ID:

dsi_46

 Coordinate:

chrU_M_3373:12453-12503 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.3 -23.2 -22.9 -22.5

Flybase annnotation

intergenic

Repeatable elements

NameClassFamily
Gypsy1-I_DM-intLTRGypsy

Sense Strand Reads

TGTATATTTGTTTCTCTTAATGGAAACCCGCCCCCCACAGGCCCTTCTCCTTGTTGTTACTTAGCTGGGCAGCGGCTCTGCTCACTGAGTCTTCGGCCAGTGCCTTCAAAGCGGCGACTCAGCCCCCGCGTCCCCCTCGCAGTACGGTTTG
***********************************....((((((...(((.((((.....)))).))).)).))))((((((((((.(((...)))))))).......))))).************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553487
Ovary		 SRR618934
Ovary		 SRR553488
Ovary		 SRR553485
Ovary		 SRR553486
Ovary		 M025
embryo
 M053
Female-body		 GSM343915
embryo
 O002
Head
 M023
head
............................................................................TCTGCTCACTGAGTCTTCGGCCAG................................................... 24 0 5 71.60 358 93 8 49 65 34 103 5 1 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGGC........................................................................... 26 0 5 65.40 327 70 17 60 78 87 0 12 3 0 0
..................................................TTGTTGTTACTTAGCTGGGCAG............................................................................... 22 0 5 42.40 212 93 0 60 30 29 0 0 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCCA.................................................... 23 0 5 20.40 102 23 6 26 26 21 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGC.............................................................................. 23 0 5 18.60 93 33 9 21 10 17 0 3 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCCAGT.................................................. 25 0 4 16.75 67 23 13 6 14 9 1 1 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGG............................................................................ 25 0 5 12.00 60 5 20 18 3 8 0 4 2 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCCAGTGCC............................................... 28 0 4 11.00 44 9 11 7 3 2 7 5 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCA................................................................................ 21 0 5 8.40 42 20 2 4 9 7 0 0 0 0 0
...................................................TGTTGTTACTTAGCTGGGCAGCGGC........................................................................... 25 0 5 6.60 33 5 9 5 5 9 0 0 0 0 0
...............................................TCCTTGTTGTTACTTAGCTGGGCAGCGGC........................................................................... 29 0 5 6.20 31 7 0 11 2 10 0 1 0 0 0
.........................................................................................TCTTCGGCCAGTGCCTTCAAAGCGGC.................................... 26 0 3 5.67 17 1 0 0 10 6 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGC................................................................................. 20 0 5 5.00 25 1 2 2 8 9 1 0 2 0 0
......................................................TGTTACTTAGCTGGGCAGCGGCTCTG....................................................................... 26 0 5 4.80 24 1 13 4 2 1 1 1 1 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCCAGTGC................................................ 27 0 4 4.00 16 5 2 7 1 0 0 1 0 0 0
...........................................................................................TTCGGCCAGTGCCTTCAAAGCGGCGA.................................. 26 0 3 3.67 11 5 3 3 0 0 0 0 0 0 0
........................................................................................................TTCAAAGCGGCGACTCAGCCCCCGCGTC................... 28 0 4 3.50 14 0 8 1 0 0 0 5 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCG............................................................................. 24 0 5 3.00 15 3 5 3 0 0 0 4 0 0 0
...........................................................................................TTCGGCCAGTGCCTTCAAAGCGGC.................................... 24 0 3 2.67 8 0 2 0 1 4 0 0 1 0 0
.....................................................................................TGAGTCTTCGGCCAGTGCCTTCAAAG........................................ 26 0 4 2.25 9 0 6 2 0 0 0 1 0 0 0
......................................................TGTTACTTAGCTGGGCAGCGGCTC......................................................................... 24 0 5 2.20 11 0 10 0 0 0 0 1 0 0 0
......................................................TGTTACTTAGCTGGGCAGCGG............................................................................ 21 0 5 2.20 11 1 8 1 0 1 0 0 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCCAGTGCCT.............................................. 29 0 4 2.00 8 0 0 0 0 0 8 0 0 0 0
.........................................................TACTTAGCTGGGCAGCGGCTCTGCT..................................................................... 25 0 5 2.00 10 0 8 0 1 0 0 1 0 0 0
.....................................................................................TGAGTCTTCGGCCAGTGCCTTCAAAGC....................................... 27 0 4 2.00 8 0 4 0 1 1 0 2 0 0 0
..................................................TTGTTGTTACTTAGCTGG................................................................................... 18 0 5 1.60 8 5 1 2 0 0 0 0 0 0 0
......................................................TGTTACTTAGCTGGGCAGCGGCTCTGC...................................................................... 27 0 5 1.60 8 0 2 0 0 6 0 0 0 0 0
..............................................................................TGCTCACTGAGTCTTCGGCCAGTGCC............................................... 26 0 4 1.50 6 0 4 1 0 0 0 1 0 0 0
......................................................TGTTACTTAGCTGGGCAGCGGCTCT........................................................................ 25 0 5 1.40 7 1 1 3 1 1 0 0 0 0 0
...........................................................................................TTCGGCCAGTGCCTTCAAAGCGG..................................... 23 0 3 1.33 4 2 1 0 1 0 0 0 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCC..................................................... 22 0 5 1.20 6 2 0 0 1 3 0 0 0 0 0
......................................................TGTTACTTAGCTGGGCAGCGGC........................................................................... 22 0 5 1.20 6 0 5 0 0 0 0 1 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGC...................................................... 21 0 5 1.20 6 2 1 0 3 0 0 0 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCCAGTG................................................. 26 0 4 1.00 4 2 1 0 1 0 0 0 0 0 0
.............................................................................................CGGCCAGTGCCTTCAAAGCGGCGA.................................. 24 0 3 1.00 3 0 2 0 0 1 0 0 0 0 0
......................................................TGTTACTTAGCTGGGCAGCGGCT.......................................................................... 23 0 5 1.00 5 0 3 0 0 0 2 0 0 0 0
TGTATATTTGTTTCTCTTAATGGAA.............................................................................................................................. 25 0 2 1.00 2 0 0 0 2 0 0 0 0 0 0
TGTATATTTGTTTCTCTTAATGGA............................................................................................................................... 24 0 2 1.00 2 0 0 2 0 0 0 0 0 0 0
..............................................CTCCTTGTTGTTACTTAGCTGGGCAGCGGC........................................................................... 30 0 5 1.00 5 1 0 0 1 3 0 0 0 0 0
..................................................TTGTTGTTACTTAGCT..................................................................................... 16 0 5 1.00 5 0 4 1 0 0 0 0 0 0 0
...............................................TCCTTGTTGTTACTTAGCTGG................................................................................... 21 0 5 1.00 5 0 0 0 0 0 0 0 0 5 0
.............................................................................................................AGCGGCGACTCAGCCCCCGCGTC................... 23 0 4 1.00 4 0 4 0 0 0 0 0 0 0 0
.....................................................................................TGAGTCTTCGGCCAGT.................................................. 16 0 4 1.00 4 0 4 0 0 0 0 0 0 0 0
.................................................................TGGGCAGCGGCTCTGCTCACTGAGTCTT.......................................................... 28 0 5 1.00 5 1 1 1 1 1 0 0 0 0 0
...............................................TCCTTGTTGTTACTTAGCTGGGCAGC.............................................................................. 26 0 5 1.00 5 0 2 1 1 0 0 1 0 0 0
..............................................................................TGCTCACTGAGTCTTCGGCCAG................................................... 22 0 5 0.80 4 0 0 1 1 0 0 0 0 0 2
......................................................................................................................TCAGCCCCCGCGTCCCCCTCGCAGTA....... 26 0 5 0.80 4 1 0 2 0 0 0 1 0 0 0
.........................................................TACTTAGCTGGGCAGCGGCTCTGC...................................................................... 24 0 5 0.80 4 0 0 0 0 3 1 0 0 0 0
..............................................................................................................................CGCGTCCCCCTCGCAGTACGGTT.. 23 0 5 0.80 4 1 0 0 3 0 0 0 0 0 0
.................................................................TGGGCAGCGGCTCTGCTCACTGAGTC............................................................ 26 0 5 0.80 4 0 4 0 0 0 0 0 0 0 0
..........................................................ACTTAGCTGGGCAGCGGC........................................................................... 18 0 5 0.80 4 0 4 0 0 0 0 0 0 0 0
.........................................................TACTTAGCTGGGCAGCGGCTCTG....................................................................... 23 0 5 0.80 4 0 4 0 0 0 0 0 0 0 0
......................................................................................................................TCAGCCCCCGCGTCCCCCTCGCAGTACGGT... 30 0 5 0.80 4 0 0 0 3 1 0 0 0 0 0
.....................................................................................TGAGTCTTCGGCCAGTGCC............................................... 19 0 4 0.75 3 0 3 0 0 0 0 0 0 0 0
...............................................................................GCTCACTGAGTCTTCGGCCAGTGCC............................................... 25 0 4 0.75 3 0 3 0 0 0 0 0 0 0 0
..............................................................................TGCTCACTGAGTCTTCGGCCAGT.................................................. 23 0 4 0.75 3 0 0 2 1 0 0 0 0 0 0
..................................................................................................AGTGCCTTCGAAGAGTCGA.................................. 19 3 20 0.70 14 5 1 1 0 0 0 4 3 0 0
...........................................................................................TTCGGCCAGTGCCTTCAAAGCGGCG................................... 25 0 3 0.67 2 0 2 0 0 0 0 0 0 0 0
.........................................................TACTTAGCTGGGCAGCGGC........................................................................... 19 0 5 0.60 3 2 0 0 0 0 0 0 1 0 0
.................................................................TGGGCAGCGGCTCTGCTCACTGAGTCT........................................................... 27 0 5 0.60 3 0 2 1 0 0 0 0 0 0 0
......................................................TGTTACTTAGCTGGGCAGCGGCTCTGCT..................................................................... 28 0 5 0.60 3 0 2 0 0 1 0 0 0 0 0
...................................................TGTTGTTACTTAGCTGGGCAGC.............................................................................. 22 0 5 0.60 3 0 1 1 0 0 0 1 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGA.............................................................................. 23 1 5 0.60 3 2 0 0 0 1 0 0 0 0 0
...................................................TGTTGTTACTTAGCTGGGCAGCGG............................................................................ 24 0 5 0.60 3 0 2 0 0 1 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGGA........................................................................... 26 1 5 0.60 3 0 1 2 0 0 0 0 0 0 0
.................................................................TGGGCAGCGGCTCTGCT..................................................................... 17 0 5 0.60 3 0 3 0 0 0 0 0 0 0 0
..........................................................ACTTAGCTGGGCAGCGG............................................................................ 17 0 5 0.60 3 0 3 0 0 0 0 0 0 0 0
...............................................TCCTTGTTGTTACTTAGCTGGGCAGCGG............................................................................ 28 0 5 0.60 3 1 1 0 0 1 0 0 0 0 0
..............................................................................TGCTCACTGAGTCTTCGGCCA.................................................... 21 0 5 0.60 3 1 0 1 1 0 0 0 0 0 0
..............................................................................TGCTCACTGAGTCTTCGGCC..................................................... 20 0 5 0.60 3 0 0 0 0 0 3 0 0 0 0
.................................................CTTGTTGTTACTTAGCTGGGCAGCGGC........................................................................... 27 0 5 0.60 3 0 0 0 1 2 0 0 0 0 0
............................................................................TCTGTCCACTGAGTCTTCGGCCAGT.................................................. 25 2 4 0.50 2 0 0 0 0 2 0 0 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCCCGTGCC............................................... 28 1 4 0.50 2 0 0 0 0 0 2 0 0 0 0
....................TGGAAACCCGCCCCCCACAGGC............................................................................................................. 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................TTCAAAGCGGCGACTCAGCCCCCGCG..................... 26 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCCAGTGCCC.............................................. 29 1 4 0.50 2 0 0 0 0 0 2 0 0 0 0
.............................................................................CTGCTCACTGAGTCTTCGGCCAGTGC................................................ 26 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0
............................CGCCCCCCACAGGCCCTTCT....................................................................................................... 20 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0
.............................................................................CTGCTCACTGAGTCTTCGGCCAGTGCC............................................... 27 0 4 0.50 2 0 0 0 0 0 0 2 0 0 0
........................................................................................................TTCAAAGCGGCGACTCAGCCCCCGC...................... 25 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0
..............................................................................TGCTCACTGAGTCTTCGGCCAGTG................................................. 24 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0
.....................................................................................TGAGTCTTCGGCCAGTGCCTTCAAAGCA...................................... 28 1 4 0.50 2 0 2 0 0 0 0 0 0 0 0
......................................................................................GAGTCTTCGGCCAGTGCC............................................... 18 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0
.............................................................................................................AGCGGCGACTCAGCCCCCGCGTCC.................. 24 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0
.................................................................................TCACTGAGTCTTCGGCCAGT.................................................. 20 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCCGG................................................... 24 1 5 0.40 2 0 0 0 0 0 2 0 0 0 0
......................................................................................................................TCAGCCCCCGCGTCCCCCTCGCAGTACGG.... 29 0 5 0.40 2 0 0 0 0 2 0 0 0 0 0
..............................................CTCCTTGTTGTTACTTAGCTGGGCAGCGG............................................................................ 29 0 5 0.40 2 0 0 1 1 0 0 0 0 0 0
..............................................................................TGCTCACTGAGTCTTCGGC...................................................... 19 0 5 0.40 2 1 0 0 1 0 0 0 0 0 0
............................................TTCTCCTTGTTGTTACTTAGCTGGGC................................................................................. 26 0 5 0.40 2 1 0 1 0 0 0 0 0 0 0
............................................................TTAGCTGGGCAGCGGCTCTGCTCACT................................................................. 26 0 5 0.40 2 0 2 0 0 0 0 0 0 0 0
............................................................TTAGCTGGGCAGCGGCTCTGCTCAC.................................................................. 25 0 5 0.40 2 0 2 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGGT........................................................................... 26 1 5 0.40 2 0 2 0 0 0 0 0 0 0 0
.........................................................................GGCTCTGCTCACTGAGTCTTCGGC...................................................... 24 0 5 0.40 2 0 0 0 0 1 0 1 0 0 0
...............................................TCCTTGTTGTTACTTAGCTGGGCAG............................................................................... 25 0 5 0.40 2 1 0 1 0 0 0 0 0 0 0
.....................................................TTGTTACTTAGCTGGGCAGCGG............................................................................ 22 0 5 0.40 2 0 2 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGGCA.......................................................................... 27 1 5 0.40 2 0 1 0 0 0 0 1 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGTCAG................................................... 24 1 5 0.40 2 1 0 0 0 0 1 0 0 0 0
.............................................................TAGCTGGGCAGCGGCTCTGCT..................................................................... 21 0 5 0.40 2 0 2 0 0 0 0 0 0 0 0
..................................................TTTTTGTTACTTAGCTGGGCAGCGGC........................................................................... 26 1 5 0.40 2 0 0 0 2 0 0 0 0 0 0
............................................................................TCTGCTCACTGGGTCTTCGGCCAG................................................... 24 1 5 0.40 2 1 0 0 0 0 1 0 0 0 0
...........................................................................................TTCGGCCAGTGCCTTTAAAGCGGC.................................... 24 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................TTCGGCCAGTGCCTTCAAAGCGGCGAA................................. 27 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................TTCGGCCAGTGCCTTCAAAGCGGCCA.................................. 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................TTCGGCCAGTGCCTTCAAAGCGGCGAC................................. 27 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
....................................................................................................TGCCTTCAAAGCGGCGACTCAGCCCC......................... 26 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0
.................................................................................................CAGTGCCTTCAAAGCGGCG................................... 19 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................TGCCTTCAAAGCGGCGACTCAGC............................ 23 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0
.........................................................................................TCTTCGGCCGGTGCCTTCAAAGCGGC.................................... 26 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0
.....................................................................................TGAGTCTTCGGCCAGTGCCTTCAAAGCGGC.................................... 30 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................TGAGTCTTCGGCCAGTGCCTTCAAAGCGG..................................... 29 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................TCTTCATCCAGTGCCTTCAAAGCGG..................................... 25 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................GCTTCGGCCAGTGCCTTCAAAGCGGC.................................... 26 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0
............................................................................................TCGGCCAGTGCTTTCAAAGCGGCGAC................................. 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..................................................................................CACTGAGTCTTCGGCCAGTGCCTT............................................. 24 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0
...........................................................................................................AAAGCGGCGACTCAGCCCCCGCGTC................... 25 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................CTTCAAAGCGGCGACTCAGCCCC......................... 23 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................CTTCGGCCAGTGCCTTCAAAGC....................................... 22 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
........................................................................................GTCTTCGGCCAGTGCC............................................... 16 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................CTTCGGCCAGTGCCTTCAA.......................................... 19 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
...................................................................................ACTGAGTCTTCGGCCAGT.................................................. 18 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCCAGTGCCG.............................................. 29 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0
...................................................................................ACTGAGTCTTCGGCCAGTGCC............................................... 21 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................CGGCGACTCAGCCCCCGCGTCC.................. 22 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0
.........................................................................................................TCAAAGCGGCGACTCAGCCCC......................... 21 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................AGCGGCGACTCAGCCCCCGCGT.................... 22 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................TTCAAAGCGGCGACCCAGCCCCCGCG..................... 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0
...............................................................................GCTCACTGAGTCTTCGGCCAGT.................................................. 22 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCCAGTGCCTT............................................. 30 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................AGCGGCGACTCAGCCCCCGCGTCCC................. 25 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................TTCAAAGCGGCGACTCAGCCCC......................... 22 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCCAATCT................................................ 27 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................................TCAAAGCGGCGACTCAGCCCCCGCGTCC.................. 28 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................TGAGTCTTCGGCCAGTGCCTTC............................................ 22 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................................AAAGCGGCGACTCAGCCCCCGCGT.................... 24 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................TTCAAAGCGGCGACTCAGCC........................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................TTCAAAGCGGCGACTCAGCCCCCGCGT.................... 27 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................TTCAAAGCGGCGACTCAGCCCCCGCGTCA.................. 29 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................GCCTTCAAAGCGGCGA.................................. 16 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
............................................................................TCTGCTCACTGAGTTTTCGGCCAGT.................................................. 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................................................CTGCTCACTGAGTCTTCGGCCAGT.................................................. 24 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................TGAGTCTTCGGCCAGTGCCTTCAAA......................................... 25 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
............................................................................TCTGCTCACTGAGTCTCCGGCCAGTGCCTT............................................. 30 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................TTCAAAGCGGCGACTCAGC............................ 19 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCCAGTGCA............................................... 28 1 4 0.25 1 0 0 0 0 0 0 1 0 0 0
................................................................................................................GGCGACTCAGCCCCCGCGGCCCCCTC............. 26 1 4 0.25 1 0 0 0 0 0 0 1 0 0 0
.....................................................................................TGAGTCTTCGGCCAGTGCCTTCACAG........................................ 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................TTCAAAGCGGCGACTCAGCCCCCGCGTCC.................. 29 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0
............................................................................TCTGCTGACTGAGTCTTCGGCCAGT.................................................. 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
................................................................................CTCACTGAGTCTTCGGCCAGT.................................................. 21 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.........................................................................GCCTCTGCTCACTGAGTCTTCGGCCAGT.................................................. 28 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................TTCAAAGCGGCGACTCAGCCC.......................... 21 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................TGAGTCTTCGGCCAGTGCCTTCAA.......................................... 24 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAA............................................................................... 22 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..................................................TGGTTGTTACTTAGCTGGGCAG............................................................................... 22 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
.........................................................TACTTAGCTGGGCAGCGGCTCTGCTCA................................................................... 27 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCCGGGCAGCGGC........................................................................... 26 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
............................................................................TCTGCTCACTAAGTCTTCGGCCAG................................................... 24 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
..........................................................ACCTAGCTGGGCAGCGGCTCTGCTCAC.................................................................. 27 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.........................................................TACTTAGCTGGGCAGCGGCTCTGCTC.................................................................... 26 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
......................................................TGTTACTTAGCTGGGCAGCTGCTCTGCT..................................................................... 28 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
............................................................................TCTGCTCGCTGAGTCTTCGGCCAA................................................... 24 2 5 0.20 1 0 0 0 0 0 1 0 0 0 0
..................................................................................................................CGACTCAGCCCCCGCGTCCCCCTCGC........... 26 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.........................................................TAGTTAGGTGGGCAGCGGCTCTGCTCAC.................................................................. 28 2 5 0.20 1 0 1 0 0 0 0 0 0 0 0
...................................................TGTTGTTACTTAGCTGGCCAGCGGC........................................................................... 25 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................TCAGCCCCCGCGTCCCCCTCGCAGT........ 25 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.....................................................TTGTTGTTTAGCTGGGCAGCGGC........................................................................... 23 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................CGCGTCCCTCTCGCAGTACGGTT.. 23 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
.......................................................GTTACTTAGCTGGGCAGCGG............................................................................ 20 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
...................................................TGTTGTTACTTAGCTGGGCAGCGGCA.......................................................................... 26 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
......................................................TGTTACTTAGCTGGCCAGCGGCTCTAA...................................................................... 27 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0
...........................................................CTTAGCTGGGCAGCGGCTT......................................................................... 19 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..........................................................................GCTCTGCTCACTGAGTCT........................................................... 18 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.............................................................................CTGCTCACTGAGTCTTCGGCC..................................................... 21 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
.............................................TCTCCTTGTTGTTACTTAGCTGGGC................................................................................. 25 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
......................................................TGTTACTTAGCTGGGCAGCGGCTCCGC...................................................................... 27 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGGCTCTG....................................................................... 30 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGGCTC......................................................................... 28 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGA................................................................................. 20 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
............................................TTCTCCTTGTTGTTACTTAGCA..................................................................................... 22 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0
............................................................................TCTGTCCACTGAGTCTTCGGCCAG................................................... 24 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0
......................................................................AGCGGCTCTGCTCACTGAGTCTTCG........................................................ 25 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGTTGGGCAGC.............................................................................. 23 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
...................................................TATTGTTAGTTAGGTGGGCAGCGGC........................................................................... 25 3 5 0.20 1 0 0 0 1 0 0 0 0 0 0
......................................................TGTTACTTTGCTGGGCAGCGGCTCTG....................................................................... 26 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................CCCCTCGCAGTACGGT... 16 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................CGACTCAGCCCTCGCGTCCCCCTC............. 24 1 5 0.20 1 0 0 0 0 0 0 1 0 0 0
..................................................TTGTTGTTACTTAGCTGGGTAGCGGC........................................................................... 26 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
.....................................................TTGTTACTTAGCTGGGCAGCGGCT.......................................................................... 24 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
............................................................................TCTGCTCACTGAGGCTTCGGCCAG................................................... 24 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0
......................................................................AGCGGCTCTGCTCACTGAGTCTTCGGC...................................................... 27 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
...................................................TGTTGTTACTTAGCTGGGCAGCGGCTCT........................................................................ 28 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
.............................................................TAGCTGGGCAGCGGCTCTGC...................................................................... 20 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
............................................................TTAGCTGGGCAGCGGCTCTG....................................................................... 20 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................TTATTGTTACTTAGCTGGGCAG............................................................................... 22 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0
.......................................................GTTACTTAGCTGGGCAGC.............................................................................. 18 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.....................................................TTGTTACTTAGCTGGGCAGCGGCTC......................................................................... 25 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.................................................................................TCACTGAGTCTTCGGCCA.................................................... 18 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGTCC............................................................................ 25 3 5 0.20 1 0 0 1 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCCG............................................................................... 22 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0
......................................................TGTTACTTAGCTGGGCAGCGGCCTCG....................................................................... 26 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCATCGGC........................................................................... 26 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................................AGCCCCCGCGTCTCCCTCGCAGTACGGT... 28 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0
..........................................................ACTTAGCTGGGCAGCGGCTC......................................................................... 20 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.......................................................GTTACTTAGCTGGGCAGCGGCTCTG....................................................................... 25 0 5 0.20 1 0 0 0 0 0 0 1 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCTT.................................................... 23 2 5 0.20 1 0 0 0 1 0 0 0 0 0 0
............................................................................TCTGCTAACTGAGTCTTCGGCCAG................................................... 24 1 5 0.20 1 0 0 0 0 0 0 1 0 0 0
..................................................................................CACTGAGTCTTCGGCCAG................................................... 18 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGGCT.......................................................................... 27 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
.................................................................TGGGCAGCGGCTCTGC...................................................................... 16 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................TGAGTCTTCGGCCAG................................................... 15 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGA................................................................................... 18 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGCC........................................................................... 26 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
.............................................................TAGCTGGGCAGCGGCTC......................................................................... 17 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.......................................................GTTACTTAGCTGGGCAGCGGC........................................................................... 21 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..............................................CTCCTTGTTGTTACTTAGCTGGGCAGCG............................................................................. 28 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
....................................................GTTGTTACTTAGCTGGGCAGCGGCT.......................................................................... 25 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
...................................................CTTTGTTACTTAGCTGGGCAGCGG............................................................................ 24 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTTGGCAGCGG............................................................................ 25 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................TCCCCCTCGCAGTACGGT... 18 0 5 0.20 1 0 0 0 0 0 0 1 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGT............................................................................ 25 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGGCC.......................................................................... 27 1 5 0.20 1 0 0 0 0 0 0 1 0 0 0
...............................................TCCTTGTTGTTACTTAGCT..................................................................................... 19 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGAA........................................................................... 26 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...................................................TATTGTTACTTAGCTGGGCAGCGGC........................................................................... 25 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
......................................................TGTTACTTAGCTGGGCCGCGGCT.......................................................................... 23 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGTAGCG............................................................................. 24 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.................................................................TGGGCAGCGGCTCTGCTCA................................................................... 19 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGA............................................................................ 25 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
............................................................................TCTACTCACTGAGTCTTCGGCCAG................................................... 24 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0
......................................................TGTTACTTAGCTGGGCAG............................................................................... 18 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................CCCCGCGTCCCCCTCGCAGTACGGTT.. 26 0 5 0.20 1 0 0 0 0 0 0 1 0 0 0
..................................................TTGTTGTTACTTAGTTGGGCAGCGGC........................................................................... 26 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
............................................................TTAGCTGGGCAGCGG............................................................................ 15 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGC............................................................................ 25 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
............................................................................TCTGCTCACTGAGTC............................................................ 15 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..........................................................ACTTAGCTGGGCAGCGGCTCT........................................................................ 21 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTG.................................................................................... 17 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.....................................................TGTTTACTTAGCTGGGCAGCGGC........................................................................... 23 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGG.................................................................................. 19 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCCGCGGC........................................................................... 26 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0
...................................................TGTTGTTACTTAGCTGGGCAG............................................................................... 21 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
...............................................................................GCTCACTGAGTCTTCGGCCAG................................................... 21 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
...................................................TGTTGTTACTTAGCTGGGCAGCGAC........................................................................... 25 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTATCTGGGCAGC.............................................................................. 23 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................CCCCGCGTCCCCCTCGCAGTACGGT... 25 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
........................................................TTACTTAGCTGGGCAGCGGCTCTGCT..................................................................... 26 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
..................................................TTGTTGGTACTTAGCTGGGT................................................................................. 20 2 5 0.20 1 0 0 0 0 0 0 0 1 0 0
......................................................TGTTACTTAGCTGGGCA................................................................................ 17 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................CCCGCGTCCCCCTCGCAGTACGGT... 24 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
.................................................................TGAGCAGCGGCTCTGCTCACTGAGTCTT.......................................................... 28 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGTGCAGC.............................................................................. 23 1 5 0.20 1 0 0 0 0 0 0 0 1 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGGAA............................................................................ 25 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0
......................................AGGCCCTTCTCCTTGT................................................................................................. 16 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGGCTCTT....................................................................... 30 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
......................................................................................................................TCAGCCCCCGCGTCCCCCTCCCAGTAC...... 27 1 5 0.20 1 0 0 0 0 0 0 1 0 0 0
..................................................TTGTTGTTACTTAGCTGGT.................................................................................. 19 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................CTTCGGCCAGTGCCT.............................................. 15 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................CCCCCGCGTCCCCCTCGCAGTACGGTT.. 27 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.........................................................TACTTAGCTGGGCAGCGGCTCTGCC..................................................................... 25 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................CGCGTCCCCCTCGCAGTACGGT... 22 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
......................................................TGTTACTTAGCTGGGCAGCG............................................................................. 20 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..........................................................ACTTAGCTGGGCAGC.............................................................................. 15 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................TGAGTCTTCGGCCAGC.................................................. 16 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
..................................................................................CACTGAGTCTTCGGCAA.................................................... 17 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
................................................................CTGGACAGCGGCTCTG....................................................................... 16 1 7 0.14 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................GACTCAGCCCCCGCGTC................... 17 0 7 0.14 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................CGACTCAGCCCCCGCGT.................... 17 0 7 0.14 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................GCCCTCGCGTCCCCC............... 15 1 7 0.14 1 0 1 0 0 0 0 0 0 0 0
.............................................................TAGCTGGGCAGCGCC........................................................................... 15 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0
...............CTTAACGGAAAGCCGC........................................................................................................................ 16 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

CAAACCGTACTGCGAGGGGGACGCGGGGGCTGAGTCGCCGCTTTGAAGGCACTGGCCGAAGACTCAGTGAGCAGAGCCGCTGCCCAGCTAAGTAACAACAAGGAGAAGGGCCTGTGGGGGGCGGGTTTCCATTAAGAGAAACAAATATACA
************************************.(((((.......((((((((...))).))))))))))((((.((.(((.((((.....)))).)))...))))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
Ovary		 SRR553485
Ovary		 SRR553486
Ovary		 SRR553487
Ovary		 M053
Female-body		 M025
embryo
 SRR553488
Ovary		 O001
Testis
 GSM343915
embryo
 M024
male body
................................................................................TGCCCAGCTAAGTAACAACAAGGAGA............................................. 26 0 5 11.60 58 0 31 20 4 1 0 2 0 0 0
..............................TGAGTCGCCGCTTTGAAGGCACTGGC............................................................................................... 26 0 3 11.33 34 24 2 2 1 4 0 1 0 0 0
...................................CGCCGCTTTGAAGGCACTGGCCGAA........................................................................................... 25 0 3 10.67 32 5 15 5 5 0 0 2 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGAGC.......................................................................... 25 0 5 10.40 52 36 4 3 1 1 4 1 0 2 0
...................................CGCCGCTTTGAAGGCACTGGCCGAAGA......................................................................................... 27 0 3 7.33 22 4 9 6 2 0 0 1 0 0 0
.......................................................................................CTAAGTAACAACAAGGAGAAGGGC........................................ 24 0 5 4.40 22 22 0 0 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTG..................................... 23 0 5 3.80 19 14 1 2 0 1 0 1 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTGT.................................... 24 0 5 3.60 18 2 0 0 0 5 10 0 0 1 0
...........................................................................................GTAACAACAAGGAGAAGGGCCT...................................... 22 0 5 3.60 18 10 1 1 1 0 3 2 0 0 0
.............................................................................CGCTGCCCAGCTAAGTAACAACAAGGAGA............................................. 29 0 5 3.20 16 0 6 8 2 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGC........................................ 20 0 5 2.60 13 10 1 0 0 0 1 0 0 1 0
..........................................TTGAAGGCACTGGCCGAAGACTCAGTG.................................................................................. 27 0 4 2.25 9 1 5 3 0 0 0 0 0 0 0
...........................................TGAAGGCACTGGCCGAAGACTCAGTG.................................................................................. 26 0 4 2.25 9 6 1 1 1 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCC....................................... 21 0 5 2.00 10 4 1 1 0 2 2 0 0 0 0
...........................................TGAAGGCACTGGCCGAAGACTCAGTGA................................................................................. 27 0 4 1.75 7 4 2 0 1 0 0 0 0 0 0
...........................................TGAAGGCACTGGCCGAAGACTCAGT................................................................................... 25 0 4 1.75 7 4 0 1 1 1 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGAGCCGC....................................................................... 28 0 5 1.60 8 8 0 0 0 0 0 0 0 0 0
..................................................ACTGGCCGAAGACTCAGTGAGCAGAGC.......................................................................... 27 0 4 1.50 6 3 0 1 0 1 1 0 0 0 0
............................................GAAGGCACTGGCCGAAGACTCAGTGAGC............................................................................... 28 0 4 1.50 6 1 2 3 0 0 0 0 0 0 0
.......................................................................................CTAAGTAACAACAAGGAGAAGGG......................................... 23 0 5 1.40 7 7 0 0 0 0 0 0 0 0 0
...................................................CTGGCCGAAGACTCAGTGAGCAGAGC.......................................................................... 26 0 5 1.40 7 3 1 0 1 0 1 0 0 0 1
.................................GTCGCCGCTTTGAAGGCACTGGCCGAA........................................................................................... 27 0 3 1.33 4 0 2 1 0 0 0 1 0 0 0
........................GGGGGCTGAGTCGCCGCTTTGAAGGCAC................................................................................................... 28 0 3 1.33 4 2 1 1 0 0 0 0 0 0 0
.......................CGGGGGCTGAGTCGCCGCTTTGAAGGCAC................................................................................................... 29 0 3 1.33 4 1 1 2 0 0 0 0 0 0 0
..........................................TTGAAGGCACTGGCCGAAGACTCAGTGA................................................................................. 28 0 4 1.25 5 1 3 1 0 0 0 0 0 0 0
.............................................AAGGCACTGGCCGAAGACTCAGTGAGC............................................................................... 27 0 4 1.25 5 0 1 2 1 0 0 1 0 0 0
..........................................TTGAAGGCACTGGCCGAAGACTCAG.................................................................................... 25 0 4 1.25 5 2 3 0 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGA............................................................................ 23 0 5 1.20 6 3 1 0 0 0 2 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGAG........................................................................... 24 0 5 1.00 5 3 1 1 0 0 0 0 0 0 0
.......................................................................................CTAAGTAACAACAAGGAGAAGGGCC....................................... 25 0 5 1.00 5 4 0 0 0 1 0 0 0 0 0
........................................................................................TAAGTAACAACAAGGAGAAGGGCC....................................... 24 0 5 1.00 5 0 0 0 0 0 0 0 5 0 0
..................................TCGCCGCTTTGAAGGCACTGGCCGAAGA......................................................................................... 28 0 3 1.00 3 0 2 0 0 0 0 1 0 0 0
.........................................TTTGAAGGCACTGGCCGAAGACTCAG.................................................................................... 26 0 4 1.00 4 2 1 0 0 1 0 0 0 0 0
...............................................................TCAGTGAGCAGAGCCGCTGCCCAGC............................................................... 25 0 5 1.00 5 2 0 0 0 3 0 0 0 0 0
...................................................................................................AAGGAGAAGGGCCTGTGGGGGGCGGGT......................... 27 0 2 1.00 2 0 0 2 0 0 0 0 0 0 0
.................................GTCGCCGCTTTGAAGGCACTGGCCGAAGA......................................................................................... 29 0 3 1.00 3 0 2 1 0 0 0 0 0 0 0
........................................................................................TAAGTAACAACAAGGAGAAGGGCCTGT.................................... 27 0 5 0.80 4 0 0 0 0 1 3 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGG.......................................... 18 0 5 0.80 4 1 1 1 1 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTA..................................... 23 1 5 0.80 4 1 1 0 2 0 0 0 0 0 0
......................................................GCCGAAGACTCAGTGAGCAGAGCCGC....................................................................... 26 0 5 0.80 4 1 1 0 0 2 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGAGCC......................................................................... 26 0 5 0.80 4 4 0 0 0 0 0 0 0 0 0
..........................................TTGAAGGCACTGGCCGAAGACTCAGT................................................................................... 26 0 4 0.75 3 1 1 0 1 0 0 0 0 0 0
......................................CGCTTTGAAGGCACTGGCCGAAGAC........................................................................................ 25 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0
.........................................TTTGAAGGCACTGGCCGAAGACTCAGT................................................................................... 27 0 4 0.75 3 2 0 0 1 0 0 0 0 0 0
......................................CGCTTTGAAGGCACTGGCCGAAGA......................................................................................... 24 0 4 0.75 3 0 1 1 1 0 0 0 0 0 0
..................................................ACTGGCCGAAGACTCAGTGAGCAGA............................................................................ 25 0 4 0.75 3 1 1 1 0 0 0 0 0 0 0
.....................................CCGCTTTGAAGGCACTGGCCGAAGA......................................................................................... 25 0 3 0.67 2 0 0 0 1 1 0 0 0 0 0
...................................CGCCGCTTTGAAGGCACTGGCCGAAGAC........................................................................................ 28 0 3 0.67 2 0 0 1 1 0 0 0 0 0 0
............................GCTGAGTCGCCGCTTTGAAGGCAC................................................................................................... 24 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCT....................................... 21 1 5 0.60 3 0 1 0 0 0 0 2 0 0 0
....................................................TGGATGAAGACTCGGTGAGCAGAGC.......................................................................... 25 3 5 0.60 3 0 1 2 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAG............................................................................. 22 0 5 0.60 3 1 1 0 0 1 0 0 0 0 0
.......TACTGCGAGGGGGACGCGGGGGC......................................................................................................................... 23 0 5 0.60 3 2 0 0 0 1 0 0 0 0 0
....................................................................................CAGCTAAGTAACAACAAGGAGA............................................. 22 0 5 0.60 3 0 1 2 0 0 0 0 0 0 0
.....................................................GGCCGAAGACTCAGTGAGCAGAGCCGC....................................................................... 27 0 5 0.60 3 3 0 0 0 0 0 0 0 0 0
............................................................................................TAACAACAAGGAGAAGGGCCTGTG................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................GGGCCTGTGGGGGGCGGG.......................... 18 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0
................................................................................................................TGTGGGGGGCGGGTTTCCATTAAG............... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
..............................................AGGCACTGGCCGAAGACTCAGTGA................................................................................. 24 0 4 0.50 2 0 0 2 0 0 0 0 0 0 0
.................................................................................................ACAAGGAGAAGGGCCTGTGGGGGGC............................. 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................AAGGAGAAGGGCCTGTGGGGGG.............................. 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
............................................................................................TAACAACAAGGAGAAGGGCCTGTGGGGG............................... 28 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0
...........................................TGAAGGCACTGGCCGAAGACTCAG.................................................................................... 24 0 4 0.50 2 0 1 0 1 0 0 0 0 0 0
..........................................TTGAAGGCACTGGATGAAGACTCGGTG.................................................................................. 27 3 4 0.50 2 0 2 0 0 0 0 0 0 0 0
........................GGGGGCTGAGTCGCCGCTTTGAAGG...................................................................................................... 25 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.................................................................................................ACAAGGAGAAGGGCCTGTGGGGGG.............................. 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
............................................................................................TAACAACAAGGAGAAGGGCCTGTGGGGT............................... 28 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0
...................GACGCGGGGGCTGAGTCGCCGCTT............................................................................................................ 24 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................CAACAAGGAGAAGGGCCTGTGTGGGGC............................. 27 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0
.......................................GCTTTGGAGGGACTGGC............................................................................................... 17 2 20 0.45 9 0 0 9 0 0 0 0 0 0 0
.......................................................................................CTAAGTAACAACAAGGAGAAGGGT........................................ 24 1 5 0.40 2 2 0 0 0 0 0 0 0 0 0
........................................................CGAAGACTCAGTGAGCAGAGCCGCTGC.................................................................... 27 0 5 0.40 2 0 1 0 0 1 0 0 0 0 0
......................................................................................GCTAAGTAACAACAAGGAGA............................................. 20 0 5 0.40 2 1 0 1 0 0 0 0 0 0 0
.....................................................................AGCAGAGCCGCTGCCCAGC............................................................... 19 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0
.....................................................................AGCAGAGCCGCTGCCCA................................................................. 17 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0
......................................................GCCGAAGACTCAGTGAGCAGAGC.......................................................................... 23 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0
.......TACTGCGAGGGGGACGCGGGG........................................................................................................................... 21 0 5 0.40 2 1 0 1 0 0 0 0 0 0 0
............................................................................................TAACAACAAGGAGAAGGGCCTG..................................... 22 0 5 0.40 2 1 0 0 0 1 0 0 0 0 0
........................................................CGAAGACTCAGTGAGCAGAGCCGC....................................................................... 24 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0
..AACCGTACTGCGAGGGGG................................................................................................................................... 18 0 5 0.40 2 1 0 0 1 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGC............................................................................... 20 0 5 0.40 2 1 0 0 0 0 1 0 0 0 0
.......................................................................................CGAAGTAACAACAAGGAGAAGGGCC....................................... 25 1 5 0.40 2 2 0 0 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCA.............................................................................. 21 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0
...........................................................................................CTAACAACAAGGAGAAGGGCC....................................... 21 1 5 0.40 2 0 0 0 0 0 2 0 0 0 0
......GTACTGCGAGGGGGA.................................................................................................................................. 15 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0
...............................................................TCAGTGAGCAGAGCCGCTGCCCAGCTA............................................................. 27 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0
........................................................CGAAGACTCAGTGAGCAGAGCCGCTGCC................................................................... 28 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGAA........................................................................... 24 1 5 0.40 2 1 1 0 0 0 0 0 0 0 0
.....CGTACTGCGAGGGGGA.................................................................................................................................. 16 0 5 0.40 2 1 0 0 0 0 0 1 0 0 0
.......TACTGCGAGGGGGAC................................................................................................................................. 15 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0
...............................................................TCAGTGAGCAGAGCCGCTGCCCAGCT.............................................................. 26 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0
...............................GAATAGCCGCTTTGAAGGGACTGG................................................................................................ 24 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0
.............................CTGAGTCGCCGCTTTGAAGGCACTGGC............................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...................................CGCCGCTTTGAAGGCACTGGCCGAAG.......................................................................................... 26 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
..................................TCGCCGCTTTGAATGCACTGGCCGA............................................................................................ 25 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.................................GTCGCCGCTTTGAAGGCAC................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.....................................CCGCTTTGAAGGCACTGGCCGAAGAC........................................................................................ 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
....................................GCCGCTTTGAAGGCACTGGCCGAAGA......................................................................................... 26 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
..............................TGAGTCGCCGCTTTGAAGGCA.................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..............................TGAGTCGCCGCTTTGAAGGCACT.................................................................................................. 23 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...................................CGCCGCTTTGAAGGCACTGGCCGA............................................................................................ 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...................................CGCCGCTTTGAAGGCACTGGCCGAAGAA........................................................................................ 28 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.........................GGGGCTGAGTCGCCGCTTTGAAGGCACT.................................................................................................. 28 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
..............................TGAGTCGCCGCTTTGAAGGCACTGGCCGA............................................................................................ 29 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
...........................GGCTGAGTAGCCGCTTTGAAGGCAC................................................................................................... 25 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0
........................GGGGGCTGAGTCGCCGCTTTGAAGGCACT.................................................................................................. 29 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
..................................TCGCCGCTTTAAAGGCACTGGCCGAA........................................................................................... 26 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0
...................................CGCCGCTTTGAAGGCACA.................................................................................................. 18 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..............................TGAGTCGCCGCTTTGAAAGCACT.................................................................................................. 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
......................CAGGGGGCTGAGTCGCCGCTTTGAAGGCAC................................................................................................... 30 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..............................TGAGTCGCCGCTTTGAAGGTACTGGC............................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.........................GGGGCTGAGTCGCCGCTTTGAAGGCAC................................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..................................TCGCCGCTTTGAAGGCACTGGCCGAA........................................................................................... 26 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
........................GGGGGCTGAGTCGCCGCT............................................................................................................. 18 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..........................................TTGAAGGCACTGGCCGAAGA......................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
...................GACGCGGGGGCTGAGTCGCCGCTTT........................................................................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
......................................CGCTTTGAAGGCACTGGATGAAGAC........................................................................................ 25 2 4 0.25 1 0 0 0 0 0 0 1 0 0 0
..............................TGAGTCGCCGCTTTGAAGG...................................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
...........................................TGAAGGCACTGGCCGAAGACTCAGC................................................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
...................GACGCGGGGGCTGAGTCGCCGC.............................................................................................................. 22 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.............................................AAGGCACTGGATGAAGACTCGGTGAGC............................................................................... 27 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0
............................................GAAGGCACTGGCCGAAGACTCAGTGA................................................................................. 26 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
......................GCGGGGGCTGAGCCGCCGC.............................................................................................................. 19 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..............................TGAGTCGCCGCTTTGAA........................................................................................................ 17 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
............................................GAAGGCACTGGATGAAGACTCGGTG.................................................................................. 25 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.........................................TTTGAAGGCACTGGCCGAAGACTCAGTGA................................................................................. 29 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0
......................................CGCTTTGAAGGGACTGGATGAAGAC........................................................................................ 25 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0
........................GGGGGCTGAGTCGCCGCTTTGAAGGC..................................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..................................................ACTGGATGAAGACTCGGTGAGCAG............................................................................. 24 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.............................................AAGGCACTGGCCGAAGACTCAGTGAG................................................................................ 26 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
............................GCTGAGTCGCCGCTTT........................................................................................................... 16 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
............................................GAAGGCACTGGCCGAAGACTCAGTG.................................................................................. 25 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0
..................................................ACTGGATGAAGACTCGGTGAGCAGAGC.......................................................................... 27 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0
...................GACGCGGGGGCTGAGTCGCCGCT............................................................................................................. 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.................................................CACTGGCCGAAGACACAG.................................................................................... 18 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
...............................................GGCACTGGCCGAAGACTCAGT................................................................................... 21 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.....................CGCGGGGGCTGAGTCGCCGCTTT........................................................................................................... 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
......................................CGCTTTGAAGGCACTGGCCGAAG.......................................................................................... 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.........................................TTTGAAGGCACTGGATGAAGACTCGG.................................................................................... 26 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0
..................................................ACTGGCCGAAGACTCAGTGAGCAGAG........................................................................... 26 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTG.................................................................................. 17 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................ACAAGGAGAAGGGCCTGT.................................... 18 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.........CTGCGAGGGGGACGCGGG............................................................................................................................ 18 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................CTAAGTAACAACAAGGAGAAG........................................... 21 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
................................................................................TGCCCAGCTAAGTAACAACAAGAAGA............................................. 26 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0
........................................................................................TAAGTAACAACAAGGAGAAGGGCATGT.................................... 27 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0
......................................................GCCGAAGACTCAGTGAGCAGAGCCGCTGC.................................................................... 29 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
........................................................TGAAGACTCGGTGAGCAGAGCCGC....................................................................... 24 2 5 0.20 1 0 0 0 0 0 0 1 0 0 0
.......................................................................................CTAAGTAACAACAAGGAGAAGGGCT....................................... 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
........................................................CGAAGACTCAGTGAGCAGAGC.......................................................................... 21 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTGTT................................... 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
CAAACCGTACTGCGAGGGGGACGCGGGG........................................................................................................................... 28 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
.......TACTGCGAGGGGGACGCGG............................................................................................................................. 19 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..............................................................CTCAGTGAGCAGAGCCGCTGCCCAGC............................................................... 26 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.................................................................AGTGAGCAGAGCCGCTGCCCAGCTAA............................................................ 26 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
........................................................CGAAGACTCAGTGAGCAGAGCCGCTG..................................................................... 26 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGA................................................................................. 18 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
......................................................................................GCTAAGTAACAACAAGGAGAAGGGC........................................ 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.....................................................GGCCGAAGACTCAGTGAGC............................................................................... 19 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGAGCCG........................................................................ 27 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGA............................................. 15 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
........................................................CGAAGACTCAGTGAGCAGAGCCGCT...................................................................... 25 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
...................................................................................CCAGCTAAGTAACAACAAGGA............................................... 21 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
................................................................................................AACAAGGAGAAGGGCCTG..................................... 18 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..........TGCGAGGGGGACGCGGGGGCTGAGT.................................................................................................................... 25 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
....................................................TGGATGAAGACTCGGTGAGCAGAGCCGC....................................................................... 28 3 5 0.20 1 0 0 1 0 0 0 0 0 0 0
............................................................GACTCAGTGAGCAGAGCCGCTG..................................................................... 22 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
CAAACCGTACTGCGAGGGGGACGCGG............................................................................................................................. 26 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................AGTAACAACAAGGAGAAGGGC........................................ 21 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
....................................................................................CAGCTAAGTAACAACAAGGAGAAGGG......................................... 26 0 5 0.20 1 0 0 0 0 0 0 1 0 0 0
...................................................................TGAGCAGAGCCGCTGCCCAGCTAAGT.......................................................... 26 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................GCAACAACAAGGAGAAGGGCC....................................... 21 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...................................................................................CCAGCTAAGTAACAACAAGGAGAAGGG......................................... 27 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
.........................................................GAAGACTCAGTGAGCAGAGCCGCTG..................................................................... 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
........................................................CGAAGACTCAGTGAGCAGAGCCGCTGCCC.................................................................. 29 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
....................................................TCGCCGAAGACTCAGTGAGCAGAG........................................................................... 24 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGAGCA......................................................................... 26 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.......TACTGCGAGGGGGACGCGGT............................................................................................................................ 20 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................ACAAGGAGAAGGGCCTC..................................... 17 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGG......................................... 19 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGAGT.......................................................................... 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.......................................................CCGAAGACTCAGTGAGC............................................................................... 17 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
......................................................................................GCTAAGTAACAACAAGGA............................................... 18 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
...ACCGTACTGCGAGGGG.................................................................................................................................... 16 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
........................................................................................TAAGTAACAACAAGG................................................ 15 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.......TACTGCGAGGGGGACG................................................................................................................................ 16 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.AAACCGTACTGCGAGGGGGACGCG.............................................................................................................................. 24 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..............................................................ATCAGTGAGCAGAGCCGCTGCCCAGC............................................................... 26 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
.....................................................................................AGCTAAGTAACAACAAGGAGAAGGGCC....................................... 27 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTGC.................................... 24 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGAGCCGCT...................................................................... 29 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
CAAACCGTACTGCGAGGGGGACGCG.............................................................................................................................. 25 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGA........................................ 20 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
....................................................TGGCCGATGACTCAGGGAGCAGAGG.......................................................................... 25 3 5 0.20 1 0 0 0 0 0 0 0 0 1 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTGG.................................... 24 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0
....................................................TGGCCGAAGACTCAGT................................................................................... 16 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................CTAAGTAACAACAAGG................................................ 16 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..........TGCGAGGGGGACGCGGGGGCTGAG..................................................................................................................... 24 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
.....................................................................AGCAGAGCCGCTGCCCAGCTAA............................................................ 22 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTGA.................................... 24 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGA.......................................... 18 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCTC...................................... 22 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0
............................................................................................TAACAACAAGGAGAAGGGC........................................ 19 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
................................................................................TGCCCAGCTAAGTAACAACA................................................... 20 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.......TACTGCGAGGGGGACGCGGGGGCTG....................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.......TACTGCGAGGGGGACGCGGGAAA......................................................................................................................... 23 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................GGAACAACAAGGAGAAGGGCC....................................... 21 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0
..........................................................AAGACTCAGTGAGCAGAGCC......................................................................... 20 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGAGA.......................................................................... 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................CTAAGTAACAACAAGGAGAAGGGAAA...................................... 26 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...................................................................TGAGCAGAGCCGCTGCCCAGCTAAG........................................................... 25 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..............................................................CTCAGTGAGCAGAGCCGCTGCCCAG................................................................ 25 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
.....................................................GGCCGAAGACTCAGTGAGCAGAGC.......................................................................... 24 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTTC.................................... 24 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGAGG.......................................................................... 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..........TGCGAGGGGGACGCGG............................................................................................................................. 16 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
....................................................TGGCCGAAAACTCAGTGAG................................................................................ 19 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
....................................................................................CCGCTAAGTAACAACAAGGAGAA............................................ 23 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
........................................................................................TAAGTAACAACAAGGAGAAGGGCCTG..................................... 26 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
TAAACCGTACTGCGAGGGGGACGCGG............................................................................................................................. 26 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGT........................................ 20 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................CTAAGTAACAACAAGGAGAAGGGCCT...................................... 26 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...........................................................AGACTCAGTGAGCAGAGCCGCTGC.................................................................... 24 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...........................................................AGACTCAGTGAGCAGAGCCGCTG..................................................................... 23 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..AACCGTACTGCGAGGGGGACACGGG............................................................................................................................ 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
....................................................TGGCCAAAGACTCAGTGAGCA.............................................................................. 21 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
......................................................................................GCTAAGTAACAACAAGGAGAAGGGCC....................................... 26 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................CTAAGTAACAACAAGGAGAAGGT......................................... 23 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.............................................................................CGCTGCCCAGCTAAGTAACAACAAGGA............................................... 27 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.........................................................GAAGACTCGGTGAGCAGATCCGCTG..................................................................... 25 2 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..................................................................................CCCAGCTAAGTAACAACAAGGAGAAGG.......................................... 27 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
..................................................................GTGAGCAGAGCCGCTGCC................................................................... 18 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
........................GAGGGCTGAGTAGCTGCTTTGA......................................................................................................... 22 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................AAGGAGAAGGGCCTGT.................................... 16 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...............................................................TCAGTGAGCAGAGCCGCT...................................................................... 18 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................CAAAGTAACAACAAGGAGAAGGGC........................................ 24 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...............................................................TCAGTGAGCAGAGCCGCTGCCCAG................................................................ 24 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...........................................................AGACTCAGTGAGCAGAGCCGC....................................................................... 21 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.....CGTACTGCGAGGGGG................................................................................................................................... 15 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
............................................................GACTCAGTGAGCCGAGTC......................................................................... 18 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
............................................................................................CAACAACAAGGAGAAGGGC........................................ 19 1 6 0.17 1 0 0 0 0 1 0 0 0 0 0
..................................................................................................CAAGGAGAAGGGCCTG..................................... 16 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................AAGGGCGTGTGGGGG............................... 15 1 19 0.16 3 0 0 0 0 0 0 3 0 0 0
..................GGACGCGGGGGCTGAGTC................................................................................................................... 18 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0
..........TGCGAGGGGGACGCGGAA........................................................................................................................... 18 2 7 0.14 1 0 0 1 0 0 0 0 0 0 0
..............AGGAGGACGCGGGGG.......................................................................................................................... 15 1 16 0.13 2 0 0 2 0 0 0 0 0 0 0
....................................GCCGCTTTAAAGACACTG................................................................................................. 18 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0
..............................................................CTCAGTAAGCAGTGTCGCT...................................................................... 19 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................AAGGGCTTGTGGGGG............................... 15 1 13 0.08 1 0 0 0 0 0 0 1 0 0 0
...............................................................................................CAACAAGGAGAAAGGC........................................ 16 1 14 0.07 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................GTTTCCATTAAGAGT............ 15 1 15 0.07 1 1 0 0 0 0 0 0 0 0 0
..............AGGAGGACGCGGGGGTT........................................................................................................................ 17 2 19 0.05 1 0 0 1 0 0 0 0 0 0 0
....................TCGCGAGGGCTGAGTAGC................................................................................................................. 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 chrU_M_3373:12403-12553 + dsi_46 TGTATATTTGTTTCTCTT-AATGGAAACCCGCCCCCCACAGGC-CCTTCTCCTTGTT-----GTTACTTAGCTGGGCAGCGGCTCTGCT---CACTGAGTCTTCGGCCAGTGCCTTCAAAGCGGCGACTCAGCCCCCGCGTCCCCCTCGCAGTACGGTTTG
droSec2 scaffold_2056:1326-1475 + TA--TATTTGTTTGCCTT-AGTGGAAACCCGCTCCCCGCAGGC-CCTTCGCCTTATT-----GTTACTTAGCTGGGCAGCGGCTCTGCT---CACCGAGTCTTCATCCAGTGCCTTCAAAGCGGCTATTCAGCCCCCGCGACCCCCTCGCCGTACTGTTTG
dm3 chr2L:3252410-3252560 + TGTATATTTGTTTGCCTT-ATTGGAGACCCGCTCCCCGCAGGC-CCTTCACCTTATC-----GTTACTTAGCTGGACAGTGGCTCTGCT---CGTTGAGTCTTCGTCCAATGCCTTCAAAGCGGCGACTCAGCCCCCGCGACCCCCTTGCCGTACTGTTTG
droEre2 scaffold_4929:22034562-22034712 + TGTATATTTGTTTGCCTT-ATTGGAGACCCGCTCCCCGCAGGC-CCTTCACCTTATC-----GTTACTTAGCTAGGCAGTGGCTCTGCT---CATTGAGTCTTCGTCCAATGCCTTCAAAGCGGCGACTCAGCCCCCGCGACCCCCTTGCCGTACTGTTTG
droYak3 v2_chrUn_960:34940-35090 + TGTATATTTGTTTGCCTT-ATTGGAGACCCGCTCCCCGCAGGC-CCTTCACCTTATC-----GTTACTTAGCTAGGCAGTGGCTCTGCT---CGTTGAGTCTTCGTCCAATGCCTTCAAAGCGGCGACTCAGCCCCCGCGACCCCCTTGCCGTACTGTTTG
droEug1 scf7180000405779:9462-9608 - TATATTTTTTTTTGCCAT-AGCGGAGACCCGGTCCCCGCGACCCCCTTCCCCTAGTC-----ATTGCTTGGCAAGGCAACAGCTCAGTTTTTCAACGAGCTCTCGTCCATTGTTATC-AAGCGGCAACTCAGCCCCCGCGGCTCCCTCGCCATA-------
droBia1 scf7180000301234:8654-8797 + T------TGGTTTGCCAT-AGCGGAGGCTCGTTACCCACCCAC-CCCTCACCTTGTC-----ACTGCCTGGCAAGGCAACGACTCAGGT---TGAACAGCC-CCATCCATCGTGGTCAAAGCGGCGACTCAGCCCCCGCGTCCCCCTTGACAAGCCAGCTG
droEle1 scf7180000489754:805-924 + C-----TTTGTTTATCGT-AGCAGAGGCTTGGTCCCCAC---------------------------------AAGGCGGCAGCTCAGTT---CGACGAGCTCACTTACATCGTTGCTAAGGCGGCGGCTCCGTCCCCGCATACCCCTTGCCATGCCAACTG
droRho1 scf7180000773245:4153-4304 - TATATTTTTGTTTGCCAT-AGCGGAGACCCGGTCCCCGCGATCCCCTTCCCCTTGTTAAGCAATTGCTTGACAAGGCAAAAGCTCAGTTTTTCAACGAGCTTTCGTCCATCGTT-ACGAAGCGGCATATCAGCCCCCGCGTCCCCCTCGCCATA-------
droKik1 scf7180000299456:186-331 + TATATATTGGTTCGCCAT-AGCGGAGACCCGGTCCCCGCGATCCCCTTTCCCTTGTC-----ATTGCTTGGCAAGGCAACAGCTCAGTTTT-TAACTAGCTCTCGTCCATCGTTGCC-AAGCGGCAACTCAGCCCCCGCGGCCCCCTCGCCATA-------
droAna3 scaffold_13086:2089-2238 + CATTTCTTTGTTTCTCAT-AGCGGAGGCTCTGTCCCCGCATAC-CCTTGACCTTGTC-----GCTGCTTGGCAGGGCACCGGCTCGATT---TGACGAGCTCATTTA-CTTGTCGCTAGAGCGGCGGCTCCGACCCCGCACACCCCTTGCCATGCCAACTG
droBip1 scf7180000392035:3080-3228 + TTTTTCTTTGTTTATAATAAGCGGAGGCTCAGTCCCCGCACAC-CCCTCACCTTGTC-----TTTACTTGGCAAGGCAACAGCGCAGTT---TAACGAGCTCGCACACTTA---ATTGAAGCGGCGGCTCAGCCCCCGCGACCCCCCCACAAGCCCAACTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
TGTATATTTGTTTCTCTT-AATGGAAACCCGCCCCCCACAGGC-CCTTCTCCTTGTT-----GTTACTTAGCTGGGCAGCGGCTCTGCT---CACTGAGTCTTCGGCCAGTGCCTTCAAAGCGGCGACTCAGCCCCCGCGTCCCCCTCGCAGTACGGTTTGSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
...................................................................................TCTGCT---CACTGAGTCTTCGGCCAG...................................................24571.60358100103005653493498
....................................................TTGTT-----GTTACTTAGCTGGGCAGCGGC..............................................................................26565.40327300000127887706017
....................................................TTGTT-----GTTACTTAGCTGGGCAG..................................................................................22542.402120000000302993600
...................................................................................TCTGCT---CACTGAGTCTTCGGCCA....................................................23520.401020000000262123266
....................................................TTGTT-----GTTACTTAGCTGGGCAGC.................................................................................23518.60930000003101733219
...................................................................................TCTGCT---CACTGAGTCTTCGGCCAGT..................................................25416.7567000100114923613
....................................................TTGTT-----GTTACTTAGCTGGGCAGCGG...............................................................................25512.006020000043851820
...................................................................................TCTGCT---CACTGAGTCTTCGGCCAGTGCC...............................................28411.00440007005329711
....................................................TTGTT-----GTTACTTAGCTGGGCA...................................................................................2158.40420000000972042
.....................................................TGTT-----GTTACTTAGCTGGGCAGCGGC..............................................................................2556.6033000000059559
.................................................TCCTTGTT-----GTTACTTAGCTGGGCAGCGGC..............................................................................2956.203100000012107110
...................................................................................................TCTTCGGCCAGTGCCTTCAAAGCGGC....................................2635.67170000000106100
....................................................TTGTT-----GTTACTTAGCTGGGC....................................................................................2055.0025200100089122
........................................................T-----GTTACTTAGCTGGGCAGCGGCTCTG..........................................................................2654.80241001001211413
...................................................................................TCTGCT---CACTGAGTCTTCGGCCAGTGC................................................2744.0016000000110572
.....................................................................................................TTCGGCCAGTGCCTTCAAAGCGGCGA..................................2633.6711000000000533
..................................................................................................................TTCAAAGCGGCGACTCAGCCCCCGCGTC...................2843.5014000000500018
....................................................TTGTT-----GTTACTTAGCTGGGCAGCG................................................................................2453.0015000000400335
.....................................................................................................TTCGGCCAGTGCCTTCAAAGCGGC....................................2432.678100000014002
...............................................................................................TGAGTCTTCGGCCAGTGCCTTCAAAG........................................2642.259000000100026
........................................................T-----GTTACTTAGCTGGGCAGCGGCTC............................................................................2452.20110000001000010
........................................................T-----GTTACTTAGCTGGGCAGCGG...............................................................................2152.2011000000001118
...................................................................................TCTGCT---CACTGAGTCTTCGGCCAGTGCCT..............................................2942.008000800000000
................................................................TACTTAGCTGGGCAGCGGCTCTGCT---.....................................................................2552.0010000000110008
...............................................................................................TGAGTCTTCGGCCAGTGCCTTCAAAGC.......................................2742.008000000211004
....................................................TTGTT-----GTTACTTAGCTGG......................................................................................1851.608000000000521
........................................................T-----GTTACTTAGCTGGGCAGCGGCTCTGC.........................................................................2751.608000000006002
.....................................................................................TGCT---CACTGAGTCTTCGGCCAGTGCC...............................................2641.506000000100014
........................................................T-----GTTACTTAGCTGGGCAGCGGCTCT...........................................................................2551.407000000011131
.....................................................................................................TTCGGCCAGTGCCTTCAAAGCGG.....................................2331.334000000010201
...................................................................................TCTGCT---CACTGAGTCTTCGGCC.....................................................2251.206000000013200
........................................................T-----GTTACTTAGCTGGGCAGCGGC..............................................................................2251.206000000100005
...................................................................................TCTGCT---CACTGAGTCTTCGGC......................................................2151.206000000030201
...................................................................................TCTGCT---CACTGAGTCTTCGGCCAGTG.................................................2641.004000000010201
.......................................................................................................CGGCCAGTGCCTTCAAAGCGGCGA..................................2431.003000000001002
........................................................T-----GTTACTTAGCTGGGCAGCGGCT.............................................................................2351.005000200000003
TGTATATTTGTTTCTCTT-AATGGAA.......................................................................................................................................2521.002000000020000
TGTATATTTGTTTCTCTT-AATGGA........................................................................................................................................2421.002000000000020
................................................CTCCTTGTT-----GTTACTTAGCTGGGCAGCGGC..............................................................................3051.005000000013100
....................................................TTGTT-----GTTACTTAGCT........................................................................................1651.005000000000014
.................................................TCCTTGTT-----GTTACTTAGCTGG......................................................................................2151.005000005000000
.......................................................................................................................AGCGGCGACTCAGCCCCCGCGTC...................2341.004000000000004
...............................................................................................TGAGTCTTCGGCCAGT..................................................1641.004000000000004
........................................................................TGGGCAGCGGCTCTGCT---CACTGAGTCTT..........................................................2851.005000000011111
.................................................TCCTTGTT-----GTTACTTAGCTGGGCAGC.................................................................................2651.005000000110012
.....................................................................................TGCT---CACTGAGTCTTCGGCCAG...................................................2250.804020000010010
................................................................................................................................TCAGCCCCCGCGTCCCCCTCGCAGTA.......2650.804000000100120
................................................................TACTTAGCTGGGCAGCGGCTCTGC.........................................................................2450.804000100003000
........................................................................................................................................CGCGTCCCCCTCGCAGTACGGTT..2350.804000000030100
........................................................................TGGGCAGCGGCTCTGCT---CACTGAGTC............................................................2650.804000000000004
.................................................................ACTTAGCTGGGCAGCGGC..............................................................................1850.804000000000004
................................................................TACTTAGCTGGGCAGCGGCTCTG..........................................................................2350.804000000000004
................................................................................................................................TCAGCCCCCGCGTCCCCCTCGCAGTACGGT...3050.804000000031000
...............................................................................................TGAGTCTTCGGCCAGTGCC...............................................1940.753000000000003
......................................................................................GCT---CACTGAGTCTTCGGCCAGTGCC...............................................2540.753000000000003
.....................................................................................TGCT---CACTGAGTCTTCGGCCAGT..................................................2340.753000000010020
.....................................................................................................TTCGGCCAGTGCCTTCAAAGCGGCG...................................2530.672000000000002
................................................................TACTTAGCTGGGCAGCGGC..............................................................................1950.603100000000200
........................................................................TGGGCAGCGGCTCTGCT---CACTGAGTCT...........................................................2750.603000000000012
........................................................T-----GTTACTTAGCTGGGCAGCGGCTCTGCT---.....................................................................2850.603000000001002
.....................................................TGTT-----GTTACTTAGCTGGGCAGC.................................................................................2250.603000000100011
.....................................................TGTT-----GTTACTTAGCTGGGCAGCGG...............................................................................2450.603000000001002
........................................................................TGGGCAGCGGCTCTGCT---.....................................................................1750.603000000000003
.................................................................ACTTAGCTGGGCAGCGG...............................................................................1750.603000000000003
.................................................TCCTTGTT-----GTTACTTAGCTGGGCAGCGG...............................................................................2850.603000000001101
.....................................................................................TGCT---CACTGAGTCTTCGGCCA....................................................2150.603000000010110
.....................................................................................TGCT---CACTGAGTCTTCGGCC.....................................................2050.603000300000000
...................................................CTTGTT-----GTTACTTAGCTGGGCAGCGGC..............................................................................2750.603000000012000
.....................TGGAAACCCGCCCCCCACAGGC-.....................................................................................................................2220.501000000000100
..................................................................................................................TTCAAAGCGGCGACTCAGCCCCCGCG.....................2640.502000000000002
....................................................................................CTGCT---CACTGAGTCTTCGGCCAGTGC................................................2640.502000000000002
.............................CGCCCCCCACAGGC-CCTTCT...............................................................................................................2020.501000000000001
....................................................................................CTGCT---CACTGAGTCTTCGGCCAGTGCC...............................................2740.502000000200000
..................................................................................................................TTCAAAGCGGCGACTCAGCCCCCGC......................2540.502000000000002
.....................................................................................TGCT---CACTGAGTCTTCGGCCAGTG.................................................2440.502000000000002
................................................................................................GAGTCTTCGGCCAGTGCC...............................................1840.502000000000002
.......................................................................................................................AGCGGCGACTCAGCCCCCGCGTCC..................2440.502000000000002
........................................................................................T---CACTGAGTCTTCGGCCAGT..................................................2040.502000000000002
................................................................................................................................TCAGCCCCCGCGTCCCCCTCGCAGTACGG....2950.402000000002000
................................................CTCCTTGTT-----GTTACTTAGCTGGGCAGCGG...............................................................................2950.402000000010010
.....................................................................................TGCT---CACTGAGTCTTCGGC......................................................1950.402000000010100
..............................................TTCTCCTTGTT-----GTTACTTAGCTGGGC....................................................................................2650.402000000000110
...................................................................TTAGCTGGGCAGCGGCTCTGCT---CACT.................................................................2650.402000000000002
...................................................................TTAGCTGGGCAGCGGCTCTGCT---CAC..................................................................2550.402000000000002
................................................................................GGCTCTGCT---CACTGAGTCTTCGGC......................................................2450.402000000101000
.................................................TCCTTGTT-----GTTACTTAGCTGGGCAG..................................................................................2550.402000000000110
.......................................................TT-----GTTACTTAGCTGGGCAGCGG...............................................................................2250.402000000000002
....................................................................TAGCTGGGCAGCGGCTCTGCT---.....................................................................2150.402000000000002
.....................................................................................................TTCGGCCAGTGCCTTCAAAGCGGCGAC.................................2730.331000000000010
..............................................................................................................TGCCTTCAAAGCGGCGACTCAGCCCC.........................2630.331000000100000
...........................................................................................................CAGTGCCTTCAAAGCGGCG...................................1930.331000000000001
..............................................................................................................TGCCTTCAAAGCGGCGACTCAGC............................2330.331000000100000
...............................................................................................TGAGTCTTCGGCCAGTGCCTTCAAAGCGGC....................................3030.331000000010000
...............................................................................................TGAGTCTTCGGCCAGTGCCTTCAAAGCGG.....................................2930.331000000010000
............................................................................................CACTGAGTCTTCGGCCAGTGCCTT.............................................2440.251000000100000
.....................................................................................................................AAAGCGGCGACTCAGCCCCCGCGTC...................2540.251000000000001
.................................................................................................................CTTCAAAGCGGCGACTCAGCCCC.........................2340.251000000000001
....................................................................................................CTTCGGCCAGTGCCTTCAAAGC.......................................2240.251000000000001
..................................................................................................GTCTTCGGCCAGTGCC...............................................1640.251000000000001
....................................................................................................CTTCGGCCAGTGCCTTCAA..........................................1940.251000000000001
.............................................................................................ACTGAGTCTTCGGCCAGT..................................................1840.251000000000001
.............................................................................................ACTGAGTCTTCGGCCAGTGCC...............................................2140.251000000000001
.........................................................................................................................CGGCGACTCAGCCCCCGCGTCC..................2240.251000000001000
...................................................................................................................TCAAAGCGGCGACTCAGCCCC.........................2140.251000000000001
.......................................................................................................................AGCGGCGACTCAGCCCCCGCGT....................2240.251000000000001
......................................................................................GCT---CACTGAGTCTTCGGCCAGT..................................................2240.251000000000001
...................................................................................TCTGCT---CACTGAGTCTTCGGCCAGTGCCTT.............................................3040.251000000000010
.......................................................................................................................AGCGGCGACTCAGCCCCCGCGTCCC.................2540.251000000000010
..................................................................................................................TTCAAAGCGGCGACTCAGCCCC.........................2240.251000000100000
...................................................................................................................TCAAAGCGGCGACTCAGCCCCCGCGTCC..................2840.251000000000001
...............................................................................................TGAGTCTTCGGCCAGTGCCTTC............................................2240.251000000010000
.....................................................................................................................AAAGCGGCGACTCAGCCCCCGCGT....................2440.251000000000001
..................................................................................................................TTCAAAGCGGCGACTCAGCC...........................2040.251000000000100
..................................................................................................................TTCAAAGCGGCGACTCAGCCCCCGCGT....................2740.251000000000001
...............................................................................................................GCCTTCAAAGCGGCGA..................................1640.251000000000001
....................................................................................CTGCT---CACTGAGTCTTCGGCCAGT..................................................2440.251000000010000
...............................................................................................TGAGTCTTCGGCCAGTGCCTTCAAA.........................................2540.251000000000001
..................................................................................................................TTCAAAGCGGCGACTCAGC............................1940.251000000000001
..................................................................................................................TTCAAAGCGGCGACTCAGCCCCCGCGTCC..................2940.251000000100000
.......................................................................................CT---CACTGAGTCTTCGGCCAGT..................................................2140.251000000000001
..................................................................................................................TTCAAAGCGGCGACTCAGCCC..........................2140.251000000000001
...............................................................................................TGAGTCTTCGGCCAGTGCCTTCAA..........................................2440.251000000000001
................................................................TACTTAGCTGGGCAGCGGCTCTGCT---CA...................................................................2750.201000000000001
................................................................TACTTAGCTGGGCAGCGGCTCTGCT---C....................................................................2650.201000000000010
............................................................................................................................CGACTCAGCCCCCGCGTCCCCCTCGC...........2650.201000000000001
................................................................................................................................TCAGCCCCCGCGTCCCCCTCGCAGT........2550.201000000000001
..............................................................GTTACTTAGCTGGGCAGCGG...............................................................................2050.201000000000001
.................................................................................GCTCTGCT---CACTGAGTCT...........................................................1850.201000000000001
....................................................................................CTGCT---CACTGAGTCTTCGGCC.....................................................2150.201000000001000
...............................................TCTCCTTGTT-----GTTACTTAGCTGGGC....................................................................................2550.201000000000001
....................................................TTGTT-----GTTACTTAGCTGGGCAGCGGCTCTG..........................................................................3050.201000000010000
....................................................TTGTT-----GTTACTTAGCTGGGCAGCGGCTC............................................................................2850.201000000001000
.............................................................................AGCGGCTCTGCT---CACTGAGTCTTCG........................................................2550.201000000000001
..............................................................................................................................................CCCCTCGCAGTACGGT...1650.201000000000001
.......................................................TT-----GTTACTTAGCTGGGCAGCGGCT.............................................................................2450.201000000000001
.............................................................................AGCGGCTCTGCT---CACTGAGTCTTCGGC......................................................2750.201000000001000
.....................................................TGTT-----GTTACTTAGCTGGGCAGCGGCTCT...........................................................................2850.201000000010000
....................................................................TAGCTGGGCAGCGGCTCTGC.........................................................................2050.201000000000001
...................................................................TTAGCTGGGCAGCGGCTCTG..........................................................................2050.201000000000001
..............................................................GTTACTTAGCTGGGCAGC.................................................................................1850.201000000000001
.......................................................TT-----GTTACTTAGCTGGGCAGCGGCTC............................................................................2550.201000000000001
........................................................................................T---CACTGAGTCTTCGGCCA....................................................1850.201000000000001
.................................................................ACTTAGCTGGGCAGCGGCTC............................................................................2050.201000000000001
..............................................................GTTACTTAGCTGGGCAGCGGCTCTG..........................................................................2550.201000000100000
............................................................................................CACTGAGTCTTCGGCCAG...................................................1850.201000000000100
....................................................TTGTT-----GTTACTTAGCTGGGCAGCGGCT.............................................................................2750.201000000010000
........................................................................TGGGCAGCGGCTCTGC.........................................................................1650.201000000000001
...............................................................................................TGAGTCTTCGGCCAG...................................................1550.201000000000001
....................................................................TAGCTGGGCAGCGGCTC............................................................................1750.201000000000001
..............................................................GTTACTTAGCTGGGCAGCGGC..............................................................................2150.201000000000001
................................................CTCCTTGTT-----GTTACTTAGCTGGGCAGCG................................................................................2850.201000000000010
......................................................GTT-----GTTACTTAGCTGGGCAGCGGCT.............................................................................2550.201000000000001
............................................................................................................................................TCCCCCTCGCAGTACGGT...1850.201000000100000
.................................................TCCTTGTT-----GTTACTTAGCT........................................................................................1950.201000000000001
........................................................................TGGGCAGCGGCTCTGCT---CA...................................................................1950.201000000000001
........................................................T-----GTTACTTAGCTGGGCAG..................................................................................1850.201000000000001
.....................................................................................................................................CCCCGCGTCCCCCTCGCAGTACGGTT..2650.201000000100000
...................................................................TTAGCTGGGCAGCGG...............................................................................1550.201000000000001
...................................................................................TCTGCT---CACTGAGTC............................................................1550.201000000000001
.................................................................ACTTAGCTGGGCAGCGGCTCT...........................................................................2150.201000000000001
....................................................TTGTT-----GTTACTTAGCTG.......................................................................................1750.201000000000001
....................................................TTGTT-----GTTACTTAGCTGGG.....................................................................................1950.201000000010000
.....................................................TGTT-----GTTACTTAGCTGGGCAG..................................................................................2150.201000000000010
......................................................................................GCT---CACTGAGTCTTCGGCCAG...................................................2150.201000000000001
.....................................................................................................................................CCCCGCGTCCCCCTCGCAGTACGGT...2550.201000000000010
...............................................................TTACTTAGCTGGGCAGCGGCTCTGCT---.....................................................................2650.201000000001000
........................................................T-----GTTACTTAGCTGGGCA...................................................................................1750.201000000000001
......................................................................................................................................CCCGCGTCCCCCTCGCAGTACGGT...2450.201000000010000
.......................................AGGC-CCTTCTCCTTGT.........................................................................................................1650.201000000000001
....................................................................................................CTTCGGCCAGTGCCT..............................................1550.201000000000001
....................................................................................................................................CCCCCGCGTCCCCCTCGCAGTACGGTT..2750.201000000000100
........................................................................................................................................CGCGTCCCCCTCGCAGTACGGT...2250.201000000001000
........................................................T-----GTTACTTAGCTGGGCAGCG................................................................................2050.201000000000001
.................................................................ACTTAGCTGGGCAGC.................................................................................1560.171000000000001
.............................................................................................................................GACTCAGCCCCCGCGTC...................1770.141000000000001
............................................................................................................................CGACTCAGCCCCCGCGT....................1770.141000000000001
droSec2
TA--TATTTGTTTGCCTT-AGTGGAAACCCGCTCCCCGCAGGC-CCTTCGCCTTATT-----GTTACTTAGCTGGGCAGCGGCTCTGCT---CACCGAGTCTTCATCCAGTGCCTTCAAAGCGGCTATTCAGCCCCCGCGACCCCCTCGCCGTACTGTTTGSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
No Reads
droEre2
TGTATATTTGTTTGCCTT-ATTGGAGACCCGCTCCCCGCAGGC-CCTTCACCTTATC-----GTTACTTAGCTAGGCAGTGGCTCTGCT---CATTGAGTCTTCGTCCAATGCCTTCAAAGCGGCGACTCAGCCCCCGCGACCCCCTTGCCGTACTGTTTGSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
................................................................................................................................TCAGCCCCCGCGACCCCCTTGCCGTAC......2730.331000010
droYak3
TGTATATTTGTTTGCCTT-ATTGGAGACCCGCTCCCCGCAGGC-CCTTCACCTTATC-----GTTACTTAGCTAGGCAGTGGCTCTGCT---CGTTGAGTCTTCGTCCAATGCCTTCAAAGCGGCGACTCAGCCCCCGCGACCCCCTTGCCGTACTGTTTGSizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
.......................................................TC-----GTTACTTAGCTAGGCAGTGGC..............................................................................2333.671100000110
.......................................................TC-----GTTACTTAGCTAGGCAGTGGCTC............................................................................2533.33100000082
.......................................................TC-----GTTACTTAGCTAGGCAGTGGCT.............................................................................2431.3340010012
..................................................................................................................TTCAAAGCGGCGACTCAGCCCCCGCGACC..................2931.0030000003
...................................................................................TCTGCT---CGTTGAGTCTTCGTCCAATGCC...............................................2831.0030000030
.....................................................................................................TTCGTCCAATGCCTTCAAAGCGGC....................................2430.6720000011
.....................................................................................TGCT---CGTTGAGTCTTCGTCCAATGCCT..............................................2730.6720000011
.......................................................TC-----GTTACTTAGCTAGGCAGTGG...............................................................................2230.6720000011
......................................................................................GCT---CGTTGAGTCTTCGTCCAATGCC...............................................2530.6720000011
..........................................................................................................................GGCGACTCAGCCCCCGCGACCCCCTTG............2730.6720000020
................................................................................................................................TCAGCCCCCGCGACCCCCTTGCCGTAC......2730.6720000011
..............CCTT-ATTGGAGACCCGCTCCCCGC..........................................................................................................................2430.6720000020
...................................................................................................................TCAAAGCGGCGACTCAGCCCCCGCGAC...................2730.6720000020
.......................................................TC-----GTTACTTAGCTAGGCAGTGGCTCT...........................................................................2630.3310000010
................................TCCCCGCAGGC-CCTTCACCTTA..........................................................................................................2230.3310000010
...............................................................................................................................CTCAGCCCCCGCGACCCCCTTGCCG.........2530.3310000010
...................................................................................TCTGCT---CGTTGAGTCTTCGTCCAATG.................................................2630.3310000001
.....................................................................................TGCT---CGTTGAGTCTTCGTCCAATGCC...............................................2630.3310000010
..............................................................................................................TGCCTTCAAAGCGGCGACTCAGCCCC.........................2630.3310000010
............................................................................................................AATGCCTTCAAAGCGGCGACTCAG.............................2430.3310000010
........................................................C-----GTTACTTAGCTAGGCAGTGGCTC............................................................................2430.3310000010
.....................................................................................................................................CCCCGCGACCCCCTTGCCGTACTGTT..2630.3310000010
................................................................................................................................TCAGCCCCCGCGACCCCCTTGCCG.........2430.3310000010
......TTTGTTTGCCTT-ATTGGAGACCCGC.................................................................................................................................2530.3310000010
.................................................................................................................................CAGCCCCCGCGACCCCCTTGCCGTAC......2630.3310000010
......................................................................................................TCGTCCAATGCCTTCAAAGCGG.....................................2230.3310000010
...................................................................................................TCTTCGTCCAATGCCTTCAAAGCGG.....................................2530.3310000010
........................................................................................T---CGTTGAGTCTTCGTCCAATGCCTTC............................................2630.3310000010
.......................................................................................................................AGCGGCGACTCAGCCCCCGCGACC..................2460.1710000001
.........................................................................................................................CGGCGACTCAGCCCCCGCGACCC.................2370.1410000010
droEug1
TATATTTTTTTTTGCCAT-AGCGGAGACCCGGTCCCCGCGACCCCCTTCCCCTAGTC-----ATTGCTTGGCAAGGCAACAGCTCAGTTTTTCAACGAGCTCTCGTCCATTGTTATC-AAGCGGCAACTCAGCCCCCGCGGCTCCCTCGCCATA-------SizeHit CountTotal NormTotal
No Reads
droBia1
T------TGGTTTGCCAT-AGCGGAGGCTCGTTACCCACCCAC-CCCTCACCTTGTC-----ACTGCCTGGCAAGGCAACGACTCAGGT---TGAACAGCC-CCATCCATCGTGGTCAAAGCGGCGACTCAGCCCCCGCGTCCCCCTTGACAAGCCAGCTGSizeHit CountTotal NormTotal
No Reads
droEle1
C-----TTTGTTTATCGT-AGCAGAGGCTTGGTCCCCAC---------------------------------AAGGCGGCAGCTCAGTT---CGACGAGCTCACTTACATCGTTGCTAAGGCGGCGGCTCCGTCCCCGCATACCCCTTGCCATGCCAACTGSizeHit CountTotal NormTotal
No Reads
droRho1
TATATTTTTGTTTGCCAT-AGCGGAGACCCGGTCCCCGCGATCCCCTTCCCCTTGTTAAGCAATTGCTTGACAAGGCAAAAGCTCAGTTTTTCAACGAGCTTTCGTCCATCGTT-ACGAAGCGGCATATCAGCCCCCGCGTCCCCCTCGCCATA-------SizeHit CountTotal NormTotal
No Reads
droKik1
TATATATTGGTTCGCCAT-AGCGGAGACCCGGTCCCCGCGATCCCCTTTCCCTTGTC-----ATTGCTTGGCAAGGCAACAGCTCAGTTTT-TAACTAGCTCTCGTCCATCGTTGCC-AAGCGGCAACTCAGCCCCCGCGGCCCCCTCGCCATA-------SizeHit CountTotal NormTotal
No Reads
droAna3
CATTTCTTTGTTTCTCAT-AGCGGAGGCTCTGTCCCCGCATAC-CCTTGACCTTGTC-----GCTGCTTGGCAGGGCACCGGCTCGATT---TGACGAGCTCATTTA-CTTGTCGCTAGAGCGGCGGCTCCGACCCCGCACACCCCTTGCCATGCCAACTGSizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
................................................................................................................................TCCGACCCCGCACACCCCTTGCCATGCC.....28200.051000010
...................................................................................TCGATT---TGACGAGCTCATTTA-CTTG.................................................25200.051000010
.................................................................................................................................CCGACCCCGCACACCCCTTGCCATGC......26200.051000010
...................................................................TTGGCAGGGCACCGGCTCGATT---TG...................................................................24200.051000010
droBip1
TTTTTCTTTGTTTATAATAAGCGGAGGCTCAGTCCCCGCACAC-CCCTCACCTTGTC-----TTTACTTGGCAAGGCAACAGCGCAGTT---TAACGAGCTCGCACACTTA---ATTGAAGCGGCGGCTCAGCCCCCGCGACCCCCCCACAAGCCCAACTGSizeHit CountTotal NormTotal
No Reads

Generated: 12/06/2013 at 02:29 PM