ID:

dsi_45

 Coordinate:

chr2h_Mrandom_015:118245-118295 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.5

Flybase annnotation

intergenic

Repeatable elements

NameClassFamily
Gypsy1-I_DM-intLTRGypsy

Sense Strand Reads

TGTATATTTGTTTCTCTTGATGGAAACCCGCCCCCTACAGGCCCTTCTCCTTGTTGTTACTTAGCTGGGCAGCGGCTCTGCTCACTGAGTCTTCGGCCAGGGCCTTCAAAGCGGCGACTCAGCCCCCGCGTCCCCCTCGCAGTACGGTTTG
***********************************...(((((((.......((((..((((((.(((((((.....)))))))))))))...)))).)))))))..........************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553488
Ovary		 SRR553486
Ovary		 SRR553487
Ovary		 SRR618934
Ovary		 SRR553485
Ovary		 M025
embryo
 M053
Female-body		 GSM343915
embryo
 O002
Head
 M023
head
............................................................................TCTGCTCACTGAGTCTTCGGCCAGGG................................................. 26 0 1 78.00 78 26 38 2 3 0 8 1 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCCAG................................................... 24 0 5 71.60 358 49 34 93 8 65 103 5 1 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGGC........................................................................... 26 0 5 65.40 327 60 87 70 17 78 0 12 3 0 0
..................................................TTGTTGTTACTTAGCTGGGCAG............................................................................... 22 0 5 42.40 212 60 29 93 0 30 0 0 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCCAGG.................................................. 25 0 1 30.00 30 15 10 0 0 0 5 0 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCCAGGGC................................................ 27 0 1 26.00 26 16 7 0 0 0 3 0 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCCA.................................................... 23 0 5 20.40 102 26 21 23 6 26 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGC.............................................................................. 23 0 5 18.60 93 21 17 33 9 10 0 3 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCCAGGGCC............................................... 28 0 1 18.00 18 5 1 0 9 0 0 3 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGG............................................................................ 25 0 5 12.00 60 18 8 5 20 3 0 4 2 0 0
..................................................TTGTTGTTACTTAGCTGGGCA................................................................................ 21 0 5 8.40 42 4 7 20 2 9 0 0 0 0 0
...................................................TGTTGTTACTTAGCTGGGCAGCGGC........................................................................... 25 0 5 6.60 33 5 9 5 9 5 0 0 0 0 0
...............................................TCCTTGTTGTTACTTAGCTGGGCAGCGGC........................................................................... 29 0 5 6.20 31 11 10 7 0 2 0 1 0 0 0
....................TGGAAACCCGCCCCCTACAGGCCCTTC........................................................................................................ 27 0 2 5.50 11 3 2 3 0 3 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGC................................................................................. 20 0 5 5.00 25 2 9 1 2 8 1 0 2 0 0
......................................................TGTTACTTAGCTGGGCAGCGGCTCTG....................................................................... 26 0 5 4.80 24 4 1 1 13 2 1 1 1 0 0
........................................................................................................TTCAAAGCGGCGACTCAGCCCCCGCGTC................... 28 0 4 3.50 14 1 0 0 8 0 0 5 0 0 0
.....................................................................................TGAGTCTTCGGCCAGGGCCTTCAAAGC....................................... 27 0 1 3.00 3 1 0 0 2 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCG............................................................................. 24 0 5 3.00 15 3 0 3 5 0 0 4 0 0 0
.............................................................................................CGGCCAGGGCCTTCAAAGCGGCG................................... 23 0 1 3.00 3 0 0 0 3 0 0 0 0 0 0
......................................................TGTTACTTAGCTGGGCAGCGG............................................................................ 21 0 5 2.20 11 1 1 1 8 0 0 0 0 0 0
......................................................TGTTACTTAGCTGGGCAGCGGCTC......................................................................... 24 0 5 2.20 11 0 0 0 10 0 0 1 0 0 0
......................................................................................GAGTCTTCGGCCAGGG................................................. 16 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0
.........................................................TACTTAGCTGGGCAGCGGCTCTGCT..................................................................... 25 0 5 2.00 10 0 0 0 8 1 0 1 0 0 0
.................................................................................TCACTGAGTCTTCGGCCAGGGCCTTC............................................ 26 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0
......................................................TGTTACTTAGCTGGGCAGCGGCTCTGC...................................................................... 27 0 5 1.60 8 0 6 0 2 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGG................................................................................... 18 0 5 1.60 8 2 0 5 1 0 0 0 0 0 0
................TTGATGGAAACCCGCCCCCTACAGGCCC........................................................................................................... 28 0 2 1.50 3 0 0 0 0 2 0 1 0 0 0
......................................................TGTTACTTAGCTGGGCAGCGGCTCT........................................................................ 25 0 5 1.40 7 3 1 1 1 1 0 0 0 0 0
TGTATGTTTGTTTCTCTTGATGGAA.............................................................................................................................. 25 1 3 1.33 4 0 0 3 0 1 0 0 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGC...................................................... 21 0 5 1.20 6 0 0 2 1 3 0 0 0 0 0
......................................................TGTTACTTAGCTGGGCAGCGGC........................................................................... 22 0 5 1.20 6 0 0 0 5 0 0 1 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCC..................................................... 22 0 5 1.20 6 0 3 2 0 1 0 0 0 0 0
.................................................................................TCACTGAGTCTTCGGCCAGGGCCTT............................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................TTCGGCCAGGGCCTTCAAAGCGGCGAC................................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................TGAGTCTTCGGCCAGGGC................................................ 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCT..................................................................................... 16 0 5 1.00 5 1 0 0 4 0 0 0 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCCAGGGCCTC............................................. 30 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCCAGGGCCT.............................................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................CTCACTGAGTCTTCGGCCAGGGC................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................TTCGGCCAGGGCCTTCAAAGCGGC.................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCCAGGGCCTT............................................. 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................GCTCACTGAGTCTTCGGCCAGGGC................................................ 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................................................TGTTACTTAGCTGGGCAGCGGCT.......................................................................... 23 0 5 1.00 5 0 0 0 3 0 2 0 0 0 0
...........................................................................................TTCGGCCAGGGCCTTCAAAGCGGCGA.................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................CGGCCAGGGCCTTCAAAGCGGCGAC................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................TCTTCGGCCAGGGCCTTCAAAGCGGCGAC................................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................TGCTCACTGAGTCTTCGGCCAGGGC................................................ 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
............................................................................TCTGCTCACTGAGCCTTCGGCCAGGG................................................. 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................TGGAAACCCGCCCCCTACAGGCCCTT......................................................................................................... 26 0 2 1.00 2 0 1 0 0 0 0 1 0 0 0
..............................................................................TGCTCACTGAGTCTTCGGCCAGGG................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................................AGCGGCGACTCAGCCCCCGCGTC................... 23 0 4 1.00 4 0 0 0 4 0 0 0 0 0 0
...................................................................................ACTGAGTCTTCGGCCAGGGCC............................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..............................................CTCCTTGTTGTTACTTAGCTGGGCAGCGGC........................................................................... 30 0 5 1.00 5 0 3 1 0 1 0 0 0 0 0
.....................................................................................TGAGTCTTCGGCCAGGGCCTTCAAAGT....................................... 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
............................................................................................TCGGCCAGGGCCTTCAAAGCGGCGAC................................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..............................................................................TGCTCACTGAGTCTTCGGCCAGGGCC............................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...............................................TCCTTGTTGTTACTTAGCTGG................................................................................... 21 0 5 1.00 5 0 0 0 0 0 0 0 0 5 0
..............................................................................TTCTCACTGAGTCTTCGGCCAGGGC................................................ 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................TGAGTCTTCGGCCAGGGCCTTTACT......................................... 25 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................TCTTCGGCCAGGGCCTTCAAAGCGGCG................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................TCCTTGTTGTTACTTAGCTGGGCAGC.............................................................................. 26 0 5 1.00 5 1 0 0 2 1 0 1 0 0 0
.................................................................TGGGCAGCGGCTCTGCTCACTGAGTCTT.......................................................... 28 0 5 1.00 5 1 1 1 1 1 0 0 0 0 0
......................................................................................................................TCAGCCCCCGCGTCCCCCTCGCAGTACGGT... 30 0 5 0.80 4 0 1 0 0 3 0 0 0 0 0
.................................................................TGGGCAGCGGCTCTGCTCACTGAGTC............................................................ 26 0 5 0.80 4 0 0 0 4 0 0 0 0 0 0
.........................................................TACTTAGCTGGGCAGCGGCTCTG....................................................................... 23 0 5 0.80 4 0 0 0 4 0 0 0 0 0 0
..........................................................ACTTAGCTGGGCAGCGGC........................................................................... 18 0 5 0.80 4 0 0 0 4 0 0 0 0 0 0
..............................................................................TGCTCACTGAGTCTTCGGCCAG................................................... 22 0 5 0.80 4 1 0 0 0 1 0 0 0 0 2
.........................................................TACTTAGCTGGGCAGCGGCTCTGC...................................................................... 24 0 5 0.80 4 0 3 0 0 0 1 0 0 0 0
......................................................................................................................TCAGCCCCCGCGTCCCCCTCGCAGTA....... 26 0 5 0.80 4 2 0 1 0 0 0 1 0 0 0
..............................................................................................................................CGCGTCCCCCTCGCAGTACGGTT.. 23 0 5 0.80 4 0 0 1 0 3 0 0 0 0 0
...................................TACAGGCCCTTCTCCTTGTTGTTAC........................................................................................... 25 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0
.................................................................TGGGCAGCGGCTCTGCTCACTGAGTCT........................................................... 27 0 5 0.60 3 1 0 0 2 0 0 0 0 0 0
...................................................TGTTGTTACTTAGCTGGGCAGCGG............................................................................ 24 0 5 0.60 3 0 1 0 2 0 0 0 0 0 0
..............................................................................TGCTCACTGAGTCTTCGGCC..................................................... 20 0 5 0.60 3 0 0 0 0 0 3 0 0 0 0
..............................................................................TGCTCACTGAGTCTTCGGCCA.................................................... 21 0 5 0.60 3 1 0 1 0 1 0 0 0 0 0
......................................................TGTTACTTAGCTGGGCAGCGGCTCTGCT..................................................................... 28 0 5 0.60 3 0 1 0 2 0 0 0 0 0 0
..........................................................ACTTAGCTGGGCAGCGG............................................................................ 17 0 5 0.60 3 0 0 0 3 0 0 0 0 0 0
.................................................................TGGGCAGCGGCTCTGCT..................................................................... 17 0 5 0.60 3 0 0 0 3 0 0 0 0 0 0
.................................................CTTGTTGTTACTTAGCTGGGCAGCGGC........................................................................... 27 0 5 0.60 3 0 2 0 0 1 0 0 0 0 0
...................................................TGTTGTTACTTAGCTGGGCAGC.............................................................................. 22 0 5 0.60 3 1 0 0 1 0 0 1 0 0 0
.........................................................TACTTAGCTGGGCAGCGGC........................................................................... 19 0 5 0.60 3 0 0 2 0 0 0 0 1 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGA.............................................................................. 23 1 5 0.60 3 0 1 2 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGGA........................................................................... 26 1 5 0.60 3 2 0 0 1 0 0 0 0 0 0
...............................................TCCTTGTTGTTACTTAGCTGGGCAGCGG............................................................................ 28 0 5 0.60 3 0 1 1 1 0 0 0 0 0 0
..................GATGGAAACCCGCCCCCTACAGGC............................................................................................................. 24 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0
....................TGGAAACCCGCCCCCTACAGGTTCTTC........................................................................................................ 27 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0
....................TGGAAACCCGCCCCCTACAGGCCCT.......................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................TTCAAAGCGGCGACTCAGCCCCCGC...................... 25 0 4 0.50 2 0 0 0 2 0 0 0 0 0 0
........................................................................................................TTCAAAGCGGCGACTCAGCCCCCGCG..................... 26 0 4 0.50 2 0 0 0 2 0 0 0 0 0 0
........................AACCCGCCCCCTACAGGCCCTTCTCC..................................................................................................... 26 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................AGCGGCGACTCAGCCCCCGCGTCC.................. 24 0 4 0.50 2 0 0 0 2 0 0 0 0 0 0
.........................ACCCGCCCCCTACAGGCCCTTCTCC..................................................................................................... 25 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0
....................TGGAAACCCGGCCCCTCCAGGCCCTT......................................................................................................... 26 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0
..........................CCCGCCCCCTACAGGCCCTTCTCC..................................................................................................... 24 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0
............................CGCCCCCTACAGGCCCTTCTCCTT................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
..................................................TTTTTGTTACTTAGCTGGGCAGCGGC........................................................................... 26 1 5 0.40 2 0 0 0 0 2 0 0 0 0 0
............................................................................TCTGCTCACTGGGTCTTCGGCCAG................................................... 24 1 5 0.40 2 0 0 1 0 0 1 0 0 0 0
...............................................TCCTTGTTGTTACTTAGCTGGGCAG............................................................................... 25 0 5 0.40 2 1 0 1 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGGCA.......................................................................... 27 1 5 0.40 2 0 0 0 1 0 0 1 0 0 0
............................................................TTAGCTGGGCAGCGGCTCTGCTCACT................................................................. 26 0 5 0.40 2 0 0 0 2 0 0 0 0 0 0
............................................................TTAGCTGGGCAGCGGCTCTGCTCAC.................................................................. 25 0 5 0.40 2 0 0 0 2 0 0 0 0 0 0
............................................TTCTCCTTGTTGTTACTTAGCTGGGC................................................................................. 26 0 5 0.40 2 1 0 1 0 0 0 0 0 0 0
.............................................................TAGCTGGGCAGCGGCTCTGCT..................................................................... 21 0 5 0.40 2 0 0 0 2 0 0 0 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGTCAG................................................... 24 1 5 0.40 2 0 0 1 0 0 1 0 0 0 0
..............................................................................TGCTCACTGAGTCTTCGGC...................................................... 19 0 5 0.40 2 0 0 1 0 1 0 0 0 0 0
.........................................................................GGCTCTGCTCACTGAGTCTTCGGC...................................................... 24 0 5 0.40 2 0 1 0 0 0 0 1 0 0 0
..............................................CTCCTTGTTGTTACTTAGCTGGGCAGCGG............................................................................ 29 0 5 0.40 2 1 0 0 0 1 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGGT........................................................................... 26 1 5 0.40 2 0 0 0 2 0 0 0 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCCGG................................................... 24 1 5 0.40 2 0 0 0 0 0 2 0 0 0 0
......................................................................................................................TCAGCCCCCGCGTCCCCCTCGCAGTACGG.... 29 0 5 0.40 2 0 2 0 0 0 0 0 0 0 0
.....................................................TTGTTACTTAGCTGGGCAGCGG............................................................................ 22 0 5 0.40 2 0 0 0 2 0 0 0 0 0 0
......TTTGTTTCTCTTGATGGAAACCCGGC....................................................................................................................... 26 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.......TTGTTTCTCTTGATGGAAACCCGGC....................................................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
TGTATATTTGTTTCTCTTGATGGAAACC........................................................................................................................... 28 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
...ATATTTGTTTCTCTTGA................................................................................................................................... 17 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0
TGTATATTTGTTTCTCTTGATGGAAAC............................................................................................................................ 27 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
......TTTGTTTCTCTTGATGGA............................................................................................................................... 18 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
TGTATGTTTGTTTCTCTTGATGGA............................................................................................................................... 24 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0
...................................TACAGGCCCTTCTCCTTGTTGTTACT.......................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
......TTTGTTTCTCTTGATG................................................................................................................................. 16 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0
........................................................................................................TTCAAAGCGGCGACTCAGCCC.......................... 21 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0
........................................................................................................TTCAAAGCGGCGACTCAGCCCCCGCGT.................... 27 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................................AGCGGCGACTCAGCCCCCGCGT.................... 22 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................................AGCGGCGACTCAGCCCCCGCGTCCC................. 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................CTTCAAAGCGGCGACTCAGCCCC......................... 23 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................GCCTTCAAAGCGGCGA.................................. 16 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0
........................................................................................................TTCAAAGCGGCGACTCAGCCCCCGCGTCA.................. 29 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0
...........................................................................................................AAAGCGGCGACTCAGCCCCCGCGT.................... 24 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0
........................................................................................................TTCAAAGCGGCGACTCAGC............................ 19 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................................AAAGCGGCGACTCAGCCCCCGCGTC................... 25 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................TCAAAGCGGCGACTCAGCCCCCGCGTCC.................. 28 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0
................................................................................................................GGCGACTCAGCCCCCGCGGCCCCCTC............. 26 1 4 0.25 1 0 0 0 0 0 0 1 0 0 0
........................................................................................................TTCAAAGCGGCGACTCAGCCCCCGCGTCC.................. 29 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0
........................................................................................................TTCAAAGCGGCGACTCAGCCCC......................... 22 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0
........................................................................................................TTCAAAGCGGCGACTCAGCC........................... 20 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................................TCAAAGCGGCGACTCAGCCCC......................... 21 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0
........................................................................................................TTCAAAGCGGCGACCCAGCCCCCGCG..................... 26 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0
...............................................................................................................CGGCGACTCAGCCCCCGCGTCC.................. 22 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.............................................................................CTGCTCACTGAGTCTTCGGCC..................................................... 21 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGTCC............................................................................ 25 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.....................................................TTGTTGTTTAGCTGGGCAGCGGC........................................................................... 23 2 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................TTATTGTTACTTAGCTGGGCAG............................................................................... 22 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
............................................................................TCTGCTCGCTGAGTCTTCGGCCAA................................................... 24 2 5 0.20 1 0 0 0 0 0 1 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGGCTCTT....................................................................... 30 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCCGCGGC........................................................................... 26 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGTAGCGGC........................................................................... 26 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGGCT.......................................................................... 27 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGTAGCG............................................................................. 24 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
......................................................................AGCGGCTCTGCTCACTGAGTCTTCG........................................................ 25 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..................................................TGGTTGTTACTTAGCTGGGCAG............................................................................... 22 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGAA........................................................................... 26 2 5 0.20 1 0 0 1 0 0 0 0 0 0 0
......................................................TGTTACTTAGCTGGCCAGCGGCTCTAA...................................................................... 27 3 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..................................................................................................................CGACTCAGCCCTCGCGTCCCCCTC............. 24 1 5 0.20 1 0 0 0 0 0 0 1 0 0 0
............................................................TTAGCTGGGCAGCGGCTCTG....................................................................... 20 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
.............................................................TAGCTGGGCAGCGGCTC......................................................................... 17 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
...................................................TGTTGTTACTTAGCTGGGCAGCGAC........................................................................... 25 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
............................................................................TCTGTCCACTGAGTCTTCGGCCAG................................................... 24 2 5 0.20 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................CCCCTCGCAGTACGGT... 16 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
...................................................TGTTGTTACTTAGCTGGGCAGCGGCTCT........................................................................ 28 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
......................................................TGTTACTTAGCTGGGCA................................................................................ 17 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
.............................................TCTCCTTGTTGTTACTTAGCTGGGC................................................................................. 25 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
.........................................................TACTTAGCTGGGCAGCGGCTCTGCC..................................................................... 25 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0
...................................................TGTTGTTACTTAGCTGGGCAG............................................................................... 21 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.....................................................TGTTTACTTAGCTGGGCAGCGGC........................................................................... 23 2 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.......................................................GTTACTTAGCTGGGCAGC.............................................................................. 18 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
...........................................................CTTAGCTGGGCAGCGGCTT......................................................................... 19 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGTTGGGCAGCGGC........................................................................... 26 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................CCCCGCGTCCCCCTCGCAGTACGGT... 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................TGAGTCTTCGGCCAG................................................... 15 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGC............................................................................ 25 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..........................................................ACCTAGCTGGGCAGCGGCTCTGCTCAC.................................................................. 27 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
............................................................TTAGCTGGGCAGCGG............................................................................ 15 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
.........................................................TACTTAGCTGGGCAGCGGCTCTGCTC.................................................................... 26 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.................................................................TGGGCAGCGGCTCTGC...................................................................... 16 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
........................................................TTACTTAGCTGGGCAGCGGCTCTGCT..................................................................... 26 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
...............................................................................GCTCACTGAGTCTTCGGCCAG................................................... 21 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..........................CCTGCCCCCTACAGG.............................................................................................................. 15 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
......................................AGGCCCTTCTCCTTGT................................................................................................. 16 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..........................................................................GCTCTGCTCACTGAGTCT........................................................... 18 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGGAA............................................................................ 25 3 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAA............................................................................... 22 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0
......................................................TGTTACTTAGCTGGGCAGCTGCTCTGCT..................................................................... 28 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
......................................................TGTTACTTAGCTGGGCAGCGGCTCCGC...................................................................... 27 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.........................................................TAGTTAGGTGGGCAGCGGCTCTGCTCAC.................................................................. 28 2 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGTTGGGCAGC.............................................................................. 23 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
............................................................................TCTGCTCACTGAGGCTTCGGCCAG................................................... 24 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0
....................................................GTTGTTACTTAGCTGGGCAGCGGCT.......................................................................... 25 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
........................................................................................................................AGCCCCCGCGTCTCCCTCGCAGTACGGT... 28 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCCG............................................................................... 22 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.....................................................TTGTTACTTAGCTGGGCAGCGGCT.......................................................................... 24 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
...................................................TATTGTTAGTTAGGTGGGCAGCGGC........................................................................... 25 3 5 0.20 1 0 0 0 0 1 0 0 0 0 0
...............................................TCCTTGTTGTTACTTAGCT..................................................................................... 19 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGGCC.......................................................................... 27 1 5 0.20 1 0 0 0 0 0 0 1 0 0 0
......................................................TGTTACTTAGCTGGGCCGCGGCT.......................................................................... 23 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.................................................................TGGGCAGCGGCTCTGCTCA................................................................... 19 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................TCAGCCCCCGCGTCCCCCTCCCAGTAC...... 27 1 5 0.20 1 0 0 0 0 0 0 1 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGGCTCTG....................................................................... 30 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
............................................................................TCTGCTCACTAAGTCTTCGGCCAG................................................... 24 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.................................................................TGAGCAGCGGCTCTGCTCACTGAGTCTT.......................................................... 28 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGA............................................................................ 25 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
............................................................................................................................CCCGCGTCCCCCTCGCAGTACGGT... 24 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGCC........................................................................... 26 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTATCTGGGCAGC.............................................................................. 23 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.........................................................TACTTAGCTGGGCAGCGGCTCTGCTCA................................................................... 27 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
......................................................TGTTACTTAGCTGGGCAG............................................................................... 18 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
......................................................TGTTACTTAGCTGGGCAGCG............................................................................. 20 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCCGGGCAGCGGC........................................................................... 26 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
............................................TTCTCCTTGTTGTTACTTAGCA..................................................................................... 22 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.....................................................TTGTTACTTAGCTGGGCAGCGGCTC......................................................................... 25 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
...................................................TGTTGTTACTTAGCTGGCCAGCGGC........................................................................... 25 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
............................................................................TCTGCTCACTGAGTCTTCGGCTT.................................................... 23 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0
.................................................................................TCACTGAGTCTTCGGCCA.................................................... 18 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
...................................................CTTTGTTACTTAGCTGGGCAGCGG............................................................................ 24 2 5 0.20 1 0 0 1 0 0 0 0 0 0 0
..........................................................ACTTAGCTGGGCAGCGGCTC......................................................................... 20 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGT............................................................................ 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTTGGCAGCGG............................................................................ 25 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTG.................................................................................... 17 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..................................................TTGTTGGTACTTAGCTGGGT................................................................................. 20 2 5 0.20 1 0 0 0 0 0 0 0 1 0 0
...................................................TGTTGTTACTTAGCTGGGCAGCGGCA.......................................................................... 26 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
...................................................TATTGTTACTTAGCTGGGCAGCGGC........................................................................... 25 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
......................................................TGTTACTTAGCTGGGCAGCGGCCTCG....................................................................... 26 3 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCAGCGGCTC......................................................................... 28 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................TCCCCCTCGCAGTACGGT... 18 0 5 0.20 1 0 0 0 0 0 0 1 0 0 0
.......................................................GTTACTTAGCTGGGCAGCGG............................................................................ 20 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGA................................................................................. 20 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGGCATCGGC........................................................................... 26 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
............................................................................TCTGCTAACTGAGTCTTCGGCCAG................................................... 24 1 5 0.20 1 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................CGCGTCCCTCTCGCAGTACGGTT.. 23 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................CCCCGCGTCCCCCTCGCAGTACGGTT.. 26 0 5 0.20 1 0 0 0 0 0 0 1 0 0 0
.............................................................TAGCTGGGCAGCGGCTCTGC...................................................................... 20 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
............................................................................TCTGCTCACTGAGTC............................................................ 15 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
.......................................................GTTACTTAGCTGGGCAGCGGCTCTG....................................................................... 25 0 5 0.20 1 0 0 0 0 0 0 1 0 0 0
..............................................CTCCTTGTTGTTACTTAGCTGGGCAGCG............................................................................. 28 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TCAGCCCCCGCGTCCCCCTCGCAGT........ 25 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................CGCGTCCCCCTCGCAGTACGGT... 22 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..........................................................ACTTAGCTGGGCAGCGGCTCT........................................................................ 21 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGT.................................................................................. 19 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
.......................................................GTTACTTAGCTGGGCAGCGGC........................................................................... 21 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGGG.................................................................................. 19 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
..................................................................................CACTGAGTCTTCGGCCAG................................................... 18 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
............................................................................TCTACTCACTGAGTCTTCGGCCAG................................................... 24 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................CCCCCGCGTCCCCCTCGCAGTACGGTT.. 27 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
......................................................TGTTACTTTGCTGGGCAGCGGCTCTG....................................................................... 26 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGTGCAGC.............................................................................. 23 1 5 0.20 1 0 0 0 0 0 0 0 1 0 0
......................................................................AGCGGCTCTGCTCACTGAGTCTTCGGC...................................................... 27 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................TTGTTGTTACTTAGCTGA................................................................................... 18 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0
..................................................................................................................CGACTCAGCCCCCGCGTCCCCCTCGC........... 26 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..........................................................ACTTAGCTGGGCAGC.............................................................................. 15 0 6 0.17 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................TGAGTCTTCGGCCAGC.................................................. 16 1 6 0.17 1 0 0 0 1 0 0 0 0 0 0
..................................................................................CACTGAGTCTTCGGCAA.................................................... 17 1 6 0.17 1 0 0 0 1 0 0 0 0 0 0
...................................................................................................................GACTCAGCCCCCGCGTC................... 17 0 7 0.14 1 0 0 0 1 0 0 0 0 0 0
..................................................................................................................CGACTCAGCCCCCGCGT.................... 17 0 7 0.14 1 0 0 0 1 0 0 0 0 0 0
................................................................CTGGACAGCGGCTCTG....................................................................... 16 1 7 0.14 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................GCCCTCGCGTCCCCC............... 15 1 7 0.14 1 0 0 0 1 0 0 0 0 0 0
.............................................................TAGCTGGGCAGCGCC........................................................................... 15 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

CAAACCGTACTGCGAGGGGGACGCGGGGGCTGAGTCGCCGCTTTGAAGGCCCTGGCCGAAGACTCAGTGAGCAGAGCCGCTGCCCAGCTAAGTAACAACAAGGAGAAGGGCCTGTAGGGGGCGGGTTTCCATCAAGAGAAACAAATATACA
************************************..........(((((((.((((...(((((((((((((.....))))))).))))))..)))).......)))))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
Ovary		 SRR553486
Ovary		 SRR553485
Ovary		 M053
Female-body		 M025
embryo
 SRR553487
Ovary		 SRR553488
Ovary		 GSM343915
embryo
 O001
Testis
 M024
male body
................................................................................TGCCCAGCTAAGTAACAACAAGGAGA............................................. 26 0 5 11.60 58 0 20 31 1 0 4 2 0 0 0
..............................TGAGTCGCCGCTTTGAAGGCCCTGGC............................................................................................... 26 0 1 11.00 11 9 1 0 1 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGAGC.......................................................................... 25 0 5 10.40 52 36 3 4 1 4 1 1 2 0 0
...................................CGCCGCTTTGAAGGCCCTGGCCGAAGA......................................................................................... 27 0 1 8.00 8 1 6 0 0 0 0 0 1 0 0
.......................................................................................CTAAGTAACAACAAGGAGAAGGGC........................................ 24 0 5 4.40 22 22 0 0 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTG..................................... 23 0 5 3.80 19 14 2 1 1 0 0 1 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCT...................................... 22 0 5 3.60 18 10 1 1 0 3 1 2 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTGT.................................... 24 0 5 3.60 18 2 0 0 5 10 0 0 1 0 0
.............................................................................CGCTGCCCAGCTAAGTAACAACAAGGAGA............................................. 29 0 5 3.20 16 0 8 6 0 0 2 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGC........................................ 20 0 5 2.60 13 10 0 1 0 1 0 0 1 0 0
..........................................TTGAAGGCCCTGGCCGAAGACTCAG.................................................................................... 25 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTGTA................................... 25 0 3 2.00 6 5 1 0 0 0 0 0 0 0 0
................................................................................................AACAAGGAGAAGGGCCTGTAGGGGGC............................. 26 0 2 2.00 4 0 1 3 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCC....................................... 21 0 5 2.00 10 4 1 1 2 2 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTGTAGGG................................ 28 0 2 2.00 4 0 3 0 0 0 0 1 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTGTAGG................................. 27 0 3 1.67 5 0 4 0 1 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGAGCCGC....................................................................... 28 0 5 1.60 8 8 0 0 0 0 0 0 0 0 0
.......................................................................................CTAAGTAACAACAAGGAGAAGGG......................................... 23 0 5 1.40 7 7 0 0 0 0 0 0 0 0 0
...................................................CTGGCCGAAGACTCAGTGAGCAGAGC.......................................................................... 26 0 5 1.40 7 3 0 1 0 1 1 0 0 0 1
....................................................TGGCCGAAGACTCAGTGAGCAGA............................................................................ 23 0 5 1.20 6 3 0 1 0 2 0 0 0 0 0
..............................TGAGTCGCCGCTTTGAAGGCCCTGGCCGA............................................................................................ 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................GGCCCTGGCCGAAGACTCAGTGAGCAGAG........................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................CCCTGGCCGAAGACTCAGTGAGCAGA............................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................ACAACAAGGAGAAGGGCCTGTAGGGGGC............................. 28 0 2 1.00 2 0 2 0 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTGTAG.................................. 26 0 3 1.00 3 0 2 1 0 0 0 0 0 0 0
.............................................................................................AACAACAAGGAGAAGGGCCTGTAGGGGGC............................. 29 0 2 1.00 2 0 1 1 0 0 0 0 0 0 0
........................................................................................TAAGTAACAACAAGGAGAAGGGCC....................................... 24 0 5 1.00 5 0 0 0 0 0 0 0 0 5 0
.................................GTCGCCGCTTTGAAGGCCCTGGCCGAA........................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................GCCGCTTTGAAGGCCCTGGCCGAAGA......................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.........................GGGGCTGAGTCGCCGCTTTGAAGGCCC................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................AAGGGCCTGTAGGGGGC............................. 17 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGAG........................................................................... 24 0 5 1.00 5 3 1 1 0 0 0 0 0 0 0
..............................TGAGTCGCCGCTTTGAAGGCCCTG................................................................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTGTAGT................................. 27 1 3 1.00 3 0 2 1 0 0 0 0 0 0 0
..........................................TTGAAGGCCCTGGCCGAAGACTCAGTGA................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................TGAGTCGCCGCTTTGAAGGCCCT.................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................CCTGGCCGAAGACTCAGTGAGCAGA............................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................GCTGAGTCGCCGCTTTGAAGGCCC................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
........................GGGGGCTGAGTCGCCGCTTTGAAGGCCC................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...............................................................TCAGTGAGCAGAGCCGCTGCCCAGC............................................................... 25 0 5 1.00 5 2 0 0 3 0 0 0 0 0 0
............................................GAAGGCCCTGGCCGAAGACTCAGTGAGT............................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................TGAAGGCCCTGGCCGAAGACTCAGT................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................GAAGGCCCTGGCCGAAGACTCAGTGAGC............................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..........................................TTGAAGGCCCTGGCCGAAGA......................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................CTAAGTAACAACAAGGAGAAGGGCC....................................... 25 0 5 1.00 5 4 0 0 1 0 0 0 0 0 0
..................................................................................................................TAGGGGGCGGGTTTCCATCAAGAGA............ 25 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGAGCC......................................................................... 26 0 5 0.80 4 4 0 0 0 0 0 0 0 0 0
......................................................GCCGAAGACTCAGTGAGCAGAGCCGC....................................................................... 26 0 5 0.80 4 1 0 1 2 0 0 0 0 0 0
........................................................................................TAAGTAACAACAAGGAGAAGGGCCTGT.................................... 27 0 5 0.80 4 0 0 0 1 3 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTA..................................... 23 1 5 0.80 4 1 0 1 0 0 2 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGG.......................................... 18 0 5 0.80 4 1 1 1 0 0 1 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTGTAGC................................. 27 1 3 0.67 2 0 1 1 0 0 0 0 0 0 0
.......TACTGCGAGGGGGACGCGGGGGC......................................................................................................................... 23 0 5 0.60 3 2 0 0 1 0 0 0 0 0 0
....................................................TGGATGAAGACTCGGTGAGCAGAGC.......................................................................... 25 3 5 0.60 3 0 2 1 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCT....................................... 21 1 5 0.60 3 0 0 1 0 0 0 2 0 0 0
.....................................................GGCCGAAGACTCAGTGAGCAGAGCCGC....................................................................... 27 0 5 0.60 3 3 0 0 0 0 0 0 0 0 0
....................................................................................CAGCTAAGTAACAACAAGGAGA............................................. 22 0 5 0.60 3 0 2 1 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAG............................................................................. 22 0 5 0.60 3 1 0 1 1 0 0 0 0 0 0
...................................................................................................................AGGGGGCGGGTTTCCATCAAGAGA............ 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
...................GACGCGGGGGCTGAGTCGCCGCTT............................................................................................................ 24 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0
...................................................................................................AAGGAGAAGGGCCTGTAGGGGGCGGG.......................... 26 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................................AAGGGCCTGTAGGGGGCGGGTT........................ 22 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0
...................................................................................................AAGGAGAAGGGCCTGTAGGGGGCGGGT......................... 27 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................GTTACAACAAGGAGAAGGGCCTGTAGGG................................ 28 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0
.................................................................................................ACAAGGAGAAGGGCCTGTAGGGGGC............................. 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................AGGGCCTGTAGGGGGCGGGTTTCCATC.................. 27 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................AGGGCCTGTAGGGGGCGGGTT........................ 21 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0
........................GGGGGCTGAGTCGCCGCTTTGAAGG...................................................................................................... 25 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0
............................................................................................TAACAACAAGGAGAAGGGCCTGTAGGG................................ 27 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................AACAACAAGGAGAAGGGCCTGTAGGGGG.............................. 28 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................CTAACAACAAGGAGAAGGGCC....................................... 21 1 5 0.40 2 0 0 0 0 2 0 0 0 0 0
.....................................................................AGCAGAGCCGCTGCCCA................................................................. 17 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................CGAAGTAACAACAAGGAGAAGGGCC....................................... 25 1 5 0.40 2 2 0 0 0 0 0 0 0 0 0
......................................................................................GCTAAGTAACAACAAGGAGA............................................. 20 0 5 0.40 2 1 1 0 0 0 0 0 0 0 0
.....................................................................AGCAGAGCCGCTGCCCAGC............................................................... 19 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0
.....CGTACTGCGAGGGGGA.................................................................................................................................. 16 0 5 0.40 2 1 0 0 0 0 0 1 0 0 0
......................................................GCCGAAGACTCAGTGAGCAGAGC.......................................................................... 23 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0
........................................................CGAAGACTCAGTGAGCAGAGCCGCTGC.................................................................... 27 0 5 0.40 2 0 0 1 1 0 0 0 0 0 0
.......TACTGCGAGGGGGAC................................................................................................................................. 15 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0
........................................................CGAAGACTCAGTGAGCAGAGCCGCTGCC................................................................... 28 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0
......GTACTGCGAGGGGGA.................................................................................................................................. 15 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCA.............................................................................. 21 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGAA........................................................................... 24 1 5 0.40 2 1 0 1 0 0 0 0 0 0 0
.......TACTGCGAGGGGGACGCGGGG........................................................................................................................... 21 0 5 0.40 2 1 1 0 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGC............................................................................... 20 0 5 0.40 2 1 0 0 0 1 0 0 0 0 0
..AACCGTACTGCGAGGGGG................................................................................................................................... 18 0 5 0.40 2 1 0 0 0 0 1 0 0 0 0
...............................................................TCAGTGAGCAGAGCCGCTGCCCAGCTA............................................................. 27 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0
........................................................CGAAGACTCAGTGAGCAGAGCCGC....................................................................... 24 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0
............................................................................................TAACAACAAGGAGAAGGGCCTG..................................... 22 0 5 0.40 2 1 0 0 1 0 0 0 0 0 0
...............................................................TCAGTGAGCAGAGCCGCTGCCCAGCT.............................................................. 26 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................CTAAGTAACAACAAGGAGAAGGGT........................................ 24 1 5 0.40 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................AACAACAAGGAGAAGGGCCTGTATT................................. 25 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................GGCGGGTTTCCATCAAGA.............. 18 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
............................................................................................TAACAACAAGGAGAAGGGCCTGTAGG................................. 26 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTGAA................................... 25 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................GTTTCCATCAAGAGA............ 15 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTGTAGA................................. 27 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTGTAGGC................................ 28 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................AGGAGAAGGGCCTGTA................................... 16 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...................GACGCGGGGGCTGAGTCGCCGCT............................................................................................................. 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
............................GCTGAGTCGCCGCTTT........................................................................................................... 16 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..............................TGAGTCGCCGCTTTGAAGG...................................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
........................GGGGGCTGAGTCGCCGCTTTGAAGGC..................................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
...................GACGCGGGGGCTGAGTCGCCGC.............................................................................................................. 22 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..............................TGAGTCGCCGCTTTGAA........................................................................................................ 17 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
......................GCGGGGGCTGAGCCGCCGC.............................................................................................................. 19 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.....................CGCGGGGGCTGAGTCGCCGCTTT........................................................................................................... 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
........................GGGGGCTGAGTCGCCGCT............................................................................................................. 18 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
...................GACGCGGGGGCTGAGTCGCCGCTTT........................................................................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................GAGAAGGGCCTGTAG.................................. 15 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..........TGCGAGGGGGACGCGGGGGCTGAGT.................................................................................................................... 25 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
...................................................................................CCAGCTAAGTAACAACAAGGA............................................... 21 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGT........................................ 20 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0
........................................................................................TAAGTAACAACAAGGAGAAGGGCCTG..................................... 26 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
TAAACCGTACTGCGAGGGGGACGCGG............................................................................................................................. 26 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................AGCTAAGTAACAACAAGGAGAAGGGCC....................................... 27 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
................................................................................................AACAAGGAGAAGGGCCTG..................................... 18 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.........CTGCGAGGGGGACGCGGG............................................................................................................................ 18 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGAGCCG........................................................................ 27 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..................................................................................CCCAGCTAAGTAACAACAAGGAGAAGG.......................................... 27 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
......................................................GCCGAAGACTCAGTGAGCAGAGCCGCTGC.................................................................... 29 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGA................................................................................. 18 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
...................................................................TGAGCAGAGCCGCTGCCCAGCTAAGT.......................................................... 26 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
CAAACCGTACTGCGAGGGGGACGCGG............................................................................................................................. 26 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGT................................................................................... 16 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGA............................................. 15 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGAGCCGCT...................................................................... 29 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0
.................................................................................................ACAAGGAGAAGGGCCTGT.................................... 18 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
......................................................................................GCTAAGTAACAACAAGGAGAAGGGC........................................ 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
CAAACCGTACTGCGAGGGGGACGCGGGG........................................................................................................................... 28 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
........................................................CGAAGACTCAGTGAGCAGAGCCGCT...................................................................... 25 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGA.......................................... 18 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.....................................................................AGCAGAGCCGCTGCCCAGCTAA............................................................ 22 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTGA.................................... 24 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................AGTAACAACAAGGAGAAGGGC........................................ 21 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
........................................................CGAAGACTCAGTGAGCAGAGCCGCTG..................................................................... 26 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.AAACCGTACTGCGAGGGGGACGCG.............................................................................................................................. 24 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGAGA.......................................................................... 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
....................................................TCGCCGAAGACTCAGTGAGCAGAG........................................................................... 24 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCTC...................................... 22 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.......TACTGCGAGGGGGACGCGG............................................................................................................................. 19 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
......................................................................................GCTAAGTAACAACAAGGA............................................... 18 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................CTAAGTAACAACAAGGAGAAG........................................... 21 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTGC.................................... 24 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
....................................................................................CAGCTAAGTAACAACAAGGAGAAGGG......................................... 26 0 5 0.20 1 0 0 0 0 0 0 1 0 0 0
..........................................................AAGACTCAGTGAGCAGAGCC......................................................................... 20 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
................................................................................TGCCCAGCTAAGTAACAACAAGAAGA............................................. 26 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTG.................................................................................. 17 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
....................................................TGGCCGATGACTCAGGGAGCAGAGG.......................................................................... 25 3 5 0.20 1 0 0 0 0 0 0 0 1 0 0
..........TGCGAGGGGGACGCGGGGGCTGAG..................................................................................................................... 24 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
...............................................................TCAGTGAGCAGAGCCGCTGCCCAG................................................................ 24 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.................................................................AGTGAGCAGAGCCGCTGCCCAGCTAA............................................................ 26 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..........TGCGAGGGGGACGCGG............................................................................................................................. 16 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
............................................................GACTCAGTGAGCAGAGCCGCTG..................................................................... 22 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..................................................................GTGAGCAGAGCCGCTGCC................................................................... 18 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGAGCA......................................................................... 26 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.......TACTGCGAGGGGGACGCGGGAAA......................................................................................................................... 23 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.....................................................GGCCGAAGACTCAGTGAGCAGAGC.......................................................................... 24 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.............................................................................CGCTGCCCAGCTAAGTAACAACAAGGA............................................... 27 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................CTAAGTAACAACAAGGAGAAGGT......................................... 23 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..............................................................ATCAGTGAGCAGAGCCGCTGCCCAGC............................................................... 26 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTGTT................................... 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
........................................................CGAAGACTCAGTGAGCAGAGC.......................................................................... 21 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
....................................................TGGCCGAAAACTCAGTGAG................................................................................ 19 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
................................................................................TGCCCAGCTAAGTAACAACA................................................... 20 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................CAAAGTAACAACAAGGAGAAGGGC........................................ 24 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..............................................................CTCAGTGAGCAGAGCCGCTGCCCAGC............................................................... 26 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................CTAAGTAACAACAAGG................................................ 16 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
........................................................TGAAGACTCGGTGAGCAGAGCCGC....................................................................... 24 2 5 0.20 1 0 0 0 0 0 0 1 0 0 0
.......................................................................................CTAAGTAACAACAAGGAGAAGGGCCT...................................... 26 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGG......................................... 19 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGA........................................ 20 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTTC.................................... 24 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..AACCGTACTGCGAGGGGGACACGGG............................................................................................................................ 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................AAGGAGAAGGGCCTGT.................................... 16 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
CAAACCGTACTGCGAGGGGGACGCG.............................................................................................................................. 25 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................CTAAGTAACAACAAGGAGAAGGGCT....................................... 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.......TACTGCGAGGGGGACGCGGGGGCTG....................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
........................GAGGGCTGAGTAGCTGCTTTGA......................................................................................................... 22 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...................................................................TGAGCAGAGCCGCTGCCCAGCTAAG........................................................... 25 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0
...........................................................AGACTCAGTGAGCAGAGCCGCTG..................................................................... 23 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.......TACTGCGAGGGGGACGCGGT............................................................................................................................ 20 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...ACCGTACTGCGAGGGG.................................................................................................................................... 16 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
...................................................................................CCAGCTAAGTAACAACAAGGAGAAGGG......................................... 27 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
...........................................................AGACTCAGTGAGCAGAGCCGC....................................................................... 21 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
....................................................................................CCGCTAAGTAACAACAAGGAGAA............................................ 23 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.......................................................CCGAAGACTCAGTGAGC............................................................................... 17 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...........................................................AGACTCAGTGAGCAGAGCCGCTGC.................................................................... 24 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.........................................................GAAGACTCAGTGAGCAGAGCCGCTG..................................................................... 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.........................................................GAAGACTCGGTGAGCAGATCCGCTG..................................................................... 25 2 5 0.20 1 0 0 0 0 0 1 0 0 0 0
...........................................................................................GGAACAACAAGGAGAAGGGCC....................................... 21 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
....................................................TGGATGAAGACTCGGTGAGCAGAGCCGC....................................................................... 28 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0
............................................................................................TAACAACAAGGAGAAGGGC........................................ 19 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
........................................................................................TAAGTAACAACAAGGAGAAGGGCATGT.................................... 27 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
...............................................................TCAGTGAGCAGAGCCGCT...................................................................... 18 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
........................................................................................TAAGTAACAACAAGG................................................ 15 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGAGT.......................................................................... 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................CTAAGTAACAACAAGGAGAAGGGAAA...................................... 26 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................ACAAGGAGAAGGGCCTC..................................... 17 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................GCAACAACAAGGAGAAGGGCC....................................... 21 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.......TACTGCGAGGGGGACG................................................................................................................................ 16 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
....................................................TGGCCAAAGACTCAGTGAGCA.............................................................................. 21 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0
......................................................................................GCTAAGTAACAACAAGGAGAAGGGCC....................................... 26 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
....................................................TGGCCGAAGACTCAGTGAGCAGAGG.......................................................................... 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..............................................................CTCAGTGAGCAGAGCCGCTGCCCAG................................................................ 25 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
........................................................CGAAGACTCAGTGAGCAGAGCCGCTGCCC.................................................................. 29 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................GTAACAACAAGGAGAAGGGCCTGG.................................... 24 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
.....................................................GGCCGAAGACTCAGTGAGC............................................................................... 19 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
............................................................................................CAACAACAAGGAGAAGGGC........................................ 19 1 6 0.17 1 0 0 0 1 0 0 0 0 0 0
.....CGTACTGCGAGGGGG................................................................................................................................... 15 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................CAAGGAGAAGGGCCTG..................................... 16 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
............................................................GACTCAGTGAGCCGAGTC......................................................................... 18 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
..................GGACGCGGGGGCTGAGTC................................................................................................................... 18 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0
..........TGCGAGGGGGACGCGGAA........................................................................................................................... 18 2 7 0.14 1 0 1 0 0 0 0 0 0 0 0
..............AGGAGGACGCGGGGG.......................................................................................................................... 15 1 16 0.13 2 0 2 0 0 0 0 0 0 0 0
......................................CACTCTGAAGGCCCTGGC............................................................................................... 18 2 10 0.10 1 0 0 0 0 0 1 0 0 0 0
...........GCGAGGGGGGCCCGGG............................................................................................................................ 16 2 20 0.10 2 0 0 0 0 0 1 1 0 0 0
..............................................................CTCAGTAAGCAGTGTCGCT...................................................................... 19 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................CAACAAGGAGAAAGGC........................................ 16 1 14 0.07 1 1 0 0 0 0 0 0 0 0 0
..............AGGAGGACGCGGGGGTT........................................................................................................................ 17 2 19 0.05 1 0 1 0 0 0 0 0 0 0 0
.................................................CCCTGGACGAAGACTGAC.................................................................................... 18 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0
.....................................ACGCTGTGAGGGCCCTGG................................................................................................ 18 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0
....................ACGCGGGGGTTGAGA.................................................................................................................... 15 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0
....................TCGCGAGGGCTGAGTAGC................................................................................................................. 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 chr2h_Mrandom_015:118195-118345 - dsi_45 TGTA--TATTTGTTTCTCTTGATGGAAACCC-GCCCCCTACAGG-CCCTTCTCCTTGTT-----GTTACTTAGCTGGGCAGCGGCTCTGC---TCACTGAGTCTTCGGCCAGGGCCTTCAAAGCGGCGACTCAGCCCCCGCGTCCCCCTCGCAGTACGGTTTG
droSec2 scaffold_2056:1326-1475 + TAT----ATTTGTTTGCCTTAGTGGAAACCC-GCTCCCCGCAGG-CCCTTCGCCTTATT-----GTTACTTAGCTGGGCAGCGGCTCTGC---TCACCGAGTCTTCATCCAGTGCCTTCAAAGCGGCTATTCAGCCCCCGCGACCCCCTCGCCGTACTGTTTG
dm3 chr2L:3252410-3252560 + TGTA--TATTTGTTTGCCTTATTGGAGACCC-GCTCCCCGCAGG-CCCTTCACCTTATC-----GTTACTTAGCTGGACAGTGGCTCTGC---TCGTTGAGTCTTCGTCCAATGCCTTCAAAGCGGCGACTCAGCCCCCGCGACCCCCTTGCCGTACTGTTTG
droEre2 scaffold_4929:22034562-22034712 + TGTA--TATTTGTTTGCCTTATTGGAGACCC-GCTCCCCGCAGG-CCCTTCACCTTATC-----GTTACTTAGCTAGGCAGTGGCTCTGC---TCATTGAGTCTTCGTCCAATGCCTTCAAAGCGGCGACTCAGCCCCCGCGACCCCCTTGCCGTACTGTTTG
droYak3 v2_chrUn_960:34940-35090 + TGTA--TATTTGTTTGCCTTATTGGAGACCC-GCTCCCCGCAGG-CCCTTCACCTTATC-----GTTACTTAGCTAGGCAGTGGCTCTGC---TCGTTGAGTCTTCGTCCAATGCCTTCAAAGCGGCGACTCAGCCCCCGCGACCCCCTTGCCGTACTGTTTG
droEug1 scf7180000405779:9462-9608 - TATA--TTTTTTTTTGCCATAGCGGAGACCC-GGTCCCCGCGACCCCCTTCCCCTAGTC-----ATTGCTTGGCAAGGCAACAGCTCAGTTTTTCAACGAGCTCTCGTCCATTGTTATC-AAGCGGCAACTCAGCCCCCGCGGCTCCCTCGCCATA-------
droBia1 scf7180000301234:8653-8797 + T--------TGGTTTGCCATAGCGGAGGCTC-GTTACCCACCCA-CCCCTCACCTTGTC-----ACTGCCTGGCAAGGCAACGACTCAGG---TTGAACAGCC-CCATCCATCGTGGTCAAAGCGGCGACTCAGCCCCCGCGTCCCCCTTGACAAGCCAGCTG
droEle1 scf7180000489754:804-924 + T------CTTTGTTTATCGTAGCAGAGGCTT-GGTCCCCAC---------------------------------AAGGCGGCAGCTCAGT---TCGACGAGCTCACTTACATCGTTGCTAAGGCGGCGGCTCCGTCCCCGCATACCCCTTGCCATGCCAACTG
droRho1 scf7180000773245:4153-4304 - TATA--TTTTTGTTTGCCATAGCGGAGACCC-GGTCCCCGCGATCCCCTTCCCCTTGTTAAGCAATTGCTTGACAAGGCAAAAGCTCAGTTTTTCAACGAGCTTTCGTCCATCGTTA-CGAAGCGGCATATCAGCCCCCGCGTCCCCCTCGCCATA-------
droKik1 scf7180000299456:186-331 + TATA--TATTGGTTCGCCATAGCGGAGACCC-GGTCCCCGCGATCCCCTTTCCCTTGTC-----ATTGCTTGGCAAGGCAACAGCTCAGTTT-TTAACTAGCTCTCGTCCATCGTTGCC-AAGCGGCAACTCAGCCCCCGCGGCCCCCTCGCCATA-------
droAna3 scaffold_13014:4370-4521 + TTCACTTCTTTGTTTCTCATAGCGGAGGCTC-AGTCCCCGCATA-CCTTTGACCCTGTC-----GCTACTTGGCAGGGCACCGGCTCGAT---TTGACGAGCTCATTTA-CTTGTTGCTAGAGCGGCGGCTCCGACCCCGCACACCCCTTGCCATGCCAACTG
droBip1 scf7180000396700:6884-7018 - T--------TTGTTTGTCATAGCGGAGGCTCCGTT--------A-CCCCTCACCTTGTC-----TCTACTTGGCAAGGCAACAGCGCAGT---TCGACGAGCTCGCACACTTAA---CTGAAGCGGCGGCTCTGCCCCCGCGACCCCCTTACAAGACCAGTTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
TGTA--TATTTGTTTCTCTTGATGGAAACCC-GCCCCCTACAGG-CCCTTCTCCTTGTT-----GTTACTTAGCTGGGCAGCGGCTCTGC---TCACTGAGTCTTCGGCCAGGGCCTTCAAAGCGGCGACTCAGCCCCCGCGTCCCCCTCGCAGTACGGTTTGSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
.....................................................................................TCTGC---TCACTGAGTCTTCGGCCAGGG.................................................26178.007800080010382263
.....................................................................................TCTGC---TCACTGAGTCTTCGGCCAG...................................................24571.60358100103005653493498
......................................................TTGTT-----GTTACTTAGCTGGGCAGCGGC..............................................................................26565.40327300000127887706017
......................................................TTGTT-----GTTACTTAGCTGGGCAG..................................................................................22542.402120000000302993600
.....................................................................................TCTGC---TCACTGAGTCTTCGGCCAGG..................................................25130.003000050000100150
.....................................................................................TCTGC---TCACTGAGTCTTCGGCCAGGGC................................................27126.00260003000070160
.....................................................................................TCTGC---TCACTGAGTCTTCGGCCA....................................................23520.401020000000262123266
......................................................TTGTT-----GTTACTTAGCTGGGCAGC.................................................................................23518.60930000003101733219
.....................................................................................TCTGC---TCACTGAGTCTTCGGCCAGGGCC...............................................28118.0018000000301059
......................................................TTGTT-----GTTACTTAGCTGGGCAGCGG...............................................................................25512.006020000043851820
......................................................TTGTT-----GTTACTTAGCTGGGCA...................................................................................2158.40420000000972042
.......................................................TGTT-----GTTACTTAGCTGGGCAGCGGC..............................................................................2556.6033000000059559
...................................................TCCTTGTT-----GTTACTTAGCTGGGCAGCGGC..............................................................................2956.203100000012107110
......................TGGAAACCC-GCCCCCTACAGG-CCCTTC................................................................................................................2725.5011000000032330
......................................................TTGTT-----GTTACTTAGCTGGGC....................................................................................2055.0025200100089122
..........................................................T-----GTTACTTAGCTGGGCAGCGGCTCTG..........................................................................2654.80241001001211413
....................................................................................................................TTCAAAGCGGCGACTCAGCCCCCGCGTC...................2843.5014000000500018
.................................................................................................TGAGTCTTCGGCCAGGGCCTTCAAAGC.......................................2713.003000000000012
......................................................TTGTT-----GTTACTTAGCTGGGCAGCG................................................................................2453.0015000000400335
.........................................................................................................CGGCCAGGGCCTTCAAAGCGGCG...................................2313.003000000000003
..........................................................T-----GTTACTTAGCTGGGCAGCGG...............................................................................2152.2011000000001118
..........................................................T-----GTTACTTAGCTGGGCAGCGGCTC............................................................................2452.20110000001000010
..................................................................................................GAGTCTTCGGCCAGGG.................................................1612.002000000000002
..................................................................TACTTAGCTGGGCAGCGGCTCTGC---T.....................................................................2552.0010000000110008
.............................................................................................TCACTGAGTCTTCGGCCAGGGCCTTC............................................2612.002000000001001
..........................................................T-----GTTACTTAGCTGGGCAGCGGCTCTGC---......................................................................2751.608000000006002
......................................................TTGTT-----GTTACTTAGCTGG......................................................................................1851.608000000000521
..................TTGATGGAAACCC-GCCCCCTACAGG-CCC...................................................................................................................2821.503000000120000
..........................................................T-----GTTACTTAGCTGGGCAGCGGCTCT...........................................................................2551.407000000011131
.....................................................................................TCTGC---TCACTGAGTCTTCGGC......................................................2151.206000000030201
..........................................................T-----GTTACTTAGCTGGGCAGCGGC..............................................................................2251.206000000100005
.....................................................................................TCTGC---TCACTGAGTCTTCGGCC.....................................................2251.206000000013200
.............................................................................................TCACTGAGTCTTCGGCCAGGGCCTT.............................................2511.001000000000001
.......................................................................................................TTCGGCCAGGGCCTTCAAAGCGGCGAC.................................2711.001000000000001
.................................................................................................TGAGTCTTCGGCCAGGGC................................................1811.001000000000001
......................................................TTGTT-----GTTACTTAGCT........................................................................................1651.005000000000014
.....................................................................................TCTGC---TCACTGAGTCTTCGGCCAGGGCCT..............................................2911.001000000001000
.........................................................................................C---TCACTGAGTCTTCGGCCAGGGC................................................2311.001000000000010
.......................................................................................................TTCGGCCAGGGCCTTCAAAGCGGC....................................2411.001000100000000
.....................................................................................TCTGC---TCACTGAGTCTTCGGCCAGGGCCTT.............................................3011.001000000000010
........................................................................................GC---TCACTGAGTCTTCGGCCAGGGC................................................2411.001000000000001
..........................................................T-----GTTACTTAGCTGGGCAGCGGCT.............................................................................2351.005000200000003
.......................................................................................................TTCGGCCAGGGCCTTCAAAGCGGCGA..................................2611.001000000000010
.........................................................................................................CGGCCAGGGCCTTCAAAGCGGCGAC.................................2511.001000000000001
.....................................................................................................TCTTCGGCCAGGGCCTTCAAAGCGGCGAC.................................2911.001000000001000
.......................................................................................TGC---TCACTGAGTCTTCGGCCAGGGC................................................2511.001100000000000
......................TGGAAACCC-GCCCCCTACAGG-CCCTT.................................................................................................................2621.002000000101000
.......................................................................................TGC---TCACTGAGTCTTCGGCCAGGG.................................................2411.001000000000001
.........................................................................................................................AGCGGCGACTCAGCCCCCGCGTC...................2341.004000000000004
...............................................................................................ACTGAGTCTTCGGCCAGGGCC...............................................2111.001000000000001
..................................................CTCCTTGTT-----GTTACTTAGCTGGGCAGCGGC..............................................................................3051.005000000013100
........................................................................................................TCGGCCAGGGCCTTCAAAGCGGCGAC.................................2611.001000000000001
.......................................................................................TGC---TCACTGAGTCTTCGGCCAGGGCC...............................................2611.001000000000001
...................................................TCCTTGTT-----GTTACTTAGCTGG......................................................................................2151.005000005000000
.....................................................................................................TCTTCGGCCAGGGCCTTCAAAGCGGCG...................................2711.001000000001000
...................................................TCCTTGTT-----GTTACTTAGCTGGGCAGC.................................................................................2651.005000000110012
..........................................................................TGGGCAGCGGCTCTGC---TCACTGAGTCTT..........................................................2851.005000000011111
..................................................................................................................................TCAGCCCCCGCGTCCCCCTCGCAGTACGGT...3050.804000000031000
..........................................................................TGGGCAGCGGCTCTGC---TCACTGAGTC............................................................2650.804000000000004
..................................................................TACTTAGCTGGGCAGCGGCTCTG..........................................................................2350.804000000000004
...................................................................ACTTAGCTGGGCAGCGGC..............................................................................1850.804000000000004
.......................................................................................TGC---TCACTGAGTCTTCGGCCAG...................................................2250.804020000010010
..................................................................TACTTAGCTGGGCAGCGGCTCTGC---......................................................................2450.804000100003000
..................................................................................................................................TCAGCCCCCGCGTCCCCCTCGCAGTA.......2650.804000000100120
..........................................................................................................................................CGCGTCCCCCTCGCAGTACGGTT..2350.804000000030100
......................................TACAGG-CCCTTCTCCTTGTT-----GTTAC..............................................................................................2530.672000000001010
..........................................................................TGGGCAGCGGCTCTGC---TCACTGAGTCT...........................................................2750.603000000000012
.......................................................TGTT-----GTTACTTAGCTGGGCAGCGG...............................................................................2450.603000000001002
.......................................................................................TGC---TCACTGAGTCTTCGGCC.....................................................2050.603000300000000
.......................................................................................TGC---TCACTGAGTCTTCGGCCA....................................................2150.603000000010110
..........................................................T-----GTTACTTAGCTGGGCAGCGGCTCTGC---T.....................................................................2850.603000000001002
...................................................................ACTTAGCTGGGCAGCGG...............................................................................1750.603000000000003
..........................................................................TGGGCAGCGGCTCTGC---T.....................................................................1750.603000000000003
.....................................................CTTGTT-----GTTACTTAGCTGGGCAGCGGC..............................................................................2750.603000000012000
.......................................................TGTT-----GTTACTTAGCTGGGCAGC.................................................................................2250.603000000100011
..................................................................TACTTAGCTGGGCAGCGGC..............................................................................1950.603100000000200
...................................................TCCTTGTT-----GTTACTTAGCTGGGCAGCGG...............................................................................2850.603000000001101
....................GATGGAAACCC-GCCCCCTACAGG-C.....................................................................................................................2420.501100000000000
......................TGGAAACCC-GCCCCCTACAGG-CCCT..................................................................................................................2520.501000000000010
....................................................................................................................TTCAAAGCGGCGACTCAGCCCCCGC......................2540.502000000000002
....................................................................................................................TTCAAAGCGGCGACTCAGCCCCCGCG.....................2640.502000000000002
..........................AACCC-GCCCCCTACAGG-CCCTTCTCC.............................................................................................................2620.501000000001000
.........................................................................................................................AGCGGCGACTCAGCCCCCGCGTCC..................2440.502000000000002
...........................ACCC-GCCCCCTACAGG-CCCTTCTCC.............................................................................................................2520.501000000001000
............................CCC-GCCCCCTACAGG-CCCTTCTCC.............................................................................................................2420.501000000000001
..............................C-GCCCCCTACAGG-CCCTTCTCCTT...........................................................................................................2420.501000000000010
...................................................TCCTTGTT-----GTTACTTAGCTGGGCAG..................................................................................2550.402000000000110
.....................................................................TTAGCTGGGCAGCGGCTCTGC---TCACT.................................................................2650.402000000000002
.....................................................................TTAGCTGGGCAGCGGCTCTGC---TCAC..................................................................2550.402000000000002
................................................TTCTCCTTGTT-----GTTACTTAGCTGGGC....................................................................................2650.402000000000110
......................................................................TAGCTGGGCAGCGGCTCTGC---T.....................................................................2150.402000000000002
.......................................................................................TGC---TCACTGAGTCTTCGGC......................................................1950.402000000010100
..................................................................................GGCTCTGC---TCACTGAGTCTTCGGC......................................................2450.402000000101000
..................................................CTCCTTGTT-----GTTACTTAGCTGGGCAGCGG...............................................................................2950.402000000010010
..................................................................................................................................TCAGCCCCCGCGTCCCCCTCGCAGTACGG....2950.402000000002000
.........................................................TT-----GTTACTTAGCTGGGCAGCGG...............................................................................2250.402000000000002
TGTA--TATTTGTTTCTCTTGATGGAAACC.....................................................................................................................................2830.331000000000100
...A--TATTTGTTTCTCTTGA.............................................................................................................................................1730.331000000000001
TGTA--TATTTGTTTCTCTTGATGGAAAC......................................................................................................................................2730.331000000000100
........TTTGTTTCTCTTGATGGA.........................................................................................................................................1830.331000000001000
......................................TACAGG-CCCTTCTCCTTGTT-----GTTACT.............................................................................................2630.331000000000010
........TTTGTTTCTCTTGATG...........................................................................................................................................1640.251000000000001
....................................................................................................................TTCAAAGCGGCGACTCAGCCC..........................2140.251000000000001
....................................................................................................................TTCAAAGCGGCGACTCAGCCCCCGCGT....................2740.251000000000001
.........................................................................................................................AGCGGCGACTCAGCCCCCGCGT....................2240.251000000000001
.........................................................................................................................AGCGGCGACTCAGCCCCCGCGTCCC.................2540.251000000000010
...................................................................................................................CTTCAAAGCGGCGACTCAGCCCC.........................2340.251000000000001
.................................................................................................................GCCTTCAAAGCGGCGA..................................1640.251000000000001
.......................................................................................................................AAAGCGGCGACTCAGCCCCCGCGT....................2440.251000000000001
....................................................................................................................TTCAAAGCGGCGACTCAGC............................1940.251000000000001
.......................................................................................................................AAAGCGGCGACTCAGCCCCCGCGTC...................2540.251000000000001
.....................................................................................................................TCAAAGCGGCGACTCAGCCCCCGCGTCC..................2840.251000000000001
....................................................................................................................TTCAAAGCGGCGACTCAGCCCCCGCGTCC..................2940.251000000100000
....................................................................................................................TTCAAAGCGGCGACTCAGCCCC.........................2240.251000000100000
....................................................................................................................TTCAAAGCGGCGACTCAGCC...........................2040.251000000000100
.....................................................................................................................TCAAAGCGGCGACTCAGCCCC.........................2140.251000000000001
...........................................................................................................................CGGCGACTCAGCCCCCGCGTCC..................2240.251000000001000
......................................................................................CTGC---TCACTGAGTCTTCGGCC.....................................................2150.201000000001000
......................................................TTGTT-----GTTACTTAGCTGGGCAGCGGCT.............................................................................2750.201000000010000
...............................................................................AGCGGCTCTGC---TCACTGAGTCTTCG........................................................2550.201000000000001
.....................................................................TTAGCTGGGCAGCGGCTCTG..........................................................................2050.201000000000001
......................................................................TAGCTGGGCAGCGGCTC............................................................................1750.201000000000001
................................................................................................................................................CCCCTCGCAGTACGGT...1650.201000000000001
.......................................................TGTT-----GTTACTTAGCTGGGCAGCGGCTCT...........................................................................2850.201000000010000
..........................................................T-----GTTACTTAGCTGGGCA...................................................................................1750.201000000000001
.................................................TCTCCTTGTT-----GTTACTTAGCTGGGC....................................................................................2550.201000000000001
.......................................................TGTT-----GTTACTTAGCTGGGCAG..................................................................................2150.201000000000010
................................................................GTTACTTAGCTGGGCAGC.................................................................................1850.201000000000001
.......................................................................................................................................CCCCGCGTCCCCCTCGCAGTACGGT...2550.201000000000010
.................................................................................................TGAGTCTTCGGCCAG...................................................1550.201000000000001
.....................................................................TTAGCTGGGCAGCGG...............................................................................1550.201000000000001
..................................................................TACTTAGCTGGGCAGCGGCTCTGC---TC....................................................................2650.201000000000010
..........................................................................TGGGCAGCGGCTCTGC---......................................................................1650.201000000000001
.................................................................TTACTTAGCTGGGCAGCGGCTCTGC---T.....................................................................2650.201000000001000
........................................................................................GC---TCACTGAGTCTTCGGCCAG...................................................2150.201000000000001
.........................................AGG-CCCTTCTCCTTGT.........................................................................................................1650.201000000000001
...................................................................................GCTCTGC---TCACTGAGTCT...........................................................1850.201000000000001
........................................................GTT-----GTTACTTAGCTGGGCAGCGGCT.............................................................................2550.201000000000001
.........................................................TT-----GTTACTTAGCTGGGCAGCGGCT.............................................................................2450.201000000000001
...................................................TCCTTGTT-----GTTACTTAGCT........................................................................................1950.201000000000001
..........................................................................TGGGCAGCGGCTCTGC---TCA...................................................................1950.201000000000001
......................................................TTGTT-----GTTACTTAGCTGGGCAGCGGCTCTG..........................................................................3050.201000000010000
........................................................................................................................................CCCGCGTCCCCCTCGCAGTACGGT...2450.201000000010000
..................................................................TACTTAGCTGGGCAGCGGCTCTGC---TCA...................................................................2750.201000000000001
..........................................................T-----GTTACTTAGCTGGGCAG..................................................................................1850.201000000000001
..........................................................T-----GTTACTTAGCTGGGCAGCG................................................................................2050.201000000000001
.........................................................TT-----GTTACTTAGCTGGGCAGCGGCTC............................................................................2550.201000000000001
.............................................................................................TCACTGAGTCTTCGGCCA....................................................1850.201000000000001
...................................................................ACTTAGCTGGGCAGCGGCTC............................................................................2050.201000000000001
......................................................TTGTT-----GTTACTTAGCTG.......................................................................................1750.201000000000001
......................................................TTGTT-----GTTACTTAGCTGGGCAGCGGCTC............................................................................2850.201000000001000
..............................................................................................................................................TCCCCCTCGCAGTACGGT...1850.201000000100000
................................................................GTTACTTAGCTGGGCAGCGG...............................................................................2050.201000000000001
.......................................................................................................................................CCCCGCGTCCCCCTCGCAGTACGGTT..2650.201000000100000
......................................................................TAGCTGGGCAGCGGCTCTGC---......................................................................2050.201000000000001
.....................................................................................TCTGC---TCACTGAGTC............................................................1550.201000000000001
................................................................GTTACTTAGCTGGGCAGCGGCTCTG..........................................................................2550.201000000100000
..................................................CTCCTTGTT-----GTTACTTAGCTGGGCAGCG................................................................................2850.201000000000010
..................................................................................................................................TCAGCCCCCGCGTCCCCCTCGCAGT........2550.201000000000001
..........................................................................................................................................CGCGTCCCCCTCGCAGTACGGT...2250.201000000001000
...................................................................ACTTAGCTGGGCAGCGGCTCT...........................................................................2150.201000000000001
................................................................GTTACTTAGCTGGGCAGCGGC..............................................................................2150.201000000000001
......................................................TTGTT-----GTTACTTAGCTGGG.....................................................................................1950.201000000010000
..............................................................................................CACTGAGTCTTCGGCCAG...................................................1850.201000000000100
......................................................................................................................................CCCCCGCGTCCCCCTCGCAGTACGGTT..2750.201000000000100
...............................................................................AGCGGCTCTGC---TCACTGAGTCTTCGGC......................................................2750.201000000001000
..............................................................................................................................CGACTCAGCCCCCGCGTCCCCCTCGC...........2650.201000000000001
...................................................................ACTTAGCTGGGCAGC.................................................................................1560.171000000000001
...............................................................................................................................GACTCAGCCCCCGCGTC...................1770.141000000000001
..............................................................................................................................CGACTCAGCCCCCGCGT....................1770.141000000000001
droSec2
TAT----ATTTGTTTGCCTTAGTGGAAACCC-GCTCCCCGCAGG-CCCTTCGCCTTATT-----GTTACTTAGCTGGGCAGCGGCTCTGC---TCACCGAGTCTTCATCCAGTGCCTTCAAAGCGGCTATTCAGCCCCCGCGACCCCCTCGCCGTACTGTTTGSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
No Reads
droEre2
TGTA--TATTTGTTTGCCTTATTGGAGACCC-GCTCCCCGCAGG-CCCTTCACCTTATC-----GTTACTTAGCTAGGCAGTGGCTCTGC---TCATTGAGTCTTCGTCCAATGCCTTCAAAGCGGCGACTCAGCCCCCGCGACCCCCTTGCCGTACTGTTTGSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
..................................................................................................................................TCAGCCCCCGCGACCCCCTTGCCGTAC......2730.331000010
droYak3
TGTA--TATTTGTTTGCCTTATTGGAGACCC-GCTCCCCGCAGG-CCCTTCACCTTATC-----GTTACTTAGCTAGGCAGTGGCTCTGC---TCGTTGAGTCTTCGTCCAATGCCTTCAAAGCGGCGACTCAGCCCCCGCGACCCCCTTGCCGTACTGTTTGSizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
.........................................................TC-----GTTACTTAGCTAGGCAGTGGC..............................................................................2333.671100000110
.........................................................TC-----GTTACTTAGCTAGGCAGTGGCTC............................................................................2533.33100000082
.........................................................TC-----GTTACTTAGCTAGGCAGTGGCT.............................................................................2431.3340010012
....................................................................................................................TTCAAAGCGGCGACTCAGCCCCCGCGACC..................2931.0030000003
.....................................................................................TCTGC---TCGTTGAGTCTTCGTCCAATGCC...............................................2831.0030000030
.......................................................................................................TTCGTCCAATGCCTTCAAAGCGGC....................................2430.6720000011
.......................................................................................TGC---TCGTTGAGTCTTCGTCCAATGCCT..............................................2730.6720000011
.........................................................TC-----GTTACTTAGCTAGGCAGTGG...............................................................................2230.6720000011
........................................................................................GC---TCGTTGAGTCTTCGTCCAATGCC...............................................2530.6720000011
............................................................................................................................GGCGACTCAGCCCCCGCGACCCCCTTG............2730.6720000020
..................................................................................................................................TCAGCCCCCGCGACCCCCTTGCCGTAC......2730.6720000011
................CCTTATTGGAGACCC-GCTCCCCGC..........................................................................................................................2430.6720000020
.....................................................................................................................TCAAAGCGGCGACTCAGCCCCCGCGAC...................2730.6720000020
.........................................................TC-----GTTACTTAGCTAGGCAGTGGCTCT...........................................................................2630.3310000010
..................................TCCCCGCAGG-CCCTTCACCTTA..........................................................................................................2230.3310000010
.................................................................................................................................CTCAGCCCCCGCGACCCCCTTGCCG.........2530.3310000010
.....................................................................................TCTGC---TCGTTGAGTCTTCGTCCAATG.................................................2630.3310000001
.......................................................................................TGC---TCGTTGAGTCTTCGTCCAATGCC...............................................2630.3310000010
................................................................................................................TGCCTTCAAAGCGGCGACTCAGCCCC.........................2630.3310000010
..............................................................................................................AATGCCTTCAAAGCGGCGACTCAG.............................2430.3310000010
..........................................................C-----GTTACTTAGCTAGGCAGTGGCTC............................................................................2430.3310000010
.......................................................................................................................................CCCCGCGACCCCCTTGCCGTACTGTT..2630.3310000010
..................................................................................................................................TCAGCCCCCGCGACCCCCTTGCCG.........2430.3310000010
........TTTGTTTGCCTTATTGGAGACCC-GC.................................................................................................................................2530.3310000010
...................................................................................................................................CAGCCCCCGCGACCCCCTTGCCGTAC......2630.3310000010
........................................................................................................TCGTCCAATGCCTTCAAAGCGG.....................................2230.3310000010
.....................................................................................................TCTTCGTCCAATGCCTTCAAAGCGG.....................................2530.3310000010
.............................................................................................TCGTTGAGTCTTCGTCCAATGCCTTC............................................2630.3310000010
.........................................................................................................................AGCGGCGACTCAGCCCCCGCGACC..................2460.1710000001
...........................................................................................................................CGGCGACTCAGCCCCCGCGACCC.................2370.1410000010
droEug1
TATA--TTTTTTTTTGCCATAGCGGAGACCC-GGTCCCCGCGACCCCCTTCCCCTAGTC-----ATTGCTTGGCAAGGCAACAGCTCAGTTTTTCAACGAGCTCTCGTCCATTGTTATC-AAGCGGCAACTCAGCCCCCGCGGCTCCCTCGCCATA-------SizeHit CountTotal NormTotal
No Reads
droBia1
T--------TGGTTTGCCATAGCGGAGGCTC-GTTACCCACCCA-CCCCTCACCTTGTC-----ACTGCCTGGCAAGGCAACGACTCAGG---TTGAACAGCC-CCATCCATCGTGGTCAAAGCGGCGACTCAGCCCCCGCGTCCCCCTTGACAAGCCAGCTGSizeHit CountTotal NormTotal
No Reads
droEle1
T------CTTTGTTTATCGTAGCAGAGGCTT-GGTCCCCAC---------------------------------AAGGCGGCAGCTCAGT---TCGACGAGCTCACTTACATCGTTGCTAAGGCGGCGGCTCCGTCCCCGCATACCCCTTGCCATGCCAACTGSizeHit CountTotal NormTotal
No Reads
droRho1
TATA--TTTTTGTTTGCCATAGCGGAGACCC-GGTCCCCGCGATCCCCTTCCCCTTGTTAAGCAATTGCTTGACAAGGCAAAAGCTCAGTTTTTCAACGAGCTTTCGTCCATCGTTA-CGAAGCGGCATATCAGCCCCCGCGTCCCCCTCGCCATA-------SizeHit CountTotal NormTotal
No Reads
droKik1
TATA--TATTGGTTCGCCATAGCGGAGACCC-GGTCCCCGCGATCCCCTTTCCCTTGTC-----ATTGCTTGGCAAGGCAACAGCTCAGTTT-TTAACTAGCTCTCGTCCATCGTTGCC-AAGCGGCAACTCAGCCCCCGCGGCCCCCTCGCCATA-------SizeHit CountTotal NormTotal
No Reads
droAna3
TTCACTTCTTTGTTTCTCATAGCGGAGGCTC-AGTCCCCGCATA-CCTTTGACCCTGTC-----GCTACTTGGCAGGGCACCGGCTCGAT---TTGACGAGCTCATTTA-CTTGTTGCTAGAGCGGCGGCTCCGACCCCGCACACCCCTTGCCATGCCAACTGSizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
..................................................................................................................................TCCGACCCCGCACACCCCTTGCCATGCC.....28200.051000010
................................................................................................................TGTTGCTAGAGCGGCGGCTCCGA............................23200.051000010
.....................................................................TTGGCAGGGCACCGGCTCGAT---TTG...................................................................24200.051000010
.........TTGTTTCTCATAGCGGAGGCTC-AGTC...............................................................................................................................26200.051000010
.....................................................................................TCGAT---TTGACGAGCTCATTTA-CTTG.................................................25200.051000010
...................................................................................................................................CCGACCCCGCACACCCCTTGCCATGC......26200.051000010
droBip1
T--------TTGTTTGTCATAGCGGAGGCTCCGTT--------A-CCCCTCACCTTGTC-----TCTACTTGGCAAGGCAACAGCGCAGT---TCGACGAGCTCGCACACTTAA---CTGAAGCGGCGGCTCTGCCCCCGCGACCCCCTTACAAGACCAGTTGSizeHit CountTotal NormTotal
No Reads

Generated: 12/06/2013 at 02:29 PM