ID:

dsi_27

 Coordinate:

chr2h_Mrandom_058:52965-53017 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.8 -17.8 -17.7

Flybase annnotation

intron [Dsim\GD17742-in]

Repeatable elements

NameClassFamily
DIVER2_I-intLTRPao

Sense Strand Reads

TCGGTCTGTCACTTCGGACTGAGCTGCTGTGCGTAGCTGCTGTGCGTGGGTCAGATAAAGTTGTTGCCAGGACTGCCTCTGCTTCAAAAAACTCATCTGGGCTGGGTTGTGTCTGGAGGCTGCGCGCGCCCTTGCGGTAGCGCCTTAATAGCT
***********************************...((...((.(((.((((((..((((.(((.((((......))))...)))..)))).)))))).))).))...))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Ovary		 SRR618934
Ovary		 SRR553485
Ovary		 SRR553488
Ovary		 SRR553487
Ovary		 M025
embryo
 O001
Testis
 M053
Female-body		 GSM343915
embryo
 M024
male body
 O002
Head
 M023
head
.......................................................TAAAGTTGTTGCCAGGACTGCCTC.......................................................................... 24 0 1 430.00 430 113 96 160 11 48 1 0 0 1 0 0 0
......TGTCACTTCGGACTGAGCTGCTGTGC......................................................................................................................... 26 0 1 361.00 361 119 59 68 60 54 0 0 1 0 0 0 0
........................................................AAAGTTGTTGCCAGGACTGCCTCTGC....................................................................... 26 0 1 206.00 206 141 2 7 47 9 0 0 0 0 0 0 0
......TGTCACTTCGGACTGAGCTGCTGTG.......................................................................................................................... 25 0 1 165.00 165 31 33 15 45 34 3 0 3 1 0 0 0
TCGGTCTGTCACTTCGGACTGAGC................................................................................................................................. 24 0 1 164.00 164 1 142 0 2 5 5 0 9 0 0 0 0
.......................................................TAAAGTTGTTGCCAGGACTGCCTCTGC....................................................................... 27 0 1 148.00 148 51 6 54 8 29 0 0 0 0 0 0 0
........................................................AAAGTTGTTGCCAGGACTGCCTCT......................................................................... 24 0 1 131.00 131 65 0 4 57 5 0 0 0 0 0 0 0
.......................................................TAAAGTTGTTGCCAGGACTGCCT........................................................................... 23 0 1 122.00 122 46 18 29 6 19 4 0 0 0 0 0 0
........................................................AAAGTTGTTGCCAGGACTGCCTC.......................................................................... 23 0 1 105.00 105 59 5 3 33 5 0 0 0 0 0 0 0
.......................................................TAAAGTTGTTGCCAGGACTGCCTCT......................................................................... 25 0 1 92.00 92 28 5 27 2 30 0 0 0 0 0 0 0
......TGTCACTTCGGACTGAGCTGCTGT........................................................................................................................... 24 0 1 82.00 82 14 16 7 28 14 0 0 2 1 0 0 0
........................................................AAAGTTGTTGCCAGGACTGCCT........................................................................... 22 0 1 59.00 59 34 1 2 17 4 1 0 0 0 0 0 0
........................................................AAAGTTGTTGCCAGGACTGCCTCTG........................................................................ 25 0 1 52.00 52 26 1 2 21 2 0 0 0 0 0 0 0
..................................................TCAGATAAAGTTGTTGCCAGGAC................................................................................ 23 0 20 50.25 1005 0 0 3 0 0 320 670 0 0 12 0 0
....TCTGTCACTTCGGACTGAGCTGC.............................................................................................................................. 23 0 1 44.00 44 7 3 8 15 10 0 0 1 0 0 0 0
......TGTCACTTCGGACTGAGCTGCTG............................................................................................................................ 23 0 1 41.00 41 9 9 4 10 5 2 0 2 0 0 0 0
......TGTCACTTCGGACTGAGCTGCTGTGCG........................................................................................................................ 27 0 1 41.00 41 12 3 4 11 7 0 0 4 0 0 0 0
....TCTGTCACTTCGGACTGAGCTGCTG............................................................................................................................ 25 0 1 38.00 38 16 1 9 7 3 1 0 1 0 0 0 0
......TGTCACTTCGGACTGAGCTGCTGTGCGT....................................................................................................................... 28 0 1 31.00 31 5 2 6 6 11 0 0 1 0 0 0 0
.CGGTCTGTCACTTCGGACTGAGCTGC.............................................................................................................................. 26 0 1 30.00 30 3 6 3 10 7 0 0 1 0 0 0 0
......TGTCACTTCGGACTGAGCTGC.............................................................................................................................. 21 0 1 26.00 26 7 6 5 4 3 1 0 0 0 0 0 0
...........................................................................................................TGTGTCTGGAGGCTGCGCGCGCCCT..................... 25 0 20 24.15 483 36 384 0 5 0 0 0 28 30 0 0 0
TCGGTCTGTCACTTCGGACTGAGCTGC.............................................................................................................................. 27 0 1 24.00 24 5 16 0 2 0 0 0 1 0 0 0 0
............TTCGGACTGAGCTGCTGTGCGTAGCTGC................................................................................................................. 28 0 1 24.00 24 13 0 7 0 1 3 0 0 0 0 0 0
....TCTGTCACTTCGGACTGAGCTGCTGTG.......................................................................................................................... 27 0 1 22.00 22 12 0 4 1 5 0 0 0 0 0 0 0
............TTCGGACTGAGCTGCTGTGCGTAGC.................................................................................................................... 25 0 1 22.00 22 7 0 9 2 4 0 0 0 0 0 0 0
..................................................TCAGATAAAGTTGTTGCCAGGACTGCCT........................................................................... 28 0 1 21.00 21 0 1 1 1 0 13 0 1 0 4 0 0
......TGTCACTTCGGACTGAGCTGCTGTGCGTAG..................................................................................................................... 30 0 1 19.00 19 12 0 4 1 2 0 0 0 0 0 0 0
..................................................TCAGATAAAGTTGTTGCCAGGACT............................................................................... 24 0 20 18.10 362 0 0 0 0 0 0 335 19 1 6 0 1
......TGTCACTTCGGACTGAGCTGCT............................................................................................................................. 22 0 1 18.00 18 0 5 0 10 1 2 0 0 0 0 0 0
.....CTGTCACTTCGGACTGAGCTGCTGTGC......................................................................................................................... 27 0 1 16.00 16 8 1 2 2 3 0 0 0 0 0 0 0
........................TGCTGTGCGTAGCTGCTGTGCGTG......................................................................................................... 24 0 1 16.00 16 2 5 0 0 9 0 0 0 0 0 0 0
....TCTGTCACTTCGGACTGAGCTGCTGT........................................................................................................................... 26 0 1 16.00 16 7 0 5 1 0 2 0 1 0 0 0 0
.................................................................................................................TGGAGGCTGCGCGCGCCCTTGCGGTA.............. 26 0 20 15.70 314 163 11 138 0 0 0 0 1 1 0 0 0
.......................................................TAAAGTTGTTGCCAGGACTGCCTCTG........................................................................ 26 0 1 15.00 15 4 0 3 3 5 0 0 0 0 0 0 0
.............................TGCGTAGCTGCTGTGCGTGGGTCAGA.................................................................................................. 26 0 1 14.00 14 1 2 4 4 2 1 0 0 0 0 0 0
...........................TGTGCGTAGCTGCTGTGCGTGGGTCAGA.................................................................................................. 28 0 1 14.00 14 5 0 7 1 1 0 0 0 0 0 0 0
.............................................................................TCTGCTTCAAAAAACTCATCTGGGC................................................... 25 0 1 14.00 14 0 0 0 0 0 9 0 2 3 0 0 0
....TCTGTCACTTCGGACTGAGCTGCT............................................................................................................................. 24 0 1 13.00 13 0 0 1 8 1 3 0 0 0 0 0 0
...GTCTGTCACTTCGGACTGAGC................................................................................................................................. 21 0 1 13.00 13 0 13 0 0 0 0 0 0 0 0 0 0
..GGTCTGTCACTTCGGACTGAGC................................................................................................................................. 22 0 1 12.00 12 0 12 0 0 0 0 0 0 0 0 0 0
..GGTCTGTCACTTCGGACTGAGCTGC.............................................................................................................................. 25 0 1 11.00 11 2 8 0 0 0 0 0 0 1 0 0 0
......................................................ATAAAGTTGTTGCCAGGACTGCCTC.......................................................................... 25 0 1 11.00 11 1 4 6 0 0 0 0 0 0 0 0 0
............TTCGGACTGAGCTGCTGTGCGTAGCT................................................................................................................... 26 0 1 10.00 10 3 0 3 0 4 0 0 0 0 0 0 0
............TTCGGACTGAGCTGCTGTGCGTAGCTG.................................................................................................................. 27 0 1 10.00 10 2 0 2 2 4 0 0 0 0 0 0 0
.............................................................TGTTGCCAGGACTGCCTCTGCTT..................................................................... 23 0 1 10.00 10 0 0 3 0 7 0 0 0 0 0 0 0
.............................................................................TCTGCTTCAAAAAACTCATCTGGG.................................................... 24 0 1 10.00 10 0 0 0 0 0 9 0 1 0 0 0 0
..................................................TCAGATAAAGTTGTTGCCAGGACTGCCTC.......................................................................... 29 0 1 10.00 10 1 0 1 0 2 5 0 0 0 1 0 0
...........................................................................................................TGTGTCTGGAGGCTGCGCGCGCCC...................... 24 0 20 8.60 172 0 134 7 0 0 28 0 3 0 0 0 0
.....................................TGCTGTGCGTGGGTCAGATAAAGTT........................................................................................... 25 0 9 8.33 75 3 9 19 5 39 0 0 0 0 0 0 0
...............................................GGGTCAGATAAAGTTGTTGCCAGGA................................................................................. 25 0 9 8.11 73 1 1 43 0 28 0 0 0 0 0 0 0
....TCTGTCACTTCGGACTGAGCTGCTGTGC......................................................................................................................... 28 0 1 8.00 8 5 0 3 0 0 0 0 0 0 0 0 0
......TGTCACTTCGGACTGAGCTGCTGGGC......................................................................................................................... 26 1 1 8.00 8 1 0 1 3 3 0 0 0 0 0 0 0
......................................................ATAAAGTTGTTGCCAGGACTGCCT........................................................................... 24 0 1 8.00 8 2 2 0 3 1 0 0 0 0 0 0 0
.......................................................TAAAGTTGTTGCCAGGAC................................................................................ 18 0 20 7.50 150 0 0 0 0 0 0 75 0 0 0 75 0
.............TCGGACTGAGCTGCTGTGCGTAGCTGC................................................................................................................. 27 0 1 7.00 7 4 0 1 0 2 0 0 0 0 0 0 0
....TCTGTCACTTCGGACTGAGC................................................................................................................................. 20 0 1 7.00 7 0 3 0 4 0 0 0 0 0 0 0 0
.....................................TGCTGTGCGTGGGTCAGATAAAGT............................................................................................ 24 0 9 6.11 55 3 14 10 5 22 0 0 0 1 0 0 0
................................................................TGCCAGGACTGCCTCTGCTTCAAAAAAC............................................................. 28 0 1 6.00 6 1 0 2 1 2 0 0 0 0 0 0 0
.............................................................TGTTGCCAGGACTGCCTCTGCTTC.................................................................... 24 0 1 6.00 6 1 0 0 0 3 2 0 0 0 0 0 0
...GTCTGTCACTTCGGACTGAGCTGC.............................................................................................................................. 24 0 1 6.00 6 1 5 0 0 0 0 0 0 0 0 0 0
.........CACTTCGGACTGAGCTGCTGTGCG........................................................................................................................ 24 0 1 6.00 6 3 0 0 2 1 0 0 0 0 0 0 0
.........CACTTCGGACTGAGCTGCTGTGCGT....................................................................................................................... 25 0 1 6.00 6 1 2 0 1 2 0 0 0 0 0 0 0
.........CACTTCGGACTGAGCTGCTGTGCGTAGC.................................................................................................................... 28 0 1 5.00 5 4 0 0 1 0 0 0 0 0 0 0 0
.....CTGTCACTTCGGACTGAGCTGC.............................................................................................................................. 22 0 1 5.00 5 2 1 1 1 0 0 0 0 0 0 0 0
...........................TGTGCGTAGCTGCTGTGCGTGGG....................................................................................................... 23 0 1 5.00 5 1 2 0 2 0 0 0 0 0 0 0 0
...........................TGTGCGTAGCTGCTGTGCGTGGGTC..................................................................................................... 25 0 1 5.00 5 0 2 1 0 2 0 0 0 0 0 0 0
...........................TGTGCGTAGCTGCTGTGCGTGG........................................................................................................ 22 0 1 5.00 5 1 3 0 0 0 0 0 0 1 0 0 0
......TGTCACTTCGGACTGAGC................................................................................................................................. 18 0 1 5.00 5 0 5 0 0 0 0 0 0 0 0 0 0
......................................................ATAAAGTTGTTGCCAGGACTGCCTCTGC....................................................................... 28 0 1 5.00 5 1 0 4 0 0 0 0 0 0 0 0 0
................................................................TGCCAGGACTGCCTCTGCTTCAAAAAA.............................................................. 27 0 1 5.00 5 1 0 2 0 2 0 0 0 0 0 0 0
........................................TGTGCGTGGGTCAGATAAAGTTGT......................................................................................... 24 0 9 4.11 37 3 20 6 1 6 0 0 0 1 0 0 0
...............................................................TTGCCAGGACTGCCTCTGCTTCAAA................................................................. 25 0 1 4.00 4 0 0 0 2 2 0 0 0 0 0 0 0
...........................TGTGCGTAGCTGCTGTGCGTGGGT...................................................................................................... 24 0 1 4.00 4 2 1 0 1 0 0 0 0 0 0 0 0
...........................TGTGCGTAGCTGCTGTGCGTG......................................................................................................... 21 0 1 4.00 4 1 3 0 0 0 0 0 0 0 0 0 0
........................................................AAAGTTGTTGCCAGGACTGCCTCTGCT...................................................................... 27 0 1 4.00 4 3 0 0 0 0 0 0 1 0 0 0 0
........................TGCTGTGCGTAGCTGCTGTGCGTGG........................................................................................................ 25 0 1 4.00 4 0 2 1 0 1 0 0 0 0 0 0 0
.................................................................................................TGGGCTGGGTTGTGTCTGGAGGCTG............................... 25 0 20 4.00 80 0 5 0 0 75 0 0 0 0 0 0 0
............TTCGGACTGAGCTGCTGTGCGTAG..................................................................................................................... 24 0 1 4.00 4 1 0 0 2 1 0 0 0 0 0 0 0
.................................TAGCTGCTGTGCGTGGGTCAGA.................................................................................................. 22 0 1 4.00 4 0 3 0 0 1 0 0 0 0 0 0 0
...............................................................................TGCTTCAAAAAACTCATCTGGGCTGG................................................ 26 0 1 4.00 4 0 1 0 0 1 0 0 2 0 0 0 0
......TGTCACTTCGGACTGAGCT................................................................................................................................ 19 0 1 4.00 4 3 0 0 0 1 0 0 0 0 0 0 0
............................................................................................TCATCTGGGCTGGGTTGTGTCTGGA.................................... 25 0 1 4.00 4 0 3 0 0 0 1 0 0 0 0 0 0
..................................................................................TTCAAAAAACTCATCTGGGCTGGGT.............................................. 25 0 1 4.00 4 2 1 0 0 0 0 0 1 0 0 0 0
...............................................GGGTCAGATAAAGTTGTTGCCAG................................................................................... 23 0 9 3.89 35 0 17 0 0 0 0 9 0 0 0 9 0
.................................................................................................TGGGCTGGGTTGTGTCTGGAGGCTGC.............................. 26 0 20 3.80 76 31 9 35 0 0 0 0 1 0 0 0 0
..................................................TCAGATAAAGTTGTTGCCAGGACTGCC............................................................................ 27 0 20 3.40 68 1 0 0 0 0 0 61 4 0 2 0 0
.................................TAGCTGCTGTGCGTGGGTCAG................................................................................................... 21 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTGTGTCTGGAGGCTGCGCGCGCCC...................... 25 0 20 3.00 60 0 53 6 0 0 0 0 1 0 0 0 0
........................................................AAAGTTGTTGCCAGGACTGCCTCTGCTT..................................................................... 28 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0
..........ACTTCGGACTGAGCTGCTGTGCG........................................................................................................................ 23 0 1 3.00 3 1 0 0 0 2 0 0 0 0 0 0 0
.....CTGTCACTTCGGACTGAGCTGCTGTG.......................................................................................................................... 26 0 1 3.00 3 1 0 1 1 0 0 0 0 0 0 0 0
.........CACTTCGGACTGAGCTGCTGTGCGTAG..................................................................................................................... 27 0 1 3.00 3 0 0 0 1 2 0 0 0 0 0 0 0
.........CACTTCGGACTGAGCTGCTGTGCGTA...................................................................................................................... 26 0 1 3.00 3 0 0 1 0 2 0 0 0 0 0 0 0
...........................TGTGCGTAGCTGCTGTGCGTGGGTCA.................................................................................................... 26 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
.................................TAGCTGCTGTGCGTGGG....................................................................................................... 17 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0
...........................TGTGCGTAGCTGCTGTGCGTGGGTCAA................................................................................................... 27 1 1 3.00 3 0 0 0 2 1 0 0 0 0 0 0 0
........................TGCTGTGCGTAGCTGCTGTGCGT.......................................................................................................... 23 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0
...........................TGTGCGTAGCTGCTGTGCGTGGGTCAGAA................................................................................................. 29 1 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0
........TCACTTCGGACTGAGCTGCTGTGCG........................................................................................................................ 25 0 1 3.00 3 1 1 0 1 0 0 0 0 0 0 0 0
TCGGTCTGTCACTTCGGACTGAG.................................................................................................................................. 23 0 1 3.00 3 0 2 0 0 1 0 0 0 0 0 0 0
......TGTCACTTCGGACTGAGCTG............................................................................................................................... 20 0 1 3.00 3 1 1 0 1 0 0 0 0 0 0 0 0
..............................................TGGGTCAGATAAAGTTGTTGCCAGGAC................................................................................ 27 0 9 2.33 21 2 0 5 4 10 0 0 0 0 0 0 0
...........................................................................................................TGTGTCTGGAGGCTGCGCGCGCCCTT.................... 26 0 20 2.30 46 11 34 0 0 1 0 0 0 0 0 0 0
........................................TGTGCGTGGGTCAGATAAAGTTGTT........................................................................................ 25 0 9 2.22 20 2 1 5 1 11 0 0 0 0 0 0 0
........................................................AAAGTTGTTGCCAGGACTGCCTTTT........................................................................ 25 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................TGTGCGTAGCTGCTGTGCGTGGGTCAGAT................................................................................................. 29 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.................................TAGCTGCTGTGCGTGGGTCAGATAAAGT............................................................................................ 28 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0
..........ACTTCGGACTGAGCTGCTGTGCGTAGC.................................................................................................................... 27 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................ATCTGGGCTGGGTTGTGTCTGGA.................................... 23 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
................................................................TGCCAGGACTGCCTCTGCTTCAAAAAACTC........................................................... 30 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................AAGTTGTTGCCAGGACTGCCTCTGC....................................................................... 25 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................AAAAGTTGTCTCCAGGACTGCCT........................................................................... 23 3 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0
........................................................................................AAACTCATCTGGGCTGGGTTGTGTC........................................ 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.............TCGGACTGAGCTGCTGTGCGTAGCT................................................................................................................... 25 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
.......................................................TAAAGTTGTTGCCAGGACTGCCTCTGCT...................................................................... 28 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................GATAAAGTTGTTGCCAGGACTGCCT........................................................................... 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
......TTTCACTTCGGACTGAGCTGCTGTGC......................................................................................................................... 26 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.CGGTCTGTCACTTCGGACTGAGC................................................................................................................................. 23 0 1 2.00 2 0 1 0 0 0 0 0 1 0 0 0 0
.............TCGGACTGAGCTGCTGTGCGTAGC.................................................................................................................... 24 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0
.............TCGGACTGAGCTGCTGTGCGTAGCTG.................................................................................................................. 26 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0
..GGTCTGTCACTTCGGACTGAGCTG............................................................................................................................... 24 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
........................................................AAAGTTGTTGCCAGGACTGCCTCTA........................................................................ 25 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
....TCTGTCACTTCGGACTGAGCTGCTGTGCG........................................................................................................................ 29 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
............TTCGGACTGAGCTGCTGTGCGTA...................................................................................................................... 23 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0
....TCTGTCACTTCGGACTGAGCT................................................................................................................................ 21 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0
....................................................................AGGACTGCCTCTGCTTCAAAAAACTC........................................................... 26 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0
................GACTGAGCTGCTGTG.......................................................................................................................... 15 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
......TGTCACTTCGGACTGAG.................................................................................................................................. 17 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0
.............................TGCGTAGCTGCTGTGCGTGGGTCA.................................................................................................... 24 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
...............................................................................TGCTTCAAAAAACTCATCTGGGC................................................... 23 0 1 2.00 2 0 1 0 0 0 0 0 1 0 0 0 0
.............................................................TGTTGCCAGGACTGCCTC.......................................................................... 18 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
......TGTCACTTCGGACTGAGCTGCTGTGCA........................................................................................................................ 27 1 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0
......TGTCACTTCGGACTGAGCTGCTGTT.......................................................................................................................... 25 1 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0
...........CTTCGGACTGAGCTGCTGTGC......................................................................................................................... 21 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
......TGTCACTTCGGACTGAGCTGCTGTGCGTA...................................................................................................................... 29 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
......TGTCACTTCGGACTGAGCTGCTGTGG......................................................................................................................... 26 1 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0
........................................TGTGCGTGGGTCAGATAAAGTTGTTG....................................................................................... 26 0 9 1.89 17 0 0 1 4 12 0 0 0 0 0 0 0
......................................................................................................TGGGTTGTGTCTGGAGGCTGCGCGC.......................... 25 0 20 1.80 36 0 36 0 0 0 0 0 0 0 0 0 0
.......................................................TAAAGTTGTTGCCAGGACT............................................................................... 19 0 20 1.75 35 0 34 0 1 0 0 0 0 0 0 0 0
.................................................................................................TGGGCTGGGTTGTGTCTGGAGGCT................................ 24 0 20 1.75 35 0 0 0 0 35 0 0 0 0 0 0 0
..................................................TCAGATAAAGTTGTTGCCAGGACTGC............................................................................. 26 0 20 1.70 34 0 18 0 0 2 0 0 14 0 0 0 0
..........................................TGCGTGGGTCAGATAAAGTTGTTGC...................................................................................... 25 0 9 1.67 15 3 2 4 1 5 0 0 0 0 0 0 0
........................................TGTGCGTGGGTCAGATAAAGTTGTTGC...................................................................................... 27 0 9 1.67 15 1 0 2 2 10 0 0 0 0 0 0 0
.................................................................................................TGGGCTGGGTTGTGTCTGGAGGC................................. 23 0 20 1.60 32 6 0 5 3 17 0 0 1 0 0 0 0
.............................................................................................................TGTCTGGAGGCTGCGCGCGCCCT..................... 23 0 20 1.45 29 0 28 0 0 0 0 0 0 1 0 0 0
.....................................TGCTGTGCGTGGGTCAGATAAAGTTG.......................................................................................... 26 0 9 1.44 13 0 0 0 0 3 0 0 1 0 0 9 0
......................................................................................................TGGGTTGTGTCTGGAGGCTGCGCGCGCC....................... 28 0 20 1.35 27 9 5 12 0 0 0 0 1 0 0 0 0
.................................................................................................................TGGAGGCTGCGCGCGCCCTTGCGG................ 24 0 20 1.25 25 6 0 8 0 7 0 0 4 0 0 0 0
...........................................................................................................TGTGTCTGGAGGCTGCGCGCGCC....................... 23 0 20 1.25 25 17 0 4 0 0 0 0 1 3 0 0 0
...............................................GGGTCAGATAAAGTTGTTGCCAGG.................................................................................. 24 0 9 1.22 11 0 2 3 0 6 0 0 0 0 0 0 0
..............................................................................................................GTCTGGAGGCTGCGCGCGCCCT..................... 22 0 20 1.15 23 0 23 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTGTCTGGAGGCTGCGCGCGC........................ 22 0 20 1.15 23 0 23 0 0 0 0 0 0 0 0 0 0
.....................................TGCTGTGCGTGGGTCAGATAAAGTTGT......................................................................................... 27 0 9 1.11 10 0 2 4 0 3 0 0 0 1 0 0 0
...........................TGTGCGTAGCTGCTGTGC............................................................................................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....CTGTCACTTCGGACTGAGCTGCT............................................................................................................................. 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
......TGTCACTTCGGACTGAGCTACTGTG.......................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......TTCACTTCGGACTGAGCTGCTGTGC......................................................................................................................... 25 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.........GACTTCGGACTGAGCTGCTGTGCGTAG..................................................................................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...................TGAGCTGCTGTGCGTAGCTGCTGTGC............................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....TCTGTCGCTTCGGACTGAGCTGCTGT........................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................TAAAGTTGTTGCCAGGACTACCTCTGC....................................................................... 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................TGTGCGTAGCTGCTGTGCGTT......................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................TGTGCGTAGCTGCTGTGCGTGGGTCAG................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.....TTGTCACTTCGGACTGAGCTGCTGTGC......................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................AAAGGTGTTGCCAGGACTGCCTCTGC....................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................CCAGGACTGCCTCTGC....................................................................... 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......TGTCAATTCGGACTGAGCTGCTGTGCG........................................................................................................................ 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............TTCGGACTGAGCTGCTGTGCGTAGT.................................................................................................................... 25 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.................ACTGAGCTGCTGTGCGTAGCTGC................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......TGTAACTTCGGACTGAGCTGCTGTGC......................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................CGTAGCTGCTGTGCGTGGGTCAGATA................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................TGCGTAGCTGCTGTGCGTGGGTCAGAT................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............CGGACTGAGCTGCTGTGCGTAGC.................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................TCAAGTTGTTGCCAGGACTGCCTC.......................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................TGTGCGTAGCTGCTGTGCGTA......................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......TGTCGCTTCGGACTGAGCTGCTGT........................................................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.......GTCACTTCGGACTGAGCTGCTGTGC......................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.........CACTTCGGACTGAGCTGCTGTGC......................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....TCTGTCACTTCGGACTGAGCTG............................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
......TGTTACTTCGGACTGAGCTGCTGT........................................................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..............CGGACTGAGCTGCTGTGCGTAGCTGCTA............................................................................................................... 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.CGGTCTGTCACTTCGGACTGAGCTG............................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................ATCTGGGCTGGGTTGTGTCTAGA.................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................AAAAAACTCATCTGGGCTGGGTT............................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................TGCCAGGACTGCCTCTGCTTCAAA................................................................. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
....GCTGTCACTTCGGACTGAGCTGCTG............................................................................................................................ 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................TGCCTCTGCTTCAAAAAACTGATCTG...................................................... 26 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................TAAAGTTGTTGCCAGGACTGCCTCTGG....................................................................... 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.....CTGTCACTTCGGACTGAGC................................................................................................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................TGTTGCCAGGACTGCCTCTGC....................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......TGTCACTTCGGACTG.................................................................................................................................... 15 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................TTCAAAAAACTCATCTGGGCTGGGTTG............................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................GTTGCCAGGACTGCCTCTGCTT..................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................TAAAGTTGTTGCCAGGACTGCGTC.......................................................................... 24 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
....TCTGTCACTTCGGACTGAG.................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............TCGGACTGAGCTGCTGTGCGTA...................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
TCGGTCTGTCACTTCGGACTGAGCTG............................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................AGTTGTTGCCAGGACTGCCTCTG........................................................................ 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.................ACTGAGCTGCTGTGCGTAGCTGCTGT.............................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.CGGTCTGTCACTTTGGACTGAGCTG............................................................................................................................... 25 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................AAAGTTGTTGCCAGGACTCCCTCT......................................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
............TTTGGACTGAGCTGCTGTGCGTAGCTG.................................................................................................................. 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
TCAGTCTGTCACTTCGGACTGAGC................................................................................................................................. 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................GCCAGGACTGCCTCTGCTTCAAAAAAC............................................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......TGTCACTTCGGACTGAGCTGATGTC.......................................................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................AAAGTTGTTGGCAGGACTGCCTCTGC....................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....CTGTCACTTCGGACTGAGCTGCTGT........................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................CTTCTTCAAAAAACTCATCTGGGCT.................................................. 25 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
......GGTCACTTCGGACTGAGCTGCTGTGCGT....................................................................................................................... 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................TGCCTCTGCTTCAAAAAACTCATCTGGG.................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
....TCTGTCACTTCGGACTGA................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................GTAGCTGCTGTGCGTGGGTCAG................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................TGCCTCTGCTTCAAAAAACTCATCTGGGC................................................... 29 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
........................................................AAAGTTGTTGCCAGGACTGCCTCTAA....................................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......TGTCACTTCGGACTGAGCTGG.............................................................................................................................. 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................AAAGTTGTTGCCAGGACTGCCTCTT........................................................................ 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................TGTGCGTAGCTGCTGTGCGTGGGGCAGA.................................................................................................. 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....GTGTCACTTCGGACTGAGCTGCTGTGC......................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..GGTCTGTCACTTCGGACTG.................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................TAAAGTTGATGCCAGGACTGCCTC.......................................................................... 24 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
......TGTGACTTCGGACTGAGCTGC.............................................................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................TAAAGTTGTTGCCAGGACTTCCTCTGC....................................................................... 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
......TGTCACTTCGGATTGAGCTG............................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................TGCGTAGCTGCTGTGCGTGGGTCAGATA................................................................................................ 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................TGCGTAGCTGCTGTGCGTGGGT...................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................TGCTTCAACAAACTCATCTGGGC................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................TGTTGCCAGGACTGCCTCT......................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................AACTCATCTGGGCTGGGTTGTGT......................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......TGTCACTTCGGACTGAGCTGCTA............................................................................................................................ 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
....TCTGTCACTTCGGACGGGGCTGC.............................................................................................................................. 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................TAGCTGCTGTGCGTGG........................................................................................................ 16 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TTGCCAGGACTGCCTCTGCTTCAAAA................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
..............CGGACTGAGCTGCTGTGCGTAGCTGC................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........TCACTTCGGACTGAGCTGCTGTGCGTA...................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........ACTTCGGACTGAGCTGCTGTGCGTAGCTG.................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................GATAAAGTTGTTGCCAGGACTGCCTC.......................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................TGTTGCCAGGACTGCCT........................................................................... 17 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................TGCTTCAAAAAACTCATCTGGGCTGGG............................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
..........ACTTCGGACTGAGCTGC.............................................................................................................................. 17 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................TTCAAAAAACTCATCTGGGCTGGGTT............................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....CAGTCACTTCGGACTGAGCTGC.............................................................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........ACTTCGGACTGAGCTGCTGTGCGT....................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
......TGTCACTTCGGACTGAGCTGCTGTGCGTAGC.................................................................................................................... 31 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................TGCGTAGCTGCTGTGCGTGGGTCAGAA................................................................................................. 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
............TGCGGACTGAGCTGCTGTGCGTAGC.................................................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......TGTCATTTCGGACTGAGCTGCTGTGC......................................................................................................................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................TAAAGTTGTTGCCAGGACTGCCTCTGT....................................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......TGTCACTTCGTACTGAGCTGCTGTGC......................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................TAAAGTTGTTGCCAGGACTGCCTCTGCTTCAA.................................................................. 32 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............TTCGGACTGAGCTGCTGTGCGT....................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
......TGTCACTTCGGACTGAGCTGCTGTGCGA....................................................................................................................... 28 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.....CTGCCACTTCGGACTGAGCTGCTGTGC......................................................................................................................... 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................TGCCAGGACTGCCTCTGCTTCAAAA................................................................ 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................AAAGTTGTTGCCAGGACTGCCTG.......................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................TCATCTGAGCTGGGTTGTGTCTGGA.................................... 25 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
......TGTCACTTCGGACTGAGCTTCTGTGC......................................................................................................................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................CTAAAGTTGTTGCCAGGACTGCCTC.......................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....CTGTCACTTCGGACTGAGCTGCTG............................................................................................................................ 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................TAGCTGCTGTGCGTGGGTCAGAA................................................................................................. 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........ACTTCGGACTGAGCTGCT............................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................TAAAGTTGTTGCCAGGACTGGCT........................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................AAAGTTGTTGCCAGGACTGCAT........................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................TGCCAGGACTGCCTCTGCTTCAA.................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................AAAGTTGTTGACAGGACTGCCTC.......................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................TGCTGTGCGTAGCTGCTGTGCGTA......................................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................TGCCAGGACTGCCTCTGCTTCAAAAA............................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................GCTGTGCGTAGCTGCTG............................................................................................................... 17 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................ATCTGGGCTGGGTTGTGTCTGGAG................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................TAAAGTTGTTGCCAGGACTGCCTCTGCTTC.................................................................... 30 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................TGCTTCAAAAAACTCATCTGGGCTGGGT.............................................. 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
....TCTGTTACTTCGGACTGAGCTGCTGTGCG........................................................................................................................ 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TCTGCTTCAAAAAACTCATCTGGAC................................................... 25 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................GTTGCCAGGACTGCCTC.......................................................................... 17 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....TCTGTCACTTCGGACTGAGCTGCTGTGCGT....................................................................................................................... 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TCTGCTTCAAAAAACTCATCTGGGCT.................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................TAAGGTTGTTGCCAGGACTGCCTCTGC....................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................TAAAGTTGTTGCCAGGACTGCCTCTGCA...................................................................... 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................TTGTTGCCAGGACTGCCTCTGCT...................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................TGTTGCCAGGACTGCCTCTGCAA..................................................................... 23 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
......TGTCACTTCGGACTGAGCGG............................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
TCGGTCTGTCACTTCGGACTGAGT................................................................................................................................. 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......TGCCGCTTCGGACTGAGCTGCTGTGC......................................................................................................................... 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................AAAGTTGTTGGCAGGACTGCCT........................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........CTTCGGACTGAGCTGCTGGGC......................................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..GGTCTGTCACTTCGGACTGGGC................................................................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
TGGGTCTGTCACTTCGGACTGAGC................................................................................................................................. 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................TAAAGCTGTTGCCAGGACTGCCTCTGC....................................................................... 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................TAAAGTTGTTGCCAGGACTGCCTCTAAA...................................................................... 28 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
TTGGTCTGTCACTTCGGACTGAGC................................................................................................................................. 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......TTTCACTTCGGACTGAGCTGCT............................................................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................AGATAAAGTTGTTGCCAGGACTGCCTC.......................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................TAAAGTTGTTGCCAGGACTGCCTCTGCTT..................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................TCAAAAAACTCATCTGGGCTGGGTTG............................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AACTCATCTGGGCTGGGTTGTGTCTGGA.................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................TAAAGTTTTTGCCAGGACTGCCTC.......................................................................... 24 1 2 1.00 2 0 0 0 0 2 0 0 0 0 0 0 0
........................................................AAAGTTGTTGCCAGGACTGCCTCTGCTTC.................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TCTGCTTCAAAAAACTCATCTGGGTGG................................................. 27 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................TTGCCAGGACTGCCTCTGCTT..................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........TCACTTCGGACTGAGCTGCTGT........................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................GTAGCTGCTGTGCGTGG........................................................................................................ 17 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AGCTATTAAGGCGCTACCGCAAGGGCGCGCGCAGCCTCCAGACACAACCCAGCCCAGATGAGTTTTTTGAAGCAGAGGCAGTCCTGGCAACAACTTTATCTGACCCACGCACAGCAGCTACGCACAGCAGCTCAGTCCGAAGTGACAGACCGA
***********************************......((...((.(((.((((((.((((..(((...((((......)))).))).))))..)))))).))).))...))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
Ovary		 SRR553485
Ovary		 SRR553486
Ovary		 SRR553488
Ovary		 SRR553487
Ovary		 M053
Female-body		 M025
embryo
 O001
Testis
 GSM343915
embryo
 O002
Head
................................................................................................TATCTGACCCACGCACAGCAGCTACG............................... 26 0 1 16.00 16 6 6 0 0 4 0 0 0 0 0
......................................................CAGACGAGTTTTTTGAAGCAGAGG........................................................................... 24 1 20 10.45 209 0 127 0 0 82 0 0 0 0 0
................................................................................................TATCTGACCCACGCACAGCAGCTAC................................ 25 0 1 9.00 9 3 1 0 0 0 2 1 1 0 1
.................................................................TTTGAAGCAGAGGCAGTCCTGG.................................................................. 22 0 1 7.00 7 0 0 1 6 0 0 0 0 0 0
................................................................TTTTGAAGCAGAGGCAGTCCTGGC................................................................. 24 0 1 6.00 6 3 2 1 0 0 0 0 0 0 0
................................................................................................TATCTGACCCACGCACAGCAGCTA................................. 24 0 1 6.00 6 3 2 0 0 1 0 0 0 0 0
......................................................................................................................TACGCACAGCAGCTCAGTCCGAAGT.......... 25 0 1 5.00 5 1 3 0 1 0 0 0 0 0 0
................................................................................................TATCTGACCCACGCACAGCAGCTACGC.............................. 27 0 1 5.00 5 2 1 0 0 0 1 1 0 0 0
.............................................................................................................................AGCAGCTCAGTCCGAAGTGACAGAC... 25 0 1 5.00 5 4 0 0 0 0 0 0 0 1 0
................................................................................................TATCTGACCCACGCACAGCAGCTACGCAC............................ 29 0 1 5.00 5 0 4 0 1 0 0 0 0 0 0
................................................................TTTTGAAGCAGAGGCAGTCCTGG.................................................................. 23 0 1 5.00 5 1 0 0 2 1 1 0 0 0 0
..............................................................TTTTTTGAAGCAGAGGCAGTCCTGG.................................................................. 25 0 1 4.00 4 0 0 1 2 1 0 0 0 0 0
...................................................................................................................AGCTACGCACAGCAGCTCAGTCCGA............. 25 0 1 4.00 4 0 1 1 1 1 0 0 0 0 0
................................................................................................................AGCAGCTACGCACAGCAGCTCAGTCCGA............. 28 0 1 4.00 4 0 1 1 2 0 0 0 0 0 0
..............................................................TTTTTTGAAGCAGAGGCAGTCCTGA.................................................................. 25 1 1 3.00 3 0 0 3 0 0 0 0 0 0 0
.........................................ACACAACCCAGCCCAGAT.............................................................................................. 18 0 1 3.00 3 1 0 0 0 0 0 0 2 0 0
......................................................................AGCAGAGGCAGTCCTGG.................................................................. 17 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0
..................................................................TTGAAGCAGAGGCAGTCCTGG.................................................................. 21 0 1 3.00 3 1 0 1 1 0 0 0 0 0 0
......................................................................................................................TACGCACAGCAGCTCAGTCCGAAGTGACAGA.... 31 0 1 3.00 3 0 1 1 0 1 0 0 0 0 0
...............................................................TTTTTGAAGCAGAGGCAGTCCTGGA................................................................. 25 1 1 3.00 3 0 0 3 0 0 0 0 0 0 0
...................................................................................................................AGCTACGCACAGCAGCTCAGTCCGAAGT.......... 28 0 1 3.00 3 0 1 0 1 1 0 0 0 0 0
..................................................................................................TCTGACCCACGCACAGCAGCTACGCAC............................ 27 0 1 3.00 3 0 0 0 0 3 0 0 0 0 0
............................................................................................................................CAGCAGCTCAGTCCGAAGTGACAGAC... 26 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.......................................................................................CAAGAACTTTCTCTGACCCG.............................................. 20 3 12 3.00 36 0 1 0 0 0 0 15 0 0 0
................................................................................................TATCTGACCCACGCACAGCAGCTACGCA............................. 28 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0
.......................................................................................CAACAACTTTATCTGACCCACGCA.......................................... 24 0 9 2.44 22 0 1 13 4 4 0 0 0 0 0
......................................................................................................................TACGCACAGCAGCTCAGTCCGAAGTGACA...... 29 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0
...................................................................................................................AGCTACGCACAGCAGCTCAGTCCGAA............ 26 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0
.............................................................................................................................AGCAGCTCAGTCCGAAGTGACA...... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................ACAGCAGCTCAGTCCGAAGTGACA...... 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................AGCAGCTCAGTCCGAAGTGACAGACCGA 28 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.................................................................TTTGAAGCAGAGGCAGTCCTGT.................................................................. 22 1 1 2.00 2 0 0 1 1 0 0 0 0 0 0
...................................................................................................................AGCTACGCACAGCAGCTCAGTCCGAAG........... 27 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
......................................................................................................................TACGCACAGCAGCTCAGTCCGAAGTGA........ 27 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
...................................................................TGAAGCAGAGGCAGTCCTGGCAACAA............................................................ 26 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0
................................................................TTTTGAAGCAGAGGCAGTCCTGGCA................................................................ 25 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0
...........................................................................................................................ACAGCAGCTCAGTCCGAAGTGACAGA.... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
........................................................................................................................CGCACAGCAGCTCAGTCCGAAGTGAC....... 26 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0
.............................................................GTTTTTTGAAGCAGAGGCAGTCCTGG.................................................................. 26 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
.................................................................TTTGAAGCAGAGGCAGTCCTGGC................................................................. 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................ACAGCAGCTCAGTCCGAAGTGACAGAC... 27 0 1 2.00 2 0 0 0 0 0 0 1 0 1 0
................................................................................................TATCTGACCCACGCACAGCAGCT.................................. 23 0 9 2.00 18 7 5 0 0 6 0 0 0 0 0
.......................................................................................CAACAACTTTATCTGACCCACGCAC......................................... 25 0 9 1.89 17 0 0 12 2 1 2 0 0 0 0
.............................................................................................CTTTATCTGACCCACGCACAGCAGC................................... 25 0 9 1.89 17 0 0 0 0 0 8 9 0 0 0
......................................................CAGACGAGTTTTTTGAAGCAGAGGC.......................................................................... 25 1 20 1.40 28 0 0 0 2 26 0 0 0 0 0
.......................................................................................CAACAACTTTATCTGACCCACGC........................................... 23 0 9 1.33 12 0 0 8 3 0 0 1 0 0 0
........................................................................................AACAACTTTATCTGACCCACGCAC......................................... 24 0 9 1.22 11 0 3 5 0 3 0 0 0 0 0
.................................................................TTTGAAGCAGAGGCAGTCC..................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................CTACGCACAGCAGCTCAGGTCC.............. 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................TTTTTGAAGCAGAGGCAGTTCTGAT................................................................. 25 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...................................................GCCCAGATGAGTTTTTTGAAGCAGA............................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................TTTTTTGAAGCAGAGGCAGTCCTGGC................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................GGCCAGATGAGTTTTTTGAAGCAGA............................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................AGCAGCTCAGTCCGAAGTGACAGACC.. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................TTTGAAGCAGAGGCAGTCCTG................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................TTTGAAGCAGAGGCAGTCCTGGT................................................................. 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
................................................................................................................................AGCTCAGTCCGAAGTGACAGACCG. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................TTTGAAGCAGAGGCAGTCCTGGA................................................................. 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...................................................................TGAAGCAGAGGCAGTCCTGGCA................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................CAGATGAGTTTTTTTAAGCAGAGGC.......................................................................... 25 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0
....................................................CCCAGATGAGTTTTTCGAAGCAGAGGC.......................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................TCCAGACACAACCCAGCCCAGATGA............................................................................................ 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
................................................................................................................AGCAGCTACGCACAGCAGCTCAGTCCG.............. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................................TTTTTGAAGCAGAGGCAGTCCTGG.................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................................................TTTGAAGCAGAGGCAGTCCTGGCT................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................AGCAGCTACGCACAGCAGCTCAGTCCGAA............ 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................................................................................TATCTGACCCACGCACAGCAGCTACGT.............................. 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................GCAGCTACGCACAGCAGCTCAGTCCGAAG........... 29 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...............................................................TTTTTGAAGCAGAGGCAGTCCTGGT................................................................. 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................................TTTTTGAAGCAGAGGCAGTCCTGGC................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................AGCTCAGTCCGAAGTGACAGA.... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................TATCTGACCCACGCACAGCAGCTACGCACA........................... 30 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................TTTTGAAGCAGAGGCAGTCCTG................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................CCACGCACAGCAGCTAC................................ 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................AGCAGCTACGCACAGCATCTCAGTCCGA............. 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................................TACGCACAGCAGCTCAGTCCGAAGTG......... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.................................................................TCTGAAGCAGAGGCAGTCCTGGC................................................................. 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................................TTGTTGAAGCAGAGGCAGTCCTGG.................................................................. 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................GCAGCTCAGTCCGAAGTGACAGACCGA 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................................TTTTTGAAGCAGAGGCAGTCCTGGAT................................................................ 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................................TATCTGACCCACGCACAGCTGCTACGCACAG.......................... 31 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................TGAAGCAGAGGCAGTCCTGGT................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................CGCACAGCAGCTCAGTCCGAAGTGACAGA.... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................AGCAGCTACGCACAGCAGCTCAGTCCA.............. 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................TTTGAAGCAGAGGCAGTCCTGGCA................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................CAGATGAGTTTTTTGAAGCAGAGG........................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.................................................................TTTGAAGCAGAGGCAGTCCT.................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................TGAAGCAGAGGCAGTCCTGG.................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................................CGCACAGCAGCTCAGTCCGAAGT.......... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................ACAGCAGCTCAGTCCGAAGTGACAGACCG. 29 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................ACGCACAGCAGCTCAGTCCGAAGTGACA...... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................TTTTTTGAAGCAGAGGCAGTCCTGGCAA............................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................TACGCACAGCAGCTCAGTCCGA............. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................CTGCAGCTCAGTCCGAAGTGACAGACC.. 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................TTTTTGAAGCAGAGGCAGTCCTG................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................CAGCAGCTCAGTCCGAAGTGACAGCC... 26 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0
........................................................................CAGAGGCAGTCCTGGC................................................................. 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................TGACCCACGCACAGCAGCTA................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................TCAGTCCGAAGTGACAGA.... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................AGCTCAGTCCGAAGTGAC....... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................AGCTCAGTCCGAAGTGACA...... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................CAGTAGCTCAGTCCGAAGTGACAGAC... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................TTTGAAGCAGAGGCAGTCCCGGGG................................................................ 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................TTTGAAGCAGAGGCAGTCCTGAT................................................................. 23 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...............................................................TTTTTGAAGCAGAGGCAGTCCTGGCAAC.............................................................. 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
....................................TCCAGACACAACCCAGCCCAGAT.............................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................AGCAGCTCAGTCCGAAGTGACAGA.... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TACGCACAGCAGCTCAGTCCGAAGTGAC....... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................CAACAACTTTATCTGACCCACGCACA........................................ 26 0 9 0.89 8 0 0 5 1 0 1 1 0 0 0
.......................................................................................CAACAACTTTATCTGACCCACGCACAGC...................................... 28 0 9 0.89 8 0 1 5 1 1 0 0 0 0 0
........................................................................................AACAACTTTATCTGACCCACGCACAG....................................... 26 0 9 0.78 7 0 2 2 0 3 0 0 0 0 0
........................................................................................AACAACTTTATCTGACCCACGCACA........................................ 25 0 9 0.67 6 1 2 1 0 2 0 0 0 0 0
....................................TCCAGACACAACCCAGCCCAGA............................................................................................... 22 0 20 0.55 11 0 0 11 0 0 0 0 0 0 0
.................................................................TTTGAAGCAGAGGCAGTCCTGGATAT.............................................................. 26 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0
................................................................TTTTGAAGCAGAGGCAGTCCTGAA................................................................. 24 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0
..............................GCAGCCTCCAGACACAACCCAGCCCAGATT............................................................................................. 30 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0
........................................................................................AACAACTTTATCTGACCCACGCA.......................................... 23 0 9 0.44 4 0 1 2 1 0 0 0 0 0 0
........................................................................................AACAACTTTATCTGACCCACGCACAGC...................................... 27 0 9 0.44 4 0 1 2 1 0 0 0 0 0 0
.......................................................................................CAAGAACTTTCTCTGACCC............................................... 19 2 10 0.40 4 0 0 0 0 0 0 1 0 0 0
........................................................................................AACAACTTTATCTGACCCACGC........................................... 22 0 9 0.33 3 0 1 2 0 0 0 0 0 0 0
.................................................CGGCCCAGATGAGTTT........................................................................................ 16 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
................................................................................................TATCTGACCCACGCACAGCAGC................................... 22 0 9 0.33 3 1 1 0 0 0 0 0 0 1 0
......................................................................................................................TACGCACAGCAGCTCA................... 16 0 20 0.30 6 6 0 0 0 0 0 0 0 0 0
........................................................................................AACAACTTTATCTGACCCACGCACAGCAG.................................... 29 0 9 0.22 2 0 0 1 1 0 0 0 0 0 0
................................................................................................TATCTGACCCACGCACAGCA..................................... 20 0 9 0.22 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................CTTTATCTGACCCACGCACAGCAG.................................... 24 0 9 0.22 2 1 0 0 0 0 1 0 0 0 0
....................................................................................TGGCAACAACTTTATCTGACCCACGCACA........................................ 29 0 9 0.22 2 0 1 0 0 1 0 0 0 0 0
........................................................................................AACAACTTTATCTGACCCACGCAT......................................... 24 1 12 0.17 2 0 0 0 2 0 0 0 0 0 0
.......................................AAACACAACCCAGCCCAGATCAGT.......................................................................................... 24 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.........................................ACACAACCCAGCCCAGATC............................................................................................. 19 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
..........................................................TTAGTTTTTTGAAGCTGAG............................................................................ 19 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................TTTATCTGACCCACGCACAG....................................... 20 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
....................................................................................TGGCAACAACTTTATCTGACCCACGC........................................... 26 0 9 0.11 1 0 0 0 0 1 0 0 0 0 0
.......................................................................................CAACAACTTTATCTGACCCACG............................................ 22 0 9 0.11 1 0 0 0 1 0 0 0 0 0 0
........................................................................................AACAACTTTATCTGACTCACGCA.......................................... 23 1 9 0.11 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................CAACAACTTTATCTGACCCACGCACAG....................................... 27 0 9 0.11 1 0 0 1 0 0 0 0 0 0 0
.........................................................................AGAGGCAGTCCTGGCTAAAT............................................................ 20 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................CAACAACTTTATCTGACCCACGCACAGCAG.................................... 30 0 9 0.11 1 0 0 1 0 0 0 0 0 0 0
........................................................................................AACAATTTTATCTGACCCACGCA.......................................... 23 1 9 0.11 1 0 0 1 0 0 0 0 0 0 0
........................................................................................AACAACTTTATCTGACCCA.............................................. 19 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................CTTTATCTGACCCACGCACAGCA..................................... 23 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
....................................................................................TGGCAACAACTTTATCTGACCCACGCAC......................................... 28 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................CAAGAACTTTCTCTGACCCGC............................................. 21 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................GAACAACTTTATCTGACCCACGC........................................... 23 1 9 0.11 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................TAACAACTTTATCTGACCCACGCACAGC...................................... 28 1 9 0.11 1 0 0 1 0 0 0 0 0 0 0
........................................................................................TACAACTTTATCTGACCCACGCAC......................................... 24 1 9 0.11 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................TTTATCTGACCCACGCACAGCAGC................................... 24 0 9 0.11 1 0 0 0 0 0 1 0 0 0 0
...................................................................................CTGGCAACAACTTTATCTGACCCA.............................................. 24 0 9 0.11 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................CTTTATCTGACCCACGCACAGCAGG................................... 25 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
.....TTAAGGCGCTACCGCAAGGGC............................................................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0
........................................................................................AACAACTTTATCTGACACACGCACA........................................ 25 1 10 0.10 1 0 0 1 0 0 0 0 0 0 0
....................................TCCAGACACAACCCAGC.................................................................................................... 17 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0
....ATTAAGGCGCTACCGCAAGG................................................................................................................................. 20 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0
............GCTACCGCAAGGGCGCGCGC......................................................................................................................... 20 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0
...TATTAAGGCGCTACCGCA.................................................................................................................................... 18 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................CAAAAACTTTATCTGACCCACGCACAGC...................................... 28 1 10 0.10 1 0 0 0 0 0 1 0 0 0 0
.......................................................................................CAACAACTTTATCTGACCCACGCAT......................................... 25 1 12 0.08 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................TTTATCTGACCCACGA........................................... 16 1 12 0.08 1 0 0 1 0 0 0 0 0 0 0
...................................................GCCCAGATGCGTTTT....................................................................................... 15 1 16 0.06 1 0 0 1 0 0 0 0 0 0 0
..CTATTAAGGCGCTACCGC..................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
......................................................CAGACGAGTTTTTTGAAGCACAGGC.......................................................................... 25 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0
.........................CGCGCGCAGCCTCCAGACACAACCCAGC.................................................................................................... 28 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0
...................................................GCCCAGATGCGTGTTTTA.................................................................................... 18 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0
....................................................CCCAGACGAGTTTTTTGAAGCAGAGGC.......................................................................... 27 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0
..............................GCAGCCTCCAGACACAACCCAGCCCAGA............................................................................................... 28 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0
.................................................CAGCCCAGACGAGTTTTTTGAAGCAGA............................................................................. 27 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0
................................AGCCTCCACACACAACCCAGCCCAGA............................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0
......................................................GAGACGAGTTTTTTGAAGCAGAGGC.......................................................................... 25 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 chr2h_Mrandom_058:52915-53067 + dsi_27 TCGGTCTGTCA--CTTCGGACTGAGCTGCTGTGCGTAGCTGCTGTGCGTGGGTCAGATAAAGTTGTTGCCAGGACTGCCTCTGCTTCAAAAAACTCATCTGGGCTGGGTTGTGTCTGGAGGCTGCGCGCGCCCTTGCGGTAGCGCCTTAATAGCT
droSec2 scaffold_726:2748-2899 + TTGACCTGTTA--ATAGGAGCTAGCCTGTTTTATG-AGCTGCTGTGCGTAGGTCAGATAAAGTTGTTGCCAGGACTGCCCCTGCTTCAAAAAACTCGTCTGGGCTGGGTTGTGTCTGGAGGCTGCGCGCGCCCTTGCGGTAGCGCCTTAATAGCT
dm3 chrU:1333430-1333581 - TTGACCTGTTA--ATAGGAGCTAGCCTGTTTTATG-AGCTGCTGTGCGTAGGTCAGATAAAGTTGTTGCCAGGACTGCCCCTGCTTGAAAAAACTCGTCTGGGCTGGGTTGTGTCTGGAGGCCGCGCGCGCCCTTGCGGTAGCGCCTTAATAGCT
droEre2 scaffold_4845:72123-72263 + TAGATTTATTG--ATTGGCGCCAATCTATTTTACG-AGCTGCTGTGCGTCGGTCAAGTCAAGCTTCTGTCAGGATTGCGTCT-----ACAAGATTCGTTT-AGCTGGGTTGTTC-----GGCTGCGGTCGCTCCAATGGCAAGGCTTTAATATCG
droYak3 v2_chrUn_2162:1031-1182 - TTGACCTGTTA--ATAGGAGCTAGCCTGTTTTATG-AGCTGCTGTGCGTAGGTCAGATAAAGTTGTTGCCAGGACTGCCACTGCTTCAAAAAACTCGTCTGGGCTGGGTTGTGTCTGGAGGCTGCGCGCGCCCTTGCGGTAGCGCCTTAATAGCT
droBia1 scf7180000301914:16395-16534 + TC--------------GGAGCCAGCCTCTTTTTCG-AGATGTTGTGCGTTGGTCAAATCAAGCTTCCACCTGGATTACCCCTAATTCAAAAGACGCGTCTGGGTTGGGTTGTTTCTGGAGGCTATGGCCTTTTCAATGGCTCGTCTTTAATGTCC
droTak1 scf7180000415228:2317-2458 - TTGACATGCTA--CTTGGTGCTGGCCTATTTTATG-ACCTGTTATGCGTGGGCCAAATTAAGCTGGTTCATGGGTTGCCTCTACTGCAGAAGACTCGTCTTGGCTGGATCGTGACTGGTGGTGGAGATAGGCTTCGCGGCAATAC----------
droEle1 scf7180000489212:6224-6332 - C--------------------------------------TGTTATGCGTGTGCCAAATTAAGCTGGTTCATGGATTGCCTCTAATGCAGAAGACTCGTGTTGGCTGGCTTGTGACTGGTGGCGGAGACAGGCTTCGCGGTA--------ATACCT
droRho1 scf7180000764301:537-678 + TTGACCTGCTC--CTTGGTGCCGGCCTATTTTATG-ACCTGTTATGCGTGGGCCAAATTAAGCTGGTTCATGGATTGCCTCTACTGCAGAAGACTCGCCTTGGCTGGATCGTGACTGGTGGTAGAGATAGACTTCGCGGCAATAC----------
droFic1 scf7180000451451:11540-11687 + TGGATCTTTTG--ATTGGAGCCAGTTTGTTTTACG-AGCTG-TGTGCGTTGGACAAATTAAGCTCGCACCAGGATTACCGCTTATTCAAAAGACTCGACTGGGATGGGTTGTTTCCGGAGGATATGGCGTCTC---CAATGGCTCTTCATTAATC
droAna3 scaffold_13045:374212-374362 - TTGATTTTCTA--ATTGGAGCTGAATTATTTTACG-AGCTGCTTTGTGTGGGGCACATTTATCTGTCTCCTGGTTTGCCCTCCATCCAAAAAACTCGGCTCGGTTGGATTGTTTGTGGAGGCGGAGGCCCTGACGATGGTAAGGTCCTAATGGC-
droBip1 scf7180000393868:14195-14316 + TCGATCTTCTC--ATCGGAG----TCTGTTCTATG-GGCTGCTGTGTGTTTGGCAAATTAAGCTCTCAGCCGGCCTGCCATTGCTGCAGAAAACCCAACTGGGATGGGTCGTGTGTGGAGGCGGTTCAC--------------------------
dp5 Unknown_singleton_2366:786-937 - TCGATCTGCTA--ATTGGCGCAAGTCTGTTTTTCG-AGCTGCTGTGTGTTGGTCAGGTCAAGCTACTGCCAGGATTGCCTTCAATTCAGAAAACGCGCTTGGGATGGGTCGTGTCTGGAAGTTGTTCGCGTTTAAAAGGTTCCTCGTTGATGGTC
droPer2 scaffold_115:41271-41422 - TCGATCTGCTA--ATTGGCGCAAATCTGTTTTTCG-AGCTCCTGTGTGTTGGTCAGGTCAAGCTACTGCCAGGATTGCCTTTAATTCAGAAAACGCGCTTGGGATGGGTCGTGTCTGGAGGTTGTTCGCGTTTAAAAGGTTCCTCGTTAATGGTC
droVir3 scaffold_12958:2152871-2153022 + TGGACCTCTTA--ATTGGAGCGAGCCTTTTCTATG-AGCTTTTGTCTGTTGGGTAAATTGTGCTTTTGCCAGGACTACCTCTTCTGCAAAAAACTCATCTTGGCTGGGTGGTGACCGGTGGATTTGAGAGACCGCGCAGTACCTCGTTGTTGGCT
droMoj3 scaffold_1874:5347-5500 - TCACTCTTCAAGCTTCGGAGCTAGCCTGTTTTATG-ATTGGCTCTGTGTGGGACAAATCAAGTTGATGCCTGGATTTCCATTGTTACAGAAGACTCGTTTTGGTTGGGTTGTATCAGGTGGCTAGGCTCGCAACCACAACTCCGTGCTAATAGCT
droGri2 scaffold_15101:128706-128787 + T---------------------------------------GCTGTGCGTTGGTCAGATCAAGCTCGTGCCTGGACTACCATTGTTACAAAAGACTCGTCTTGGTTGGGTAGTCACAGGTGG----------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
TCGGTCTGTCA--CTTCGGACTGAGCTGCTGTGCGTAGCTGCTGTGCGTGGGTCAGATAAAGTTGTTGCCAGGACTGCCTCTGCTTCAAAAAACTCATCTGGGCTGGGTTGTGTCTGGAGGCTGCGCGCGCCCTTGCGGTAGCGCCTTAATAGCTSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
.........................................................TAAAGTTGTTGCCAGGACTGCCTC..........................................................................241430.004301001000160113481196
......TGTCA--CTTCGGACTGAGCTGCTGTGC.........................................................................................................................261361.00361000000168119546059
..........................................................AAAGTTGTTGCCAGGACTGCCTCTGC.......................................................................261206.00206000000071419472
......TGTCA--CTTCGGACTGAGCTGCTGTG..........................................................................................................................251165.0016510030031531344533
TCGGTCTGTCA--CTTCGGACTGAGC.................................................................................................................................241164.0016400050090152142
.........................................................TAAAGTTGTTGCCAGGACTGCCTCTGC.......................................................................271148.00148000000054512986
..........................................................AAAGTTGTTGCCAGGACTGCCTCT.........................................................................241131.0013100000004655570
.........................................................TAAAGTTGTTGCCAGGACTGCCT...........................................................................231122.001220004000294619618
..........................................................AAAGTTGTTGCCAGGACTGCCTC..........................................................................231105.0010500000003595335
.........................................................TAAAGTTGTTGCCAGGACTGCCTCT.........................................................................25192.0092000000027283025
......TGTCA--CTTCGGACTGAGCTGCTGT...........................................................................................................................24182.00821000002714142816
..........................................................AAAGTTGTTGCCAGGACTGCCT...........................................................................22159.005900010002344171
..........................................................AAAGTTGTTGCCAGGACTGCCTCTG........................................................................25152.005200000002262211
....................................................TCAGATAAAGTTGTTGCCAGGAC................................................................................232050.25100500123206700030000
....TCTGTCA--CTTCGGACTGAGCTGC..............................................................................................................................23144.004400000018710153
......TGTCA--CTTCGGACTGAGCTGCTG............................................................................................................................23141.00410002002495109
......TGTCA--CTTCGGACTGAGCTGCTGTGCG........................................................................................................................27141.004100000044127113
....TCTGTCA--CTTCGGACTGAGCTGCTG............................................................................................................................25138.00380001001916371
......TGTCA--CTTCGGACTGAGCTGCTGTGCGT.......................................................................................................................28131.00310000001651162
.CGGTCTGTCA--CTTCGGACTGAGCTGC..............................................................................................................................26130.00300000001337106
......TGTCA--CTTCGGACTGAGCTGC..............................................................................................................................21126.0026000100057346
.............................................................................................................TGTGTCTGGAGGCTGCGCGCGCCCT.....................252024.1548330000002803605384
TCGGTCTGTCA--CTTCGGACTGAGCTGC..............................................................................................................................27124.00240000001050216
..............TTCGGACTGAGCTGCTGTGCGTAGCTGC.................................................................................................................28124.00240003000713100
....TCTGTCA--CTTCGGACTGAGCTGCTGTG..........................................................................................................................27122.00220000000412510
..............TTCGGACTGAGCTGCTGTGCGTAGC....................................................................................................................25122.0022000000097420
....................................................TCAGATAAAGTTGTTGCCAGGACTGCCT...........................................................................28121.00210041300110011
......TGTCA--CTTCGGACTGAGCTGCTGTGCGTAG.....................................................................................................................30119.00190000000412210
....................................................TCAGATAAAGTTGTTGCCAGGACT...............................................................................242018.10362116033501900000
......TGTCA--CTTCGGACTGAGCTGCT.............................................................................................................................22118.00180002000001105
.....CTGTCA--CTTCGGACTGAGCTGCTGTGC.........................................................................................................................27116.0016000000028321
..........................TGCTGTGCGTAGCTGCTGTGCGTG.........................................................................................................24116.0016000000002905
....TCTGTCA--CTTCGGACTGAGCTGCTGT...........................................................................................................................26116.0016000200157010
...................................................................................................................TGGAGGCTGCGCGCGCCCTTGCGGTA..............262015.7031410000011381630011
.........................................................TAAAGTTGTTGCCAGGACTGCCTCTG........................................................................26115.0015000000034530
...............................TGCGTAGCTGCTGTGCGTGGGTCAGA..................................................................................................26114.0014000100041242
.............................TGTGCGTAGCTGCTGTGCGTGGGTCAGA..................................................................................................28114.0014000000075110
...............................................................................TCTGCTTCAAAAAACTCATCTGGGC...................................................25114.0014300900200000
....TCTGTCA--CTTCGGACTGAGCTGCT.............................................................................................................................24113.0013000300010180
...GTCTGTCA--CTTCGGACTGAGC.................................................................................................................................21113.00130000000000013
..GGTCTGTCA--CTTCGGACTGAGC.................................................................................................................................22112.00120000000000012
..GGTCTGTCA--CTTCGGACTGAGCTGC..............................................................................................................................25111.0011100000002008
........................................................ATAAAGTTGTTGCCAGGACTGCCTC..........................................................................25111.0011000000061004
..............TTCGGACTGAGCTGCTGTGCGTAGCT...................................................................................................................26110.0010000000033400
..............TTCGGACTGAGCTGCTGTGCGTAGCTG..................................................................................................................27110.0010000000022420
...............................................................TGTTGCCAGGACTGCCTCTGCTT.....................................................................23110.0010000000030700
...............................................................................TCTGCTTCAAAAAACTCATCTGGG....................................................24110.0010000900100000
....................................................TCAGATAAAGTTGTTGCCAGGACTGCCTC..........................................................................29110.0010001500011200
.............................................................................................................TGTGTCTGGAGGCTGCGCGCGCCC......................24208.60172000280037000134
.......................................TGCTGTGCGTGGGTCAGATAAAGTT...........................................................................................2598.337500000001933959
.................................................GGGTCAGATAAAGTTGTTGCCAGGA.................................................................................2598.117300000004312801
....TCTGTCA--CTTCGGACTGAGCTGCTGTGC.........................................................................................................................2818.008000000035000
........................................................ATAAAGTTGTTGCCAGGACTGCCT...........................................................................2418.008000000002132
.........................................................TAAAGTTGTTGCCAGGAC................................................................................18207.5015000007575000000
...............TCGGACTGAGCTGCTGTGCGTAGCTGC.................................................................................................................2717.007000000014200
....TCTGTCA--CTTCGGACTGAGC.................................................................................................................................2017.007000000000043
.......................................TGCTGTGCGTGGGTCAGATAAAGT............................................................................................2496.1155100000010322514
..................................................................TGCCAGGACTGCCTCTGCTTCAAAAAAC.............................................................2816.006000000021210
...............................................................TGTTGCCAGGACTGCCTCTGCTTC....................................................................2416.006000200001300
...GTCTGTCA--CTTCGGACTGAGCTGC..............................................................................................................................2416.006000000001005
.........CA--CTTCGGACTGAGCTGCTGTGCG........................................................................................................................2416.006000000003120
.........CA--CTTCGGACTGAGCTGCTGTGCGT.......................................................................................................................2516.006000000001212
.........CA--CTTCGGACTGAGCTGCTGTGCGTAGC....................................................................................................................2815.005000000004010
.....CTGTCA--CTTCGGACTGAGCTGC..............................................................................................................................2215.005000000012011
.............................TGTGCGTAGCTGCTGTGCGTGGG.......................................................................................................2315.005000000001022
.............................TGTGCGTAGCTGCTGTGCGTGGGTC.....................................................................................................2515.005000000010202
.............................TGTGCGTAGCTGCTGTGCGTGG........................................................................................................2215.005100000001003
......TGTCA--CTTCGGACTGAGC.................................................................................................................................1815.005000000000005
........................................................ATAAAGTTGTTGCCAGGACTGCCTCTGC.......................................................................2815.005000000041000
..................................................................TGCCAGGACTGCCTCTGCTTCAAAAAA..............................................................2715.005000000021200
..........................................TGTGCGTGGGTCAGATAAAGTTGT.........................................................................................2494.11371000000636120
.................................................................TTGCCAGGACTGCCTCTGCTTCAAA.................................................................2514.004000000000220
.............................TGTGCGTAGCTGCTGTGCGTGGGT......................................................................................................2414.004000000002011
.............................TGTGCGTAGCTGCTGTGCGTG.........................................................................................................2114.004000000001003
..........................................................AAAGTTGTTGCCAGGACTGCCTCTGCT......................................................................2714.004000000103000
..........................TGCTGTGCGTAGCTGCTGTGCGTGG........................................................................................................2514.004000000010102
...................................................................................................TGGGCTGGGTTGTGTCTGGAGGCTG...............................25204.00800000000007505
..............TTCGGACTGAGCTGCTGTGCGTAG.....................................................................................................................2414.004000000001120
...................................TAGCTGCTGTGCGTGGGTCAGA..................................................................................................2214.004000000000103
.................................................................................TGCTTCAAAAAACTCATCTGGGCTGG................................................2614.004000000200101
......TGTCA--CTTCGGACTGAGCT................................................................................................................................1914.004000000003100
..............................................................................................TCATCTGGGCTGGGTTGTGTCTGGA....................................2514.004000100000003
....................................................................................TTCAAAAAACTCATCTGGGCTGGGT..............................................2514.004000000102001
.................................................GGGTCAGATAAAGTTGTTGCCAG...................................................................................2393.89350000990000017
...................................................................................................TGGGCTGGGTTGTGTCTGGAGGCTGC..............................26203.807600000013531009
....................................................TCAGATAAAGTTGTTGCCAGGACTGCC............................................................................27203.40680020610401000
...................................TAGCTGCTGTGCGTGGGTCAG...................................................................................................2113.003000000001002
............................................................................................................TTGTGTCTGGAGGCTGCGCGCGCCC......................25203.00600000001600053
..........................................................AAAGTTGTTGCCAGGACTGCCTCTGCTT.....................................................................2813.003000000012000
..........A--CTTCGGACTGAGCTGCTGTGCG........................................................................................................................2313.003000000001200
.....CTGTCA--CTTCGGACTGAGCTGCTGTG..........................................................................................................................2613.003000000011010
.........CA--CTTCGGACTGAGCTGCTGTGCGTAG.....................................................................................................................2713.003000000000210
.........CA--CTTCGGACTGAGCTGCTGTGCGTA......................................................................................................................2613.003000000010200
.............................TGTGCGTAGCTGCTGTGCGTGGGTCA....................................................................................................2613.003000000003000
...................................TAGCTGCTGTGCGTGGG.......................................................................................................1713.003000000000003
..........................TGCTGTGCGTAGCTGCTGTGCGT..........................................................................................................2313.003000000000003
........TCA--CTTCGGACTGAGCTGCTGTGCG........................................................................................................................2513.003000000001011
TCGGTCTGTCA--CTTCGGACTGAG..................................................................................................................................2313.003000000000102
......TGTCA--CTTCGGACTGAGCTG...............................................................................................................................2013.003000000001011
................................................TGGGTCAGATAAAGTTGTTGCCAGGAC................................................................................2792.33210000000521040
.............................................................................................................TGTGTCTGGAGGCTGCGCGCGCCCTT....................26202.304600000000111034
..........................................TGTGCGTGGGTCAGATAAAGTTGTT........................................................................................2592.22200000000521111
.............................TGTGCGTAGCTGCTGTGCGTGGGTCAGAT.................................................................................................2912.002000000002000
...................................TAGCTGCTGTGCGTGGGTCAGATAAAGT............................................................................................2812.002000000000200
..........A--CTTCGGACTGAGCTGCTGTGCGTAGC....................................................................................................................2712.002000000001100
................................................................................................ATCTGGGCTGGGTTGTGTCTGGA....................................2312.002000000000002
..................................................................TGCCAGGACTGCCTCTGCTTCAAAAAACTC...........................................................3012.002000000002000
...........................................................AAGTTGTTGCCAGGACTGCCTCTGC.......................................................................2512.002000000011000
..........................................................................................AAACTCATCTGGGCTGGGTTGTGTC........................................2512.002000000000002
...............TCGGACTGAGCTGCTGTGCGTAGCT...................................................................................................................2512.002000000020000
.........................................................TAAAGTTGTTGCCAGGACTGCCTCTGCT......................................................................2812.002000000001001
.......................................................GATAAAGTTGTTGCCAGGACTGCCT...........................................................................2512.002000000000002
.CGGTCTGTCA--CTTCGGACTGAGC.................................................................................................................................2312.002000000100001
...............TCGGACTGAGCTGCTGTGCGTAGC....................................................................................................................2412.002000000011000
...............TCGGACTGAGCTGCTGTGCGTAGCTG..................................................................................................................2612.002000000011000
..GGTCTGTCA--CTTCGGACTGAGCTG...............................................................................................................................2412.002000000000002
....TCTGTCA--CTTCGGACTGAGCTGCTGTGCG........................................................................................................................2912.002000000020000
..............TTCGGACTGAGCTGCTGTGCGTA......................................................................................................................2312.002000000011000
....TCTGTCA--CTTCGGACTGAGCT................................................................................................................................2112.002000000000200
......................................................................AGGACTGCCTCTGCTTCAAAAAACTC...........................................................2612.002000000011000
..................GACTGAGCTGCTGTG..........................................................................................................................1512.002000000000002
......TGTCA--CTTCGGACTGAG..................................................................................................................................1712.002000000000011
...............................TGCGTAGCTGCTGTGCGTGGGTCA....................................................................................................2412.002000000000020
.................................................................................TGCTTCAAAAAACTCATCTGGGC...................................................2312.002000000100001
...............................................................TGTTGCCAGGACTGCCTC..........................................................................1812.002000000000002
.............CTTCGGACTGAGCTGCTGTGC.........................................................................................................................2112.002000000001001
......TGTCA--CTTCGGACTGAGCTGCTGTGCGTA......................................................................................................................2912.002000000002000
..........................................TGTGCGTGGGTCAGATAAAGTTGTTG.......................................................................................2691.89170000000101240
........................................................................................................TGGGTTGTGTCTGGAGGCTGCGCGC..........................25201.80360000000000036
.........................................................TAAAGTTGTTGCCAGGACT...............................................................................19201.75350000000000134
...................................................................................................TGGGCTGGGTTGTGTCTGGAGGCT................................24201.75350000000003500
....................................................TCAGATAAAGTTGTTGCCAGGACTGC.............................................................................26201.703400000014002018
............................................TGCGTGGGTCAGATAAAGTTGTTGC......................................................................................2591.6715000000043512
..........................................TGTGCGTGGGTCAGATAAAGTTGTTGC......................................................................................2791.67150000000211020
...................................................................................................TGGGCTGGGTTGTGTCTGGAGGC.................................23201.60320000001561730
...............................................................................................................TGTCTGGAGGCTGCGCGCGCCCT.....................23201.45291000000000028
.......................................TGCTGTGCGTGGGTCAGATAAAGTTG..........................................................................................2691.4413000009100300
........................................................................................................TGGGTTGTGTCTGGAGGCTGCGCGCGCC.......................28201.35270000001129005
...................................................................................................................TGGAGGCTGCGCGCGCCCTTGCGG................24201.2525000000486700
.............................................................................................................TGTGTCTGGAGGCTGCGCGCGCC.......................23201.25253000001417000
.................................................GGGTCAGATAAAGTTGTTGCCAGG..................................................................................2491.2211000000030602
................................................................................................................GTCTGGAGGCTGCGCGCGCCCT.....................22201.15230000000000023
.............................................................................................................TGTGTCTGGAGGCTGCGCGCGC........................22201.15230000000000023
.......................................TGCTGTGCGTGGGTCAGATAAAGTTGT.........................................................................................2791.1110100000040302
.............................TGTGCGTAGCTGCTGTGC............................................................................................................1811.001000000000001
.....CTGTCA--CTTCGGACTGAGCTGCT.............................................................................................................................2311.001000000000010
.....................TGAGCTGCTGTGCGTAGCTGCTGTGC............................................................................................................2611.001000000000001
.............................TGTGCGTAGCTGCTGTGCGTGGGTCAG...................................................................................................2711.001000000100000
....................................................................CCAGGACTGCCTCTGC.......................................................................1611.001000000010000
...................ACTGAGCTGCTGTGCGTAGCTGC.................................................................................................................2311.001000000000001
.................................CGTAGCTGCTGTGCGTGGGTCAGATA................................................................................................2611.001000000001000
...............................TGCGTAGCTGCTGTGCGTGGGTCAGAT.................................................................................................2711.001000000001000
................CGGACTGAGCTGCTGTGCGTAGC....................................................................................................................2311.001000000010000
.......GTCA--CTTCGGACTGAGCTGCTGTGC.........................................................................................................................2511.001000000100000
.........CA--CTTCGGACTGAGCTGCTGTGC.........................................................................................................................2311.001000000000001
....TCTGTCA--CTTCGGACTGAGCTG...............................................................................................................................2211.001000000000010
.CGGTCTGTCA--CTTCGGACTGAGCTG...............................................................................................................................2511.001000000000100
.......................................................................................AAAAAACTCATCTGGGCTGGGTT.............................................2311.001000000000001
..................................................................TGCCAGGACTGCCTCTGCTTCAAA.................................................................2411.001000000000100
.....CTGTCA--CTTCGGACTGAGC.................................................................................................................................1911.001000000000010
...............................................................TGTTGCCAGGACTGCCTCTGC.......................................................................2111.001000000010000
......TGTCA--CTTCGGACTG....................................................................................................................................1511.001000000000001
....................................................................................TTCAAAAAACTCATCTGGGCTGGGTTG............................................2711.001000000000001
................................................................GTTGCCAGGACTGCCTCTGCTT.....................................................................2211.001000000000100
....TCTGTCA--CTTCGGACTGAG..................................................................................................................................1911.001000000001000
...............TCGGACTGAGCTGCTGTGCGTA......................................................................................................................2211.001000000001000
TCGGTCTGTCA--CTTCGGACTGAGCTG...............................................................................................................................2611.001000000100000
............................................................AGTTGTTGCCAGGACTGCCTCTG........................................................................2311.001000000010000
...................ACTGAGCTGCTGTGCGTAGCTGCTGT..............................................................................................................2611.001000000000001
...................................................................GCCAGGACTGCCTCTGCTTCAAAAAAC.............................................................2711.001000000010000
.....CTGTCA--CTTCGGACTGAGCTGCTGT...........................................................................................................................2511.001000000001000
...........................................................................TGCCTCTGCTTCAAAAAACTCATCTGGG....................................................2811.001000000100000
....TCTGTCA--CTTCGGACTGA...................................................................................................................................1811.001000000000001
..................................GTAGCTGCTGTGCGTGGGTCAG...................................................................................................2211.001000100000000
...........................................................................TGCCTCTGCTTCAAAAAACTCATCTGGGC...................................................2911.001000000100000
..GGTCTGTCA--CTTCGGACTG....................................................................................................................................1911.001000000000001
...............................TGCGTAGCTGCTGTGCGTGGGTCAGATA................................................................................................2811.001000000010000
...............................TGCGTAGCTGCTGTGCGTGGGT......................................................................................................2211.001000000000010
...............................................................TGTTGCCAGGACTGCCTCT.........................................................................1911.001000100000000
...........................................................................................AACTCATCTGGGCTGGGTTGTGT.........................................2311.001000000000001
...................................TAGCTGCTGTGCGTGG........................................................................................................1611.001000000000001
.................................................................TTGCCAGGACTGCCTCTGCTTCAAAA................................................................2611.001000000100000
................CGGACTGAGCTGCTGTGCGTAGCTGC.................................................................................................................2611.001000000001000
........TCA--CTTCGGACTGAGCTGCTGTGCGTA......................................................................................................................2711.001000000010000
..........A--CTTCGGACTGAGCTGCTGTGCGTAGCTG..................................................................................................................2911.001000000001000
.......................................................GATAAAGTTGTTGCCAGGACTGCCTC..........................................................................2611.001000000010000
...............................................................TGTTGCCAGGACTGCCT...........................................................................1711.001000000000001
.................................................................................TGCTTCAAAAAACTCATCTGGGCTGGG...............................................2711.001000000100000
..........A--CTTCGGACTGAGCTGC..............................................................................................................................1711.001000000000001
....................................................................................TTCAAAAAACTCATCTGGGCTGGGTT.............................................2611.001000000000001
..........A--CTTCGGACTGAGCTGCTGTGCGT.......................................................................................................................2411.001000000000010
......TGTCA--CTTCGGACTGAGCTGCTGTGCGTAGC....................................................................................................................3111.001000000010000
.........................................................TAAAGTTGTTGCCAGGACTGCCTCTGCTTCAA..................................................................3211.001000000010000
..............TTCGGACTGAGCTGCTGTGCGT.......................................................................................................................2211.001000000000010
..................................................................TGCCAGGACTGCCTCTGCTTCAAAA................................................................2511.001000000000100
.....CTGTCA--CTTCGGACTGAGCTGCTG............................................................................................................................2411.001000000000010
..........A--CTTCGGACTGAGCTGCT.............................................................................................................................1811.001000000000001
..................................................................TGCCAGGACTGCCTCTGCTTCAA..................................................................2311.001000000010000
..................................................................TGCCAGGACTGCCTCTGCTTCAAAAA...............................................................2611.001000000000100
...........................GCTGTGCGTAGCTGCTG...............................................................................................................1711.001000000000001
................................................................................................ATCTGGGCTGGGTTGTGTCTGGAG...................................2411.001000000000001
.........................................................TAAAGTTGTTGCCAGGACTGCCTCTGCTTC....................................................................3011.001000000010000
.................................................................................TGCTTCAAAAAACTCATCTGGGCTGGGT..............................................2811.001000100000000
................................................................GTTGCCAGGACTGCCTC..........................................................................1711.001000000000001
....TCTGTCA--CTTCGGACTGAGCTGCTGTGCGT.......................................................................................................................3011.001000000001000
...............................................................................TCTGCTTCAAAAAACTCATCTGGGCT..................................................2611.001000000100000
..............................................................TTGTTGCCAGGACTGCCTCTGCT......................................................................2311.001000000001000
......................................................AGATAAAGTTGTTGCCAGGACTGCCTC..........................................................................2711.001000000000100
.........................................................TAAAGTTGTTGCCAGGACTGCCTCTGCTT.....................................................................2911.001000000001000
.....................................................................................TCAAAAAACTCATCTGGGCTGGGTTG............................................2611.001000000001000
...........................................................................................AACTCATCTGGGCTGGGTTGTGTCTGGA....................................2811.001000000010000
..........................................................AAAGTTGTTGCCAGGACTGCCTCTGCTTC....................................................................2911.001000000001000
.................................................................TTGCCAGGACTGCCTCTGCTT.....................................................................2111.001000000001000
........TCA--CTTCGGACTGAGCTGCTGT...........................................................................................................................2211.001000000000001
..................................GTAGCTGCTGTGCGTGG........................................................................................................1711.001000000000001
droSec2
TTGACCTGTTA--ATAGGAGCTAGCCTGTTTTATG-AGCTGCTGTGCGTAGGTCAGATAAAGTTGTTGCCAGGACTGCCCCTGCTTCAAAAAACTCGTCTGGGCTGGGTTGTGTCTGGAGGCTGCGCGCGCCCTTGCGGTAGCGCCTTAATAGCTSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
....................................................TCAGATAAAGTTGTTGCCAGGACT...............................................................................24206.10122003119
....................................................TCAGATAAAGTTGTTGCCAGGACTG..............................................................................25202.254503870
....CCTGTTA--ATAGGAGCTAGCCTGT..............................................................................................................................23201.7535017117
....................................................TCAGATAAAGTTGTTGCCAGGACTGC.............................................................................26201.703400034
.................................................................................TGCTTCAAAAAACTCGTCTGGGC...................................................23201.503003000
..........................TGTTTTATG-AGCTGCTGTGCGTAGG.......................................................................................................25201.352740023
.................................................................................TGCTTCAAAAAACTCGTCTGGGCTGGG...............................................27201.152302021
....CCTGTTA--ATAGGAGCTAGCCTG...............................................................................................................................22200.751503012
.............................................................................................................TGTGTCTGGAGGCTGCGCGCGCCC......................24200.601201200
...............................................................................CCTGCTTCAAAAAACTCGTCTGGGC...................................................25200.55110803
.............................................................................................................TGTGTCTGGAGGCTGCGCGCGCC.......................23200.4080503
............................................................................................................TTGTGTCTGGAGGCTGCGCGCGCCC......................25200.3060204
...........................................................................TGCCCCTGCTTCAAAAAACTCGTCTGG.....................................................27200.3060204
............................................................................................................TTGTGTCTGGAGGCTGCGCGCGC........................23200.3060204
.....................................................CAGATAAAGTTGTTGCCAGGACT...............................................................................23200.2550005
..............................................................................................................GTGTCTGGAGGCTGCGCGCGCCCT.....................24200.2040004
.............................................................................................................TGTGTCTGGAGGCTGCGCGCGC........................22200.2040013
.................................................................................................................TCTGGAGGCTGCGCGCGCCCTTGC..................24200.1530003
..........................TGTTTTATG-AGCTGCTGTGCGT..........................................................................................................22200.1530003
..........................TGTTTTATG-AGCTGCTGTGCGTAG........................................................................................................24200.1022000
....................................................................................TTCAAAAAACTCGTCTGGGCTGGGTTG............................................27200.1020002
............................................................................................................TTGTGTCTGGAGGCTGCGCGC..........................21200.1020101
....CCTGTTA--ATAGGAGCTAGCCTGTTT............................................................................................................................25200.1020200
..................................................................................GCTTCAAAAAACTCGTCTGGGC...................................................22200.1020002
..............................................................................................................GTGTCTGGAGGCTGCGCGCGCCC......................23200.1020002
............................................TGCGTAGGTCAGATAAAGTTGTTGCC.....................................................................................26200.1020002
........................................................................................................TGGGTTGTGTCTGGAGGCTGCGCGC..........................25200.1020101
.............................TTTATG-AGCTGCTGTGCGTAG........................................................................................................21200.1021100
........................................................................................................TGGGTTGTGTCTGGAGGCTGCGCGCGC........................27200.1020110
....................................................TCAGATAAAGTTGTTGCCAG...................................................................................20200.1020200
....................................................................................TTCAAAAAACTCGTCTGGGCTGG................................................23200.1020200
.............................TTTATG-AGCTGCTGTGCGTA.........................................................................................................20200.0510100
......................................................................................CAAAAAACTCGTCTGGGCTGGGTTG............................................25200.0510001
.....................................................................................TCAAAAAACTCGTCTGGGCTGGGT..............................................24200.0510100
...........................................................................TGCCCCTGCTTCAAAAAACTCGTCTGGG....................................................28200.0510001
.....................................................................................................GGCTGGGTTGTGTCTGGAGGCTG...............................23200.0510001
.................................TG-AGCTGCTGTGCGTAGG.......................................................................................................18200.0510001
..................................................................................GCTTCAAAAAACTCGTCTGGGCT..................................................23200.0510001
............................................................................................................TTGTGTCTGGAGGCTGCGCG...........................20200.0510100
..........................TGTTTTATG-AGCTGCTGTGC............................................................................................................20200.0510100
..GACCTGTTA--ATAGGAGCTAGCC.................................................................................................................................22200.0510001
...............................................................................CCTGCTTCAAAAAACTCGTCTGGG....................................................24200.0510001
....CCTGTTA--ATAGGAGCTAGCCT................................................................................................................................21200.0510001
...................................................................................CTTCAAAAAACTCGTCTGGGC...................................................21200.0511000
.................................................................................................TCTGGGCTGGGTTGTGTCTGGAG...................................23200.0510010
...........................................GTGCGTAGGTCAGATAAAGTT...........................................................................................21200.0510100
.................................................................................................TCTGGGCTGGGTTGTGTCTGGAGGC.................................25200.0510001
.....CTGTTA--ATAGGAGCTAGCCTGTT.............................................................................................................................23200.0510001
...........................................................................TGCCCCTGCTTCAAAAAACTCGTC........................................................24200.0510001
.......................................TGCTGTGCGTAGGTCAGATAAAGT............................................................................................24200.0510001
.........TA--ATAGGAGCTAGCCTGTTTTATG-AGC....................................................................................................................27200.0510001
.........................................................TAAAGTTGTTGCCAGGACTGCCCCTG........................................................................26200.0510100
.....................................................................................................GGCTGGGTTGTGTCTGGAGGCTGC..............................24200.0510001
.................................TG-AGCTGCTGTGCGTAGGTCAGATA................................................................................................25200.0510001
............................................................................................................TTGTGTCTGGAGGCTGCGCGCGCCCT.....................26200.0510010
........................................................................................................TGGGTTGTGTCTGGAGGCTGCGCG...........................24200.0510001
..............................TTATG-AGCTGCTGTGCGTAGGTCAGA..................................................................................................26200.0510100
.................................................................................................................TCTGGAGGCTGCGCGCGCCCTTGCG.................25200.0510001
............................................................................................ACTCGTCTGGGCTGGGTTGTGTC........................................23200.0510001
......................................................AGATAAAGTTGTTGCCAGGAC................................................................................21200.0510100
.................................................................................................................TCTGGAGGCTGCGCGCGCC.......................19200.0510001
...................................................................................CTTCAAAAAACTCGTCTGGGCTG.................................................23200.0510001
.................................................................................................TCTGGGCTGGGTTGTGTCTG......................................20200.0510010
................................................................................CTGCTTCAAAAAACTCGTCTGGGCTG.................................................26200.0510001
....................................................TCAGATAAAGTTGTTGCCAGGACTGCC............................................................................27200.0510010
....CCTGTTA--ATAGGAGCTAGCCTGTTTTA..........................................................................................................................27200.0510010
................................ATG-AGCTGCTGTGCGTAGG.......................................................................................................19200.0510100
....................................................TCAGATAAAGTTGTTGCCA....................................................................................19200.0510001
droEre2
TAGATTTATTG--ATTGGCGCCAATCTATTTTACG-AGCTGCTGTGCGTCGGTCAAGTCAAGCTTCTGTCAGGATTGCGTCT-----ACAAGATTCGTTT-AGCTGGGTTGTTC-----GGCTGCGGTCGCTCCAATGGCAAGGCTTTAATATCGSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
.........................................................TCAAGCTTCTGTCAGGATTGCGTC..........................................................................2420.501000010
droYak3
TTGACCTGTTA--ATAGGAGCTAGCCTGTTTTATG-AGCTGCTGTGCGTAGGTCAGATAAAGTTGTTGCCAGGACTGCCACTGCTTCAAAAAACTCGTCTGGGCTGGGTTGTGTCTGGAGGCTGCGCGCGCCCTTGCGGTAGCGCCTTAATAGCTSizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
..GACCTGTTA--ATAGGAGCTAGCCTG...............................................................................................................................24200.3060000060
..........................TGTTTTATG-AGCTGCTGTGCGTAGGTC.....................................................................................................27200.3060000060
.........TA--ATAGGAGCTAGCCTGTTTTATG-AGC....................................................................................................................27200.2550000050
...............................................................................................................TGTCTGGAGGCTGCGCGCGCCCTTG...................25200.2040000040
.............................................................................................................TGTGTCTGGAGGCTGCGCGCGC........................22200.1530000021
.....................................................................................TCAAAAAACTCGTCTGGGCTGG................................................22200.1020000020
....................................................TCAGATAAAGTTGTTGCCAGGACT...............................................................................24200.1020000020
........................................................................................................TGGGTTGTGTCTGGAGGCTGCGCGCG.........................26200.0510000010
............................................................................................................TTGTGTCTGGAGGCTGCGCGCGCC.......................24200.0510000001
...................................................................GCCAGGACTGCCACTGCT......................................................................18200.0510000010
............................................TGCGTAGGTCAGATAAAGTTGTTGCCAG...................................................................................28200.0510010000
..........................................................AAAGTTGTTGCCAGGACTGCCACT.........................................................................24200.0510000010
....................................................................................................................GGAGGCTGCGCGCGCCCTTGCGGT...............24200.0510000010
...................................................................................................TGGGCTGGGTTGTGTCTGGAG...................................21200.0510000010
..................................................................................GCTTCAAAAAACTCGTCTGGGCTG.................................................24200.0510000010
.............................................................................................................TGTGTCTGGAGGCTGCGCGCGCCCT.....................25200.0511000000
.........................CTGTTTTATG-AGCTGCTGTGCGTAGG.......................................................................................................26200.0510000010
...........................................................................................................GTTGTGTCTGGAGGCTGCGCGCGCCC......................26200.0510000010
..................................................................................................CTGGGCTGGGTTGTGTCTGGAGG..................................23200.0510000010
..............................................................................................................GTGTCTGGAGGCTGCGCGCGCCCT.....................24200.0510000010
....................................................................................TTCAAAAAACTCGTCTGGGCT..................................................21200.0510000001
..................................................................TGCCAGGACTGCCACTGC.......................................................................18200.0510000001
droBia1
TC--------------GGAGCCAGCCTCTTTTTCG-AGATGTTGTGCGTTGGTCAAATCAAGCTTCCACCTGGATTACCCCTAATTCAAAAGACGCGTCTGGGTTGGGTTGTTTCTGGAGGCTATGGCCTTTTCAATGGCTCGTCTTTAATGTCCSizeHit CountTotal NormTotal
No Reads
droTak1
TTGACATGCTA--CTTGGTGCTGGCCTATTTTATG-ACCTGTTATGCGTGGGCCAAATTAAGCTGGTTCATGGGTTGCCTCTACTGCAGAAGACTCGTCTTGGCTGGATCGTGACTGGTGGTGGAGATAGGCTTCGCGGCAATAC----------SizeHit CountTotal NormTotal
No Reads
droEle1
C--------------------------------------TGTTATGCGTGTGCCAAATTAAGCTGGTTCATGGATTGCCTCTAATGCAGAAGACTCGTGTTGGCTGGCTTGTGACTGGTGGCGGAGACAGGCTTCGCGGTA--------ATACCTSizeHit CountTotal NormTotal
No Reads
droRho1
TTGACCTGCTC--CTTGGTGCCGGCCTATTTTATG-ACCTGTTATGCGTGGGCCAAATTAAGCTGGTTCATGGATTGCCTCTACTGCAGAAGACTCGCCTTGGCTGGATCGTGACTGGTGGTAGAGATAGACTTCGCGGCAATAC----------SizeHit CountTotal NormTotal
No Reads
droFic1
TGGATCTTTTG--ATTGGAGCCAGTTTGTTTTACG-AGCTG-TGTGCGTTGGACAAATTAAGCTCGCACCAGGATTACCGCTTATTCAAAAGACTCGACTGGGATGGGTTGTTTCCGGAGGATATGGCGTCTC---CAATGGCTCTTCATTAATCSizeHit CountTotal NormTotal
No Reads
droAna3
TTGATTTTCTA--ATTGGAGCTGAATTATTTTACG-AGCTGCTTTGTGTGGGGCACATTTATCTGTCTCCTGGTTTGCCCTCCATCCAAAAAACTCGGCTCGGTTGGATTGTTTGTGGAGGCGGAGGCCCTGACGATGGTAAGGTCCTAATGGC-SizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
.......................................................CATTTATCTGTCTCCTGGTTTGCCCTC.........................................................................2711.001000010
.....................................................CACATTTATCTGTCTCCTGGTTTGCCC...........................................................................2711.001000010
...................................................................................................................................GACGATGGTAAGGTCCTAATGGC-2311.001000010
............................TTTTACG-AGCTGCTTTGTGTGG........................................................................................................22200.357700000
..........................................................TTATCTGTCTCCTGGTTTGCCCTCC........................................................................2530.331000001
.........................................................TTTATCTGTCTCCTGGTTTGCCCT..........................................................................2480.252000011
.........TA--ATTGGAGCTGAATTATTTTACG-AG.....................................................................................................................2660.171000010
.................................................................................CCATCCAAAAAACTCGGCTCGGTTG.................................................25200.153000030
........................................................................................................TGGATTGTTTGTGGAGGCGGA..............................21200.153000030
........................................................ATTTATCTGTCTCCTGGTTTGCCCTC.........................................................................2670.141000010
.........................................................TTTATCTGTCTCCTGGTTTGCCCTC.........................................................................2580.131000001
..............................................................................................TCGGCTCGGTTGGATTGTTTGTGG.....................................24200.102000020
..........................................................TTATCTGTCTCCTGGTTTGCCC...........................................................................22100.101000010
.........................................................TTTATCTGTCTCCTGGTT................................................................................18100.101000001
................................................................................TCCATCCAAAAAACTCGGCTCGGTTG.................................................26200.102000020
.............................................................................................................TGTTTGTGGAGGCGGAGG............................18200.102000020
.........................................................................TTTGCCCTCCATCCAAAAAACTCGGCT.......................................................27200.102000020
...........................................................................TGCCCTCCATCCAAAAAACTCGGCTC......................................................26200.102000020
..............................................................CTGTCTCCTGGTTTGCCCTCCATC.....................................................................24200.051000001
..........................................................................................................GATTGTTTGTGGAGGCGGAGGCCCT........................25200.051000010
...........................................................................TGCCCTCCATCCAAAAAACTCGGCT.......................................................25200.051000010
.........................................................................TTTGCCCTCCATCCAAAAAACTCGGCTC......................................................28200.051000010
.....................................................................................................GGTTGGATTGTTTGTGGAGGCGG...............................23200.051000010
........................................................................................................TGGATTGTTTGTGGAGGCGGAGGCCCTG.......................28200.051000010
..................................................................................................................GTGGAGGCGGAGGCCCTGACGATG.................24200.051000001
...............................................................TGTCTCCTGGTTTGCCCTCCATCCAAAA................................................................28200.051000010
...........................................................................TGCCCTCCATCCAAAAAACTCGGCTCGG....................................................28200.051000001
..........................................................................................AAACTCGGCTCGGTTGGATTGTTTG........................................25200.051000010
............................TTTTACG-AGCTGCTTTGTGTGGGG......................................................................................................24200.051100000
.....................................................................CTGGTTTGCCCTCCATCCAAAAAACTC...........................................................27200.051000001
..................................................................................CATCCAAAAAACTCGGCTCGGTTGGA...............................................26200.051000001
..................................................................................CATCCAAAAAACTCGGCTCGGTTGGAT..............................................27200.051000001
...................................................................................................TCGGTTGGATTGTTTGTGGAGGCGG...............................25200.051000010
droBip1
TCGATCTTCTC--ATCGGAG----TCTGTTCTATG-GGCTGCTGTGTGTTTGGCAAATTAAGCTCTCAGCCGGCCTGCCATTGCTGCAGAAAACCCAACTGGGATGGGTCGTGTGTGGAGGCGGTTCAC--------------------------SizeHit CountTotal NormTotal
No Reads
dp5
TCGATCTGCTA--ATTGGCGCAAGTCTGTTTTTCG-AGCTGCTGTGTGTTGGTCAGGTCAAGCTACTGCCAGGATTGCCTTCAATTCAGAAAACGCGCTTGGGATGGGTCGTGTCTGGAAGTTGTTCGCGTTTAAAAGGTTCCTCGTTGATGGTCSizeHit CountTotal NormTotalV112
Male-body		V043
Embryo		V051
Head		M022
Male-body		M040
Female-body		M059
Embryo		M062
Head
.............................................................................................................CGTGTCTGGAAGTTGTTCGCGT........................22102.002000002000
.............................................................................................................CGTGTCTGGAAGTTGTTCGCGTT.......................23101.801820001600
.............................................................................................................CGTGTCTGGAAGTTGTTCGCGTTT......................2491.0090000900
.......................................TGCTGTGTGTTGGTCAGGTCAAG.............................................................................................2311.0010000100
................................................................................TCAATTCAGAAAACGCGCTTGGGA...................................................2470.7150000500
.................................................TGGTCAGGTCAAGCTACTGCCAGG..................................................................................24160.691100001100
.............................................................................................................CGTGTCTGGAAGTTGTTCGC..........................20100.6060000600
............................................................................................................TCGTGTCTGGAAGTTGTTCGCGTT.......................24100.5052000300
.............................................................................................................CGTGTCTGGAAGTTGTTCGCGTTTA.....................2590.4442000200
............................................................................................................TCGTGTCTGGAAGTTGTTCGCGT........................23100.4041000300
............................................................................................................TCGTGTCTGGAAGTTGTTCGCG.........................22100.4040000400
............................................................................................................................TTCGCGTTTAAAAGGTTCCTCGTTGA.....2680.3830000300
............................................................................................................TCGTGTCTGGAAGTTGTTCGCGTTT......................2590.3332000100
...........................................................................TGCCTTCAATTCAGAAAACGCGCTT.......................................................2560.3321000100
..............................................................................................................GTGTCTGGAAGTTGTTCGCGTT.......................22100.3030000300
..............................................................................................................GTGTCTGGAAGTTGTTCGCGT........................21100.3030000300
..........................................TGTGTGTTGGTCAGGTCAAGCTACTG.......................................................................................26140.2940010300
................................................................................TCAATTCAGAAAACGCGCTTGGG....................................................2370.2920000200
...........................................................................................AACGCGCTTGGGATGGGT..............................................18110.2730000300
............................................TGTGTTGGTCAGGTCAAGCTACTGC......................................................................................25160.2540000400
............................................TGTGTTGGTCAGGTCAAGCTACTG.......................................................................................24160.2541000300
............................................................................................................TCGTGTCTGGAAGTTGTTCGCGTTTAA....................2790.2220010100
..........................................TGTGTGTTGGTCAGGTCAAGCTAC.........................................................................................24140.2132000100
.....................................................................................TCAGAAAACGCGCTTGGGATGGGT..............................................24100.2022000000
............................................................................................................TCGTGTCTGGAAGTTGTTCGC..........................21100.2020010100
.....................................................................................TCAGAAAACGCGCTTGGGATGG................................................22100.2020100100
................................................................ACTGCCAGGATTGCCTTCAATTC....................................................................23100.2020000200
.....................................................................................TCAGAAAACGCGCTTGGGATGGG...............................................23100.2020000200
.................................................TGGTCAGGTCAAGCTACTGCC.....................................................................................21160.1930000300
.............................................GTGTTGGTCAGGTCAAGCTACTG.......................................................................................23160.1930000300
............................................................AGCTACTGCCAGGATTGCCTT..........................................................................21170.1830000300
..............................................................................CTTCAATTCAGAAAACGCGCTTGGG....................................................2570.1410000100
.........................................................................ATTGCCTTCAATTCAGAAAACGCGCT........................................................2670.1411000000
................................................................................TCAATTCAGAAAACGCGCTTGGGATGGGT..............................................2970.1411000000
.........................................CTGTGTGTTGGTCAGGTCA...............................................................................................19150.1320000200
...............TGGCGCAAGTCTGTTTTTCG-AGC....................................................................................................................2380.1310000100
..................................................................TGCCAGGATTGCCTTCAATTCAGA.................................................................2480.1310000100
...............TGGCGCAAGTCTGTTTTTCG-AGCT...................................................................................................................2480.1310000100
...........................................................................TGCCTTCAATTCAGAAAACGCG..........................................................2280.1310000100
............................................TGTGTTGGTCAGGTCAAGCTACT........................................................................................23160.1321000100
................................................................ACTGCCAGGATTGCCTTCAATTCAGAAA...............................................................2880.1310000100
.................................................................................CAATTCAGAAAACGCGCTTGGG....................................................2280.1310000100
...............................................................TACTGCCAGGATTGCCTTCAATTCAGA.................................................................2780.1311000000
............................................................................................................................TTCGCGTTTAAAAGGTTCCTCGTTG......2580.1310000100
.......................................................GGTCAAGCTACTGCCAGGATTGCC............................................................................24170.1220000200
....................................................TCAGGTCAAGCTACTGCCAGGATTGC.............................................................................26170.1221000100
.................................................TGGTCAGGTCAAGCTACTGC......................................................................................20170.1220100100
....................................................TCAGGTCAAGCTACTGCCAGGATTG..............................................................................25170.1220000200
.................................................TGGTCAGGTCAAGCTACTG.......................................................................................19170.1220000200
..................................................................................................................CTGGAAGTTGTTCGCGTTTAAAAGG................2590.1110000100
..................................................................................AATTCAGAAAACGCGCTTGGGATGG................................................2590.1110000100
....................................................................................TTCAGAAAACGCGCTTGGGA...................................................2090.1110000100
..............................................................................................................GTGTCTGGAAGTTGTTCGCGTTTAAA...................2690.1111000000
..............................................................................CTTCAATTCAGAAAACGCGCT........................................................2190.1110000100
..............................................................................................................GTGTCTGGAAGTTGTTCGCGTTT......................2390.1110000100
....................CAAGTCTGTTTTTCG-AGCT...................................................................................................................1990.1110000100
................................................................................................................GTCTGGAAGTTGTTCGCGTTT......................2190.1110000100
.............................................................................................................CGTGTCTGGAAGTTGTTCGCGTTTAAA...................2790.1111000000
...............................................................................................................TGTCTGGAAGTTGTTCGCGTTTAAAAG.................2790.1111000000
................................................................ACTGCCAGGATTGCCTTCAATTCA...................................................................2490.1110000100
..............................................................................................................GTGTCTGGAAGTTGTTCGCG.........................20100.1010000100
..............................................................................................................GTGTCTGGAAGTTGTTCGC..........................19100.1010000100
....TCTGCTA--ATTGGCGCAAGTCTGTTT............................................................................................................................25100.1010000100
.............................................................................................................CGTGTCTGGAAGTTGTTCGCG.........................21100.1011000000
.............................................................................................................CGTGTCTGGAAGTTGTTCG...........................19100.1010000100
...................................................................................................................TGGAAGTTGTTCGCGTTTAAAAGGT...............25100.1010000100
................................................................ACTGCCAGGATTGCCTTCAATT.....................................................................22100.1010000100
........................................................................................................TGGGTCGTGTCTGGAAGTTGTTCG...........................24100.1010000100
....................................................................................................................GGAAGTTGTTCGCGTTTAAAAGGT...............24100.1010000100
.....................................................................................TCAGAAAACGCGCTTGGGAT..................................................20100.1010000100
....................................................................CCAGGATTGCCTTCAATTC....................................................................19110.0910000100
................................................................................................................................CGTTTAAAAGGTTCCTCGTTGATGG..25110.0910000100
..........................................................................................AAACGCGCTTGGGATGGG...............................................18110.0910000100
...................................................................................................TGGGATGGGTCGTGTCTGGAAGTTG...............................25110.0910000100
............................................................................................ACGCGCTTGGGATGGGTC.............................................18110.0910000100
........................................................................................................TGGGTCGTGTCTGGAAGTTGTTC............................23120.0811000000
......TGCTA--ATTGGCGCAAGTCTGTTTT...........................................................................................................................24120.0811000000
..............................................................CTACTGCCAGGATTGCCTTCAAT......................................................................23120.0810000100
........................................................................................................TGGGTCGTGTCTGGAAGTTG...............................20120.0810000100
.......................................................................................................ATGGGTCGTGTCTGGAAGTTG...............................21120.0810000100
................................................................ACTGCCAGGATTGCCTTCAAT......................................................................21120.0810000100
......TGCTA--ATTGGCGCAAGTCTGTTTTT..........................................................................................................................25120.0810000100
.........................................................TCAAGCTACTGCCAGGATTGCCTTCAA.......................................................................27130.0810000100
.....CTGCTA--ATTGGCGCAAGTCTG...............................................................................................................................21130.0810000100
....TCTGCTA--ATTGGCGCAAGTC.................................................................................................................................20140.0710000100
..........................................TGTGTGTTGGTCAGGTCAAGCT...........................................................................................22140.0711000000
..............................................TGTTGGTCAGGTCAAGCTACTGCCAG...................................................................................26150.0710010000
..............................................TGTTGGTCAGGTCAAGCTACTGCCA....................................................................................25150.0710000100
...............................................GTTGGTCAGGTCAAGCTACTGCCA....................................................................................24150.0710000100
...........................................GTGTGTTGGTCAGGTCAAGC............................................................................................20150.0710000100
..............................................TGTTGGTCAGGTCAAGCTACTGCC.....................................................................................24150.0710000100
.............................................GTGTTGGTCAGGTCAAGCTACTGCC.....................................................................................25150.0710000100
..............................................TGTTGGTCAGGTCAAGCTAC.........................................................................................20160.0611000000
...................................................GTCAGGTCAAGCTACTGCCAGGAT................................................................................24160.0610000100
..............................................TGTTGGTCAGGTCAAGCTACT........................................................................................21160.0610000100
................................................TTGGTCAGGTCAAGCTACTGCCAGG..................................................................................25160.0610000100
...............................................GTTGGTCAGGTCAAGCTACTGC......................................................................................22160.0610000100
.................................................TGGTCAGGTCAAGCTACTGCCAGGAT................................................................................26160.0610000100
.............................................GTGTTGGTCAGGTCAAGCTACTGC......................................................................................24160.0610000100
..............................................TGTTGGTCAGGTCAAGCTACTG.......................................................................................22160.0610000100
....................................................TCAGGTCAAGCTACTGCCAGGA.................................................................................22170.0610000100
..........................................................CAAGCTACTGCCAGGATTGCCTT..........................................................................23170.0610000100
......................................................AGGTCAAGCTACTGCCAGGATT...............................................................................22170.0610000100
.......................................................GGTCAAGCTACTGCCAGGATTGCCTT..........................................................................26170.0610000100
.......................................................GGTCAAGCTACTGCCAGGATTG..............................................................................22170.0610000100
....................................................TCAGGTCAAGCTACTGCCAG...................................................................................20170.0610000100
.......................................................GGTCAAGCTACTGCCAGGATTGCCT...........................................................................25170.0610000100
....................................................TCAGGTCAAGCTACTGCCAGGATTGCCT...........................................................................28170.0610000010
.......................................................GGTCAAGCTACTGCCAGGATT...............................................................................21170.0610000100
................................................TTGGTCAGGTCAAGCTACTGC......................................................................................21170.0610000100
.........................................................TCAAGCTACTGCCAGGATTG..............................................................................20180.0610000100
droPer2
TCGATCTGCTA--ATTGGCGCAAATCTGTTTTTCG-AGCTCCTGTGTGTTGGTCAGGTCAAGCTACTGCCAGGATTGCCTTTAATTCAGAAAACGCGCTTGGGATGGGTCGTGTCTGGAGGTTGTTCGCGTTTAAAAGGTTCCTCGTTAATGGTCSizeHit CountTotal NormTotalV111
Male-body		V042
Embryo		V050
Head		V057
Head		M021
Embryo		M042
Female-body
.................................................................................TAATTCAGAAAACGCGCTTGGGA...................................................2350.201000001
........................TCTGTTTTTCG-AGCTCCTG...............................................................................................................19200.051000001
.........................................................................................AAAACGCGCTTGGGATGGG...............................................19200.051000100
.............................................................................................................................TCGCGTTTAAAAGGTTCCTCGTT.......23200.051000001
..........................................................CAAGCTACTGCCAGGATTGCCT...........................................................................22200.051000001
...............................TTCG-AGCTCCTGTGTGTTGGTCA....................................................................................................23200.051000001
....................................................TCAGGTCAAGCTACTGCCAGGATTGC.............................................................................26200.051100000
.............................TTTTCG-AGCTCCTGTGTGTTGGT......................................................................................................23200.051010000
............................TTTTTCG-AGCTCCTGTGTGTTGG.......................................................................................................23200.051100000
droVir3
TGGACCTCTTA--ATTGGAGCGAGCCTTTTCTATG-AGCTTTTGTCTGTTGGGTAAATTGTGCTTTTGCCAGGACTACCTCTTCTGCAAAAAACTCATCTTGGCTGGGTGGTGACCGGTGGATTTGAGAGACCGCGCAGTACCTCGTTGTTGGCTSizeHit CountTotal NormTotalV116
Male-body		V053
Head		V047
Embryo		M027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis
.........................................TTGTCTGTTGGGTAAATTGTGCTTT.........................................................................................2521.5030000010000020000000000000000000000000000000
.........................................TTGTCTGTTGGGTAAATTGTGCTTTT........................................................................................2620.5010000000000000000000000000000100000000000000
..GACCTCTTA--ATTGGAGCGAGC..................................................................................................................................2130.3310000000000000000000000000000100000000000000
.........................................TTGTCTGTTGGGTAAATTGTGC............................................................................................2230.3310000000000010000000000000000000000000000000
.......................GCCTTTTCTATG-AGCTTTTGTCTGT..........................................................................................................25160.1930000000000000000000000000000010000000000020
.......................GCCTTTTCTATG-AGCTTTTGTCT............................................................................................................23160.1320000000001000000000000000000000000000010000
...............TGGAGCGAGCCTTTTCTATG-AGCTTT.................................................................................................................26190.1120000000000000000000000000000000010001000000
.......................GCCTTTTCTATG-AGCTTTTGT..............................................................................................................21170.0610000000000000000000000000000000000000000100
..........................TTTTCTATG-AGCTTTTGTCTGTT.........................................................................................................23180.0610000000000000000000000000001000000000000000
..........................TTTTCTATG-AGCTTTTGTCTGTTG........................................................................................................24180.0610000000001000000000000000000000000000000000
..........................TTTTCTATG-AGCTTTTGT..............................................................................................................18190.0510000000000000000000000000000010000000000000
...............................................................................................................TGACCGGTGGATTTGAGAGACCGCG...................25200.0510000000000000000000000000000100000000000000
.....................................................................................................................GTGGATTTGAGAGACCGC....................18200.0510000000000000000000000000000000000000001000
................................................................................................................GACCGGTGGATTTGAGAGAC.......................20200.0510000000000000000000000000000000000000000100
droMoj3
TCACTCTTCAAGCTTCGGAGCTAGCCTGTTTTATG-ATTGGCTCTGTGTGGGACAAATCAAGTTGATGCCTGGATTTCCATTGTTACAGAAGACTCGTTTTGGTTGGGTTGTATCAGGTGGCTAGGCTCGCAACCACAACTCCGTGCTAATAGCTSizeHit CountTotal NormTotalV110
Male-body		V056
Head		V049
Head		V041
Embryo		M046
Female-body		M060
Embryo
..............................................................................CATTGTTACAGAAGACTCGTTTTGGT...................................................2611.001100000
...................................................................................................TTGGTTGGGTTGTATCAGGTGGC.................................23200.051100000
..........................................TCTGTGTGGGACAAATCAAGTTGAT........................................................................................25200.051100000
..........................................TCTGTGTGGGACAAATCAAGTTGATGC......................................................................................27200.051000010
...............................................................................................................................TCGCAACCACAACTCCGTGCTAATAGC.27200.051000001
droGri2
T---------------------------------------GCTGTGCGTTGGTCAGATCAAGCTCGTGCCTGGACTACCATTGTTACAAAAGACTCGTCTTGGTTGGGTAGTCACAGGTGG----------------------------------SizeHit CountTotal NormTotalV109
Male-body		M041
Female-body
No Reads

Generated: 12/06/2013 at 02:28 PM