ID:

dsi_41

 Coordinate:

2L:21128217-21128301 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.7 -18.5 -18.4

Flybase annnotation

intergenic

Repeatable elements

NameClassFamily
Baggins1LINELOA

Sense Strand Reads

GACAACCCTGGGGAAAGTACACCCTATGAAACGACAAACAATAAAGTGGTACACAGACGGATCCGTCACCGACGAGGGAAGTGGGCTGGGGGGCCTTTGCCATATCCTCCTAAGTTAACGCTTTTGTCTGATTTTGTATCTAATAAAAGCGGGAGTTTTCTTTAATGTGATCATTTTTATAGATG
***********************************..........((((....((((.((.(((.(((((.((.......)).)).))).)))))))))))))...................*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Ovary		 SRR618934
Ovary		 SRR553485
Ovary		 M025
embryo
 SRR553487
Ovary		 SRR553488
Ovary		 M053
Female-body		 GSM343915
embryo
 M024
male body
 O001
Testis
 M023
head
..................................CAAACAATAAAGTGGTACACAGACGGA............................................................................................................................ 27 0 4 607.25 2429 1244 0 1043 0 102 40 0 0 0 0 0
..................................................ACACAGACGGATCCGTCACCGACG............................................................................................................... 24 0 1 236.00 236 0 23 0 209 0 0 1 0 2 0 1
..................................................ACACAGACGGATCCGTCACCGACGA.............................................................................................................. 25 0 1 75.00 75 0 69 0 5 0 0 1 0 0 0 0
..................................................ACACAGACGGATCCGTCACCGAC................................................................................................................ 23 0 1 52.00 52 0 44 0 7 0 0 1 0 0 0 0
..................................................ACACAGACGGATCCGTCACCGACGAG............................................................................................................. 26 0 1 47.00 47 0 38 0 7 0 0 0 2 0 0 0
.........................................TAAAGTGGTACACAGACGGATCCGTC...................................................................................................................... 26 0 1 28.00 28 0 28 0 0 0 0 0 0 0 0 0
..................................................ACACAGACGGATCCGTCACCGA................................................................................................................. 22 0 1 16.00 16 0 16 0 0 0 0 0 0 0 0 0
..................................CAAACAATAAAGTGGTACACAGACGG............................................................................................................................. 26 0 4 12.75 51 27 0 9 0 10 5 0 0 0 0 0
..................................................ACACAGACGGATCCGTCACCGACGAGG............................................................................................................ 27 0 1 12.00 12 0 10 0 0 0 0 2 0 0 0 0
...................................AAACAATAAAGTGGTACACAGACGGA............................................................................................................................ 26 0 4 11.00 44 18 1 22 0 3 0 0 0 0 0 0
..................................................ACACAGACGGATCCGTCACC................................................................................................................... 20 0 1 9.00 9 0 9 0 0 0 0 0 0 0 0 0
.................................................................................TGGGCTGGGGGGCCTTTGCCATATCC.............................................................................. 26 0 1 9.00 9 0 7 0 2 0 0 0 0 0 0 0
........................................................................................................TCCTCCTAAGTTAACGCTTTTGTCTGA...................................................... 27 0 2 8.50 17 5 0 1 0 5 6 0 0 0 0 0
................................................................................................................................TGATTTTGTATCTAATAAAAGCGGGA............................... 26 0 1 8.00 8 4 0 3 0 1 0 0 0 0 0 0
............................................................................................................................TGTCTGATTTTGTATCTAATAAAAGCGG................................. 28 0 1 8.00 8 2 0 2 0 2 2 0 0 0 0 0
..................................................ACACAGACGGATCCGTCACCG.................................................................................................................. 21 0 1 7.00 7 0 6 0 0 0 0 0 1 0 0 0
.............................................................TCCGTCACCGACGAGGGAAGTGGGC................................................................................................... 25 0 1 7.00 7 3 4 0 0 0 0 0 0 0 0 0
........TGGGGAAAGTACACCCTATGAAACGA....................................................................................................................................................... 26 0 1 5.00 5 1 4 0 0 0 0 0 0 0 0 0
...........................................................................................................TCCTAAGTTAACGCTTTTGTCTGATT.................................................... 26 0 2 4.00 8 1 1 2 1 0 2 1 0 0 0 0
...................................................................................................................TAACGCTTTTGTCTGATTTTGTATCTAA.......................................... 28 0 1 4.00 4 0 0 0 0 3 1 0 0 0 0 0
.................................ACAAACAATAAAGTGGTACACAGACGGA............................................................................................................................ 28 0 4 3.25 13 11 0 2 0 0 0 0 0 0 0 0
.................................................TACACAGACGGATCCGTCACCGACG............................................................................................................... 25 0 1 3.00 3 0 0 0 3 0 0 0 0 0 0 0
.........................................................................................................................TTTTGTCTGATTTTGTATCTAATAAA...................................... 26 0 1 3.00 3 0 0 0 0 0 2 1 0 0 0 0
.........................................TAAAGTGGTACACAGACGGATCCGTCAC.................................................................................................................... 28 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0
...............................................................................AGTGGGCTGGGGGGCCTTTGCCATA................................................................................. 25 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0
..................................................ACACAGACGGATCCGTCACCGACGAGGGA.......................................................................................................... 29 0 1 3.00 3 0 0 0 0 0 0 3 0 0 0 0
...............................................GGTACACAGACGGATCCGTCAC.................................................................................................................... 22 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0
...............................................GGTACACAGACGGATCCGTC...................................................................................................................... 20 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0
..................................................ACACAGACGGATCCGTCACCGACGAC............................................................................................................. 26 1 1 3.00 3 0 0 0 3 0 0 0 0 0 0 0
........TGGGGAAAGTACACCCTATGAAACGAC...................................................................................................................................................... 27 0 1 3.00 3 0 1 0 2 0 0 0 0 0 0 0
..................................................ACACAGACGGATCCGTCACCGACGAA............................................................................................................. 26 1 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0
......................................................................................................................................TGTATCTAATAAAAGCGGGAGTTTTCT........................ 27 0 1 3.00 3 0 0 2 0 1 0 0 0 0 0 0
...............................................................................................................................................TAAAAGCGGGAGTTTTCTTTAATGTGA............... 27 0 3 2.33 7 0 0 1 0 2 4 0 0 0 0 0
...........................................................................................................TCCTAAGTTAACGCTTTTGTCTGA...................................................... 24 0 2 2.00 4 2 0 0 0 2 0 0 0 0 0 0
...........................................AAGTGGTACACAGACGGATCCGTC...................................................................................................................... 24 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
..................................................ACACAGACGGATCCGTCATCGACG............................................................................................................... 24 1 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0
...............................................................................AGTGGGCTGGGGGGC........................................................................................... 15 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
.....................................................CAGACGGATCCGTCACCGACGAGGGA.......................................................................................................... 26 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
...............................................................................AGTGGGCTGGGGGGCCTTTGCCATAA................................................................................ 26 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
...................................................................................................................TAACGCTTTTGTCTGATTTTGTAT.............................................. 24 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0
........TGGGGAAAGTACACCCTATGAAACGACA..................................................................................................................................................... 28 0 1 2.00 2 0 1 0 0 0 0 1 0 0 0 0
...........................................................................................................TCCTAAGTTAACGCTTTTGTCTGATTT................................................... 27 0 2 2.00 4 1 0 0 1 1 1 0 0 0 0 0
..................................CAAACAATAAAGTGGTACACAGA................................................................................................................................ 23 0 4 2.00 8 2 0 1 0 1 4 0 0 0 0 0
...........................................................................................................................TTGTCTGATTTTGTATCTAATAAAAGC................................... 27 0 1 2.00 2 0 0 1 0 1 0 0 0 0 0 0
............................................................ATCCGTCACCGACGAGGGAAGTGGGC................................................................................................... 26 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
.............................................................TCCGTCACCGACGAGGGAAGTGTA.................................................................................................... 24 2 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0
..................................................ACACAGACGGATCCGTCACCGACGG.............................................................................................................. 25 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0
..................................................ACACAGACGGATCCGTCACCGACGT.............................................................................................................. 25 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
..................................................ACACAGACGGATCCGTC...................................................................................................................... 17 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
........................TATGAAACGACAAACAATAAAGTGGT....................................................................................................................................... 26 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
..................................CAAACAATAAAGTGGTACACAGACGGAT........................................................................................................................... 28 0 4 1.75 7 1 0 5 0 0 1 0 0 0 0 0
.....................................................................................................................................................................TGTGATCATTTTTATA.... 16 0 3 1.67 5 0 1 0 0 3 1 0 0 0 0 0
...................................................................................................CCATATCCTCCTAAGTTAACGCTTT............................................................. 25 0 2 1.50 3 0 0 0 0 3 0 0 0 0 0 0
.................................................................................................TGCCATATCCTCCTAAGTTAACGCT............................................................... 25 0 2 1.50 3 0 0 0 0 1 0 2 0 0 0 0
..................................CAAACAATAAAGTGGTACACAGACGGAA........................................................................................................................... 28 1 5 1.40 7 3 0 4 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TGTGATCATTTTTATAGAT. 19 0 3 1.33 4 0 1 0 0 0 0 0 0 0 3 0
.....................................................................................................................................................................TGTGATCATTTTTATAGA.. 18 0 3 1.33 4 0 0 0 0 1 0 0 0 0 3 0
..................................AAAACAATAAAGTGGTACACAGACGGA............................................................................................................................ 27 1 4 1.25 5 4 0 1 0 0 0 0 0 0 0 0
..................................CAAACAATAAAGTGGTACACAGACGGT............................................................................................................................ 27 1 4 1.25 5 3 0 1 0 1 0 0 0 0 0 0
........TGGGGAAAGTACACC.................................................................................................................................................................. 15 0 20 1.10 22 0 22 0 0 0 0 0 0 0 0 0
..................................................ACACAGACGGATCCGTCACCGACGAGGG........................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
..................................................GCACAGACGGATCCGTCACCGACGA.............................................................................................................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................................TGGTACACAGACGGATCCGTCGCCGACG............................................................................................................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................TAAGTTAACGCTTTTGTCTGATTT................................................... 24 0 2 1.00 2 0 0 0 1 1 0 0 0 0 0 0
.....................................................................................................................................................CGGGAGTTTTCTTTAATGTGA............... 21 0 4 1.00 4 0 0 1 0 3 0 0 0 0 0 0
..................................................ACACAGACGGGTCCGTCACCGACGA.............................................................................................................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................TTTGCCATATCCTCCTAAGTTAACGCT............................................................... 27 0 2 1.00 2 0 0 1 0 0 1 0 0 0 0 0
...............................................................................AGTGGGCTGGGGGGCCTTTGCCATAT................................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................TTTTGTATCTAATAAAAGCGGGAGTTTTC......................... 29 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..................................................AGACAGACGGATCCGTCACCGAC................................................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................................TGGTACACAGACGGATCCGTCACC................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................GACAAACAATAAAGTGGTACACAGACGGA............................................................................................................................ 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................ACACAGACGGATCCGTCACCGACCA.............................................................................................................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........................................AAGTGGTACACAGACGGATCCG........................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................GGGCTGGGGGGCCTTTGCCATA................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................ACACAGTCGGATCCGTCACCGACGAGG............................................................................................................ 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................CAAACAATAAATTGGTACACAGACGGA............................................................................................................................ 27 1 4 1.00 4 2 0 2 0 0 0 0 0 0 0 0
...............................................GGTACACAGACGGATCCGTCACC................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.................................................TACATAGACGGATCCGTCACCGACGA.............................................................................................................. 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................CCCTATGAAACGACAAACAATAAAGT.......................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................AACGCTTTTGTCTGATTTTGTATCTAA.......................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
....................................AACAATAAAGTGGTACACAGACGGA............................................................................................................................ 25 0 4 1.00 4 1 2 1 0 0 0 0 0 0 0 0
...................................................................................................................................TTTTGTATCTAATAAAAGC................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................TCACAGACGGATCCGTCACCGACG............................................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..................................................ACACAGACGGATCCGTCTCCTAC................................................................................................................ 23 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................GTATCTAATAAAAGCGGGAGTTTTC......................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................TTGTATCTAATAAAAGC................................... 17 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................CGTCACCGACGAGGGAAGTGGGC................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................TTTGTCTGATTTTGTATCTAATAAAAGCGG................................. 30 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..................................................ACACAGACGTATCCGTCACCGAC................................................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................GCACAGACGGGTCCGTCACCGACG............................................................................................................... 24 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...........................................AAGTGGTACACAGACGGATCTGTC...................................................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................TTTGTATCTAATAAAAGGGGGAGTTTTCT........................ 29 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................TTGTCTGATTTTGTATCTAATAAAA..................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................ACAGACAGATCCGTCACCGACGAGGGA.......................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................CAGACGGATCCGTCACCGACGAGGGAA......................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................GTGGGCTGGGGGGCCTTTGCCATATCC.............................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................ACACAGACGGATCCGTCACCGACGAGT............................................................................................................ 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................CACAGACGGATCCGTCACCGACGAGGGA.......................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
..............................................TGGTACACAGACGGATCCGTCACCGAC................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................ATCTAATAAAAGCGGGAGTTTTCT........................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................ACACAGACGGATCCGGCACCGACG............................................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................GCTTTTGTCTGATTTTGTATCTAA.......................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..................................................ACACAGACGGATCCGTCACCGACGAGC............................................................................................................ 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................TAAAGTGGTACACAGACGGATCCG........................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................GGATCCGTCACCGACGA.............................................................................................................. 17 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................TTTGTCTGATTTTGTATCTAATAAA...................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..................................................ACACAGACGGATCCGTCACCGACGAGA............................................................................................................ 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................TAAACAATAAAGTGGTACACAGACGGA............................................................................................................................ 27 1 6 1.00 6 3 0 3 0 0 0 0 0 0 0 0
...............................................................................AGTGGGCTGGGGGGCCT......................................................................................... 17 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................GTGGGCTGGGGGGCCTTTGCCATATC............................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
........................TGTGAAACGACAAACAATAAAGTGGT....................................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................TGTATCTAATAAAAGCGGGAGTTTTCTT....................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................TGATTTTGTATCTAATAAAAGCGGGAGT............................. 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..................................................ACACAGACGGATCCGTCA..................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................................TGGTACACAGACGGATCCGTCACCGA................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................................CAATAAAGTGGTACACAGACGGATCCGTC...................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................ACACAGACGGATCCGTCACCGACGAGGGCCA........................................................................................................ 31 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........TGGGGAAAGTACACCCTATGAAACGACAA.................................................................................................................................................... 29 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................TTGTCTGATTTTGTATCTAATAAAAGCGG................................. 29 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...........................................AAGTGGTACACAGACGGATCCGTCAC.................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................TCCGTCACCGACGAGGGA.......................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..................................................ACACAGACGGATCCGTAAACGACC............................................................................................................... 24 3 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
......................................................AGACGGATCCGTCACCGACGAGG............................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................TGGGCTGGGGGGCCTTTGCCAT.................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................TGAAACGACAAACAATAAAGTGGT....................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................ACACAGACGGATCCGTCGCCGACG............................................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................GTGGGCTGGGGGGCCTTTG...................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................AGTGGGCTGGGGGGCCTTTGCCATAC................................................................................ 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................AGTGGGCTGGGGGGCCTTTGCCAT.................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................................ATCCGTCACCGACGAG............................................................................................................. 16 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................ACACAGACGGATCCGTCACCGACTT.............................................................................................................. 25 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................TATCTAATAAAAGCGGGAGTTTTCT........................ 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..........................................AAAGTGGTACACAGACGGATCCGTC...................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................AAGGCTTTTGTCTGATTTTGTATCTAA.......................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TAACGCTTTTGTCTGATTTTGTA............................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................TAAGTGGTACACAGACGGATCCGTCATC................................................................................................................... 28 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................ACACAGTCGGATCCGTCACCGACGAG............................................................................................................. 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................ACACAGACGGATCCGTCGCCGACGA.............................................................................................................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................ACCGACGAGGGAAGTGGGCTGGGG.............................................................................................. 24 0 20 0.90 18 0 12 1 0 5 0 0 0 0 0 0
.................................................................TCACCGACGAGGGAAGTGGGCTGGGG.............................................................................................. 26 0 20 0.80 16 9 2 0 0 3 2 0 0 0 0 0
..................................CAAACAATAAAGGGGTACACAGACGGA............................................................................................................................ 27 1 4 0.75 3 1 0 2 0 0 0 0 0 0 0 0
..................................CAAACAATAAAGTGGTACACGGACGGA............................................................................................................................ 27 1 4 0.75 3 1 0 2 0 0 0 0 0 0 0 0
..................................GAAACAATAAAGTGGTACACAGACGGA............................................................................................................................ 27 1 4 0.75 3 1 0 2 0 0 0 0 0 0 0 0
..................................CAGACAATAAAGTGGTACACAGACGGA............................................................................................................................ 27 1 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0
..................................CAAACAATAAAGAGGTACACAGACGGA............................................................................................................................ 27 1 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0
........TGGGGAAAGTACACCCTA............................................................................................................................................................... 18 0 20 0.65 13 0 13 0 0 0 0 0 0 0 0 0
.....................................ACAATAAAGTGGTACACAGACGGA............................................................................................................................ 24 0 4 0.50 2 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................TCCTAAGTTAACGCGTTTGTCTGATTT................................................... 27 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................CCTAAGTTAACGCTTTTGTCTGA...................................................... 23 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................TCTAATAAAAGCGGGAGTTTTCTTT...................... 25 0 4 0.50 2 0 1 0 0 0 1 0 0 0 0 0
...........................................................................................................TCCTAAGTTAACGCTTT............................................................. 17 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
..................................CAAACAATAAAGTGGTACACAGGCGGA............................................................................................................................ 27 1 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TAACGCTTTTGTCTGA...................................................... 16 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................TCCTAAGTTAACGCT............................................................... 15 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
..................................CAAACAATAAAGTGGTACACAGACGA............................................................................................................................. 26 1 4 0.50 2 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................CCATATCCTCCTAAGTTAACGCTCT............................................................. 25 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
.........................................TAAAGTGGTACACAGACGG............................................................................................................................. 19 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0
..................................CCAACAATAAAGTGGTACACAGACGGA............................................................................................................................ 27 1 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TTTCTTTAATGTGATCATTTTTATAGA.. 27 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CGGGAGTTTTCTTTAATGTGATCATT.......... 26 0 4 0.50 2 0 0 0 0 2 0 0 0 0 0 0
............................................................................................................................................TAATAAAAGCGGGAGTTTTCTTTA..................... 24 0 4 0.50 2 0 0 1 0 1 0 0 0 0 0 0
..................................CAAACAATAAAGTGGCACACAGACGGA............................................................................................................................ 27 1 4 0.50 2 1 0 0 0 1 0 0 0 0 0 0
..................................CAAACAATAAAGTGGGACACAGACGGA............................................................................................................................ 27 1 4 0.50 2 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................CTCCTAAGTTAACGCTTTTGTCTGATT.................................................... 27 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.................TACACCCTATGAAACGAAAA.................................................................................................................................................... 20 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................TAAGTTAACGCTTTTGTCTGATAAA.................................................. 25 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................CCATATCCTCCTAAGTTAACGCT............................................................... 23 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
........TGGGGAAAGTACACCCTATGAAACGAAA..................................................................................................................................................... 28 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0
..................................CAAACAATAAAGCGGTACACAGACGGA............................................................................................................................ 27 1 4 0.50 2 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................GTTAACGCTTTTGTCTGA...................................................... 18 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................TTGCCATATCCTCCTAAGTTAACG................................................................. 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................ACCGACGAGGGAAGTGGGCTGGG............................................................................................... 23 0 20 0.45 9 0 3 1 0 4 1 0 0 0 0 0
...................................................................ACCGACGAGGGAAGTGGGCTGG................................................................................................ 22 0 20 0.45 9 0 8 0 0 1 0 0 0 0 0 0
.................................................................TCACCGACGAGGGAAGTGGGCTG................................................................................................. 23 0 20 0.40 8 1 6 0 0 1 0 0 0 0 0 0
.................................................................TCACCGACGAGGGAAGTGGGCTGGG............................................................................................... 25 0 20 0.35 7 7 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TCTAATAAAAGCGGGATTTTTCTTTAA.................... 27 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................TGTGATCATTTTTATAGATG 20 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TCTAATAAAAGCGGGAGTTTTCTTTAA.................... 27 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................AAAGCGGGAGTTTTCTTTAATGTGA............... 25 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
...................................................................ACCGACGAGGGAAGTGGGCTGGGGG............................................................................................. 25 0 20 0.30 6 3 3 0 0 0 0 0 0 0 0 0
...................................................................ACCGACGAGGGAAGTGGGCTG................................................................................................. 21 0 20 0.30 6 0 6 0 0 0 0 0 0 0 0 0
..................................CAAACAATAAAGTGGTACACAGACGTA............................................................................................................................ 27 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
..................................................................CACCGACGAGGGAAGTGGGCTGGGG.............................................................................................. 25 0 20 0.25 5 1 1 2 0 1 0 0 0 0 0 0
..................................CAAACAATAAAGTGGTACACAGACGGC............................................................................................................................ 27 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
.................................ACAAACAATAAAGTGGTACACAGACGG............................................................................................................................. 27 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
..................................CAAACAATGAAGTGGTACACAGACGGA............................................................................................................................ 27 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................AGCGAGAGTTTTCTTTTATGTGATCATTTT........ 30 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................GCGGGAGTTTTCTTTAATGTGATCATT.......... 27 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
....................................AACAATAAAGTGGTACACAGACGG............................................................................................................................. 24 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CGGGAGTTTTCTTTAATGTGATCATTTT........ 28 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
..................................CAAACAATAAAGTGGAACACAGACGGA............................................................................................................................ 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CGAGAGTTTTCTTTTATGTGATCATT.......... 26 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................TAATAAAAGCGGGAGTTTTCTTTAA.................... 25 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
..................................CAAACAATAAAGTGGTACACAGACGGATA.......................................................................................................................... 29 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
..................................CAAACAATAAAGTTGTACACAGACGGA............................................................................................................................ 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
...................................AAACAATAAAGTGGTACACAGACGGAT........................................................................................................................... 27 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
......................................CAATAAAGTGGTACACAGACGGA............................................................................................................................ 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TCTAATAAAAGCGGGAGTTTTCTT....................... 24 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0
..................................CAAACAATAAAGTAGTACACAGACGGA............................................................................................................................ 27 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
..................................................................CACCGACGAGGGAAGTGGGCTGGG............................................................................................... 24 0 20 0.25 5 0 3 0 0 1 1 0 0 0 0 0
..................................CAAACAATAAAGTCGTACACAGACGGA............................................................................................................................ 27 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................CTAATAAAAGCGGGAGTTTTCTT....................... 23 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
..................................CAAACAATAAAGTGGTACACAGACGAA............................................................................................................................ 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
..................................CAAACAATAAAGTGCTACACAGACGGA............................................................................................................................ 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
..................................CAAACAATAAAGTGGTACACAGACG.............................................................................................................................. 25 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................GAGAGTTTTCTTTTATGTGATCATTTTT....... 28 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0
..................................CAAACAATAAGGTGGTACACAGACGGA............................................................................................................................ 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
..................................CAAACAATAAAGTGGTACTCAGACGGA............................................................................................................................ 27 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0
..................................CAAACAATAAAGTGGTACACAGACCGA............................................................................................................................ 27 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
..................................CGAACAATAAAGTGGTACACAGACGGA............................................................................................................................ 27 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................AGCGAGAGTTTTCTTTTATGTGATCATT.......... 28 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0
....................................AACAATAGAGTGGTACACAGACGGA............................................................................................................................ 25 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................GGGAGTTTTCTTTAATGTGATCA............ 23 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
..................................CAAACAATAAAGTGGTACACAGACGGATC.......................................................................................................................... 29 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
..................................CAAACAACAAAGTGGTACACAGACGGA............................................................................................................................ 27 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
........................................ATAAAGTGGTACACAGACGGA............................................................................................................................ 21 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................AGCGGGAGTTTTCTTTAATGTGATCAT........... 27 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
...............................................GGTACACAGACGGATCC......................................................................................................................... 17 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................TCACCGACGAGGGAAGTGGGCTGG................................................................................................ 24 0 20 0.25 5 1 2 0 0 1 1 0 0 0 0 0
..................................CAAACAATAAAGTGGTACACATACGGA............................................................................................................................ 27 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
........TGGGGAAAGTACACCCT................................................................................................................................................................ 17 0 20 0.20 4 0 4 0 0 0 0 0 0 0 0 0
..................................CAAACAATAAAGTGGTACAAAGACGGA............................................................................................................................ 27 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
..................................CAAACAATAAAGTGGTACATAGACGGA............................................................................................................................ 27 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
...................................CAACAATAAAGTGGTACACAGACGGA............................................................................................................................ 26 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................TCACCGACGAGGGAAGTGGG.................................................................................................... 20 0 20 0.20 4 0 4 0 0 0 0 0 0 0 0 0
..................................................................................................................................................AAGCGGGAGTTTTCTTTAA.................... 19 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................TAAAAGCGGGAGTTTTCTTTAA.................... 22 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0
........TGGGGAAAGTACACCCTATGAAACGTTT..................................................................................................................................................... 28 3 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................TAAAAGCGGGAGTTTTCTT....................... 19 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0
...................................AAACAATAAAGTGGTACACAGACGGAC........................................................................................................................... 27 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TAATAAAAGCGGGAGTTTT.......................... 19 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................TAATAAAAGCGGGAGTTTTC......................... 20 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................ACCGACGAGGGAAGTGGG.................................................................................................... 18 0 20 0.15 3 0 3 0 0 0 0 0 0 0 0 0
...................................................................ACCGACGAGGGAAGTGGGC................................................................................................... 19 0 20 0.15 3 0 3 0 0 0 0 0 0 0 0 0
.................................................................TCACCGACGAGGGAAGTGGACTGGG............................................................................................... 25 1 20 0.15 3 2 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................ATAAAAGCGGGAGTT............................ 15 0 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................ACCGACGAGGGAAGTGGAA................................................................................................... 19 2 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0
.................................................................TCACCGACGAGGGAAGTGGGCTGGGGG............................................................................................. 27 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0
..................................................................CACCGACGAGGGAAGTGGGCTG................................................................................................. 22 0 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0
.....................................................................CGACGAGGGAAGTGGGCTGGGGG............................................................................................. 23 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................................ACTAAAAGCGGGAGTT............................ 16 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................ACCGACGAGGGAAGTGGGA................................................................................................... 19 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0
........TGGGGAAAGTACACCCTATGAAAC......................................................................................................................................................... 24 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0
......................................................................GACGAGGGAAGTGGGC................................................................................................... 16 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0
....ACCCTGGGGAAAGTACACCC................................................................................................................................................................. 20 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0
........TGGGGAAAGTACACCCTATG............................................................................................................................................................. 20 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TGAGATCATTTTGATAGA.. 18 2 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................GGGAGTTTTCTTTAAA................... 16 1 13 0.08 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................CCGACGAGGGAAGTGGGCTGGG............................................................................................... 22 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
.................................................TATACAGACGGATCCGTCACCGACGA.............................................................................................................. 26 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
..................................................................CACCGACGAGGGAAGTG...................................................................................................... 17 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................GACGAGGGAAGTGGGCTGGGGG............................................................................................. 22 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................ACCGACGAAGGAAGTGGGCTGGG............................................................................................... 23 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
....ACCCTGGGGAAAGTACACCCT................................................................................................................................................................ 21 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................ACCGACGAGGGAAGTG...................................................................................................... 16 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................CACCGACGAGGGAAGTGGGCTGG................................................................................................ 23 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
.................................ACAAACAATAAAGTGGT....................................................................................................................................... 17 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................ACCGACGAGGGAAGTGGGCT.................................................................................................. 20 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
....ACCCTGGGGAAAGTACACCCTATGAAAC......................................................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................ACCGACTAGGGAAGTGGGCTGGGGG............................................................................................. 25 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
........TGGGGAAAGTACACCCTAT.............................................................................................................................................................. 19 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
GACACCCCTGGGGAAAGTACACC.................................................................................................................................................................. 23 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................TCACCGACGAGGGAAGTGG..................................................................................................... 19 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
GACAACCCTGGGGAAAGTACA.................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
.......CTGGGGAAAGTACACCCTA............................................................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................TCACCGACGAGGGAAGTGGGA................................................................................................... 21 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
........TGGGGAAGGTACACCCT................................................................................................................................................................ 17 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................TCACCGACGACGGAAGTGGGCTGGG............................................................................................... 25 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
.....CCCTGGGGAAAGTACACCC................................................................................................................................................................. 19 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TGCTTTTGTCTGATCTTAT................................................ 19 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
........................................................................CGAGGGAAGTGGGCT.................................................................................................. 15 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................ACCGACGAGGGAAGT....................................................................................................... 15 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
..................................CAAACAATAAAGTGG........................................................................................................................................ 15 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
.......CTGGGGAAAGTACACCC................................................................................................................................................................. 17 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
...AACCCTGGGGAAAGTACACCCTATGA............................................................................................................................................................ 26 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
........TGGGGAAAGTACACCCAA............................................................................................................................................................... 18 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................CGACGAGGGAAGTGGGCTG................................................................................................. 19 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................GTTAACGCTTCTGACTGC...................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
........................................................................CGAGGGAAGTGAGCTGGGG.............................................................................................. 19 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
...AACCCTGGGGAAAGTACACCCT................................................................................................................................................................ 22 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0
......................................................................GACGAGCGTAGTGGGCTGGG............................................................................................... 20 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................ACCGACGAGGGAAGTGGGCTGGGGT............................................................................................. 25 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
........TAGGGAAAGTACACCC................................................................................................................................................................. 16 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CATCTATAAAAATGATCACATTAAAGAAAACTCCCGCTTTTATTAGATACAAAATCAGACAAAAGCGTTAACTTAGGAGGATATGGCAAAGGCCCCCCAGCCCACTTCCCTCGTCGGTGACGGATCCGTCTGTGTACCACTTTATTGTTTGTCGTTTCATAGGGTGTACTTTCCCCAGGGTTGTC
***************************************************************...................(((((((((((((.(((.((.((.......)).))))).))).)).))))....))))..........*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Ovary		 SRR553485
Ovary		 SRR618934
Ovary		 SRR553487
Ovary		 SRR553488
Ovary		 M023
head
 O001
Testis
 M053
Female-body		 O002
Head
 M025
embryo
.............................................................................................................................................TTATTGTTTGTCGTTTCATAGGGTG................... 25 0 1 58.00 58 28 25 0 3 2 0 0 0 0 0
.............................................................................................................................................TTATTGTTTGTCGTTTCATAGGGTGTA................. 27 0 1 23.00 23 10 12 0 0 1 0 0 0 0 0
.............................................................................................................................................TTATTGTTTGTCGTTTCATAGGGT.................... 24 0 1 18.00 18 5 5 0 4 4 0 0 0 0 0
.............................................................................................................................................TTATTGTTTGTCGTTTCATAGGG..................... 23 0 1 16.00 16 3 7 0 5 1 0 0 0 0 0
..........AATGATCACATTAAAGAAAACTCC....................................................................................................................................................... 24 0 4 14.50 58 1 1 54 0 0 0 0 2 0 0
.............................................................................................................................................TTATTGTTTGTCGTTTCATAGGGTGTACT............... 29 0 1 8.00 8 4 2 0 2 0 0 0 0 0 0
..........AATGATCACATTAAAGAAAACTCCC...................................................................................................................................................... 25 0 4 7.75 31 0 3 28 0 0 0 0 0 0 0
.............................................................................................................................................TTATTGTTTGTCGTTTCATAGGGTGT.................. 26 0 1 7.00 7 4 1 0 2 0 0 0 0 0 0
............................................................................................................................................TTTATTGTTTGTCGTTTCATAGGGTG................... 26 0 1 7.00 7 4 3 0 0 0 0 0 0 0 0
.............................................................................................................................................TTATTGTTTGTCGTTTCATAGGGTGTAC................ 28 0 1 7.00 7 2 1 0 4 0 0 0 0 0 0
............................................................................................................................................TTTATTGTTTGTCGTTTCATAGGG..................... 24 0 1 6.00 6 2 4 0 0 0 0 0 0 0 0
..............................................................................................................................................TATTGTTTGTCGTTTCATAGGGTG................... 24 0 1 6.00 6 5 1 0 0 0 0 0 0 0 0
..........AATGATCACATTAAAGAAAACTCCCGC.................................................................................................................................................... 27 0 4 4.75 19 1 4 13 0 0 0 0 1 0 0
.............................................................................................................................................TTATTGTTTGTCGTTTCATAGG...................... 22 0 1 4.00 4 0 2 0 2 0 0 0 0 0 0
....................................................................TAACTTAGGAGGATATGGCAAAGGC............................................................................................ 25 0 1 4.00 4 2 0 0 2 0 0 0 0 0 0
...........................................................CAAAAGCGTTAACTTAGGAGGATATGGC.................................................................................................. 28 0 2 3.50 7 1 2 0 2 2 0 0 0 0 0
..............................................................................................................................................TATTGTTTGTCGTTTCATAGGGTGTA................. 26 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0
............................................................................................................................................TTTATTGTTTGTCGTTTCATAGGGTGTA................. 28 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0
...................................................................................................GCCCACTTCCCTCGTCGGTGACGGA............................................................. 25 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0
..........AATGATCACATTAAAGAAAACTC........................................................................................................................................................ 23 0 4 2.75 11 0 0 11 0 0 0 0 0 0 0
......................................................TCAGACAAAAGCGTTAACTTAGGAGGA........................................................................................................ 27 0 2 2.50 5 1 0 0 2 2 0 0 0 0 0
............................................................................................................................................................TCATAGGGTGTACTTTCCC.......... 19 0 20 2.15 43 0 0 0 0 0 0 43 0 0 0
.....................................................................AACTTAGGAGGATATGGCAAAGGC............................................................................................ 24 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0
....................................................................................................CCCACTTCCCTCGTCGGTGACG............................................................... 22 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0
..........AATGATCACATTAAAGAAAACT......................................................................................................................................................... 22 0 4 2.00 8 0 0 8 0 0 0 0 0 0 0
.................................................................................................CAGCCCACTTCCCTCGTCGGTGACGGA............................................................. 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
..............................................................................................................................................TATTGTTTGTCGTTTCATAGGGTGTACT............... 28 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0
..............................................................................................................................................TATTGTTTGTCGTTTCATAGGGTGT.................. 25 0 1 2.00 2 0 0 0 1 1 0 0 0 0 0
................................................................................................CCAGCCCACTTCCCTCGTCGGTGACGGA............................................................. 28 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
..............................................................................................................................................TATTGTTTGTCGTTTCATAGGGT.................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...............................................TACAAAATCAGACAAAAGCGTTAACT................................................................................................................ 26 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0
........................................TATTAGATACAAAATCAGACAAAAGCGTT.................................................................................................................... 29 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
......................................................TCAGACAAAAGCGTTAACTTAGA............................................................................................................ 23 1 2 1.50 3 0 3 0 0 0 0 0 0 0 0
........................................................AGACAAAAGCGTTAACTTAGGAGGA........................................................................................................ 25 0 2 1.50 3 1 1 0 0 1 0 0 0 0 0
........................................................AGACAAAAGCGTTAACTTAGGAGGATA...................................................................................................... 27 0 2 1.50 3 2 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................TTCATAGGGTGTACTTTCCCCAGGGT.... 26 0 20 1.25 25 0 1 23 1 0 0 0 0 0 0
.............................................................................................................................................TTATTGTTTGTCGTTTCATAGGGTGTC................. 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................CACTTCCCTCGTCGGTGACGGATCCGTC....................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................TAGATACAAAATCAGACAAAAGCGTT.................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................TTTATTGTTTGTCGTTTCATAGGGT.................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................TCAGACAAAAGCGTTAACTTAGGAGGATA...................................................................................................... 29 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TATTGTTTGTCGTTTCATAGGGTGTAC................ 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................GATCCGTCTGTGTACCACTTT.......................................... 21 0 4 1.00 4 0 0 0 0 0 0 0 0 4 0
............................................................................GAGGATATGGCAAAGGCCCC......................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................AGCCCACTTCCCTCGTCGGTGACGGATC........................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................TTTATTGTTTGTCGTTTCATAGG...................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.......................................TTATTAGATAAAAAATCA................................................................................................................................ 18 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................TTGTTTGTCGTTTCATGGGGC.................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TTATTGTTTGTCGTTTCATAGGGTGTT................. 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................TTGATTGTTTGTCGTTTCATAGGG..................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................AGCCCACTTCCCTCGTCGGTGACGGA............................................................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................GTATTGTTTGTCGTTTCATAGGGTG................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................TTAACTTAGGAGGATATGGCAAAGGCC........................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................TATTTTGTCGTTTCATAGGGTG................... 22 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................TGTCGTTTCATAGGG..................... 15 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.....................................TTTTATTAGATACAAAATCAGACAAA.......................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................TTATTGTTTGTCGTTTCATAG....................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGTCGTTTCATAGGGTGTACT............... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................ATATTGTTTGTCGTTTCATAGGGTG................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........AATGATCACATTAAAGAAAACTCCCG..................................................................................................................................................... 26 0 4 1.00 4 0 0 3 0 0 0 0 1 0 0
.........................................................................................................TTCCCTCGTCGGTGACGGATCCGTC....................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................AGCGTTAACTTAGGAGGATATGGC.................................................................................................. 24 0 2 1.00 2 0 0 1 0 1 0 0 0 0 0
..........AATGATCACATTAAAGAA............................................................................................................................................................. 18 0 4 0.75 3 0 0 3 0 0 0 0 0 0 0
..........AATGATCACATAAAAGAAAACTCT....................................................................................................................................................... 24 2 4 0.75 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................................CCGTCTGTGTACCACTTTATTGTT.................................... 24 0 4 0.75 3 0 0 3 0 0 0 0 0 0 0
..........AATGATCACATTAAAGA.............................................................................................................................................................. 17 0 4 0.75 3 0 0 3 0 0 0 0 0 0 0
........................................................AGACAAAAGCGTTAAC................................................................................................................. 16 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................TTTGCCGTTTCATAGGGTGTACTTTC............ 26 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0
............................................................AAAAGCGTTAACTTAG............................................................................................................. 16 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0
......................................................TCAGACAAAAGCGTTAACTTAGG............................................................................................................ 23 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................TTCCCTTGTCGGTGACGGATCCGTC....................................................... 25 1 2 0.50 1 0 0 0 0 0 0 0 0 0 1
...................................................AAATCAGACAAAAGCGTTAACTTAGGA........................................................................................................... 27 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0
...................................................................TTAACTTAGGAGGATATGGCAAAG.............................................................................................. 24 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0
..............................................................AAGCGTTAACTTAGGAGGATATGGC.................................................................................................. 25 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0
....................................................................TAACTTAGGAGGATATGGCAAAGG............................................................................................. 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
..........AATGATCACATTAAAGAAAA........................................................................................................................................................... 20 0 4 0.50 2 0 0 2 0 0 0 0 0 0 0
....................................................................TAACTTAGGAGGATATGGCAA................................................................................................ 21 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0
..........AATGATCACATAAAAGAAAACTCTCGC.................................................................................................................................................... 27 2 4 0.50 2 2 0 0 0 0 0 0 0 0 0
......................................................TCAGACAAAAGCGTTAACTTAGGA........................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
....................................................AATCAGACAAAAGCGTTAACTTAGGA........................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.................................................................CGTTAACTTAGGAGGATATGGCAAA............................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.....................................................................AACTTAGGAGGATATG.................................................................................................... 16 0 4 0.50 2 0 0 2 0 0 0 0 0 0 0
.................................................CAAAATCAGACAAAAGCGT..................................................................................................................... 19 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.....................................................................AACTTAGGAGGATATGGC.................................................................................................. 18 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.....................TAAAGAAAACTCCCGCTTTTATTAGA.......................................................................................................................................... 26 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
...................................................AAATCAGACAAAAGCGT..................................................................................................................... 17 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
..........AATGATCACATTAAAGACAACTCCC...................................................................................................................................................... 25 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0
..........AGTGATCACATTAAAGAAAACTCC....................................................................................................................................................... 24 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0
..........AATGATCACGTTAAAGAAAACTCC....................................................................................................................................................... 24 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0
................CACATTAAAGAAAACTCCCG..................................................................................................................................................... 20 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0
..........AATGATCACATTAAAGAAAATTCCC...................................................................................................................................................... 25 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0
..........AATGATCACATTGAAGAAAACTCCTT..................................................................................................................................................... 26 3 4 0.25 1 0 0 0 1 0 0 0 0 0 0
..........AATGATCACATTAAAGAAAACTCCCGCT................................................................................................................................................... 28 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
......................AAAGAAAACTCCCGCTTTTATTAGA.......................................................................................................................................... 25 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0
............TGATCACATTAAAGAAAACTCCCGCT................................................................................................................................................... 26 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0
............................................................................................................................TCCGTCTGTGTACCACTTTATTGTTA................................... 26 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0
.............GATCACATTAAAGAAAACTCC....................................................................................................................................................... 21 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0
..........AATGATCACATTAAAGAAA............................................................................................................................................................ 19 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................GTACCACTTTATTGTTTG.................................. 18 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0
..........GCTGATCACATTAAAGAAAACTCC....................................................................................................................................................... 24 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0
...........ATGATCACATTAAAGAAAACTCC....................................................................................................................................................... 23 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................CCGTCTGTGTACCACTTTATTGTTTGT................................. 27 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0
..........AATGATCACATTAAAGAAAACAC........................................................................................................................................................ 23 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................................TTCCCTTGTCGGTGACAGATCCGTC....................................................... 25 2 4 0.25 1 0 0 0 0 0 0 0 0 0 1
...........ATGATCACATTAAAGAAAACTCCC...................................................................................................................................................... 24 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0
..........AATGATCACATCAAAGAAAACTCCCGT.................................................................................................................................................... 27 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0
..........AATGGTCACATTAAAGAAAACTCC....................................................................................................................................................... 24 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................TCCGTCTGTGTACCACTTTATTGT..................................... 24 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0
..........AATGATCACATAAAAGAAAACTCTCT..................................................................................................................................................... 26 3 5 0.20 1 0 0 0 0 1 0 0 0 0 0
............................................................................GAGGATATGGCAAAGG............................................................................................. 16 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................CCCAGCCCACTTCCCTCGTCGGTGA................................................................. 25 0 20 0.20 4 0 4 0 0 0 0 0 0 0 0
..........AATGATCACATTAACGAAAACTCCCGC.................................................................................................................................................... 27 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................GTTTCATAGGGTGTAC................ 16 0 20 0.15 3 0 0 3 0 0 0 0 0 0 0
..............................................................................................CCCCAGCCCACTTCCCTCGTCGGTGA................................................................. 26 0 20 0.15 3 0 3 0 0 0 0 0 0 0 0
.............................................................................................................................CCGTCTGTGTACCACTTTATTGCCT................................... 25 2 7 0.14 1 0 0 1 0 0 0 0 0 0 0
......................AATGAAAACTCCCGCTTT................................................................................................................................................. 18 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TAGGGTGTACTTTCCCCAGGGTTGTC 26 0 20 0.10 2 0 0 0 0 2 0 0 0 0 0
..........................................................................AGGAGGCTATGGGAAAGG............................................................................................. 18 2 10 0.10 1 0 0 0 0 0 0 0 1 0 0
..........................................................................................................................................................TTTCATAGGGTGTACTTTCCCCAGGGT.... 27 0 20 0.10 2 0 1 0 0 1 0 0 0 0 0
................................................................................................................................TCTGTGATCGACTTTATTGT..................................... 20 3 12 0.08 1 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................TTAGTCGTTGCATCGGGTG................... 19 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0
................................................ACAAAATCAGACAGAA......................................................................................................................... 16 1 15 0.07 1 1 0 0 0 0 0 0 0 0 0
.......................................TTATTAGATAAAAAATCAA............................................................................................................................... 19 2 19 0.05 1 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................TAGGGTGTACTTTCCCCAA....... 19 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................TCATAGGGTGTACTTTCCCCAGGGTT... 26 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0
....................................................................................................CCCACTTCCCTCGTCGG.................................................................... 17 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................GGGTGTACTTTCCCCAGGGTTGTC 24 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0
....................................................................................................CCCACTTCCCTCGTCGGTG.................................................................. 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................................................TTCATAGGGTGTACTTTCCCCAGGGC.... 26 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................CCATTTCCCTCGTCGGTG.................................................................. 18 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1
...............................................................................................................................................................TAGGGTGTACTTTCCCCAAGGTTGTC 26 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................ATAGGGTGTACTTTCCCCAGGGTTGTC 27 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................GTACTTTCCCCAGGGTTGTC 20 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................TAGGGTGTACTTTCCCCAGGGTTGT. 25 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................TAGGGTGTACTTTCCCCAGGGTAGT. 25 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................TAGGGTGTACTTTCCC.......... 16 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0
..................................CGCATTTATTAGATA........................................................................................................................................ 15 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 2L:21128167-21128351 + dsi_41 GACAACCCTGGGGAAAGTACACCCTATGAAACGACAAACA-ATAAAGTGGTACACAGACGGATCCGTCACCGACGAGGGAAGTGGGCTGGGGG--GCCTTTGCCATA--TCCTCCTAAGTTAACGCTTTTGTCTGATTTTGTATCTAATAAAAGCGGGAGTTTTCTTTAATGTGATCATTTTTATAGATG
droSec2 scaffold_99:73318-73418 - TACAACCCTGGGGAAAGTACACCCTATGAAACCACAAACAAATAAAGTGGTATACAGACGGATCC-TCACCGACGAGGGAAGTGGGCTGGGGG--TTGTTG--------GCC------------------------------------------------------------------------------
dm3 chr2RHet:2240936-2241046 - GAAAACCCTGGGGAAAGTACACCCTATGAAACCACAAACA-ATAAAGTGGTATACAGACGGATCCCTCACCGACGAGGGAAGTGGGATGGGCAAGGACATTGCTATACTGTC------------------------------------------------------------------------------
droTak1 scf7180000413637:60-151 + GACAACATTGTCTGAAGAGCACCCTATGGTTAAACACACC-ATAGCATGGTACACAGATGGATCCCTGACACAACAAGGCACGGGCCTTGGAG-------------------------------------------------------------------------------------------------
droEle1 scf7180000489454:3064-3161 - GACCACATTGTCTGAAGTGCACCCTATGGCTAAACACACC-ATAGCATGGTACACAGATGGATCCCTGACACAACAAGGCACGGGCCTTGGAT-----------ATA--TCC------------------------------------------------------------------------------
droFic1 scf7180000453230:18162-18253 - GACCACCATGAAGGAAGTACACTCCATGGCAAGTCACACC-ATACCGTGGTATACAGACGGTTCCCTTACACACCAAGGCACTGGCCTTGGAG-------------------------------------------------------------------------------------------------
droGri2 scaffold_8236:3446-3549 + GACAACTCTGGATGAAGTCCATCCCATGAAACCGCACACC-ATAAAATGGTACACCGATGGATCACCCACGAATCAGGGCACCGGCCTTGGAG--TGCTGG-----GTCCTC------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
GACAACCCTGGGGAAAGTACACCCTATGAAACGACAAACA-ATAAAGTGGTACACAGACGGATCCGTCACCGACGAGGGAAGTGGGCTGGGGG--GCCTTTGCCATA--TCCTCCTAAGTTAACGCTTTTGTCTGATTTTGTATCTAATAAAAGCGGGAGTTTTCTTTAATGTGATCATTTTTATAGATGSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
..................................CAAACA-ATAAAGTGGTACACAGACGGA................................................................................................................................274607.252429000000010431244102400
...................................................ACACAGACGGATCCGTCACCGACG...................................................................................................................241236.00236012209001000023
...................................................ACACAGACGGATCCGTCACCGACGA..................................................................................................................25175.00750005001000069
...................................................ACACAGACGGATCCGTCACCGAC....................................................................................................................23152.00520007001000044
...................................................ACACAGACGGATCCGTCACCGACGAG.................................................................................................................26147.00472007000000038
..........................................TAAAGTGGTACACAGACGGATCCGTC..........................................................................................................................26128.00280000000000028
...................................................ACACAGACGGATCCGTCACCGA.....................................................................................................................22116.00160000000000016
..................................CAAACA-ATAAAGTGGTACACAGACGG.................................................................................................................................26412.755100000009271050
...................................................ACACAGACGGATCCGTCACCGACGAGG................................................................................................................27112.00120000002000010
...................................AAACA-ATAAAGTGGTACACAGACGGA................................................................................................................................26411.004400000002218301
...................................................ACACAGACGGATCCGTCACC.......................................................................................................................2019.009000000000009
..................................................................................TGGGCTGGGGG--GCCTTTGCCATA--TCC..............................................................................2619.009000200000007
.............................................................................................................TCCTCCTAAGTTAACGCTTTTGTCTGA......................................................2728.5017000000015560
.....................................................................................................................................TGATTTTGTATCTAATAAAAGCGGGA...............................2618.008000000034100
.................................................................................................................................TGTCTGATTTTGTATCTAATAAAAGCGG.................................2818.008000000022220
...................................................ACACAGACGGATCCGTCACCG......................................................................................................................2117.007100000000006
..............................................................TCCGTCACCGACGAGGGAAGTGGGC.......................................................................................................2517.007000000003004
........TGGGGAAAGTACACCCTATGAAACGA............................................................................................................................................................2615.005000000001004
................................................................................................................TCCTAAGTTAACGCTTTTGTCTGATT....................................................2624.008000100121021
........................................................................................................................TAACGCTTTTGTCTGATTTTGTATCTAA..........................................2814.004000000000310
.................................ACAAACA-ATAAAGTGGTACACAGACGGA................................................................................................................................2843.25130000000211000
..................................................TACACAGACGGATCCGTCACCGACG...................................................................................................................2513.003000300000000
..............................................................................................................................TTTTGTCTGATTTTGTATCTAATAAA......................................2613.003000000100020
..........................................TAAAGTGGTACACAGACGGATCCGTCAC........................................................................................................................2813.003000000000003
................................................................................AGTGGGCTGGGGG--GCCTTTGCCATA--.................................................................................2513.003000000000003
...................................................ACACAGACGGATCCGTCACCGACGAGGGA..............................................................................................................2913.003000000300000
................................................GGTACACAGACGGATCCGTCAC........................................................................................................................2213.003000000000003
................................................GGTACACAGACGGATCCGTC..........................................................................................................................2013.003000000000003
........TGGGGAAAGTACACCCTATGAAACGAC...........................................................................................................................................................2713.003000200000001
...........................................................................................................................................TGTATCTAATAAAAGCGGGAGTTTTCT........................2713.003000000020100
....................................................................................................................................................TAAAAGCGGGAGTTTTCTTTAATGTGA...............2732.337000000010240
................................................................................................................TCCTAAGTTAACGCTTTTGTCTGA......................................................2422.004000000002200
............................................AAGTGGTACACAGACGGATCCGTC..........................................................................................................................2412.002000000000002
................................................................................AGTGGGCTGGGGG--GC.............................................................................................1512.002000000000002
......................................................CAGACGGATCCGTCACCGACGAGGGA..............................................................................................................2612.002000000000002
........................................................................................................................TAACGCTTTTGTCTGATTTTGTAT..............................................2412.002000000000020
........TGGGGAAAGTACACCCTATGAAACGACA..........................................................................................................................................................2812.002000000100001
................................................................................................................TCCTAAGTTAACGCTTTTGTCTGATTT...................................................2722.004000100001110
..................................CAAACA-ATAAAGTGGTACACAGA....................................................................................................................................2342.008000000012140
................................................................................................................................TTGTCTGATTTTGTATCTAATAAAAGC...................................2712.002000000010100
.............................................................ATCCGTCACCGACGAGGGAAGTGGGC.......................................................................................................2612.002000000000002
...................................................ACACAGACGGATCCGTC..........................................................................................................................1712.002000000000002
........................TATGAAACGACAAACA-ATAAAGTGGT...........................................................................................................................................2612.002000000000002
..................................CAAACA-ATAAAGTGGTACACAGACGGAT...............................................................................................................................2841.757000000051010
..........................................................................................................................................................................TGTGATCATTTTTATA....1631.675000000000311
......................................................................................................CCATA--TCCTCCTAAGTTAACGCTTT.............................................................2521.503000000000300
....................................................................................................TGCCATA--TCCTCCTAAGTTAACGCT...............................................................2521.503000000200100
..........................................................................................................................................................................TGTGATCATTTTTATAGAT.1931.334000030000001
..........................................................................................................................................................................TGTGATCATTTTTATAGA..1831.334000030000100
........TGGGGAAAGTACACC.......................................................................................................................................................................15201.10220000000000022
...................................................ACACAGACGGATCCGTCACCGACGAGGG...............................................................................................................2811.001000000100000
...................................................................................................................TAAGTTAACGCTTTTGTCTGATTT...................................................2421.002000100000100
..........................................................................................................................................................CGGGAGTTTTCTTTAATGTGA...............2141.004000000010300
..................................................................................................TTTGCCATA--TCCTCCTAAGTTAACGCT...............................................................2721.002000000010010
................................................................................AGTGGGCTGGGGG--GCCTTTGCCATA--T................................................................................2611.001000000100000
........................................................................................................................................TTTTGTATCTAATAAAAGCGGGAGTTTTC.........................2911.001000000000100
...............................................TGGTACACAGACGGATCCGTCACC.......................................................................................................................2411.001000000000001
................................GACAAACA-ATAAAGTGGTACACAGACGGA................................................................................................................................2911.001000000001000
............................................AAGTGGTACACAGACGGATCCG............................................................................................................................2211.001000000000001
...................................................................................GGGCTGGGGG--GCCTTTGCCATA--.................................................................................2211.001000000000001
................................................GGTACACAGACGGATCCGTCACC.......................................................................................................................2311.001000000000001
.....................CCCTATGAAACGACAAACA-ATAAAGT..............................................................................................................................................2611.001000000010000
.........................................................................................................................AACGCTTTTGTCTGATTTTGTATCTAA..........................................2711.001000000000010
....................................AACA-ATAAAGTGGTACACAGACGGA................................................................................................................................2541.004000000011002
........................................................................................................................................TTTTGTATCTAATAAAAGC...................................1911.001000000000001
............................................................................................................................................GTATCTAATAAAAGCGGGAGTTTTC.........................2511.001000000000100
..........................................................................................................................................TTGTATCTAATAAAAGC...................................1711.001000000000001
................................................................CGTCACCGACGAGGGAAGTGGGC.......................................................................................................2311.001000000000001
...............................................................................................................................TTTGTCTGATTTTGTATCTAATAAAAGCGG.................................3011.001000000000100
................................................................................................................................TTGTCTGATTTTGTATCTAATAAAA.....................................2511.001000000001000
......................................................CAGACGGATCCGTCACCGACGAGGGAA.............................................................................................................2711.001000000000001
.................................................................................GTGGGCTGGGGG--GCCTTTGCCATA--TCC..............................................................................2711.001000000000001
....................................................CACAGACGGATCCGTCACCGACGAGGGA..............................................................................................................2811.001000000100000
...............................................TGGTACACAGACGGATCCGTCACCGAC....................................................................................................................2711.001000000000001
..............................................................................................................................................ATCTAATAAAAGCGGGAGTTTTCT........................2411.001000000001000
............................................................................................................................GCTTTTGTCTGATTTTGTATCTAA..........................................2411.001000000010000
..........................................TAAAGTGGTACACAGACGGATCCG............................................................................................................................2411.001000000000001
...........................................................GGATCCGTCACCGACGA..................................................................................................................1711.001000000000001
...............................................................................................................................TTTGTCTGATTTTGTATCTAATAAA......................................2511.001000000000100
................................................................................AGTGGGCTGGGGG--GCCT...........................................................................................1711.001000000000001
.................................................................................GTGGGCTGGGGG--GCCTTTGCCATA--TC...............................................................................2611.001000000100000
...........................................................................................................................................TGTATCTAATAAAAGCGGGAGTTTTCTT.......................2811.001000000000100
.....................................................................................................................................TGATTTTGTATCTAATAAAAGCGGGAGT.............................2811.001000000000100
...................................................ACACAGACGGATCCGTCA.........................................................................................................................1811.001000000000001
...............................................TGGTACACAGACGGATCCGTCACCGA.....................................................................................................................2611.001000000000001
......................................CA-ATAAAGTGGTACACAGACGGATCCGTC..........................................................................................................................2911.001000000000001
........TGGGGAAAGTACACCCTATGAAACGACAA.........................................................................................................................................................2911.001000000100000
................................................................................................................................TTGTCTGATTTTGTATCTAATAAAAGCGG.................................2911.001000000000100
............................................AAGTGGTACACAGACGGATCCGTCAC........................................................................................................................2611.001000000000001
..............................................................TCCGTCACCGACGAGGGA..............................................................................................................1811.001000000010000
.......................................................AGACGGATCCGTCACCGACGAGG................................................................................................................2311.001000000001000
..................................................................................TGGGCTGGGGG--GCCTTTGCCAT....................................................................................2211.001000000000001
..........................TGAAACGACAAACA-ATAAAGTGGT...........................................................................................................................................2411.001000000000001
.................................................................................GTGGGCTGGGGG--GCCTTTG........................................................................................1911.001000000000001
................................................................................AGTGGGCTGGGGG--GCCTTTGCCAT....................................................................................2411.001000000000001
.............................................................ATCCGTCACCGACGAG.................................................................................................................1611.001000000000001
.............................................................................................................................................TATCTAATAAAAGCGGGAGTTTTCT........................2511.001000000000100
...........................................AAAGTGGTACACAGACGGATCCGTC..........................................................................................................................2511.001000000000001
........................................................................................................................TAACGCTTTTGTCTGATTTTGTA...............................................2311.001000000010000
....................................................................ACCGACGAGGGAAGTGGGCTGGGG..................................................................................................24200.90180000000105012
..................................................................TCACCGACGAGGGAAGTGGGCTGGGG..................................................................................................26200.8016000000009322
........TGGGGAAAGTACACCCTA....................................................................................................................................................................18200.65130000000000013
.....................................ACA-ATAAAGTGGTACACAGACGGA................................................................................................................................2440.502000000011000
.................................................................................................................CCTAAGTTAACGCTTTTGTCTGA......................................................2320.501000000000100
...............................................................................................................................................TCTAATAAAAGCGGGAGTTTTCTTT......................2540.502000000000011
................................................................................................................TCCTAAGTTAACGCTTT.............................................................1720.501000000000001
........................................................................................................................TAACGCTTTTGTCTGA......................................................1620.501000000000001
................................................................................................................TCCTAAGTTAACGCT...............................................................1520.501000000000001
..........................................TAAAGTGGTACACAGACGG.................................................................................................................................1940.502000000000002
.................................................................................................................................................................TTTCTTTAATGTGATCATTTTTATAGA..2720.501000000001000
..........................................................................................................................................................CGGGAGTTTTCTTTAATGTGATCATT..........2640.502000000000200
.................................................................................................................................................TAATAAAAGCGGGAGTTTTCTTTA.....................2440.502000000010100
...............................................................................................................CTCCTAAGTTAACGCTTTTGTCTGATT....................................................2720.501000000001000
......................................................................................................CCATA--TCCTCCTAAGTTAACGCT...............................................................2320.501000000000100
......................................................................................................................GTTAACGCTTTTGTCTGA......................................................1820.501000000000001
...................................................................................................TTGCCATA--TCCTCCTAAGTTAACG.................................................................2420.501000000001000
....................................................................ACCGACGAGGGAAGTGGGCTGGG...................................................................................................23200.459000000010413
....................................................................ACCGACGAGGGAAGTGGGCTGG....................................................................................................22200.459000000000108
..................................................................TCACCGACGAGGGAAGTGGGCTG.....................................................................................................23200.408000000001106
..................................................................TCACCGACGAGGGAAGTGGGCTGGG...................................................................................................25200.357000000007000
..........................................................................................................................................................................TGTGATCATTTTTATAGATG2030.331000000000001
...............................................................................................................................................TCTAATAAAAGCGGGAGTTTTCTTTAA....................2730.331000000010000
......................................................................................................................................................AAAGCGGGAGTTTTCTTTAATGTGA...............2530.331000000000100
....................................................................ACCGACGAGGGAAGTGGGCTGGGGG--...............................................................................................25200.306000000003003
....................................................................ACCGACGAGGGAAGTGGGCTG.....................................................................................................21200.306000000000006
...................................................................CACCGACGAGGGAAGTGGGCTGGGG..................................................................................................25200.255000000021101
.................................ACAAACA-ATAAAGTGGTACACAGACGG.................................................................................................................................2740.251000000001000
.........................................................................................................................................................GCGGGAGTTTTCTTTAATGTGATCATT..........2740.251000000000100
....................................AACA-ATAAAGTGGTACACAGACGG.................................................................................................................................2440.251000000000001
..........................................................................................................................................................CGGGAGTTTTCTTTAATGTGATCATTTT........2840.251000000000100
.................................................................................................................................................TAATAAAAGCGGGAGTTTTCTTTAA....................2540.251000000000001
...................................AAACA-ATAAAGTGGTACACAGACGGAT...............................................................................................................................2740.251000000000100
......................................CA-ATAAAGTGGTACACAGACGGA................................................................................................................................2340.251000000001000
...............................................................................................................................................TCTAATAAAAGCGGGAGTTTTCTT.......................2440.251000000100000
...................................................................CACCGACGAGGGAAGTGGGCTGGG...................................................................................................24200.255000000000113
................................................................................................................................................CTAATAAAAGCGGGAGTTTTCTT.......................2340.251000000010000
..................................CAAACA-ATAAAGTGGTACACAGACG..................................................................................................................................2540.251000000010000
...........................................................................................................................................................GGGAGTTTTCTTTAATGTGATCA............2340.251000000000001
..................................CAAACA-ATAAAGTGGTACACAGACGGATC..............................................................................................................................2940.251000000001000
.........................................ATAAAGTGGTACACAGACGGA................................................................................................................................2140.251000000001000
........................................................................................................................................................AGCGGGAGTTTTCTTTAATGTGATCAT...........2740.251000000000100
................................................GGTACACAGACGGATCC.............................................................................................................................1740.251000000000001
..................................................................TCACCGACGAGGGAAGTGGGCTGG....................................................................................................24200.255000000001112
........TGGGGAAAGTACACCCT.....................................................................................................................................................................17200.204000000000004
..................................................................TCACCGACGAGGGAAGTGGG........................................................................................................20200.204000000000004
.......................................................................................................................................................AAGCGGGAGTTTTCTTTAA....................1950.201000000000001
....................................................................................................................................................TAAAAGCGGGAGTTTTCTTTAA....................2250.201000000000001
....................................................................................................................................................TAAAAGCGGGAGTTTTCTT.......................1960.171000000000001
.................................................................................................................................................TAATAAAAGCGGGAGTTTT..........................1960.171000000000001
.................................................................................................................................................TAATAAAAGCGGGAGTTTTC.........................2060.171000000000001
....................................................................ACCGACGAGGGAAGTGGG........................................................................................................18200.153000000000003
....................................................................ACCGACGAGGGAAGTGGGC.......................................................................................................19200.153000000000003
...................................................................................................................................................ATAAAAGCGGGAGTT............................1580.131000000000001
..................................................................TCACCGACGAGGGAAGTGGGCTGGGGG--...............................................................................................27200.102000000002000
...................................................................CACCGACGAGGGAAGTGGGCTG.....................................................................................................22200.102000000000200
......................................................................CGACGAGGGAAGTGGGCTGGGGG--...............................................................................................23200.102000000000002
........TGGGGAAAGTACACCCTATGAAAC..............................................................................................................................................................24200.102000000000002
.......................................................................GACGAGGGAAGTGGGC.......................................................................................................16200.102000000000002
....ACCCTGGGGAAAGTACACCC......................................................................................................................................................................20200.102000000000002
........TGGGGAAAGTACACCCTATG..................................................................................................................................................................20200.102000000000002
.....................................................................CCGACGAGGGAAGTGGGCTGGG...................................................................................................22200.051000000000001
...................................................................CACCGACGAGGGAAGTG..........................................................................................................17200.051000000000001
.......................................................................GACGAGGGAAGTGGGCTGGGGG--...............................................................................................22200.051000000000001
....ACCCTGGGGAAAGTACACCCT.....................................................................................................................................................................21200.051000000000001
....................................................................ACCGACGAGGGAAGTG..........................................................................................................16200.051000000000001
...................................................................CACCGACGAGGGAAGTGGGCTGG....................................................................................................23200.051000000000001
.................................ACAAACA-ATAAAGTGGT...........................................................................................................................................17200.051000000000001
....................................................................ACCGACGAGGGAAGTGGGCT......................................................................................................20200.051000000000001
....ACCCTGGGGAAAGTACACCCTATGAAAC..............................................................................................................................................................28200.051000000000001
........TGGGGAAAGTACACCCTAT...................................................................................................................................................................19200.051000000000001
..................................................................TCACCGACGAGGGAAGTGG.........................................................................................................19200.051000000000100
GACAACCCTGGGGAAAGTACA.........................................................................................................................................................................21200.051000000100000
.......CTGGGGAAAGTACACCCTA....................................................................................................................................................................19200.051000000000001
.....CCCTGGGGAAAGTACACCC......................................................................................................................................................................19200.051000000000001
.........................................................................CGAGGGAAGTGGGCT......................................................................................................15200.051000000000001
....................................................................ACCGACGAGGGAAGT...........................................................................................................15200.051000000000001
..................................CAAACA-ATAAAGTGG............................................................................................................................................15200.051000000010000
.......CTGGGGAAAGTACACCC......................................................................................................................................................................17200.051000000000001
...AACCCTGGGGAAAGTACACCCTATGA.................................................................................................................................................................26200.051000000010000
......................................................................CGACGAGGGAAGTGGGCTG.....................................................................................................19200.051000000000001
...AACCCTGGGGAAAGTACACCCT.....................................................................................................................................................................22200.051100000000000
droSec2
TACAACCCTGGGGAAAGTACACCCTATGAAACCACAAACAAATAAAGTGGTATACAGACGGATCC-TCACCGACGAGGGAAGTGGGCTGGGGG--TTGTTG--------GCC------------------------------------------------------------------------------SizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
..............................................................TCC-TCACCGACGAGGGAAGTGGGCTG.....................................................................................................2611.0010001
....................................................................ACCGACGAGGGAAGTGGGCTGGGG..................................................................................................24200.0510001
...................................................................CACCGACGAGGGAAGTGGGCT......................................................................................................21200.0510001
................................................................C-TCACCGACGAGGGAAGTGGGCTGG....................................................................................................25200.0510001
droTak1
GACAACATTGTCTGAAGAGCACCCTATGGTTAAACACACC-ATAGCATGGTACACAGATGGATCCCTGACACAACAAGGCACGGGCCTTGGAG-------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GACCACATTGTCTGAAGTGCACCCTATGGCTAAACACACC-ATAGCATGGTACACAGATGGATCCCTGACACAACAAGGCACGGGCCTTGGAT-----------ATA--TCC------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GACCACCATGAAGGAAGTACACTCCATGGCAAGTCACACC-ATACCGTGGTATACAGACGGTTCCCTTACACACCAAGGCACTGGCCTTGGAG-------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droGri2
GACAACTCTGGATGAAGTCCATCCCATGAAACCGCACACC-ATAAAATGGTACACCGATGGATCACCCACGAATCAGGGCACCGGCCTTGGAG--TGCTGG-----GTCCTC------------------------------------------------------------------------------SizeHit CountTotal NormTotalV109
Male-body		M041
Female-body
No Reads

Generated: 12/06/2013 at 02:29 PM