
........................TGTTATCAAGGATTTGCGTTGTCGAA......................................................................................................................... 26 1 4 0.50 2 0 0 1 1 0 0 0 0 0 0 0 0
........................TGTTATCAAGGATTTGCGTTGTCGACT........................................................................................................................ 27 1 4 0.50 2 0 1 1 0 0 0 0 0 0 0 0 0
..........................TTATCAAGGATTTGCGTTGTCGACATC...................................................................................................................... 27 0 4 0.50 2 0 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................TAGAATGCAAAGCGGATTGATGT................................................. 23 0 4 0.50 2 1 0 0 0 1 0 0 0 0 0 0 0
.............................TCAAGGATTTGCGTTGTCGACAT....................................................................................................................... 23 0 4 0.50 2 0 0 0 1 1 0 0 0 0 0 0 0
............................ATCAAGGATTTGCGTTGTCGACATCGA.................................................................................................................... 27 0 4 0.50 2 0 0 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................TGTAAGCATTTGTAACCAGTTATATTC.. 27 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................TGATATTTAACATTACGTAGAATGCAAAGC........................................................... 30 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................GTAGAATACAAAGCGGATTGATGT................................................. 24 1 4 0.50 2 0 0 1 1 0 0 0 0 0 0 0 0
........................TGTTATCAAGGACTTGCGTTGT............................................................................................................................. 22 1 4 0.50 2 0 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................AAGGTGGCATCTGATTG........................... 17 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGTTGGTGAAGGTGGC.................................... 16 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TTGTAAGCATTTGTAACCAGTTATATTC.. 28 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0
..........................TTATCAAGGATTTGCGTTGTCGAC......................................................................................................................... 24 0 4 0.50 2 0 1 1 0 0 0 0 0 0 0 0 0
......................TATGTTATCAAGGATTTGCGTTGTCGA.......................................................................................................................... 27 0 4 0.50 2 0 0 0 1 1 0 0 0 0 0 0 0
....................................................................................................................TGATGTTGGTGAAGGTGGCATCTGAT............................. 26 0 4 0.50 2 1 0 1 0 0 0 0 0 0 0 0 0
............................ATCAAGGATTTGCGTTGTCGACATCG..................................................................................................................... 26 0 4 0.50 2 0 0 1 0 1 0 0 0 0 0 0 0
................................................................................CATGATATTTAACATTACGTAGA.................................................................... 23 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TGAAGGTGGCATCTGATTGTAAA....................... 23 1 4 0.50 2 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................CATGATATTAAACATTACGTAGAA................................................................... 24 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
.....GAGTCCTCGTATATGTCTCTA................................................................................................................................................. 21 3 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................TGATGTTGGTGAAGGTG...................................... 17 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................TTTATCAAGGATTTGCGTTGTC............................................................................................................................ 22 1 4 0.50 2 0 0 2 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGATTGATGGTC............................................... 29 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TTACGTAGAATGCAAAGC........................................................... 18 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................TTACGTAGAATGCAAAGCGGATTGAT................................................... 26 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................TAACATTACGTAGAATGCAAAGCGGAG....................................................... 27 1 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................TACGTAGAATTCAAAGCGGATTGATG.................................................. 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGGTTGATGT................................................. 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGAAGAACGCAAAGCGGATTGAT................................................... 25 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................TTAAGCATTTGTAACCAGTTATA..... 23 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGATTGATGGA................................................ 28 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CATTACGTAGAATGCAAAGCGGATTGA.................................................... 27 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................CGTATAATGCAAAGCGGATTGATGT................................................. 25 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................TATTACGTAGAATGCAAAGCGGATTGA.................................................... 27 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................TGCGTAGAATGCAAAGCGGATTGATGT................................................. 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................TAACATTACGTAGAATGCAAAGCGGATT...................................................... 28 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTACAATGCAAAGCGGATTGA.................................................... 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAGTGCAAAGCGGATTGATG.................................................. 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TTGTAAGCATTTGTAACAAGTTATA..... 25 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAGAGCGGATTGG.................................................... 24 2 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCATAGCGGATTGATGT................................................. 27 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................TTTAACATTACGTAGAATGCAAAGC........................................................... 25 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGACTGCAAAGCGGATTGATGT................................................. 27 1 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................TTACGTAGAATGCCAAGCGGATTGATGT................................................. 28 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TTGAAGCATTTGTAACCAGTTATA..... 24 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAAAATGCAAAGCGGATTGA.................................................... 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATTCAAAGCGGATTGA.................................................... 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAAATCAAAGCGGACTGATGT................................................. 27 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGATTGATGC................................................. 27 1 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................TGTAAGAATTTGTAACCAGTTATA..... 24 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AGTAAGCATTTGTAACCAGTTATA..... 24 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGATTGAAAT................................................. 27 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGATTGAAGGG................................................ 28 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TGAACATTACGTAGAATGCAAAGCGGA........................................................ 27 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAGTGCAAAGCGGATTGATGT................................................. 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCGAAGCGGATTGATG.................................................. 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TGTAAGCATTTGTAACCAGTTATTC.... 25 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................TGATTGTAAGCATTTGTAACCAGTTATA..... 28 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCTGATTGATG.................................................. 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGATTGATA.................................................. 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGATTGATGTGAC.............................................. 30 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTGGAATGCAAAGTGGATTGGTGT................................................. 27 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TTTAACATTGCGTAGAATGCAAAGCGGA........................................................ 28 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................TGATTGTAAGCATTTGTAACCAGTTAT...... 27 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................ACGTAGAATGCAAAGCGGATAGATG.................................................. 25 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TGTAAGCATTTGTAACAAGTTATA..... 24 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................CGTAGAATGCAAAGCGGATTGATGTTGG.............................................. 28 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TTTAAGCATTTGTAACCAGTTATA..... 24 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TGTAAGCATATGTAACCAGTTATA..... 24 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TATAAGCATTTGTAACCAGTTATA..... 24 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TTGTAACCATTTGTAACCAGTTATA..... 25 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................TCCGTAGAATGCACAGCGGATTGATG.................................................. 26 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................ATTACGTAGAATGCAAAGCGGA........................................................ 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................TTACGCAGAATGCAAAGCGGATT...................................................... 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGAGGATTGA.................................................... 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................TAACATTACGTAGAATGCAAACCGGA........................................................ 26 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................ACGTAGAATGCAAAGCGGATTGAT................................................... 24 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TGTAAGCATTTGAAACCAGTTATA..... 24 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGATTGACG.................................................. 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAA............................................................. 15 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TACGTAGAATGCAAAGCGGAGTGATGT................................................. 27 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................ATGTTGGTGAAGGTGGCATCTG............................... 22 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TGAAGGTGGCATCTG............................... 15 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGCAAAGCGGATTGATG.................................................. 17 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................GTGGCATCTGATTGTAA........................ 17 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................AATGCAAAGCGGATTGATGTTGGT............................................. 24 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TTGGTGAAGGTGGCATCTGATAAAAA........................ 26 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CAGAATATAACTGGTTACAAATGCTTACAATCAGATGCCACCTTCACCAACATCAATCCGCTTTGCATTCTACGTAATGTTAAATATCATGATTTATCAGGCGGCAAAGTGGAGTCTCGATGTCGACAACGCAAATCCTTGATAACATAGACATATACGAGGACGCCCATT
***********************************..((((.((..(((((((((((((.((((((...(((....(((........))).......)))...)))))).)))...)))))))))).)).)))).************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Ovary		 SRR553486
Ovary		 SRR553487
Ovary		 SRR553488
Ovary		 SRR618934
Ovary		 M053
Female-body		 O001
Testis
 M025
embryo
 GSM343915
embryo
.........................................................................................................................................CTTGATAACATAGACATATACGAGGA........ 26 0 1 286.00 286 97 89 56 33 9 2 0 0 0
.........................................................................................................................................CTTGATAACATAGACATATACGA........... 23 0 1 35.00 35 9 12 9 5 0 0 0 0 0
...............................................................................TTAAATATCATGATTTATCAGGCGGC.................................................................. 26 0 1 30.00 30 20 0 9 1 0 0 0 0 0
.........................................................................................................................................CTTGATAACATAGACATATACGAGG......... 25 0 1 14.00 14 5 2 5 0 1 1 0 0 0
.................................................................................AAATATCATGATTTATCAGGCGGC.................................................................. 24 0 1 12.00 12 10 0 2 0 0 0 0 0 0
..............................................................................................TATCAGGCGGCAAAGTGGAGTCTCGA................................................... 26 0 1 7.00 7 0 1 0 1 3 2 0 0 0
.............................................................................TGTTAAATATCATGATTTATCAGGCGGC.................................................................. 28 0 1 7.00 7 4 2 1 0 0 0 0 0 0
....................................................................................................................TCGATGTCGACAACGCAAATCCTTGA............................. 26 0 4 5.50 22 7 9 3 3 0 0 0 0 0
................................................................................TAAATATCATGATTTATCAGGCGGC.................................................................. 25 0 1 5.00 5 2 2 1 0 0 0 0 0 0
......................................................................................TCATGATTTATCAGGCGGCAAAGTGGA.......................................................... 27 0 1 4.00 4 0 4 0 0 0 0 0 0 0
......................................................................................TCATGATTTATCAGGCGGCAAAGT............................................................. 24 0 1 4.00 4 2 2 0 0 0 0 0 0 0
...........TGGTTACAAATGCTTACAATCAGA........................................................................................................................................ 24 0 4 3.00 12 7 1 4 0 0 0 0 0 0
................................................................................................TCAGGCGGCAAAGTGGAGTCTCGA................................................... 24 0 1 3.00 3 0 0 0 0 3 0 0 0 0
..........CTGGTTACAAATGCTTACAATCAGA........................................................................................................................................ 25 0 3 2.33 7 0 2 0 5 0 0 0 0 0
...............................................................................TTAAATATCATGATTTATCAGGC..................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0
................................................................................................TCAGGCGGCAAAGTGGAGTCTCGATG................................................. 26 0 1 2.00 2 0 0 0 1 0 1 0 0 0
.........................................................................................................................................CTTGATAACATAGACATATACGAG.......... 24 0 1 2.00 2 1 0 0 0 1 0 0 0 0
..............................................................................................TATCAGGCGGCAAAGTGGAGTCTC..................................................... 24 0 1 2.00 2 0 0 0 0 2 0 0 0 0
............................................................................................TTTATCAGGCGGCAAAGTGGAGTCTC..................................................... 26 0 1 2.00 2 0 0 0 0 2 0 0 0 0
.........................................................................................................................................CTTTATAACATAGACATATACGAGGA........ 26 1 1 2.00 2 0 2 0 0 0 0 0 0 0
..................................................................................AATATCATGATTTATCAGGCGGC.................................................................. 23 0 1 2.00 2 0 0 0 1 1 0 0 0 0
.........................................................................................................AAAGTGGAGTCTCGATGTCGACAA.......................................... 24 0 1 2.00 2 0 0 2 0 0 0 0 0 0
.........................................................................................TGATTTATCAGGCGGCAAAGTGGAGT........................................................ 26 0 1 2.00 2 0 1 0 1 0 0 0 0 0
.........................................................................................TGATTTATCAGGCGGCAAAGTGGA.......................................................... 24 0 1 2.00 2 1 0 0 1 0 0 0 0 0
......................................................................................................GGCAAAGTGGAGTCTCGATGTCGACA........................................... 26 0 1 2.00 2 0 0 2 0 0 0 0 0 0
..........................................................................................................AAGTGGAGTCTCGATGTCGACAACGCA...................................... 27 0 1 2.00 2 0 0 0 0 2 0 0 0 0
.........................................................................................TGATTTATCAGGCGGCAAAGTGGAGTC....................................................... 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0
...............TACAAATGCTTACAATCAGATGCCACC................................................................................................................................. 27 0 4 1.25 5 0 1 0 0 0 0 4 0 0
.............................................................................................TTATCAGGCGGCAAAGTGGAGTCTC..................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0
..........CTGGTTACAAATGCTTAC............................................................................................................................................... 18 0 3 1.00 3 0 0 0 0 3 0 0 0 0
................................................................................................TCAGGCGGCAAAGTGGAGTCTCGATGTC............................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................................TATCATGATTTATCAGGCGGCAAAG.............................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................CTTGATAACATAGAAATATACGAGGA........ 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................TAGACATATACGAGGACGCC.... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................CTTGATAACATAGACATATACGAGGACGCCC... 31 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................TGGAGTCTCGATGTCGACAACGCA...................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................................TCAGGCGGCAAAGTGGAGTCTC..................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0
................................................................................................TCAGGCGGCAAAGTGGAGT........................................................ 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0
..................................................................................AATATCATGATTTATCAGGCGGCA................................................................. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0
..................................................................................AATATCATGATTTATCAGGCGGCAAAGA............................................................. 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................CTTGATAACATAGACATA................ 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0
......................................................................................................GGCAAAGTGGAGTCTC..................................................... 16 0 1 1.00 1 0 0 0 0 1 0 0 0 0
......................................................................................TCATGATTTATCAGGCGGCAAAGTG............................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................................................AAAGTGGAGTCTCGATGTCGACAACGC....................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0
....................................................................................................................TCGATGTCGACAACGCAA..................................... 18 0 4 1.00 4 0 0 0 0 0 0 4 0 0
..........................................................................................................AAGTGGAGTCTCGATGTCGACAACG........................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...............................................................................................ATCAGGCGGCAAAGTGGAGTC....................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.............................................................................TGTTAAATATCATGATTTATCAGTCGGC.................................................................. 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0
...............................................................................TTAAATATCATGATTTATCGGGCGGA.................................................................. 26 2 1 1.00 1 0 0 1 0 0 0 0 0 0
.................................................................................AAATATCATGATTTATCAGGCGGCAT................................................................ 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................TTGATAACATAGACATATACGAGGACG...... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................ATCCTTGATAACATAGACATATACGA........... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................TGATAACATAGACATATACGAGGACGCCCA.. 30 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................TGATAACATAGACATATACGAGGACT...... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................................................................AGGCGGCAAAGTGGAGTCTC..................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.............................................................................TGTTAAATATCATGATTTATCAGG...................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................................................AAAGTGGAGTCTCGATGTCGACAACG........................................ 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.............................................................................................................TGGAGTCTCGATGTCGACAACGCAAA.................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.............................................................................................................................................ATAACATAGACATATACGAGGA........ 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.............................................................................................................TGGAGTCTCGATGTCGACAAC......................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0
..................................................................................................................TCTCGATGTCGACAACGCAAAT................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................TCATGATTTATCAGGCGGCAAAGTGGAGT........................................................ 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................................................AATATCATGATTTATCAGGCGGCAA................................................................ 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.................................................................................AAATATCATGATTTATCAGGCGGCA................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................ATTGATAACATAGACATATACGA........... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................CATAGACATATACGAGG......... 17 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.........................................................................................................................................CTTGATAACATAGACATATACGAGGAC....... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................................................................................TGATTTATCAGGCGGCAAAGTGGAG......................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.................................................................................................................GTCTCGATGTCGACAACGC....................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0
................................................................................................................AGTCTCGATGTCGACAACGCAAA.................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................TGATAACATAGACATATACGAGGA........ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................................................................ATGATTTATCAGGCGGCAAAGTGGAG......................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
......................................................................TACGTAATGTTAAATATCATGATT............................................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................ATCCTTGATAACATAGACATATACGAGGA........ 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................ATTGATAACATAGACATATACGAGGA........ 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................................................CGGCAAAGTGGAGTCTCGATGTCGAC............................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................CTTGATAACATAGACATATACGTGGA........ 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0
......................................CACCTTCACCAACATCAATCCGCTT............................................................................................................ 25 0 4 0.75 3 0 0 0 0 3 0 0 0 0
CAGAATATAACTGGTTACAAATGCT.................................................................................................................................................. 25 0 2 0.50 1 0 0 0 1 0 0 0 0 0
..................................................................ATTCTACGTAATGTTAAATATCATG................................................................................ 25 0 2 0.50 1 0 0 0 0 0 1 0 0 0
..........................................TTCACCAACATCAATCCGCTTTGC......................................................................................................... 24 0 4 0.50 2 0 1 0 0 0 0 0 0 1
..................................................................ATTCTACGTAATGTTAAATATC................................................................................... 22 0 2 0.50 1 0 0 0 0 0 0 0 1 0
..................................................................ATTCTACGTAATGTTAAATATCATGA............................................................................... 26 0 2 0.50 1 0 0 0 1 0 0 0 0 0
.....................TGCTTACAATCAGATGCCACTTT............................................................................................................................... 23 1 4 0.50 2 0 0 0 2 0 0 0 0 0
....................................................................................................................TCGATGTCGACAACGCAAATCCTTGATA........................... 28 0 4 0.50 2 0 0 2 0 0 0 0 0 0
............................................CACCAACATCAATCCGCTTTGCATTC..................................................................................................... 26 0 4 0.50 2 0 0 0 0 0 2 0 0 0
.......................................................................................................GCAAAGTGGAGTCTCAA................................................... 17 1 3 0.33 1 0 0 0 0 1 0 0 0 0
........................................................TCCGCTTTGCATTCTACGTAATGTTA......................................................................................... 26 0 3 0.33 1 0 0 0 0 1 0 0 0 0
..................................................................................................AAGCGGCAAAGTGGAGT........................................................ 17 1 3 0.33 1 0 0 0 0 1 0 0 0 0
.......TAACTGGTTACAAATGCTTACAATCAGA........................................................................................................................................ 28 0 3 0.33 1 0 0 0 1 0 0 0 0 0
..............................................................TTGCATTCTACGTAATGTT.......................................................................................... 19 0 3 0.33 1 0 0 0 0 1 0 0 0 0
........................................................TCCGCTTTGCATTCTACGTAAAA............................................................................................ 23 2 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................................................ATTCTACGTAATGTT.......................................................................................... 15 0 4 0.25 1 0 0 0 0 1 0 0 0 0
.............................................ACCAACATCAATCCGCTTTGCATT...................................................................................................... 24 0 4 0.25 1 1 0 0 0 0 0 0 0 0
........................................................................................................................TGTCGACAACGCAAATCCTTGATA........................... 24 0 4 0.25 1 0 0 1 0 0 0 0 0 0
...................AATCCTTACAATCAGATGCCACCTT............................................................................................................................... 25 1 4 0.25 1 0 0 1 0 0 0 0 0 0
....................................................................................................................TCGATGTCGACAACGCAGATCCTTGA............................. 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0
....................................................................................................................TCGATGTCGACAACGCAAATCCTTGG............................. 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................CTTGATAACATAGACAT................. 17 0 4 0.25 1 0 0 0 0 1 0 0 0 0
....................................................................................................................TCGATGTCGATAACGCAAATCCTTGA............................. 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0
....................................................................................................................TCGATGTCGACAACGCAAATCCTTGATAACA........................ 31 0 4 0.25 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................GTCGACAACGCAAATC.................................. 16 0 4 0.25 1 0 1 0 0 0 0 0 0 0
...................................................................................................................CTCGATGTCGACAACGCAAATCCTTGA............................. 27 0 4 0.25 1 0 1 0 0 0 0 0 0 0
.............................................ACCAACATCAATCCGCTTTGCATTCTAC.................................................................................................. 28 0 4 0.25 1 1 0 0 0 0 0 0 0 0
..........................................TTCACCAACATCAATCCGCTTTG.......................................................................................................... 23 0 4 0.25 1 0 0 0 0 1 0 0 0 0
...............................................................................................................................AACGCAAATCCTTGATAACATAGACA.................. 26 0 4 0.25 1 0 0 0 1 0 0 0 0 0
....................................................................................................................TCGATGTCGACAACGCAAATC.................................. 21 0 4 0.25 1 0 0 0 0 0 0 0 1 0
............................................CACCAACATCAATCCGCTTTGCATTT..................................................................................................... 26 1 4 0.25 1 0 0 0 0 1 0 0 0 0
..........................................TTCACCAACATCAATCCGCTTTGCAT....................................................................................................... 26 0 4 0.25 1 0 0 0 0 1 0 0 0 0
....................ATGCTTACAATCAGATGCCACCTTC.............................................................................................................................. 25 0 4 0.25 1 0 0 0 0 1 0 0 0 0
......................................................................................................................GATGTCGACAACGCAAA.................................... 17 0 4 0.25 1 0 0 0 0 1 0 0 0 0
.....................................GCACCTTCACCAACATCAATCCGCTT............................................................................................................ 26 1 4 0.25 1 0 0 0 0 1 0 0 0 0
..........................................TTCACCAACATCAATCCGCTTTGCA........................................................................................................ 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0
...AATATAACTGGTTACATT...................................................................................................................................................... 18 2 9 0.22 2 0 0 2 0 0 0 0 0 0
.....................................................................................................................................................GACATATACGAGGACT...... 16 1 6 0.17 1 0 0 0 0 1 0 0 0 0
.................................................................................................CGGGCGGCAAAGTGGA.......................................................... 16 1 10 0.10 1 0 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 chr2h_Mrandom_017:16810-16980 - dsi_57 AATGGGCGTCCTCGTATATGTCTATGTTATCAAGGATTTGCGTTGTCGACATCGAGACTCCACTTTGCCGCC------------TGATAAATCATGATATTTAACATTACGTAGAATGCAAAGCGGATTGATGTTGGTGAAGGTGGCATCTGATTGTAAGCATTTGTAAC-CAGTTATATTCTG
droSec2 scaffold_5747:1204-1374 - AATGGGCGTCCTCGTCCATGTCTATGTTATCAAGGATTTGCGTTGTCGACATCGAGGCTCCACTTTGCCGCT------------TGATAAATCATGATATTTAACATTACGTAGAATGCAAAGCGGATTGATGTTGGTGAAGGTGGCATCTGATTGTAAGCATTTGTAAC-CAACTATATTCTG
dm3 chr3LHet:969367-969537 + AATGGGCGTCCTCGTCCATGTCTATGTTATCAAGGATTTGCGTTGTCGACATCGAGGCTCCACTTTGCAGCT------------TGATAAATCATGATATTTAACATTACGTAGAATGCAAAGCGGATTGATGTTGGTGAAGGTGGCATCTGATTGTAAGCATTTGTAAC-CAGTTATATTCTG
droEre2 scaffold_4845:119873-120043 - AATGGGCGTCCTCGTCCATGTCTATGTTATCAAGGATTTGCGTTACCGACATCGAGGCTCCACTTTGCCGCC------------TGATACATCATAATAATTAACATTACGTAGAATGCAAAGCAGATTGATGTTGCTGAAGGTGGCATCTGATTGTAAGCATTTGTAAC-CCGTTATATGCTG
droYak3 v2_chrUn_5709:213908-214072 - AATGTTCGACCTCG------TCTTTGTTATCAAGGATTTGCGTTACCGACATCGAGGCTCCACTTTGCCGCC------------TGATAAATCATTATATTAAACATTACGTAGAATGCAAATCAGATTGATGTAGGTGAAGGTAGCATCTGATTGTATGCATTTGTAAC-CCGTTATATGCTG
droEug1 scf7180000409214:9263-9446 - ATTGGACGTCCTCGGTGATATCCATGTTAGCAAGGATTTGCGTCACCACTATCGAAACCCTGCTTCACCGCCTATAGGTAAACCTGAAAAATCTTTATCTTTATCAATACGGATAACGCGAAGCAGGTTGACGATGCTGCAGCTGGCATTTTATTGTAAGCAATTGCGACTCCATTATATGCTG
droBia1 scf7180000301736:2171-2325 - TATGAACGTCCTCGGCCATATCCATATTGGCAAGGATTTGAATCACCACTATCGAGGCTCTGCTTCGCAGCC------------TGATAAATCTCTATCTTTATCAATATGCAGAACGCGAAGCAGTTGAACGCTGCTGCAGCTGGCATTTGGTTGTAAGCAATTGT-----------------
droTak1 scf7180000415223:13706-13835 - AATGGACGTCCTCGACCATGTCCATTTTAGAAAGGATTTGCGCCACCGGTATCGAGGCAGCGCTTCGCCGACTGT---------TGATAAGCCTTAAAAATCTTTGTTTCGCAGCACGCGAAACAGATTGACGCCGCTG---------------------------------------------
droFic1 scf7180000453544:29129-29300 + CATGGACGTCCTCGGCCATATCGATGTTAGCAAGGATTTGAGTCACCGCCATCTAGGCTTTGCTTCGCCGCC------------TGATAAATCTCTATCTTTATCAATACGCAGAACGCGAAGCAGTTTAACGCTGCAGCAGCTGGCATTTGGTTGTAAGCAATTGTGACTCCGTTATATGCTG
droKik1 scf7180000302471:1748177-1748333 + AATGGGCGTCCTCGGCCATGTCAATGTTAGCAAGGACTTGTGTTACCGCAATCGAAGCTCTGCTTT---------------------------TACATCTTTATTATTTCGCAGGACGTGAAGCAGATTGAAGCTGGTGCAGATGGCCTCTGATTGTCAGCATTTGCAACTCCGTTATATGCTG
droAna3 scaffold_13250:1794988-1795155 + AATGGACGTCCTCGGCCATATCCATGTTAGCAAGGA--------AGCACTATCAAGGCTTTGCTTCGCCGCCTGTG--------AGATAAATCTTTATCTTTATCAATACGCAGGGCGCGAAGAAATTTAACGCTGCTGCAGGTGGCATTTGGTTGTAAGCAATTGCCACTCTGTTATACGCTG
droBip1 scf7180000396677:45334-45505 + CATGGACGTCCTCGGCCATATCCATGTTAGCGAGGATTTGAGTCACCACTATCGAGACTCTGCTTCGCCGTC------------TGATAAATCTTTATCTTTATCGATACGCAGAACGCGAAGCCGATAAGCGCTGCTGCAGCTGGCATTTTGTTGTAGGTAATTGCAGCTCCGTTATATGCTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
AATGGGCGTCCTCGTATATGTCTATGTTATCAAGGATTTGCGTTGTCGACATCGAGACTCCACTTTGCCGCC------------TGATAAATCATGATATTTAACATTACGTAGAATGCAAAGCGGATTGATGTTGGTGAAGGTGGCATCTGATTGTAAGCATTTGTAAC-CAGTTATATTCTGSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
..........................................................................................................................................................TGTAAGCATTTGTAAC-CAGTTATA.....243106.0031800000001253168220
...........................................................................................................TACGTAGAATGCAAAGCGGATTGATG...................................................26378.67236203100211132014170
...........................................................................................................TACGTAGAATGCAAAGCGGATTGATGT..................................................27376.00228000170002812189144
........................TGTTATCAAGGATTTGCGTTGTCGAC......................................................................................................................................26465.5026200040019434922215
..............................................................................................................GTAGAATGCAAAGCGGATTGATGT..................................................24459.002360000001117251938
........................TGTTATCAAGGATTTGCGTTGTCGACA.....................................................................................................................................27457.7523100040001082165249
........................TGTTATCAAGGATTTGCGTTGTC.........................................................................................................................................23451.2520500000001012956118
...........................................................................................................TACGTAGAATGCAAAGCGGATTGAT....................................................25344.3313301462030000360
....................................................................................................................TGCAAAGCGGATTGATGTTGGTGAA...........................................25424.759900000013212241119
........................TGTTATCAAGGATTTGCGTTGTCGA.......................................................................................................................................25422.75910000002332119115
.........................................................................................................................................................TTGTAAGCATTTGTAAC-CAGTTATA.....25318.00540000000683550
...........................................................................................................TACGTAGAATGCAAAGCGGATTGA.....................................................24317.00510000600002043
..............................................................................................................GTAGAATGCAAAGCGGATTGATGTT.................................................25416.00640000000047179
....................................................................................................................TGCAAAGCGGATTGATGTTGGTGAAGG.........................................27415.506200000022572251
........................TGTTATCAAGGATTTGCGTTGTCG........................................................................................................................................24412.004800000001471287
.............................................................................................................CGTAGAATGCAAAGCGGATTGATGT..................................................25310.003000000000411312
...................................................TCGAGACTCCACTTTGCCGCC------------TGA.................................................................................................2419.009000010111302
..............................................................................................................GTAGAATGCAAAGCGGATTGATG...................................................2349.00360000000028017
....................................................................................................................TGCAAAGCGGATTGATGTTGGTGA............................................2448.25330000000136905
......................TATGTTATCAAGGATTTGCGTTGTC.........................................................................................................................................2548.003200000001141043
.............................................................................................................CGTAGAATGCAAAGCGGATTGATG...................................................2437.67230000000081221
..............................................................................................................GTAGAATGCAAAGCGGATTGATGTTG................................................2647.50300000000019236
...........................................................................................................TACGTAGAATGCAAAGCG...........................................................1836.33190000000000019
...........................TATCAAGGATTTGCGTTGTCGACATC...................................................................................................................................2646.25250001000410523
.....................................................................................................TAACATTACGTAGAATGCAAAGCGGA.........................................................2636.0018000000077310
...........................................................................................................TACGTAGAATGCAAAGCGGATTG......................................................2336.0018000130301217
............................................................................................CATGATATTTAACATTACGTAGAAT...................................................................2525.5011000000080120
......................................................................................................................................TGGTGAAGGTGGCATCTGATTGTA..........................2445.25210000000001218
...............................AAGGATTTGCGTTGTCGACATCGAGAC..............................................................................................................................2715.005000000021110
...............................AAGGATTTGCGTTGTCGACATCGAGA...............................................................................................................................2615.005000000020300
.....................................................GAGACTCCACTTTGCCGCC------------TGATAAATCA..........................................................................................2915.005000000041000
...........................................................................................................TACGTAGAATGCAAAGCGGATT.......................................................2235.0015000500100108
........................TGTTATCAAGGATTTGCGTTGTCGACAT....................................................................................................................................2844.7519000000053524
...........................................................................................................TACGTAGAATGCAAAGCGGA.........................................................2034.67140001000000013
............................................................................................................ACGTAGAATGCAAAGCGGATTGATGT..................................................2634.6714000000041117
...................................................TCGAGACTCCACTTTGCCGCC------------....................................................................................................2114.004000100002001
.............................TCAAGGATTTGCGTTGTCGACATCGAGA...............................................................................................................................2814.004000000020110
..........................................................TCCACTTTGCCGCC------------TGATAAATCATGA.......................................................................................2714.004000000012010
..............................................................................................TGATATTTAACATTACGTAGAATGC.................................................................2524.008000000020330
....................................................................................................................TGCAAAGCGGATTGATGTTGGTGAAGGT........................................2843.7515000000057300
............................................................................................................ACGTAGAATGCAAAGCGGATTGATG...................................................2533.6711000000062300
....................................................................................................................TGCAAAGCGGATTGATGTTGGTGAAG..........................................2643.5014000000052520
........................TGTTATCAAGGATTTGCGTTGTCGACATC...................................................................................................................................2943.2513000000130900
...................................................TCGAGACTCCACTTTGCCGCC------------TGATA...............................................................................................2613.003000000020100
................TATGTCTATGTTATCAAGGATTTGCGT.............................................................................................................................................2713.003000000000030
...................................................TCGAGACTCCACTTTGCCGCC------------TGATAA..............................................................................................2713.003000200000100
.......................................................................................TAAATCATGATATTTAACATTACGTAGA.....................................................................2813.003000000011010
.......................................................................................TAAATCATGATATTTAACATTACGTAGAA....................................................................2913.003000000002010
...........TCGTATATGTCTATGTTATCAAGGA....................................................................................................................................................2513.003000000001020
...............................................................................................................TAGAATGCAAAGCGGATTGATGTTGGT..............................................2743.0012000000042402
...........TCGTATATGTCTATGTTATCAAGGATT..................................................................................................................................................2713.003000000001110
................................AGGATTTGCGTTGTCGACATCGAGAC..............................................................................................................................2613.003000000012000
..TGGGCGTCCTCGTATATGTCTA................................................................................................................................................................2213.003000000000003
......................................................................................................................................TGGTGAAGGTGGCATCTGATTGTAA.........................2543.0012000000011217
.............................TCAAGGATTTGCGTTGTCGACATCGAGAC..............................................................................................................................2913.003000000021000
...........................TATCAAGGATTTGCGTTGTCGACATCGA.................................................................................................................................2842.7511000000043310
.............................TCAAGGATTTGCGTTGTCGACATC...................................................................................................................................2442.7511000000030206
...........................................................................................................TACGTAGAATGCAAAGCGG..........................................................1932.678000060000002
.................................................................................................TATTTAACATTACGTAGAATGCAAAGCGGA.........................................................3032.678000000043100
..........................................................................................................TTACGTAGAATGCAAAGCGGATTGATG...................................................2732.678000000061010
..........................................................................................................................................GAAGGTGGCATCTGATTGTAAGCATT....................2642.5010000000011314
............................................................................................CATGATATTTAACATTACGTAGAATGC.................................................................2722.505000000030101
.........................................................................................................................................TGAAGGTGGCATCTGATTGTAAGCAT.....................2642.259000000002007
.........................................................................................................................................TGAAGGTGGCATCTGATTGTAAGCA......................2542.259000000015012
......................................................................................................................................TGGTGAAGGTGGCATCTGATTGT...........................2342.259000000001008
..............TATATGTCTATGTTATCAAGGATT..................................................................................................................................................2412.002000000010010
............................................................................................CATGATATTTAACATTACGTAGAA....................................................................2422.004000000030100
..TGGGCGTCCTCGTATATGTCTATGT.............................................................................................................................................................2512.002000000000002
..................................................ATCGAGACTCCACTTTGCCGCC------------TGA.................................................................................................2512.002001000000100
...............................AAGGATTTGCGTTGTCGACATCGAGACTC............................................................................................................................2912.002000000010100
...................................................................................................................................TGTTGGTGAAGGTGGCATCTGATTG............................2542.008000000000008
...........................................TGTCGACATCGAGACTCCACTTTG.....................................................................................................................2412.002000000002000
.............GTATATGTCTATGTTATCAAGGATT..................................................................................................................................................2512.002000000000200
...................................................................................................TTTAACATTACGTAGAATGCAAAGCGGA.........................................................2832.006000000031110
...................................................TCGAGACTCCACTTTGCCGCC------------TGATAAA.............................................................................................2812.002000000000110
..............................................................................................................GTAGAATGCAAAGCGGATTGATGTTGGT..............................................2841.757000000007000
.................................................................................................................GAATGCAAAGCGGATTGATG...................................................2041.757000000000007
........................TGTTATCAAGGATTTGCGTTGT..........................................................................................................................................2241.757000000140200
....................................................................................................................TGCAAAGCGGATTGATGTTGGT..............................................2241.757000000030103
......................................................................................................................................TGGTGAAGGTGGCATCTGATTGTAAGC.......................2741.757000000011005
......................................................................................................................................TGGTGAAGGTGGCATCTGATTGTAAGCA......................2841.757000000123100
............................ATCAAGGATTTGCGTTGTCGACATC...................................................................................................................................2541.757100200021100
.....................................................................................................TAACATTACGTAGAATGCAAAGCGG..........................................................2531.675000000000302
...........................TATCAAGGATTTGCGTTGTCGACAT....................................................................................................................................2541.506000000014010
......................................................................................................................................TGGTGAAGGTGGCATCTGATTGTAAG........................2641.506000000000006
........................TGTTATCAAGGATTTGCGTTG...........................................................................................................................................2141.506000240000000
..............................................................................................TGATATTTAACATTACGTAGAATG..................................................................2421.503000000010110
............................................................................................CATGATATTTAACATTACGTAGAATG..................................................................2621.503000000020100
..........................................................................................................TTACGTAGAATGCAAAGCGGATTGATGT..................................................2831.334000000013000
.............................................................................................................CGTAGAATGCAAAGCGGATTGATGTT.................................................2631.334000000003010
.......................................................................................................................AAAGCGGATTGATGTTGGTGAAGGT........................................2541.255000000011201
.......................................................................................................................AAAGCGGATTGATGTTGGTGAAGG.........................................2441.255000000021011
......................................................................................................................................TGGTGAAGGTGGCATCTGATTGTAAGCAT.....................2941.255000000013100
..............................................................................................................GTAGAATGCAAAGCGGATTGATGTTGG...............................................2741.255000000004001
...................................................................................................................................TGTTGGTGAAGGTGGCATCTGATTGTA..........................2741.255000000001103
.........................................................................................................................................TGAAGGTGGCATCTGATTGTAAGCATT....................2741.255000000011003
........................TGTTATCAAGGATTTGCGTT............................................................................................................................................2041.255000040000001
.....................................................................................................................................TTGGTGAAGGTGGCATCTGATTGTA..........................2541.255000000001004
..............................................................................................................GTAGAATGCAAAGCGGATTGAT....................................................2241.255000000001004
.......GTCCTCGTATATGTCT.................................................................................................................................................................1611.001000000000001
..................................................ATCGAGACTCCACTTTGCCGCC------------....................................................................................................2211.001000100000000
..TGGGCGTCCTCGTATATGTCTATGTTA...........................................................................................................................................................2711.001000000000001
..............................................................................................TGATATTTAACATTACGTAGAATGCAAAG.............................................................2921.002000000000200
..............................................CGACATCGAGACTCCACTTTGCC...................................................................................................................2311.001000000000010
.................................................................................................TATTTAACATTACGTAGAATGCAAAGCGG..........................................................2931.003000000012000
................................AGGATTTGCGTTGTCGACATCGAGACTC............................................................................................................................2811.001000000010000
.....................................TTGCGTTGTCGACATCGAGACT.............................................................................................................................2211.001000000000001
..........................................................TCCACTTTGCCGCC------------TGATAAA.............................................................................................2111.001000000000001
...................................................TCGAGACTCCACTTTGCCGCC------------TGAT................................................................................................2511.001000000000001
......................................................................................................................................TGGTGAAGGTGGCATCTG................................1841.004000000000004
....................................................................................................................TGCAAAGCGGATTGATGTTGGTG.............................................2341.004000000030001
......................................TGCGTTGTCGACATCGAGACTCCACT........................................................................................................................2611.001000000001000
.....................................................GAGACTCCACTTTGCCGCC------------TGATAAA.............................................................................................2611.001000000000010
.ATGGGCGTCCTCGTATA......................................................................................................................................................................1711.001000000000001
...........TCGTATATGTCTATGTTATCAAGGAT...................................................................................................................................................2611.001000000000010
......................................TGCGTTGTCGACATCGAGACT.............................................................................................................................2111.001000000000100
...........................TATCAAGGATTTGCGTTGTCGACATCGAGAC..............................................................................................................................3111.001000000001000
.................................................................................................................GAATGCAAAGCGGATTGATGTTGGT..............................................2541.004000000001102
......................................................................................................................................TGGTGAAGGTGGCATC..................................1641.004000000000004
...................................................TCGAGACTCCACTTTGCCGC.................................................................................................................2011.001000000000001
........................TGTTATCAAGGATTTGCGT.............................................................................................................................................1941.004000040000000
...........................TATCAAGGATTTGCGTTGTCGACATCGAGA...............................................................................................................................3011.001000000001000
.......GTCCTCGTATATGTCTA................................................................................................................................................................1711.001000000000001
...........................................................................................................TACGTAGAATGCAAAGCGGAT........................................................2131.003000100000002
.......................................................................................TAAATCATGATATTTAACATTACGTA.......................................................................2611.001000000001000
..............................................................................................TGATATTTAACATTACGTAGAAT...................................................................2321.002000000000200
............................ATCAAGGATTTGCGTTGTCGACATCGAGA...............................................................................................................................2911.001000000001000
......................................................................................................................................TGGTGAAGGTGGCATCTGATT.............................2141.004000000000004
..............................................................................................TGATATTTAACATTACGTAGAATGCA................................................................2621.002000000010100
......................................TGCGTTGTCGACATCGAGACTCCAC.........................................................................................................................2511.001000000001000
.......GTCCTCGTATATGTCTATGTTATCAAGGA....................................................................................................................................................2911.001000000000100
................................................................................................................................TGATGTTGGTGAAGGTGGCATCTG................................2441.004000000000004
.........................................................CTCCACTTTGCCGCC------------TGATAAATCA..........................................................................................2511.001000000001000
..............................................................................................TGATATTTAACATTACGTAGAATGCAAA..............................................................2821.002000000010010
...........................TATCAAGGATTTGCGTTGTCGACA.....................................................................................................................................2441.004000000004000
...............................................................................................................................TTGATGTTGGTGAAGGTGGCATCTGAT..............................2741.004000000010102
.....................................................................................................................................................CTGATTGTAAGCATTTGTAAC-CAGT.........2531.003000030000000
..........................................................................................................TTACGTAGAATGCAAAGCGGATTGA.....................................................2531.003000200000100
......................................TGCGTTGTCGACATCGAGACTCCA..........................................................................................................................2411.001000000001000
................................AGGATTTGCGTTGTCGACATCGAGA...............................................................................................................................2511.001000000001000
....................................................................................................................................................................TGTAAC-CAGTTATATTCT.1821.002000020000000
.................................................................TGCCGCC------------TGATAAATCATGATATT...................................................................................2411.001000000001000
.................................................................................................TATTTAACATTACGTAGAATGCAAAGC............................................................2731.003000000000210
...............................................GACATCGAGACTCCACTTTGCCGCC------------....................................................................................................2511.001000000100000
.....................................TTGCGTTGTCGACATCGAG................................................................................................................................1941.004000004000000
......................................................AGACTCCACTTTGCCGCC------------TGATAAATCA..........................................................................................2811.001000000001000
..............................CAAGGATTTGCGTTGTCGACATCGAGAC..............................................................................................................................2811.001000000010000
.............................TCAAGGATTTGCGTTGTCGACATCGA.................................................................................................................................2640.753000000010110
...............................AAGGATTTGCGTTGTCGACATC...................................................................................................................................2240.753000000000003
.................................................................................................................GAATGCAAAGCGGATTGAT....................................................1940.753000000000003
......................................................................................................................................TGGTGAAGGTGGCATCTGA...............................1940.753000000001002
...............................................................................................................................TTGATGTTGGTGAAGGTGGCATCTG................................2540.753000000000003
.........................................................................................................................AGCGGATTGATGTTGGTGAAGGTGGCA....................................2740.753000000021000
.................................................................................................................GAATGCAAAGCGGATTGATGT..................................................2140.753000000000003
.........................................................................................................................AGCGGATTGATGTTGGTGAAGGTG.......................................2440.753000000000300
.........................................................................................................................AGCGGATTGATGTTGGTGAAGG.........................................2240.753000000000300
.........................................................................................................................................TGAAGGTGGCATCTGATTGTAAGC.......................2440.753000000001002
................................................................................................................................TGATGTTGGTGAAGGTGGC.....................................1940.753000000010002
...................................................................................................................................TGTTGGTGAAGGTGGCATCTGAT..............................2340.753000000000003
..............................................................................................................GTAGAATGCAAAGCGGATTGA.....................................................2140.753000000001011
...................................................................................................................................................ATCTGATTGTAAGCATTTGTAAC-CAGT.........2730.672000000000101
...........................................................................................................TACGTAGAATGCAAAGC............................................................1730.672000000000002
...........................................................................................................TACGTAGAATGCAAAG.............................................................1630.672000000000002
...........................................................................................................TACGTAGAATGCAAAGCGGATTGATGTT.................................................2830.672000000000101
......................................................................................................................................................TGATTGTAAGCATTTGTAAC-CAGT.........2430.672000000000101
...................................................................................................TTTAACATTACGTAGAA....................................................................1730.672000000000002
.............................................................................................................CGTAGAATGCAAAGCGGATTGATGTTG................................................2730.672000000000110
....................................................................................................TTAACATTACGTAGAATGCAAAGCGGAT........................................................2830.672000000001100
..........................................................................................................TTACGTAGAATGCAAAGCGGATTG......................................................2430.672000000010001
......................................................................................................................................................TGATTGTAAGCATTTGTAAC-CAGTTA.......2630.672000000010100
.....................................................................................................TAACATTACGTAGAATGCAAAGCGGAT........................................................2730.672000000010100
............................................................................................................ACGTAGAATGCAAAGCGGATTGATGTT.................................................2730.672000000020000
....................................................................................................TTAACATTACGTAGAATGCAAAGCGGA.........................................................2730.672000000000020
...........................................................................................TCATGATATTTAACATTACGTAGAATGC.................................................................2820.501000000100000
...............................................................................................................................TTGATGTTGGTGAAGGTGGC.....................................2040.502000000000002
..........................................................................................................................................GAAGGTGGCATCTGATTGTAAGCA......................2440.502000000011000
..............................................................................................TGATATTTAACATTACGTAGAATGCAA...............................................................2720.501000000010000
......................TATGTTATCAAGGATTTGCGTTGT..........................................................................................................................................2440.502000000000020
........................................................................................................................AAGCGGATTGATGTTGGTGAAGGT........................................2440.502000000010001
..............................................................................................TGATATTTAACATTACGTA.......................................................................1920.501000000000010
..........................................................................................................................GCGGATTGATGTTGGTGAAGGTGGCA....................................2640.502000000020000
....................................................................................................................TGCAAAGCGGATTGATGT..................................................1840.502000000000002
..........................................................................................................................................GAAGGTGGCATCTGATTGTAAGCAT.....................2540.502000000000002
..........................TTATCAAGGATTTGCGTTGTCGACA.....................................................................................................................................2540.502000000000110
..........................................................................................................................................................TGTAAGCATTTGTAAC-CAGTTATATT...2620.501000000000100
...............................................................................................................................TTGATGTTGGTGAAGGTGGCATC..................................2340.502000000000101
..........................TTATCAAGGATTTGCGTTGTCGACATC...................................................................................................................................2740.502000000011000
...............................................................................................................TAGAATGCAAAGCGGATTGATGT..................................................2340.502000000000011
.............................TCAAGGATTTGCGTTGTCGACAT....................................................................................................................................2340.502000000001010
............................ATCAAGGATTTGCGTTGTCGACATCGA.................................................................................................................................2740.502000000001100
..........................................................................................................................................................TGTAAGCATTTGTAAC-CAGTTATATTC..2720.501000000000100
..............................................................................................TGATATTTAACATTACGTAGAATGCAAAGC............................................................3020.501000000000100
...........................................................................................................................................AAGGTGGCATCTGATTG............................1740.502000000000002
...................................................................................................................................TGTTGGTGAAGGTGGC.....................................1640.502000000000002
.........................................................................................................................................................TTGTAAGCATTTGTAAC-CAGTTATATTC..2820.501000000100000
..........................TTATCAAGGATTTGCGTTGTCGAC......................................................................................................................................2440.502000000010100
......................TATGTTATCAAGGATTTGCGTTGTCGA.......................................................................................................................................2740.502000000001010
................................................................................................................................TGATGTTGGTGAAGGTGGCATCTGAT..............................2640.502000000000101
............................ATCAAGGATTTGCGTTGTCGACATCG..................................................................................................................................2640.502000000000110
............................................................................................CATGATATTTAACATTACGTAGA.....................................................................2320.501000000010000
................................................................................................................................TGATGTTGGTGAAGGTG.......................................1740.502000000000002
..........................................................................................................TTACGTAGAATGCAAAGC............................................................1830.331000000000010
..........................................................................................................TTACGTAGAATGCAAAGCGGATTGAT....................................................2630.331000000001000
........................................................................................................CATTACGTAGAATGCAAAGCGGATTGA.....................................................2730.331000000000010
.....................................................................................................TAACATTACGTAGAATGCAAAGCGGATT.......................................................2830.331000000000100
...................................................................................................TTTAACATTACGTAGAATGCAAAGC............................................................2530.331000000000100
......................................................................................................................................................TGATTGTAAGCATTTGTAAC-CAGTTATA.....2830.331000000000100
......................................................................................................................................................TGATTGTAAGCATTTGTAAC-CAGTTAT......2730.331000000000100
.............................................................................................................CGTAGAATGCAAAGCGGATTGATGTTGG...............................................2830.331000000000100
.........................................................................................................ATTACGTAGAATGCAAAGCGGA.........................................................2230.331000000000001
............................................................................................................ACGTAGAATGCAAAGCGGATTGAT....................................................2430.331000000010000
...........................................................................................................TACGTAGAATGCAAA..............................................................1530.331000000000001
..................................................................................................................................ATGTTGGTGAAGGTGGCATCTG................................2240.251000000000001
.........................................................................................................................................TGAAGGTGGCATCTG................................1540.251000000000001
....................................................................................................................TGCAAAGCGGATTGATG...................................................1740.251000000000001
..............................................................................................................................................GTGGCATCTGATTGTAA.........................1740.251000000000001
..................................................................................................................AATGCAAAGCGGATTGATGTTGGT..............................................2440.251000000000001
droSec2
AATGGGCGTCCTCGTCCATGTCTATGTTATCAAGGATTTGCGTTGTCGACATCGAGGCTCCACTTTGCCGCT------------TGATAAATCATGATATTTAACATTACGTAGAATGCAAAGCGGATTGATGTTGGTGAAGGTGGCATCTGATTGTAAGCATTTGTAAC-CAACTATATTCTGSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
...........................................................................................................TACGTAGAATGCAAAGCGGATTGATG...................................................26141.432011261
........................TGTTATCAAGGATTTGCGTTGTC.........................................................................................................................................23161.00162419
...........................................................................................................TACGTAGAATGCAAAGCGGATTG......................................................23150.931400014
...........................................................................................................TACGTAGAATGCAAAGCGGATTGATGT..................................................27140.93131516
.........................................................................................................................................TGAAGGTGGCATCTGATTGTAAGCATT....................2730.6720002
...........................................................................................................TACGTAGAATGCAAAGCGGATT.......................................................22150.67100109
...........................................................................................................TACGTAGAATGCAAAGCGGATTGA.....................................................24150.67100307
...........................................................................................................TACGTAGAATGCAAAGCGGATTGAT....................................................25140.5070502
........................TGTTATCAAGGATTTGCGTTGTCGA.......................................................................................................................................25160.3860105
........................TGTTATCAAGGATTTGCGTTG...........................................................................................................................................21160.3151112
........................TGTTATCAAGGATTTGCGTTGTCGAC......................................................................................................................................26160.2540004
.........................................................................................................................................TGAAGGTGGCATCTGATTGTAAGCAT.....................2650.2010100
........................TGTTATCAAGGATTTGCGTTGT..........................................................................................................................................22160.1931002
......................................................................................................................................TGGTGAAGGTGGCATCTGATTGT...........................2360.1710001
...................................................TCGAGGCTCCACTTTGCCGCT------------TGA.................................................................................................2470.1410001
..........................................................TCCACTTTGCCGCT------------TGATAAATCATGAT......................................................................................2870.1410001
..........................................................TCCACTTTGCCGCT------------TGATAAATCATGA.......................................................................................2770.1410001
........................TGTTATCAAGGATTTGCGTTGTCGACA.....................................................................................................................................27160.1320101
........................TGTTATCAAGGATTTGCGTTGTCG........................................................................................................................................24160.1320002
.........................GTTATCAAGGATTTGCGTTGTC.........................................................................................................................................22160.1320002
............................................................................................................ACGTAGAATGCAAAGCGGATTGA.....................................................23160.1320002
............................................................CACTTTGCCGCT------------TGATAAATCATGATA.....................................................................................27100.1010001
...........................................................................................................TACGTAGAATGCAAAGCGGATTGATGTT.................................................28120.0810001
......................................................................................................................................TGGTGAAGGTGGCATCTGAT..............................20130.0810001
...............................................................................................................TAGAATGCAAAGCGGATTGATGTTGG...............................................26130.0810010
...................................................................................................TTTAACATTACGTAGAATGCAAAGCGG..........................................................27150.0710001
...........................TATCAAGGATTTGCGTTGTCGACATC...................................................................................................................................26160.0611000
........................TGTTATCAAGGATTTGCGTTGTCGACATC...................................................................................................................................29160.0610001
.............................................................................................................CGTAGAATGCAAAGCGGATTG......................................................21160.0610001
........................TGTTATCAAGGATTTGCGTT............................................................................................................................................20160.0610001
droEre2
AATGGGCGTCCTCGTCCATGTCTATGTTATCAAGGATTTGCGTTACCGACATCGAGGCTCCACTTTGCCGCC------------TGATACATCATAATAATTAACATTACGTAGAATGCAAAGCAGATTGATGTTGCTGAAGGTGGCATCTGATTGTAAGCATTTGTAAC-CCGTTATATGCTGSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
No Reads
droYak3
AATGTTCGACCTCG------TCTTTGTTATCAAGGATTTGCGTTACCGACATCGAGGCTCCACTTTGCCGCC------------TGATAAATCATTATATTAAACATTACGTAGAATGCAAATCAGATTGATGTAGGTGAAGGTAGCATCTGATTGTATGCATTTGTAAC-CCGTTATATGCTGSizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
...........................TATCAAGGATTTGCGTTACCGACATC...................................................................................................................................2611.0010000010
....TTCGACCTCG------TCTTTGTTATCAAGGATT..................................................................................................................................................2811.0010000010
droEug1
ATTGGACGTCCTCGGTGATATCCATGTTAGCAAGGATTTGCGTCACCACTATCGAAACCCTGCTTCACCGCCTATAGGTAAACCTGAAAAATCTTTATCTTTATCAATACGGATAACGCGAAGCAGGTTGACGATGCTGCAGCTGGCATTTTATTGTAAGCAATTGCGACTCCATTATATGCTGSizeHit CountTotal NormTotal
No Reads
droBia1
TATGAACGTCCTCGGCCATATCCATATTGGCAAGGATTTGAATCACCACTATCGAGGCTCTGCTTCGCAGCC------------TGATAAATCTCTATCTTTATCAATATGCAGAACGCGAAGCAGTTGAACGCTGCTGCAGCTGGCATTTGGTTGTAAGCAATTGT-----------------SizeHit CountTotal NormTotal
No Reads
droTak1
AATGGACGTCCTCGACCATGTCCATTTTAGAAAGGATTTGCGCCACCGGTATCGAGGCAGCGCTTCGCCGACTGT---------TGATAAGCCTTAAAAATCTTTGTTTCGCAGCACGCGAAACAGATTGACGCCGCTG---------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CATGGACGTCCTCGGCCATATCGATGTTAGCAAGGATTTGAGTCACCGCCATCTAGGCTTTGCTTCGCCGCC------------TGATAAATCTCTATCTTTATCAATACGCAGAACGCGAAGCAGTTTAACGCTGCAGCAGCTGGCATTTGGTTGTAAGCAATTGTGACTCCGTTATATGCTGSizeHit CountTotal NormTotal
No Reads
droKik1
AATGGGCGTCCTCGGCCATGTCAATGTTAGCAAGGACTTGTGTTACCGCAATCGAAGCTCTGCTTT---------------------------TACATCTTTATTATTTCGCAGGACGTGAAGCAGATTGAAGCTGGTGCAGATGGCCTCTGATTGTCAGCATTTGCAACTCCGTTATATGCTGSizeHit CountTotal NormTotal
No Reads
droAna3
AATGGACGTCCTCGGCCATATCCATGTTAGCAAGGA--------AGCACTATCAAGGCTTTGCTTCGCCGCCTGTG--------AGATAAATCTTTATCTTTATCAATACGCAGGGCGCGAAGAAATTTAACGCTGCTGCAGGTGGCATTTGGTTGTAAGCAATTGCCACTCTGTTATACGCTGSizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
..........................................................................................................................................................TGTAAGCAATTGCCACTCTGTTATACGC..2811.001000010
......................................................................................................ATCAATACGCAGGGCGCGAAGA............................................................2211.001000010
..............................................................................................................................TTTAACGCTGCTGCAGGTGGCATTTGGT..............................2860.171000010
droBip1
CATGGACGTCCTCGGCCATATCCATGTTAGCGAGGATTTGAGTCACCACTATCGAGACTCTGCTTCGCCGTC------------TGATAAATCTTTATCTTTATCGATACGCAGAACGCGAAGCCGATAAGCGCTGCTGCAGCTGGCATTTTGTTGTAGGTAATTGCAGCTCCGTTATATGCTGSizeHit CountTotal NormTotal
No Reads

Generated: 12/06/2013 at 02:29 PM