ID:

dsi_248

 Coordinate:

chr3h_Mrandom_054:968-1027 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.8

Flybase annnotation

intergenic

Repeatable elements

NameClassFamily
GTWIN_I-intLTRGypsy

Sense Strand Reads

ACGTTAGATCTAAAGTCCGGCTATCACCAGATATACTTGGCCGAACATGACCGTGAAAAGACTTCTTTTTCGGTAAACGGCGGAAAGTATGAGTTTTGTCGGTTACCGTTCGGATTGAAGAATGCGGGAAGCATCTTCCAAAGTGCTATGTTTACGTAGA
*****************************************(((((.((((((....(((((((.(((((((........)))))))...)))))))..))))))..)))))............************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Ovary		 SRR618934
Ovary		 SRR553485
Ovary		 SRR553488
Ovary		 SRR553487
Ovary		 M025
embryo
 M053
Female-body		 O001
Testis
.............................................................................................................TCGGATTGAAGAATGCGGGAAGCATC......................... 26 0 3 167.33 502 200 39 62 69 33 91 8 0
..............................................................................................................CGGATTGAAGAATGCGGGAAGCATC......................... 25 0 3 59.00 177 77 28 27 15 9 19 2 0
....................................................................................AAGTATGAGTTTTGTCGGTTACCGT................................................... 25 0 3 44.00 132 10 85 0 9 3 18 7 0
.............................................................................................................TCGGATTGAAGAATGCGGGAAGCAT.......................... 25 0 3 20.67 62 32 1 8 14 7 0 0 0
....................................................................................AAGTATGAGTTTTGTCGGTTACCGTT.................................................. 26 0 3 20.33 61 4 42 0 3 0 5 7 0
...............................................................................................TTGTCGGTTACCGTTCGGATTGAAGAA...................................... 27 0 3 18.33 55 32 2 11 6 4 0 0 0
.......................................................................................TATGAGTTTTGTCGGTTACCGTTCGGA.............................................. 27 0 4 18.00 72 21 1 27 10 13 0 0 0
.........................................................................................TGAGTTTTGTCGGTTACCGTTCGGA.............................................. 25 0 4 17.75 71 19 5 25 5 17 0 0 0
.............................................................................................................TCGGATTGAAGAATGCGGGAAGCATCTT....................... 28 0 3 16.33 49 30 2 10 3 3 0 1 0
................................................................................................TGTCGGTTACCGTTCGGATTGAAGAA...................................... 26 0 3 11.67 35 4 0 9 6 15 1 0 0
...............................................................................................TTGTCGGTTACCGTTCGGATTGAAGA....................................... 26 0 4 9.00 36 23 0 6 4 3 0 0 0
...............................................................................................TTGTCGGTTACCGTTCGGATTGAA......................................... 24 0 4 8.25 33 24 0 6 2 1 0 0 0
.........................................................................................TGAGTTTTGTCGGTTACCGTTCGGAT............................................. 26 0 4 7.00 28 8 2 5 8 5 0 0 0
....................................................................................AAGTATGAGTTTTGTCGGTTACCGTTC................................................. 27 0 3 6.33 19 0 16 0 0 0 0 3 0
........................................................AAAGACTTCTTTTTCGGTAAACGGC............................................................................... 25 0 1 6.00 6 0 0 3 3 0 0 0 0
....................................................................................AAGTATGAGTTTTGTCGGTTACC..................................................... 23 0 3 5.67 17 0 8 0 1 2 6 0 0
......................................................................................GTATGAGTTTTGTCGGTTACCGT................................................... 23 0 4 5.50 22 3 1 7 2 8 0 1 0
..............................................................................................................CGGATTGAAGAATGCGGGAAGCAT.......................... 24 0 3 5.33 16 9 0 2 3 1 1 0 0
....................................................................................AAGTATGAGTTTTGTCGGTTACCG.................................................... 24 0 3 5.33 16 0 7 1 1 0 5 2 0
.......................................................................................TATGAGTTTTGTCGGTTACCGTTCGGAT............................................. 28 0 4 5.25 21 6 1 3 5 6 0 0 0
....................................................................................AAGTATGAGTTTTGTCGG.......................................................... 18 0 3 4.67 14 0 14 0 0 0 0 0 0
....................................................................................AAGTATGAGTTTTGTCGGT......................................................... 19 0 3 4.67 14 0 14 0 0 0 0 0 0
...............................................................................................TTGTCGGTTACCGTTCGGATTGA.......................................... 23 0 4 4.50 18 8 0 2 8 0 0 0 0
..............................................................................................................CGGATTGAAGAATGCGGGAAGCATCT........................ 26 0 3 4.33 13 2 2 1 3 1 3 1 0
....................................................................................AAGTATGAGTTTTGTCGGTT........................................................ 20 0 3 4.00 12 0 11 0 0 0 0 1 0
...............................................................................................................GGATTGAAGAATGCGGGAAGCATC......................... 24 0 3 3.67 11 0 11 0 0 0 0 0 0
..............................................................................................TTTGTCGGTTACCGTTCGGATTGAAGAA...................................... 28 0 3 3.33 10 2 0 4 2 2 0 0 0
......................................................................................GTATGAGTTTTGTCGGTTACCGTT.................................................. 24 0 4 3.25 13 0 1 5 0 7 0 0 0
.........................................................................................TGAGTTTTGTCGGTTACCGTTCGGATT............................................ 27 0 4 2.75 11 1 1 5 1 3 0 0 0
.......................................................................................................TACCGTTCGGATTGAAGAATGCGGGA............................... 26 0 3 2.33 7 0 3 0 0 4 0 0 0
......................................................................................GTATGAGTTTTGTCGGTTACCGTTCGGA.............................................. 28 0 4 2.25 9 4 0 4 0 1 0 0 0
.....................................................................................................GTTAGCGTTCGGATA............................................ 15 2 20 2.15 43 0 0 0 42 1 0 0 0
..........................................................................................................................TGCGGGAAGCATCTTCCAAAGTGCTA............ 26 0 1 2.00 2 0 2 0 0 0 0 0 0
............................................................................................GTTTTGTCGGTTACCGT................................................... 17 0 4 2.00 8 0 8 0 0 0 0 0 0
....................................................................................................GGTTAGCGTTCGGAT............................................. 15 1 6 1.83 11 0 0 0 11 0 0 0 0
.......................................................................................TATGAGTTTTGTCGGTTACCGTT.................................................. 23 0 4 1.75 7 0 2 3 1 1 0 0 0
..................................................................................................................TTGAAGAATGCGGGAAGCATCTTC...................... 24 0 4 1.75 7 0 7 0 0 0 0 0 0
....................................................................................AAGTATGAGTTTTGTCGGTTACCGA................................................... 25 1 3 1.67 5 0 5 0 0 0 0 0 0
....................................TTGGCCGAACATGACCGTGAAAAGA................................................................................................... 25 0 3 1.67 5 1 0 2 1 1 0 0 0
....................................................................................AAGTATGAGTTTTGTCGGTTACCGG................................................... 25 1 3 1.67 5 0 0 0 0 0 5 0 0
..............................................................................................................CGGATTGAAGAATGCGGGAAGCATCTT....................... 27 0 3 1.67 5 3 0 1 1 0 0 0 0
........................................................................................ATGAGTTTTGTCGGTTACCGT................................................... 21 0 4 1.50 6 0 6 0 0 0 0 0 0
..................................................................................................................TTGAAGAATGCGGGAAGCATCTT....................... 23 0 6 1.50 9 0 9 0 0 0 0 0 0
..........................................................................................GAGTTTTGTCGGTTACCGTTCGGA.............................................. 24 0 4 1.50 6 1 1 3 1 0 0 0 0
................................................................................................TGTCGGTTACCGTTCGGATTGAAGA....................................... 25 0 4 1.50 6 1 0 4 0 1 0 0 0
....................................................................................................GGTTAGCGTTCGGATA............................................ 16 2 20 1.40 28 0 0 0 28 0 0 0 0
.................................................................................................................ATTGAAGAATGCGGGAAGCATC......................... 22 0 3 1.33 4 0 4 0 0 0 0 0 0
...........................CAGATATACTTGGCCGAACATGACCGTGA........................................................................................................ 29 0 3 1.33 4 3 0 1 0 0 0 0 0
.............................................................................................................TCGGATTGAAGAATGCGGGAAGCATT......................... 26 1 3 1.33 4 2 0 0 1 0 1 0 0
....................................................................TTCGGTAAACGGCGGAAAGTATGAGT.................................................................. 26 0 3 1.33 4 2 1 1 0 0 0 0 0
.............................................................................................TTTTGTCGGTTACCGTT.................................................. 17 0 4 1.25 5 0 5 0 0 0 0 0 0
..................................................................................................................TTGAAGAATGCGGGAAGCATCTTCC..................... 25 0 4 1.25 5 0 5 0 0 0 0 0 0
............................................ACAGGACCGTGAAACGACTTT............................................................................................... 21 3 1 1.00 1 0 0 0 1 0 0 0 0
..............................................................................................................CGGATTGAAGAATGCGGGAAGCA........................... 23 0 3 1.00 3 1 0 2 0 0 0 0 0
....................................................................................AAGTATGAGTTTTGTCG........................................................... 17 0 5 1.00 5 0 5 0 0 0 0 0 0
.............................GATATACTTGGCCGAACATGACCG........................................................................................................... 24 0 3 1.00 3 2 0 1 0 0 0 0 0
...............................TATACTTGGCCGAACATGACCGTGA........................................................................................................ 25 0 3 1.00 3 1 1 0 1 0 0 0 0
............................................................................................................TTCGGATTGAAGAATGCGGGAAGC............................ 24 0 3 1.00 3 1 0 0 0 0 0 2 0
.............................................................................................................TCGGATTGAAGAATGCGGGAAGCA........................... 24 0 3 1.00 3 0 0 0 1 1 1 0 0
.............................................................................................................TCGGGTTGAAGAATGCGGGAAGCATC......................... 26 1 8 1.00 8 0 0 8 0 0 0 0 0
...........................................AACAGGACCGTGAAACGACT................................................................................................. 20 2 1 1.00 1 0 0 0 0 0 0 0 0
...........................................................GACTTCTTTTTCGGTAAACGGCGGT............................................................................ 25 1 1 1.00 1 0 0 1 0 0 0 0 0
.........................................CGAACAGGACCGTGAAACGACTC................................................................................................ 23 3 1 1.00 1 0 0 0 1 0 0 0 0
...............................................TGACCGTGAAAAGACTTCTTTTTCG........................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0
.........................................CGAACAGGACCGTGAAACGACT................................................................................................. 22 2 1 1.00 1 0 0 0 0 0 0 0 0
...............................................................TCTTTTTCGGTAAACGGCGGAAAGTA....................................................................... 26 0 4 1.00 4 1 2 0 1 0 0 0 0
.............................................CAGGACCGTGAAACGACTT................................................................................................ 19 2 2 1.00 2 0 0 0 1 1 0 0 0
.........................................................AAGACTTCTTTTTCGGTAAACGGC............................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0
............................................ACAGGACCGTGAAACGACT................................................................................................. 19 2 2 1.00 2 0 0 0 0 0 0 0 0
..................................................CCGTGAAAAGACTTCTTT............................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 1
...............................................TGACCGTGAAAAGACTTCTTTTT.......................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0
.............................................................................................TTTTGTCGGTTACCGT................................................... 16 0 4 1.00 4 0 4 0 0 0 0 0 0
........................................CCGAACAGGACCGTGA........................................................................................................ 16 1 6 0.83 5 2 0 0 1 2 0 0 0
.............................................................................................................TCGGATTGAAGAATGC................................... 16 0 5 0.80 4 2 2 0 0 0 0 0 0
.....................................................................................AGTATGAGTTTTGTCGGTTACCGT................................................... 24 0 4 0.75 3 0 0 0 1 1 0 1 0
...........................................................................................AGTTTTGTCGGTTACCGT................................................... 18 0 4 0.75 3 0 3 0 0 0 0 0 0
.........................................................................................TGAGTTTTGTCGGTTACCGTTCGG............................................... 24 0 4 0.75 3 0 0 0 1 2 0 0 0
...............................................................................................TTGTCGGTTACCGTTCGGATTGAAA........................................ 25 1 4 0.75 3 1 0 0 2 0 0 0 0
..............................................................................................TTTGTCGGTTACCGT................................................... 15 0 4 0.75 3 0 3 0 0 0 0 0 0
.......................................................................................TATGAGTTTTGTCGGTTACCGTTCGGATT............................................ 29 0 4 0.75 3 1 0 2 0 0 0 0 0
...............................TATACTTGGCCGAACATGACCGT.......................................................................................................... 23 0 3 0.67 2 0 0 1 1 0 0 0 0
............................................................................................................TTCGGATTGAAGAATGCGGGAAGCATC......................... 27 0 3 0.67 2 2 0 0 0 0 0 0 0
..................................................................................................TCGGTTACCGTTCGGATTGAAGAATGC................................... 27 0 3 0.67 2 1 0 0 0 1 0 0 0
...............................TATACTTGGCCGAACATGACCGTGAA....................................................................................................... 26 0 3 0.67 2 0 1 1 0 0 0 0 0
....................................................................................AAGTATGAGTTTTGTCGGTTA....................................................... 21 0 3 0.67 2 1 1 0 0 0 0 0 0
....................................TTGGCCGAACATGACCGTGAAAAGAC.................................................................................................. 26 0 3 0.67 2 0 0 1 0 0 0 1 0
............................................................................................................TTCGGATTGAAGAATGCGGGAAGCATCT........................ 28 0 3 0.67 2 0 0 1 0 1 0 0 0
...............................................................................GCGGAAAGTATGAGTTTTGTCGGTT........................................................ 25 0 3 0.67 2 0 0 0 0 2 0 0 0
...............................................................................................TTGTCGGTTACCGTTCGGATTGAAGAAT..................................... 28 0 3 0.67 2 1 0 1 0 0 0 0 0
.............................GATATACTTGGCCGAACATGAC............................................................................................................. 22 0 3 0.67 2 1 0 1 0 0 0 0 0
.........................................................................TAAACGGCGGAAAGTATGAGTTTTG.............................................................. 25 0 3 0.67 2 0 2 0 0 0 0 0 0
.............................................................................................................TCGGATTGAAGAATGCGGGAAGCATCT........................ 27 0 3 0.67 2 0 0 0 0 0 0 2 0
....................................................................................AAGTATGAGTTTTGTCGGTTACCGC................................................... 25 1 3 0.67 2 0 0 0 0 0 2 0 0
...................................................................................................CGGTTACCGTTCGGATTGAAGAATG.................................... 25 0 3 0.67 2 0 0 2 0 0 0 0 0
................................................................................................TGTCGGTTACCGTTCGGATTGAAGAATG.................................... 28 0 3 0.67 2 1 0 0 1 0 0 0 0
.......................................................................................................TACCGTTCGGATTGAAGAA...................................... 19 0 3 0.67 2 0 2 0 0 0 0 0 0
.................................TACTTGGCCGAACATGACCGTGAA....................................................................................................... 24 0 3 0.67 2 0 1 1 0 0 0 0 0
.............................GATATACTTGGCCGAACATGACCGTG......................................................................................................... 26 0 3 0.67 2 1 0 1 0 0 0 0 0
....................................................................................................................GAAGAATGCGGGAAGCATC......................... 19 0 10 0.60 6 0 6 0 0 0 0 0 0
....................................................................................AAGTATGAGTTTTGT............................................................. 15 0 5 0.60 3 0 3 0 0 0 0 0 0
........................................CCGAACAGGACAGTGAAA...................................................................................................... 18 2 7 0.57 4 2 2 0 0 0 0 0 0
.......................................................................................TATGAGTTTTGTCGGTTACCGT................................................... 22 0 4 0.50 2 0 2 0 0 0 0 0 0
..............................................................................................TTTGTCGGTTACCGTT.................................................. 16 0 4 0.50 2 0 2 0 0 0 0 0 0
..........................................GAACAGGACCGTGAAACGATTT................................................................................................ 22 3 2 0.50 1 1 0 0 0 0 0 0 0
.............................................................................................TTTTGTCGGTTACCGTTCGGATTGAA......................................... 26 0 4 0.50 2 1 0 1 0 0 0 0 0
......................................................................................GTATGAGTTTTGTCGGTTACCGA................................................... 23 1 4 0.50 2 1 0 1 0 0 0 0 0
.....................................................................................AGTATGAGTTTTGTCGGTTACCGTA.................................................. 25 1 4 0.50 2 0 2 0 0 0 0 0 0
..................................................................................................................TTGAAGAATGCGGGAAGCATCTTCCAA................... 27 0 4 0.50 2 0 2 0 0 0 0 0 0
............................................................................................GTTTTGTCGGTTACCGTT.................................................. 18 0 4 0.50 2 0 2 0 0 0 0 0 0
........................................................................................ATGAGTTTTGTCGGTTACCGTT.................................................. 22 0 4 0.50 2 0 2 0 0 0 0 0 0
.....................................................................................AGTATGAGTTTTGTCGGTTACCGTTCGGA.............................................. 29 0 4 0.50 2 1 0 1 0 0 0 0 0
.............................................................................................................TCGGATTGAAGAATGCG.................................. 17 0 4 0.50 2 0 2 0 0 0 0 0 0
............................................ACAGGACCGTGAAACGACTTA............................................................................................... 21 3 2 0.50 1 0 0 1 0 0 0 0 0
......................................................................................GTATGAGTTTTGTCGGTTACCGTTC................................................. 25 0 4 0.50 2 1 0 1 0 0 0 0 0
.............................................................................................................TCGGATTGAAGAATGCGGG................................ 19 0 4 0.50 2 0 2 0 0 0 0 0 0
...................................................................................................................TGAAGAATGCGGGAAGCATCTTC...................... 23 0 7 0.43 3 0 3 0 0 0 0 0 0
..................................................................................................................TTGAAGAATGCGGGAAGCATC......................... 21 0 7 0.43 3 0 3 0 0 0 0 0 0
.....................................................................................................................AAGAATGCGGGAAGCATC......................... 18 0 10 0.40 4 0 4 0 0 0 0 0 0
.........................................CGAACATGACCGTGAAAAGA................................................................................................... 20 0 3 0.33 1 0 1 0 0 0 0 0 0
...............................TATACTTGGCCGAACATGACCGTGAAAA..................................................................................................... 28 0 3 0.33 1 0 0 0 1 0 0 0 0
...............................................................................GCGGAAAGTATGAGTTTTGTCGGT......................................................... 24 0 3 0.33 1 0 0 1 0 0 0 0 0
...........................CAGATATACTTGGCCGAACATGAC............................................................................................................. 24 0 3 0.33 1 1 0 0 0 0 0 0 0
.........................................................................TAAACGGCGGAAAGTATGAGTTT................................................................ 23 0 3 0.33 1 0 1 0 0 0 0 0 0
..........................................................................................................ATCTCGGATTGAAGAATGCGGGAAGC............................ 26 3 3 0.33 1 0 1 0 0 0 0 0 0
....................................TTGGCCGAACATGACCGTGAAAT..................................................................................................... 23 1 3 0.33 1 0 0 0 0 1 0 0 0
...........................CAGATATACTTGGCCGAACATGACCGT.......................................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0
.............................................................................CGGCGGAAAGTATGAGTTTTGTCGGT......................................................... 26 0 3 0.33 1 0 0 0 1 0 0 0 0
.............................................................................................................TCGGATTGAAGAATGCTGGAAGCATC......................... 26 1 3 0.33 1 0 0 0 0 0 1 0 0
....................................................................................AAGTATGAGTTTTCTCGGTTACCGT................................................... 25 1 3 0.33 1 0 1 0 0 0 0 0 0
..............................................................................................................TGGATTGAAGAATGCGGGAAGCATC......................... 25 1 3 0.33 1 0 0 1 0 0 0 0 0
...............................TATACTTGGCCGAACATGACCGAGAAAAA.................................................................................................... 29 2 3 0.33 1 1 0 0 0 0 0 0 0
................................................................................................................GATTGAAGAATGCGGGAAGCAT.......................... 22 0 3 0.33 1 0 1 0 0 0 0 0 0
....................................................................................AAGTATGATTTTTGTCGGTTACCGT................................................... 25 1 3 0.33 1 0 1 0 0 0 0 0 0
..........................................GAACATGACCGTGAAAA..................................................................................................... 17 0 3 0.33 1 0 1 0 0 0 0 0 0
.................................................................................GGAAAGTATGAGTTTTGTCGGTTACCGTT.................................................. 29 0 3 0.33 1 0 0 0 0 0 0 1 0
........................................CCGAACAGGACCGTGAAACG.................................................................................................... 20 2 3 0.33 1 1 0 0 0 0 0 0 0
.................................................................................GGAAAGTATGAGTTTTGTCGGTT........................................................ 23 0 3 0.33 1 0 0 0 0 1 0 0 0
..................................................................................................TCAGTTACCGTTCGGATTGAAGAATGC................................... 27 1 3 0.33 1 0 0 0 0 1 0 0 0
........................................................................................................ACCGTTCGGATTGAAGAATGCGGGA............................... 25 0 3 0.33 1 0 1 0 0 0 0 0 0
...........................................................................................................GTTCGGATTGAAGAATGCGGGAAGCATC......................... 28 0 3 0.33 1 0 0 0 0 0 0 1 0
.............................................................................................................TCGGATTGAAGAATGCGGTAAGCATC......................... 26 1 3 0.33 1 0 0 0 0 0 1 0 0
....................................................................................AAGTATGAGTTTTGTCGGATACCGT................................................... 25 1 3 0.33 1 0 1 0 0 0 0 0 0
..............................................................................................................CGGATTGAAGAATGCGGGAAGCAAA......................... 25 2 3 0.33 1 0 1 0 0 0 0 0 0
.................................TACTTGGCCGAACATGACCGTG......................................................................................................... 22 0 3 0.33 1 0 0 0 0 1 0 0 0
...............................................................................................................GGATTGAAGAATGCGGGAAGCATCT........................ 25 0 3 0.33 1 0 1 0 0 0 0 0 0
....................................................................................AAGTATGAGTTTTGTCGGTTACCC.................................................... 24 1 3 0.33 1 0 1 0 0 0 0 0 0
.......................................................................................................TACCGTTCGGATTGAAGAATGCGGG................................ 25 0 3 0.33 1 0 0 1 0 0 0 0 0
.............................................................................................................TCGGATTGAATAATGCGGAAAGCATC......................... 26 2 3 0.33 1 0 0 0 0 1 0 0 0
.............................GATATACTTGGCCGAACATGACCGTGA........................................................................................................ 27 0 3 0.33 1 1 0 0 0 0 0 0 0
...............................................................................................TTTTCGGTTACCGTTCGGATTGAAGAA...................................... 27 1 3 0.33 1 0 0 0 1 0 0 0 0
.............................................................................................................TCGGATTGAAGAATGCGGGAAGCAAC......................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0
....................................................................................................GGTTAGCGTTCGGATAG........................................... 17 2 9 0.33 3 0 0 0 3 0 0 0 0
...............................................................................GCGGAAAGTATGAGTTTTGTCGG.......................................................... 23 0 3 0.33 1 0 0 0 0 1 0 0 0
...........................CAGATATACTTGGCCGAACATGACCGTG......................................................................................................... 28 0 3 0.33 1 0 0 1 0 0 0 0 0
....................................................................................................GGTTACCGTTCGGATTGAAGAA...................................... 22 0 3 0.33 1 0 0 1 0 0 0 0 0
....................................................................................AAGTATGGGTTTTGTCGGTTACCGTT.................................................. 26 1 3 0.33 1 0 0 0 0 0 1 0 0
................................................................................CGGAAAGTATGAGTTTTGTCGG.......................................................... 22 0 3 0.33 1 0 1 0 0 0 0 0 0
...........................................AACAGGACAGTGAAACGACT................................................................................................. 20 3 3 0.33 1 0 0 0 1 0 0 0 0
....................................................................................AAGTATGAGTTTTGTCGGTG........................................................ 20 1 3 0.33 1 0 1 0 0 0 0 0 0
.......................................................................................................TACCGTTCGGATTGAAGAATGCGGGAA.............................. 27 0 3 0.33 1 0 0 0 0 0 1 0 0
.............................................................................................................TCGGATTGAAGAATGAGGGAAGCATC......................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0
...................................................................................................................TGAAGAATGCGGGAAGCATCTT....................... 22 0 9 0.33 3 0 3 0 0 0 0 0 0
.............................................................................................................TTGGATTGAAGAATGCGGGAAGCATC......................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0
..............................ATATACTTGGCCGAACATGACCGT.......................................................................................................... 24 0 3 0.33 1 0 1 0 0 0 0 0 0
...............................................................................................................GGATTGAAGAATGCGGGAAGCAT.......................... 23 0 3 0.33 1 0 1 0 0 0 0 0 0
..............................................................................................................CGGATTGAAGAACGCGGGAAGCATC......................... 25 1 3 0.33 1 0 0 0 1 0 0 0 0
....................................................................................AGGTATGAGTTTTGTCGGT......................................................... 19 1 3 0.33 1 0 1 0 0 0 0 0 0
.............................................................................................................TCGGATTGAAGAATGCGGGAAGCATCTA....................... 28 1 3 0.33 1 0 0 1 0 0 0 0 0
..........................................GAACAGGACAGTGAAACGACT................................................................................................. 21 3 3 0.33 1 0 0 0 1 0 0 0 0
...........................CAGATATACTTGGCCGAACATGAAAC........................................................................................................... 26 3 3 0.33 1 1 0 0 0 0 0 0 0
..........................................................................................................CGTTCGGATTGAAGAATGCGGGAAGCATC......................... 29 0 3 0.33 1 1 0 0 0 0 0 0 0
................................................................................................................GATTGAAGAATGCGGGAAGCATCT........................ 24 0 3 0.33 1 0 1 0 0 0 0 0 0
.....................................TGGCCGAACATGACCGTGAAAAGA................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0
...................................................................................CACGTATGAGTTTTGTCGGTTACCGT................................................... 26 2 3 0.33 1 0 1 0 0 0 0 0 0
............................AGATATACTTGGCCGAACATGACCGTG......................................................................................................... 27 0 3 0.33 1 0 0 1 0 0 0 0 0
.........................ACCAGATATACTTGGCCGAACATGAC............................................................................................................. 26 0 3 0.33 1 0 0 1 0 0 0 0 0
..............................................................................................................CAGATTGAAGAATGCGGGAAGCATC......................... 25 1 3 0.33 1 1 0 0 0 0 0 0 0
................................................GACCGTGAAACGACT................................................................................................. 15 1 3 0.33 1 0 0 0 0 1 0 0 0
...................................................................................AAAGTATGAGTTTTGTCGGTTACC..................................................... 24 0 3 0.33 1 0 0 0 1 0 0 0 0
...................................................................................................CGGTTACCGTTCGGATTGAAGAATGC................................... 26 0 3 0.33 1 0 1 0 0 0 0 0 0
................................................................................................................GATTGAAGAATGCGGGAAGCATC......................... 23 0 3 0.33 1 0 1 0 0 0 0 0 0
.................................TACTTGGCCGAACATGACCGTGAAAAGA................................................................................................... 28 0 3 0.33 1 0 0 0 0 1 0 0 0
....................................................................................AAGTATGAGTTTTGTCGGTTACCATT.................................................. 26 1 3 0.33 1 0 1 0 0 0 0 0 0
.............................................................................................................TCGGATTGAAGTATGCGGGAAGC............................ 23 1 3 0.33 1 0 0 0 1 0 0 0 0
........................................CCGAACAGGACCGTGAAA...................................................................................................... 18 1 3 0.33 1 0 0 0 1 0 0 0 0
.............................................................................................................TCGGATTGAAGAATGCGGGAAGC............................ 23 0 3 0.33 1 1 0 0 0 0 0 0 0
.............................................................................................................TCGGATTGAAGAATGCGGGAAGCACC......................... 26 1 3 0.33 1 0 0 0 0 0 1 0 0
.................................................................................................GTCGGTTACCGTTCGGATTGAAGAA...................................... 25 0 3 0.33 1 0 0 0 1 0 0 0 0
.............................GATATACTTGGCCGAACATGACCGT.......................................................................................................... 25 0 3 0.33 1 0 0 1 0 0 0 0 0
....................................................................................AAGTATGAGTTTTGTCGGTTACCGTGCCA............................................... 29 3 3 0.33 1 0 1 0 0 0 0 0 0
....................................................................TTCGGTAAACGGCGGAAAGTATGAGTT................................................................. 27 0 3 0.33 1 0 0 1 0 0 0 0 0
...............................................................................................TTGTCGGTTACCGTTCGAATTGAAGAA...................................... 27 1 3 0.33 1 1 0 0 0 0 0 0 0
.............................................................................................................ACGGATTGAAGAATGCGGGAAGCATCTT....................... 28 1 3 0.33 1 1 0 0 0 0 0 0 0
.............................................................................................TTTTGTCGGTTACCGTTCGGATTGAAGAA...................................... 29 0 3 0.33 1 0 0 1 0 0 0 0 0
..................................................................................GAAAGTATGAGTTTTGTCGGTTACCGT................................................... 27 0 3 0.33 1 0 0 0 0 1 0 0 0
....................................................................................AAGTATGAGTTTTGTCGGTTACCGTTGAA............................................... 29 3 3 0.33 1 0 1 0 0 0 0 0 0
....................................................................................AAGTATGAGTTTTGTCGGTTACCGTGC................................................. 27 1 3 0.33 1 0 1 0 0 0 0 0 0
................................................................................................TGTCGGTTACCGTTCGGATTGAAGAAT..................................... 27 0 3 0.33 1 0 0 1 0 0 0 0 0
............................................................................................................TTCAGATTGAAGAATGCGGGAAGCAT.......................... 26 1 3 0.33 1 0 0 0 0 0 0 1 0
............................................................................................................TTCGGATTGAAGAATGCGGGAAGCATCTT....................... 29 0 3 0.33 1 0 0 0 0 1 0 0 0
.............................................................................CGGCGGAAAGTATGAGTTTTGTCGG.......................................................... 25 0 3 0.33 1 0 1 0 0 0 0 0 0
....................................................................................AGGTATGAGTTTTGTCGGTTACCGTTC................................................. 27 1 3 0.33 1 0 1 0 0 0 0 0 0
.............................................................................................................TCGGATTGAAGAATGCGTGAAGCATC......................... 26 1 3 0.33 1 0 0 0 1 0 0 0 0
.............................................................................................................TCGGATTGAGGAATGCGGGAAGCATC......................... 26 1 3 0.33 1 0 0 0 0 0 1 0 0
...............................TATACTTGGCCGAACATGACCGTG......................................................................................................... 24 0 3 0.33 1 0 0 0 0 1 0 0 0
........................................................................................................................AATGCGGGAAGCATC......................... 15 0 10 0.30 3 0 3 0 0 0 0 0 0
.......................................................................................................................GAATGCGGGAAGCATC......................... 16 0 10 0.30 3 0 3 0 0 0 0 0 0
......................................................................................................................AGAATGCGGGAAGCATCTTCC..................... 21 0 7 0.29 2 0 2 0 0 0 0 0 0
..................................................................................................................TTGAAGAATGCGGGAAGCATCT........................ 22 0 7 0.29 2 0 2 0 0 0 0 0 0
......................................................................................GTATGAGTTTTGTCGGTTACCGTA.................................................. 24 1 4 0.25 1 0 0 0 0 1 0 0 0
....................................................................TTCGGTAAACGGCGGAAAGTATGAG................................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0 0
.....................................................................................AGTATGAGTTTTGTCGGTTACCGATA................................................. 26 2 4 0.25 1 1 0 0 0 0 0 0 0
.....AGTTCTAAAGTCCGACGATC....................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 1 0
......................................................................................GTATGAGTTTTGTCGGTTACCGTC.................................................. 24 1 4 0.25 1 0 0 0 0 1 0 0 0
........................................................................................ATGATTTTTGTCGGTTACCGT................................................... 21 1 4 0.25 1 0 1 0 0 0 0 0 0
..............................................................................................................CGGGTTGAAGAATGCGGGAAGCATC......................... 25 1 8 0.25 2 0 0 0 0 2 0 0 0
......................................................................................GTATGATTTTTGTCGGTTACCG.................................................... 22 1 4 0.25 1 0 0 0 0 1 0 0 0
.................................................................TTTTTCGGTAAACGGCGGAAAGTA....................................................................... 24 0 4 0.25 1 0 0 0 0 1 0 0 0
......................................................................................GTATGAGTTTTGTCGGTTACCGTTA................................................. 25 1 4 0.25 1 0 0 0 1 0 0 0 0
.......................................................................................TATGAGTTTTGTCGGTTACCGTTCGG............................................... 26 0 4 0.25 1 1 0 0 0 0 0 0 0
......................................................................................GTATGAGTTTTGTCGGT......................................................... 17 0 4 0.25 1 0 1 0 0 0 0 0 0
..............................................................................................................CGGATTGAAGAATGCGGGA............................... 19 0 4 0.25 1 0 1 0 0 0 0 0 0
......................................................................................GTATGAGTTTTGTCGGTTA....................................................... 19 0 4 0.25 1 0 1 0 0 0 0 0 0
...........................................................................................AGTTTTGTCGGTTACCGTTCGGAT............................................. 24 0 4 0.25 1 0 1 0 0 0 0 0 0
.......................................................................................TATGAGTTTTGTCGGTTACCGGTCGGA.............................................. 27 1 4 0.25 1 0 0 0 0 1 0 0 0
..........................................................................................GAGTTTTGTCGGTTAC...................................................... 16 0 4 0.25 1 0 1 0 0 0 0 0 0
......................................................................................GTATGAGTTTTGTCGGTTACCGTTAAA............................................... 27 3 4 0.25 1 0 0 1 0 0 0 0 0
...............................................................................................TTGTCGGTTACCGTTCGGATTGAAC........................................ 25 1 4 0.25 1 0 0 0 1 0 0 0 0
...........................................................................................................GTTCGGATTGAAGAATGCGG................................. 20 0 4 0.25 1 0 1 0 0 0 0 0 0
.............................................................................................................TCGGATTGAAGAATGCGGGA............................... 20 0 4 0.25 1 0 1 0 0 0 0 0 0
.................................................................................................GTCGGTTACCGTTCGGATTGAAGAT...................................... 25 1 4 0.25 1 0 0 0 1 0 0 0 0
.......................................................................................TATGAGTTTTGTCGGTTACCGTTCGGAA............................................. 28 1 4 0.25 1 0 0 0 1 0 0 0 0
......................................................................................GTATGAGTTTTGTCGGTTACCGTTCGA............................................... 27 1 4 0.25 1 0 0 1 0 0 0 0 0
.............................................CAGGACCGTGAAACGACT................................................................................................. 18 2 4 0.25 1 0 0 0 0 0 0 0 0
.......................................................................................TTTGAGTTTTGTCGGTTACCGT................................................... 22 1 4 0.25 1 0 1 0 0 0 0 0 0
............................................................................................................TTCGGATTGAAGAATGCGGAAA.............................. 22 1 4 0.25 1 0 1 0 0 0 0 0 0
..............................................................................................TTTGTCGGTTACCGTTCGGATTGAAGA....................................... 27 0 4 0.25 1 0 0 1 0 0 0 0 0
..................................................................................................................TTGAAGAATGCGGGAAGCATCTTCCAAA.................. 28 0 4 0.25 1 1 0 0 0 0 0 0 0
..........................................................................................GAGTTTTGTCGGTTACCGTT.................................................. 20 0 4 0.25 1 0 1 0 0 0 0 0 0
............................................................................................GTTTTGTCGGTTACCGTTCGGATTGAA......................................... 27 0 4 0.25 1 0 0 1 0 0 0 0 0
..........................................................................................GAGTTTTGTCGGTTACCG.................................................... 18 0 4 0.25 1 0 1 0 0 0 0 0 0
..............................................................................................TTTGTCGGTTACCGTTCGGATTGA.......................................... 24 0 4 0.25 1 1 0 0 0 0 0 0 0
.........................................................................................TGAGTTTTGTCGGTTACCGTTCGGT.............................................. 25 1 4 0.25 1 0 0 0 0 1 0 0 0
..............................................................................................................CTGATTGAAGAATGCGGGAAGCAT.......................... 24 1 4 0.25 1 0 0 1 0 0 0 0 0
...............................................................................................TTGTCGGTTACCGTTCGGATTGAAGC....................................... 26 1 4 0.25 1 1 0 0 0 0 0 0 0
.....................................................................................AGTATGAGTTTTGTCGGTTACCGTT.................................................. 25 0 4 0.25 1 0 0 0 0 1 0 0 0
....................................................................................GAGTATGAGTTTTGTCGGTTACCGT................................................... 25 1 4 0.25 1 0 1 0 0 0 0 0 0
........................................................................................ATGAGTTTTGTCGGTTACC..................................................... 19 0 4 0.25 1 0 1 0 0 0 0 0 0
...........................................................................................AGTTTTGTCGGTTACCGA................................................... 18 1 4 0.25 1 0 1 0 0 0 0 0 0
...........................................................................................AGTTTTGTCGGTTACCGTTCGGATTG........................................... 26 0 4 0.25 1 0 0 0 1 0 0 0 0
.............................................................................................TTTTGTCGGTTACCGTTC................................................. 18 0 4 0.25 1 0 1 0 0 0 0 0 0
.....................................................................................AGTATGAGTTTTGTCGGTTACCG.................................................... 23 0 4 0.25 1 0 0 0 1 0 0 0 0
......................................................................................GTATGAGTTTTGTCGGTTACCGTTCT................................................ 26 1 4 0.25 1 0 0 1 0 0 0 0 0
................................................................................................TGTCGGTTACCGTTCGGATTGAAGAAA..................................... 27 1 4 0.25 1 0 0 0 1 0 0 0 0
......................................................................................GTATGAGTTTTGTCGGTTACCGTTAA................................................ 26 2 4 0.25 1 0 1 0 0 0 0 0 0
................................................................................................TGTCGGTTACCGTTCGGATTGAA......................................... 23 0 4 0.25 1 0 0 0 1 0 0 0 0
.....................................................................................AGTATGAGTTTTGTCGGTTACCGTTC................................................. 26 0 4 0.25 1 0 0 1 0 0 0 0 0
.........................................................................................TGAGTTTTGTCGGTTACCG.................................................... 19 0 4 0.25 1 0 1 0 0 0 0 0 0
........................CACCAGATATACTTGGCCGAACATG............................................................................................................... 25 0 4 0.25 1 0 0 0 0 1 0 0 0
...............................................................................................TGGGCGGTTACCGTTCGGATTGAA......................................... 24 2 4 0.25 1 1 0 0 0 0 0 0 0
...............................................................................................TTCTCGGTTACCGTTCGGATTGAAGA....................................... 26 1 4 0.25 1 0 0 0 0 1 0 0 0
...............................................................................................TTGTCGGTTACCATTCGGATTGAAG........................................ 25 1 4 0.25 1 1 0 0 0 0 0 0 0
..............................................................................................TTTGTCGGTTACCGTTC................................................. 17 0 4 0.25 1 0 1 0 0 0 0 0 0
................................................................................................TGTCGGTTACCGTTCGGATTGAAGT....................................... 25 1 4 0.25 1 0 0 1 0 0 0 0 0
............................................................................................GTTTTGTCGGTTACC..................................................... 15 0 4 0.25 1 0 1 0 0 0 0 0 0
......................................................................................GTATGAGTTTTGTCGGTTACCGTTCGGATT............................................ 30 0 4 0.25 1 1 0 0 0 0 0 0 0
................................................................................................TGTCGGTTACCGTTCGGATTGAAG........................................ 24 0 4 0.25 1 0 1 0 0 0 0 0 0
......GATCTAAAGTCCGGCT.......................................................................................................................................... 16 0 4 0.25 1 0 1 0 0 0 0 0 0
...............................................................................GCGGAAAGTATGAGTTTTGTCG........................................................... 22 0 4 0.25 1 0 0 0 0 1 0 0 0
......................................................................................GTATGAGTTTTGTCGGTTACCGTTCGG............................................... 27 0 4 0.25 1 0 0 1 0 0 0 0 0
...........................................................................................................GTTCGGATTGAAGAATGCGGG................................ 21 0 4 0.25 1 0 1 0 0 0 0 0 0
...............................................................................................TTGTCGGTTACCGTTCGGATTGAAG........................................ 25 0 4 0.25 1 1 0 0 0 0 0 0 0
..............................................................................................................CGGATTGAAGAATGCGGGAAG............................. 21 0 4 0.25 1 0 1 0 0 0 0 0 0
.........................................................................................TGAGTTTTGTCGGTTACCGTTCGGATC............................................ 27 1 4 0.25 1 0 0 1 0 0 0 0 0
............................................................................................................TTCGGATTGAAGAATGCGGGA............................... 21 0 4 0.25 1 0 1 0 0 0 0 0 0
...............................................................................................TTTGCGGTTACCGTTCGGATTGAAT........................................ 25 3 4 0.25 1 0 0 1 0 0 0 0 0
.........................................................................................TGAGTTTTGTCGGTTACCGTTCG................................................ 23 0 4 0.25 1 0 0 0 1 0 0 0 0
...............................................................................................TTGTCGGTTACCGTTCGGATTGAAGT....................................... 26 1 4 0.25 1 1 0 0 0 0 0 0 0
......................................................................................GTATGAGTTTTGTCGGTTACCG.................................................... 22 0 4 0.25 1 0 0 0 0 1 0 0 0
...............................................................................................TTGTCGGTTACCGTTCGGATTGAAGAT...................................... 27 1 4 0.25 1 1 0 0 0 0 0 0 0
........................................................................................ACGAGTTTTGTCGGTTACCGT................................................... 21 1 4 0.25 1 0 1 0 0 0 0 0 0
....................................................................................AAGTATGAATTTTGTCGGTTACCGTT.................................................. 26 1 4 0.25 1 0 1 0 0 0 0 0 0
.................................................................................................................ATTGAGGAATGCGGGAAGCT........................... 20 2 4 0.25 1 0 1 0 0 0 0 0 0
...................................................................................................CGGTTACCGTTCGGATTGAA......................................... 20 0 4 0.25 1 0 1 0 0 0 0 0 0
...............................................................................................TTGTCGGTTACCGTTCGGATTGAAGGT...................................... 27 2 4 0.25 1 0 1 0 0 0 0 0 0
...................................................................................................................TGAAGAATGCGGGAAGCAT.......................... 19 0 10 0.20 2 0 2 0 0 0 0 0 0
............................................ACATGACAGTGAAACGAC.................................................................................................. 18 2 5 0.20 1 0 0 0 1 0 0 0 0
....................................................................................AAGTATGAGTTTTGTC............................................................ 16 0 5 0.20 1 0 1 0 0 0 0 0 0
....................................................................................ACGTATGAGTTTTGTCG........................................................... 17 1 5 0.20 1 0 1 0 0 0 0 0 0
....................................................................................AGGTATGAGTTTTGTCG........................................................... 17 1 5 0.20 1 0 1 0 0 0 0 0 0
.......................................................................................................TACCATTCCGTTTGAAGAATGCGGGA............................... 26 3 5 0.20 1 0 0 0 1 0 0 0 0
.........................................CGAACAGGACAGTGAAACGAC.................................................................................................. 21 3 5 0.20 1 0 1 0 0 0 0 0 0
...................................................................................................................TGAAGAATGCGGGAAGCATC......................... 20 0 10 0.20 2 0 2 0 0 0 0 0 0
..............................................................................................................CGGATTGAAGAATGC................................... 15 0 5 0.20 1 0 1 0 0 0 0 0 0
......................................................................................................................AGAATGCGGGAAGCATC......................... 17 0 10 0.20 2 0 2 0 0 0 0 0 0
...................................................................................................................TGAAGAATGCGGGAAGCA........................... 18 0 10 0.20 2 0 2 0 0 0 0 0 0
.............................................................................................TTTTGTCGATTACCGTTCGGATTGAA......................................... 26 1 5 0.20 1 0 0 0 0 1 0 0 0
.......................................................................................................TACCGTTCGGATTGAAA........................................ 17 1 5 0.20 1 0 0 0 0 1 0 0 0
.........................................................................TAAACGGCGGAAAGTAT...................................................................... 17 0 5 0.20 1 0 1 0 0 0 0 0 0
..........................................GAACAGGACCGTGAA....................................................................................................... 15 1 6 0.17 1 0 0 0 1 0 0 0 0
...........................................................................................................GTTCGGATTGAAGAA...................................... 15 0 6 0.17 1 0 1 0 0 0 0 0 0

Anti-sense strand reads

TCTACGTAAACATAGCACTTTGGAAGATGCTTCCCGCATTCTTCAATCCGAACGGTAACCGACAAAACTCATACTTTCCGCCGTTTACCGAAAAAGAAGTCTTTTCACGGTCATGTTCGGCCAAGTATATCTGGTGATAGCCGGACTTTAGATCTAACGT
************************************............(((((..((((((..(((((((...(((((((........))))))).)))))))....)))))).)))))***************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Ovary		 SRR553486
Ovary		 SRR618934
Ovary		 SRR553488
Ovary		 SRR553487
Ovary		 M053
Female-body		 O001
Testis
 M025
embryo
 O002
Head
 M024
male body
............................................................................TCCGCCGTTTACCGAAAAAGAAGTCTTT........................................................ 28 0 1 130.00 130 70 48 1 7 4 0 0 0 0 0
..TACGTAAACATAGCACTTTGGAAGA..................................................................................................................................... 25 0 1 124.00 124 57 47 16 0 2 1 0 0 0 1
............................................................................TCCGCCGTTTACCGAAAAAGAAGTCTT......................................................... 27 0 1 103.00 103 54 34 1 10 3 1 0 0 0 0
..TACGTAAACATAGCACTTTGGAAGATGC.................................................................................................................................. 28 0 1 53.00 53 20 30 1 1 0 1 0 0 0 0
......TAAACATAGCACTTTGGAAGATGCT................................................................................................................................. 25 0 1 31.00 31 8 5 18 0 0 0 0 0 0 0
TCTACGTAAACATAGCACTTTGGAAGA..................................................................................................................................... 27 0 1 29.00 29 14 12 2 1 0 0 0 0 0 0
..................TTTGGAAGATGCTTCCCGCATTCTT..................................................................................................................... 25 0 7 27.57 193 0 2 187 0 0 4 0 0 0 0
..TACGTAAACATAGCACTTTGGAAGATG................................................................................................................................... 27 0 1 27.00 27 12 14 0 0 1 0 0 0 0 0
................................................CGAACGGTAACCGACAAAACTCATACTT.................................................................................... 28 0 3 26.67 80 35 35 0 5 5 0 0 0 0 0
..............................................................................................AGAAGTCTTTTCACGGTCATGTTCGGC....................................... 27 0 1 26.00 26 9 11 1 3 2 0 0 0 0 0
..TACGTAAACATAGCACTTTGGAAG...................................................................................................................................... 24 0 1 19.00 19 12 7 0 0 0 0 0 0 0 0
......................................TTCTTCAATCCGAACGGTAACCGACA................................................................................................ 26 0 3 19.00 57 9 3 0 20 24 1 0 0 0 0
...............................................................................................GAAGTCTTTTCACGGTCATGTTCGGC....................................... 26 0 1 17.00 17 11 3 1 0 2 0 0 0 0 0
......TAAACATAGCACTTTGGAAGATGC.................................................................................................................................. 24 0 1 16.00 16 3 10 3 0 0 0 0 0 0 0
..TACGTAAACATAGCACTTTGGAAGATGCT................................................................................................................................. 29 0 1 13.00 13 6 7 0 0 0 0 0 0 0 0
....CGTAAACATAGCACTTTGGAAGATGC.................................................................................................................................. 26 0 1 12.00 12 4 8 0 0 0 0 0 0 0 0
..................................CGCATTCTTCAATCCGAACGGTAACCGA.................................................................................................. 28 0 3 11.67 35 7 5 0 12 11 0 0 0 0 0
..............................................................................CGCCGTTTACCGAAAAAGAAGTCTTT........................................................ 26 0 1 11.00 11 4 6 0 0 1 0 0 0 0 0
..............................................TCCGAACGGTAACCGACAAAACTCA......................................................................................... 25 0 4 11.00 44 14 13 4 10 2 1 0 0 0 0
.......................................................TAACCGACAAAACTCATACTTTCCGC............................................................................... 26 0 3 10.33 31 4 16 0 10 0 1 0 0 0 0
.........................................TTCAATCCGAACGGTAACCGACAAAAC............................................................................................ 27 0 4 9.50 38 10 5 4 9 10 0 0 0 0 0
.............................................................................................AAGAAGTCTTTTCACGGTCATGTTCGGC....................................... 28 0 1 9.00 9 4 5 0 0 0 0 0 0 0 0
............TAGCACTTTGGAAGATGCTTCCCGCAT......................................................................................................................... 27 0 1 9.00 9 3 5 1 0 0 0 0 0 0 0
.....GTAAACATAGCACTTTGGAAGATGC.................................................................................................................................. 25 0 1 9.00 9 4 4 1 0 0 0 0 0 0 0
............................................................................................AAAGAAGTCTTTTCACGGTCATGTT........................................... 25 0 1 9.00 9 3 3 0 1 2 0 0 0 0 0
............................................................................TCCGCCGTTTACCGAAAAAGAAGTCT.......................................................... 26 0 1 8.00 8 0 7 1 0 0 0 0 0 0 0
...................TTGGAAGATGCTTCCCGCATTCTT..................................................................................................................... 24 0 7 7.43 52 0 0 47 0 0 5 0 0 0 0
............................................................................................AAAGAAGTCTTTTCACGGTCATGTTCGGC....................................... 29 0 1 7.00 7 0 4 0 0 3 0 0 0 0 0
.....................................................................................TACCGAAAAAGAAGTCTTTTCACGGT................................................. 26 0 1 7.00 7 0 0 7 0 0 0 0 0 0 0
..............................................TCCGAACGGTAACCGACAAAACTCATACTT.................................................................................... 30 0 3 7.00 21 12 7 0 0 2 0 0 0 0 0
..................TTTGGAAGATGCTTCCCGCATTCTTC.................................................................................................................... 26 0 7 6.71 47 5 1 38 0 0 3 0 0 0 0
................................................................AAACTCATACTTTCCGCCGTTTACCGA..................................................................... 27 0 3 6.33 19 10 3 0 1 5 0 0 0 0 0
...........................................................................................AAAAGAAGTCTTTTCACGGTCATGTT........................................... 26 0 1 6.00 6 3 1 0 0 2 0 0 0 0 0
TCTACGTAAACATAGCACTTTGGAAGATGC.................................................................................................................................. 30 0 1 6.00 6 3 3 0 0 0 0 0 0 0 0
.......................................................TAACCGACAAAACTCATACTTTCCGCC.............................................................................. 27 0 3 6.00 18 0 9 0 9 0 0 0 0 0 0
........AACATAGCACTTTGGAAGATGCT................................................................................................................................. 23 0 1 6.00 6 0 0 6 0 0 0 0 0 0 0
...................................................ACGGTAACCGACAAAACTCATACTT.................................................................................... 25 0 3 5.33 16 6 2 0 4 2 2 0 0 0 0
......................................TTCTTCAATCCGAACGGTAACCGACAA............................................................................................... 27 0 3 5.33 16 2 5 0 4 5 0 0 0 0 0
..............................................................................CGCCGTTTACCGAAAAAGAAGTCTT......................................................... 25 0 1 5.00 5 1 4 0 0 0 0 0 0 0 0
...............CACTTTGGAAGATGCTTCCCGCATTC....................................................................................................................... 26 0 1 5.00 5 2 3 0 0 0 0 0 0 0 0
.......................................................................................................TTCACGGTCATGTTCGGCCAAGTA................................. 24 0 3 4.67 14 2 5 1 2 1 0 3 0 0 0
...............................................CCGAACGGTAACCGACAAAACTCATACTT.................................................................................... 29 0 3 4.67 14 7 3 0 2 1 0 0 1 0 0
.........................................TTCAATCCGAACGGTAACCGACA................................................................................................ 23 0 4 4.50 18 4 3 2 3 6 0 0 0 0 0
...................TTGGAAGATGCTTCCCGCATTCTTC.................................................................................................................... 25 0 7 4.00 28 3 2 14 0 0 9 0 0 0 0
............................................................................TCCGCCGTTTACCGAAAAAGAAGTC........................................................... 25 0 1 4.00 4 2 0 1 0 0 1 0 0 0 0
..............................................................................................AGAAGTCTTTTCACGGTCATGTT........................................... 23 0 1 4.00 4 0 1 0 0 3 0 0 0 0 0
................ACTTTGGAAGATGCTTCCCGCATTC....................................................................................................................... 25 0 1 4.00 4 1 2 1 0 0 0 0 0 0 0
..........................................TCAATCCGAACGGTAACCGACAAAAC............................................................................................ 26 0 4 3.75 15 1 1 5 2 2 3 0 1 0 0
...........................TGCTTCCCGCATTCTTCAATCCGAACGG......................................................................................................... 28 0 3 3.67 11 5 5 0 0 0 1 0 0 0 0
.......................................................................TACTTTCCGCCGTTTACCGAAAAAGA............................................................... 26 0 4 3.50 14 4 3 0 5 2 0 0 0 0 0
...............CACTTTGGAAGATGCTTCCCGCATT........................................................................................................................ 25 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0
...........................................................................TTCCGCCGTTTACCGAAAAAGAAGTCTT......................................................... 28 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0
...........ATAGCACTTTGGAAGA..................................................................................................................................... 16 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0
..TACGTAAACATAGCACTTTGGAA....................................................................................................................................... 23 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
TCTACGTAAACATAGCACTTTGGAAG...................................................................................................................................... 26 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0
......................................TTCTTCAATCCGAACGGTAACCGACAAAA............................................................................................. 29 0 3 3.00 9 4 0 0 2 3 0 0 0 0 0
.......AAACATAGCACTTTGGAAGATGCT................................................................................................................................. 24 0 1 3.00 3 1 0 2 0 0 0 0 0 0 0
......................................TTCTTCAATCCGAACGGTAACCGACAAAAC............................................................................................ 30 0 3 3.00 9 2 4 0 0 3 0 0 0 0 0
............................................AATCCGAACGGTAACCGACAAAACTCA......................................................................................... 27 0 4 3.00 12 0 3 4 3 2 0 0 0 0 0
...ACGTAAACATAGCACTTTGGAAGATGC.................................................................................................................................. 27 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0
....CGTAAACATAGCACTTTGGAAGATGCT................................................................................................................................. 27 0 1 3.00 3 0 2 1 0 0 0 0 0 0 0
.......................................................TAACCGACAAAACTCATACTTTCCG................................................................................ 25 0 3 3.00 9 2 2 0 5 0 0 0 0 0 0
................................................CGAACGGTAACCGACAAAACTCATACT..................................................................................... 27 0 4 2.75 11 3 3 0 1 4 0 0 0 0 0
..............................................................................................................TCATGTTCGGCCAAGTATATCTGGT......................... 25 0 3 2.67 8 1 4 2 0 1 0 0 0 0 0
.......................................TCTTCAATCCGAACGGTAACCGACA................................................................................................ 25 0 4 2.50 10 2 3 0 4 1 0 0 0 0 0
............................................................GACAAAACTCATACTTTCCGCCGTT........................................................................... 25 0 3 2.33 7 1 4 0 1 0 1 0 0 0 0
......TAAACATAGCACTTTGGAAG...................................................................................................................................... 20 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0
..............................................................................................................TCATGTTCGGCCAAGTATATCTGG.......................... 24 0 3 2.00 6 1 3 0 0 1 1 0 0 0 0
.............................................................................................AAGAAGTCTTTTCACGGTCATGTT........................................... 24 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
...............................................................................................GAAGTCTTTTCACGGTCATGTTCGGCC...................................... 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
......TAAACATAGCACTTTGGAAGA..................................................................................................................................... 21 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0
...................................................................................TTTACCGAAAAAGAAGTCTTTTCACGG.................................................. 27 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0
............................................................................TCCGCCTTTTACCGAAAAAGAAGTCTTT........................................................ 28 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
...................TTGGAAGATGCTTCCCGCATTC....................................................................................................................... 22 0 7 2.00 14 0 0 12 1 0 1 0 0 0 0
............TAGCACTTTGGAAGATGCTTCCCGCATTC....................................................................................................................... 29 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
TCTACGTAAACATAGCACTTTGGAAGATG................................................................................................................................... 29 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.............AGCACTTTGGAAGATGCTTCCCGCATTC....................................................................................................................... 28 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0
......................................TTCTTCAATCCGAACGGTAACCGAC................................................................................................. 25 0 3 2.00 6 2 0 1 3 0 0 0 0 0 0
.................................................................................................AGTCTTTTCACGGTCATGTTCGGCCAAG................................... 28 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0
............TAGCACTTTGGAAGATGCTTCCCGC........................................................................................................................... 25 0 1 2.00 2 0 0 1 0 0 1 0 0 0 0
............................................................................TCCGCCGTTTACCGAAAAAGAAGTCTTTT....................................................... 29 0 1 2.00 2 0 1 0 0 0 1 0 0 0 0
........................................................................................................TCACGGTCATGTTCGGCCAAGTA................................. 23 0 3 2.00 6 2 0 0 1 3 0 0 0 0 0
......TAAACATAGCACTTTGGAAGATG................................................................................................................................... 23 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0
......................................TTCTTCAATCCGAACGGTAACCGACAAA.............................................................................................. 28 0 3 2.00 6 0 3 0 2 1 0 0 0 0 0
..TACGTAAACATAGCACTTTGG......................................................................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.................................................GAACGGTAACCGACAAAACTCATACTT.................................................................................... 27 0 3 2.00 6 2 2 0 0 1 1 0 0 0 0
............................................................................................AAAGAAGTCTTTTCACGGTCATGTTC.......................................... 26 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
...............................................................................................................................TATCTGGTGATAGCCGGA............... 18 0 4 1.75 7 0 0 7 0 0 0 0 0 0 0
.......................................................................................................TTCACGGTCATGTTCGGCCAAGTATA............................... 26 0 3 1.67 5 2 0 2 1 0 0 0 0 0 0
..............................TTCCCGCATTCTTCAATCCGAACGG......................................................................................................... 25 0 4 1.50 6 0 1 0 1 0 0 0 0 4 0
...............................................................................................................CATGTTCGGCCAAGTATATCTGGTG........................ 25 0 4 1.50 6 0 1 0 1 1 0 0 3 0 0
.....................................................................CATACTTTCCGCCGTTTACCGAAAAAGA............................................................... 28 0 4 1.50 6 2 0 0 2 2 0 0 0 0 0
..............................................................................................................TCATGTTCGGCCAAGTATATCTGGTG........................ 26 0 3 1.33 4 0 1 0 1 2 0 0 0 0 0
.................................................................AACTCATACTTTCCGCCGTTTACCGAA.................................................................... 27 0 3 1.33 4 1 1 0 1 0 1 0 0 0 0
.....................................................................................................TTTTCACGGTCATGTTCGGCCAAGTA................................. 26 0 3 1.33 4 1 2 0 1 0 0 0 0 0 0
....................................................CGGTAACCGACAAAACTCATACTT.................................................................................... 24 0 3 1.33 4 2 0 0 2 0 0 0 0 0 0
.......................................................TAACCGACAAAACTCATACTTTCCGCCG............................................................................. 28 0 3 1.33 4 0 4 0 0 0 0 0 0 0 0
.......................................TCTTCAATCCGAACGGTAACCGACAAAAC............................................................................................ 29 0 4 1.25 5 0 3 0 1 0 0 0 1 0 0
................................................CGAACGGTAACCGACAAAACTCATAC...................................................................................... 26 0 4 1.25 5 1 3 0 1 0 0 0 0 0 0
...........................................CAATCCGAACGGTAACCGACAAAACTCA......................................................................................... 28 0 4 1.25 5 2 0 1 1 1 0 0 0 0 0
.............................................ATCCGAACGGTAACCGACAAAACTCA......................................................................................... 26 0 4 1.00 4 2 0 2 0 0 0 0 0 0 0
..TACGTAAACATAGCACTTTGTAAG...................................................................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................AAAGAAGTCTTTTCACGG.................................................. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........ATAGCACTTTGGAAGATGCTTCCCGCA.......................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................TACCGAAAAAGAAGTCTTTT....................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................TACTTTCCGCCGTTTACCGAAAAAGAAG............................................................. 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
....................................................................................TTACCGAAAAAGAAGTCTTT........................................................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
............................................................................TCCGCCGTTTAACGAAAAAGAAGTCTT......................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..TACGTAAACATAGCACTTTGGAAGGTGC.................................................................................................................................. 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...ACGTAAACATAGCACTTTGGAAGATGCT................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................GCCGTTTACCGAAAAAGAAGTCTT......................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..........................................................................TTTCCGCCGTTTACCGAAAAAGAAG............................................................. 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
........AACATAGCACTTTGGAAGA..................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......TAGACATAGCACTTTGGAAGATGCT................................................................................................................................. 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..........CATAGCACTTTGGAAGA..................................................................................................................................... 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....CGTAAACATAGCACTTTGGAAGATG................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................ACAAAACTCATACTTTCCGCCGTT........................................................................... 24 0 3 1.00 3 0 0 1 0 0 0 0 2 0 0
.............................................................................CCGCCGTTTACCGAAAAATAAGTCTT......................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............GCACTTTGGAAGATGCT................................................................................................................................. 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................GAAGTCTTTTCACGGTCATGTTCGG........................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................TCCGCGTTTACCGAAAAAGAAGTCTT......................................................... 26 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................TACTTTCCGCCGTTTACCGAAAAAGAA.............................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..TACGTAAACATAGCACTTTGGAAGAT.................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.CTACGTAAACATAGCACTTTGGAAGATGC.................................................................................................................................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......TAAACATAGCACTTTGGAAGATGCG................................................................................................................................. 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......TAAACATAGCACTTTGGGAGATGCT................................................................................................................................. 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......TAAACATAGCACTTTGGAAGG..................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............AGCACTTTGGAAGATGCT................................................................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....CGTAAACATAGCACTTTGGAGGATGC.................................................................................................................................. 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........AACATAGCACTTTGGAAGATGCTTC............................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................TCCGAACGGTAACCGACAAAACTCATAC...................................................................................... 28 0 4 1.00 4 0 3 0 1 0 0 0 0 0 0
..GACGTAAACATAGCACTTTGGAAGATGC.................................................................................................................................. 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............GCACTTTGGAAGATGC.................................................................................................................................. 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
TCTACGTAAACATAGCACTTTGG......................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................TCCGCCGTTTACCGAAAAAGAAGT............................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................TTTCCGCCGTTTACCGAAAAAGAAGTC........................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.................................................................................CGTTTACCGAAAAAGAAGTCTTT........................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............TAGCACTTTGGAAGATGCTTCCCGCA.......................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
TCTACGTAAGCATAGCACTTTGGAAGA..................................................................................................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............TAGCACTTTGGAAGA..................................................................................................................................... 15 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..TACGTAAACATAGCACTT............................................................................................................................................ 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........................................CAATCCGAACGGTAACCGACAA............................................................................................... 22 0 4 1.00 4 0 0 0 0 0 0 4 0 0 0
....................................................................................TTACCGAAAAAGAAGTCT.......................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........ACATAGCACTCTGGAA....................................................................................................................................... 16 1 2 1.00 2 0 0 0 0 2 0 0 0 0 0
...............................TCCCGCATTCTTCAATCCGAACGG......................................................................................................... 24 0 4 1.00 4 0 0 0 0 0 0 4 0 0 0
.............................................................................................AAGAAGTCTTTTCACGGTCATGTTC.......................................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.............................................................................................AAGAAGTCTTTTCACGGTCATGTTCGGCC...................................... 29 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.......................................................TAACCGACAAAACTCATACTTTCC................................................................................. 24 0 3 1.00 3 1 0 0 2 0 0 0 0 0 0
...........................................................CGACAAAACTCATACTTTCCGCCGTT........................................................................... 26 0 3 1.00 3 0 1 0 1 0 1 0 0 0 0
..............................................................................................AGAAGTCTTTTCACGGTCATGTTCGGCCAAG................................... 31 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................AGAAGTCTTTTCACGGT................................................. 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...................................................................................TTTACCGAAAAAGAAGTCTTTTCACGGT................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................ACTTTGGAAGATGCTT................................................................................................................................ 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..........................................................................TTTCCGCCGTTTACCGAAAAAGAAGTCTTT........................................................ 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........CATAGCACTTTGGAAGATGCTTCCCGCA.......................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..TACGTAAACAGAGCACTTTGGAAGATG................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....GTAAACATAGCACTTTGGAAGATGCT................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........................................TTCAATCCGAACGGTAACCGACAAAA............................................................................................. 26 0 4 1.00 4 2 1 0 0 1 0 0 0 0 0
.............................................................................................................................TATATCTGGTGATAGCCGGACTTTAGA........ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................TCAATCCGAACGGTAACCGACAA............................................................................................... 23 0 4 1.00 4 0 0 0 0 0 0 4 0 0 0
............................................................................................AAAGAAGTCTTTTCACGGTCATGTTCGG........................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............CACTTTGGAAGATGCTTCCCCCATTC....................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................TCACGGTCATGTTCGGCCAAGT.................................. 22 0 3 1.00 3 2 1 0 0 0 0 0 0 0 0
......................................TTCTTCAATCCGAACGGTAACCGA.................................................................................................. 24 0 3 1.00 3 0 2 0 0 1 0 0 0 0 0
.CTACGTAAACATAGCACT............................................................................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................................CTCCGTTTACCGAAAAAGAAGTCTTT........................................................ 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................CTAACGGTAACCGACAAAACTCATACTT.................................................................................... 28 1 3 1.00 3 1 1 0 0 0 0 0 1 0 0
............................................................................TCCGTCGTTTACCGAAAAAGAAGTCTTT........................................................ 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......AAACATAGCACTTTGGAAGATGCTTC............................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......TAAACATAGCACTTTGGAAGAA.................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................TAACCGACAAAACTCATACTTTCCGCCGTT........................................................................... 30 0 2 1.00 2 0 2 0 0 0 0 0 0 0 0
................................................................AAACTCATACTTTCCGCCGTTTACCGAA.................................................................... 28 0 3 1.00 3 1 0 0 1 1 0 0 0 0 0
.CTACGTAAACATAGCACTTTGGAAGA..................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.......AAACATAGCACTTTGGAAGATG................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..TACGTATACATAGCACTTTGGAAG...................................................................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................TCTTTTCACGGTCATGTTC.......................................... 19 0 3 1.00 3 0 0 0 0 0 0 0 0 3 0
...................................................................................................................................TGGTGATAGCCGGACTTTAGATCTAA... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................GCCGTTTACCGAAAAAGAAGTCTTT........................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................GTTTACCGAAAAAGAAGTCTTT........................................................ 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
........AACATAGCACTTTGGAAGATGCTTCCCGCA.......................................................................................................................... 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................TACCGAAAAAGAAGTCTT......................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................................................TCCGCCGTTTGCCGAAAAAGAAGTCTTT........................................................ 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................TCCGCCGTTTACCGAAAAAGAA.............................................................. 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
..TACGTAAACATAGCACTTTGGAAGGTGCT................................................................................................................................. 29 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................AGAAGTCTTTTCACGGTCATGTTC.......................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................ACTTTGGAAGATGCTTCCCGCATTCTT..................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................................................TCCGCCGTTTACCGAAAAAGAATTCTT......................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................CCGCCGTTTACCGAAAAAGAAGTCTTT........................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........ATAGCACTTTGGAAGATGCTT................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
....................................................................................TTACCGAAAAAGAAGTCTTTTCACGG.................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........................................TTCAATCCGAACGGTAACCGACAAAACT........................................................................................... 28 0 4 1.00 4 2 2 0 0 0 0 0 0 0 0
.......................................TCTTCAATCCGAACGGTAACCGACAAAA............................................................................................. 28 0 4 0.75 3 1 2 0 0 0 0 0 0 0 0
............................................AATCCGAACGGTAACCGACA................................................................................................ 20 0 4 0.75 3 0 0 3 0 0 0 0 0 0 0
...............................................................................................................CATGTTCGGCCAAGTATATCTGG.......................... 23 0 4 0.75 3 2 1 0 0 0 0 0 0 0 0
....................................................................TCATACTTTCCGCCGTTTACCGA..................................................................... 23 0 4 0.75 3 0 1 0 1 1 0 0 0 0 0
...............................................CCGAACGGTAACCGACAAAACTCA......................................................................................... 24 0 4 0.75 3 1 2 0 0 0 0 0 0 0 0
....................................................................TCATACTTTCCGCCGTTTACCGAAA................................................................... 25 0 4 0.75 3 1 1 0 0 1 0 0 0 0 0
..........................................TCAATCCGAACGGTAACCGACAAAACTCA......................................................................................... 29 0 4 0.75 3 0 2 0 0 0 1 0 0 0 0
...................TTGGAAGATGCTTCCCGCATTCT...................................................................................................................... 23 0 7 0.71 5 0 0 5 0 0 0 0 0 0 0
...................................................................................................TCTTTTCACGGTCATGTTCGG........................................ 21 0 3 0.67 2 0 0 0 0 2 0 0 0 0 0
..................................CGCATTCTTCAATCCGAACGGTAAATA................................................................................................... 27 3 3 0.67 2 0 2 0 0 0 0 0 0 0 0
......................................TTCTTCAATCCGAACGGTAACCGATA................................................................................................ 26 1 3 0.67 2 1 0 0 1 0 0 0 0 0 0
...................................................................................................TCTTTTCACGGTCATGTTCGGCCAAG................................... 26 0 3 0.67 2 1 0 0 1 0 0 0 0 0 0
................................................CGAACGGTAACCGACAAAACTCATACTTT................................................................................... 29 0 3 0.67 2 0 1 0 0 1 0 0 0 0 0
.....................................ATTCTTCAATCCGAACGGTAACCGACAA............................................................................................... 28 0 3 0.67 2 0 0 0 2 0 0 0 0 0 0
.................................................................AACTCATACTTTCCGCCGTTTACCGA..................................................................... 26 0 3 0.67 2 1 0 0 1 0 0 0 0 0 0
.....................................ATTCTTCAATCCGAACGGTAACCGACA................................................................................................ 27 0 3 0.67 2 0 0 0 2 0 0 0 0 0 0
.....................................................................................................TTTTCACGGTCATGTTCGGCCAAGTATA............................... 28 0 3 0.67 2 1 0 0 1 0 0 0 0 0 0
......................................TTCTTCAATCCGAACGGTAACCGACT................................................................................................ 26 1 3 0.67 2 1 1 0 0 0 0 0 0 0 0
.................................................................AACTCATACTTTCCGCCGTTTACCGAAAA.................................................................. 29 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0
................................................................AAACTCATACTTTCCGCCGTTTACCGAAAA.................................................................. 30 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0
........................................................AACCGACAAAACTCATACTTTCCGC............................................................................... 25 0 3 0.67 2 1 0 0 1 0 0 0 0 0 0
......................................TTCTTCAATCCGAACGGTAACCGATT................................................................................................ 26 2 3 0.67 2 1 1 0 0 0 0 0 0 0 0
..................................................AACGGTAACCGACAAAACTCATACTT.................................................................................... 26 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0
...................................................................................................TCTTTTCACGGTCATGTT........................................... 18 0 3 0.67 2 0 0 0 0 2 0 0 0 0 0
.......................................................................................................TTCACGGTCATGTTCGGC....................................... 18 0 3 0.67 2 1 0 1 0 0 0 0 0 0 0
...................................................................................................TCTTTTCACGGTCATGTTCGGC....................................... 22 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0
..................TTTGGAAGATGCTTCCCGCATTC....................................................................................................................... 23 0 7 0.57 4 0 1 1 0 2 0 0 0 0 0
....................TGGAAGATGCTTCCCGCATTCTTC.................................................................................................................... 24 0 7 0.57 4 0 0 1 0 0 3 0 0 0 0
.......................................................................TACTTTCCGCCGTTTACCGA..................................................................... 20 0 4 0.50 2 1 0 0 0 1 0 0 0 0 0
.......................................................TAACCGACAAAACTCATACTTTCCGCCGT............................................................................ 29 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0
.......................................TCTTCAATCCGAACGGTAACCGA.................................................................................................. 23 0 4 0.50 2 1 0 0 0 0 1 0 0 0 0
.........................................TTCAATCCGAACGGTAACCGACAAAACTCA......................................................................................... 30 0 4 0.50 2 1 0 0 0 1 0 0 0 0 0
........................................CTTCAATCCGAACGGTAACCGACAAAAC............................................................................................ 28 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0
....................................................................TCATACTTTCCGCCGTTTACCGAAAAAGA............................................................... 29 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.......................................................................TACTTTCCGCCGTTTAATTAAA................................................................... 22 3 4 0.50 2 0 0 0 0 2 0 0 0 0 0
..............................................TCCGAACGGTAACCGACAAAACTCAT........................................................................................ 26 0 4 0.50 2 0 1 1 0 0 0 0 0 0 0
............................................................................TACGCCGTTTACCGAAAAGGAA.............................................................. 22 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0
.................................................................................................................TGTTCGGCCAAGTATATCTGGT......................... 22 0 4 0.50 2 0 1 0 1 0 0 0 0 0 0
..............................................TCCGAACGGTAACCGACAAAACTCAA........................................................................................ 26 1 4 0.50 2 1 0 0 0 0 1 0 0 0 0
.........................................................ACCGACAAAACTCATACTTTCCGCCGT............................................................................ 27 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................TAGCCGGACTTTAGATCTAACGT 23 0 4 0.50 2 0 1 0 1 0 0 0 0 0 0
................................................CGAACGGTAACCGACAAAACTCATA....................................................................................... 25 0 4 0.50 2 1 1 0 0 0 0 0 0 0 0
....................................................................TCATACTTTCCGCCGTTTACCGAA.................................................................... 24 0 4 0.50 2 0 1 0 1 0 0 0 0 0 0
..................TTTGGAAGATGCTTCCCGCATTCT...................................................................................................................... 24 0 7 0.43 3 0 0 1 0 1 1 0 0 0 0
...................TTGGAAGATGCTTCCCGCAT......................................................................................................................... 20 0 7 0.43 3 0 0 3 0 0 0 0 0 0 0
......................................TTCTTCAATCCGAACGGTAACT.................................................................................................... 22 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................................TTCACGGTCATGTTCGGCCAA.................................... 21 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0
..............................................................CAAAACTCATACTTTCCGCCGTTTAC........................................................................ 26 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0
.........................................................ACCGACAAAACTCATACTTTCCGC............................................................................... 24 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
..............................TTCCCGCATTCTTCAATCCGAACGGTA....................................................................................................... 27 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0
................................................................AAACTCATACTTTCCGTCGTTTACCGAA.................................................................... 28 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0
..............................................................CAAAACTCATACTTTCCGCCGTTTACCGA..................................................................... 29 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................TCACGGTCATGTTCGGC....................................... 17 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.......................................................TAACCGACAAAACTCATACTTTCCGTCTA............................................................................ 29 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0
......................................TTCTTCAATCCGAACGGTAACCGAA................................................................................................. 25 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................TAACCGACAAAACTCATACTT.................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
....................................CATTCTTCAATCCGAACGGTAACCGA.................................................................................................. 26 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
..................................................................ACTCATACTTTCCGCCGTTTACCGAA.................................................................... 26 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0
...................................................................................................TCTTTTCACGGTCATGTTCGGCC...................................... 23 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0
....................................................................................................CTTTTCACGGTCATGTT........................................... 17 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................TTTCACGGTCATGTTCGGCCAAGTA................................. 25 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
...............................................................AAAACTCATACTTTCCGCCGTTTACCGA..................................................................... 28 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................CACGGTCATGTTCGGCC...................................... 17 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
..............GAACTTTGGAAGATGCT................................................................................................................................. 17 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................GATGTCTTTTCACGGTCATGTTCGGC....................................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
................................................................AAACTCATACTTTCCGCCGTTTACC....................................................................... 25 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0
................................................................AAACTCATACTTTCCGCCGTTTA......................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..............................TTCCCGCATTCTTCAATCCGAACGGT........................................................................................................ 26 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................TTCACGGTCATGTTCGGCC...................................... 19 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
............................................AATCCGAACGGTAACCGACAAAACTCATACTT.................................................................................... 32 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................TCTTTTCACGGTCATGTTCGGCCA..................................... 24 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.......................................................TAACCGACAAAACTCACACTTTCCG................................................................................ 25 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0
..............................................................CAAAACTCATACTTTCCGCCGTTTACCGAA.................................................................... 30 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..................................CGCATTCTTCAATCCGAACGGTAATCGA.................................................................................................. 28 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0
.......................................................................................................TTCACGTTCATGTTCGGCCAAGTATA............................... 26 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0
......................................TTCTTCAATCCGAACGGAAACCGACA................................................................................................ 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
......................................TTCTTCAATCAGAACGGTAACCGACAAA.............................................................................................. 28 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0
.......................................................................................................TTCACGGTCATGTTCGGCCAAGT.................................. 23 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................TTCACGGTCATGTTCGGCCAAG................................... 22 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0
..................................CGCATTCTTCAATCCGAACGGTAACCGACA................................................................................................ 30 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0
..................................CGCATTCTTCAATCCGAACGGTAACC.................................................................................................... 26 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0
..................................................................ACTCATACTTTCCGCCGTTTACC....................................................................... 23 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
..................................................................ACTCATACTTTCCGCCGTTTACCGA..................................................................... 25 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
..................................CGCATTCTTCAATCCGAACGGTAACCGACAA............................................................................................... 31 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0
..............................................................CAAAACTCATACTTTCCGCCGTT........................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
................................................................AAACTCATACTTTCCGCCGTTTACCG...................................................................... 26 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0
.......................................................TAACCGATAAAACTCATACTTTCCGCC.............................................................................. 27 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0
...................................GCATTCTTCAATCCGAACGGTAACCGAC................................................................................................. 28 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0
........................................................................................................TCACGGTCATGTTCGGCCAAGTATA............................... 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..................................................................ACTCATACTTTCCGCCGTTTA......................................................................... 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................TTCACGGTAATGTTCGGCCAAGTA................................. 24 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0
..............................................................CAAAACTCATACTTTCCGCCGTTTA......................................................................... 25 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0
.............................................ATCCGAACGGTAACCGACAAAACTCATACTT.................................................................................... 31 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................TTTTCACGGTCATGTTCGGCCAAG................................... 24 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0
........................................................AACCGACAAAACTCATACTTTCCGCC.............................................................................. 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...........................TGCTTCCCGCATTCTTCAATCCGAACGT......................................................................................................... 28 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0
..................................................................ACTCATACTTTCCGCCGTTTACCGT..................................................................... 25 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0
......................................TTCTTCAATCCAAACGGTAACCGACAA............................................................................................... 27 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0
...................................................................................................TCTTTTCACGGTCATGTTCGGCCAAGTA................................. 28 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0
........................................................................................................TCACGGTCATGTTCGGCCAAGTATAT.............................. 26 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
......................................TTCTTCAATCCGAACGGTAACC.................................................................................................... 22 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0
................................................CCAACGGTAACCGACAAAACTCATACTT.................................................................................... 28 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................CGGTCATGTTCGGCCAAGTATATCTGG.......................... 27 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0
................................................CGAACGGTAACCGACAAAACTCGTACTT.................................................................................... 28 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..............................................................................CGCCGTTTACCGAAAAAGA............................................................... 19 0 6 0.33 2 0 0 1 1 0 0 0 0 0 0
...................................................................................................TCTTTTCACGGTCATGTTA.......................................... 19 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0
............................................................GACAAAACTCATACTTTCCGCCGTTTA......................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................TTCACGGTCATGTTCGGCCAAGTGCCT.............................. 27 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0
................................................................AAACTCATACTTTCCGCCGTTTACCAAA.................................................................... 28 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
......................................TTGTTCAATCCGAACGGTAACCGACA................................................................................................ 26 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 chr3h_Mrandom_054:918-1077 + dsi_248 ACG-TTAGATCTAAAGTCCGGCTATCACCAGATATACTT-GGCCGAACATGACCGTGAAAAGACTTCTTTTTCGGTAAACGGCGGAAAGTATGAGTTTTGTCGG-TTACCGTTCGGATTGAAGAATGCGGGAAGCATCTTCCAAAGTGCTAT----------------------------------------GTTTACGTAGA
droSec2 scaffold_484:712-862 + ACG-TTAGGTCTAAAGTCCGGCTACCACCAGATATACTTGGGCCGAACATGACCGTGAAAAGACCTCTTTTTCGGTAAACGGCGGAAAGTATGAGTTTTGTCGG-TTAC-GTTCGGATTGA-GAATGCGGGAAGCATCTTCCAAAGAGCGATCGA------------------------------------------------
dm3 chrU:3553660-3553859 - ACG-TTAGATCTAAAGTCCGGCTACCACCAGATATACTT-GGCCGAACATGACCGTGAAAAGACCTCTTTTTCGGTAAACGGCGGAAAGTATGAGTTTTGTCGG-TTACCGTTCGGATTGAAGAATGCGGGAAGCATCTTCCAAAGAGCGATCGACGACGTCCTACGAGAGCAAATTGGCAAATCGTGCTATGTTTACGTAGA
droEre2 scaffold_583:864-1015 + ACG-TTAGATTTGAAGTCCGGCTACCACCAGATATACTT-GGCCGAACACGACCGTGAAAAGACCTCATTTTCGGTGAACGGCGGAAAGTATGAATTTTGTCGA-TTACCGTTCGGGTTGAAGAATGCGGGAAGCATCTTCCAAAGAGCGATCGA------------------------------------------------
droYak3 v2_chrUn_912:12775-12921 + AAACTTAGATTTGAAGTCCGGCTACCACC---TATACTT-GGCCGAACATGACCGTGAAAAGACCTCCTTTTCGGTGAACGGCGGAAAGTACGAATTTTGTCGA-TTACCGTTTGGGTTGAAAAATGCGGGAAGCATCTTCCAAACAGCGAT---------------------------------------------------
droEug1 scf7180000409013:2604-2754 + ACC-CTAGACTTAAAATCGGGGTACCACCAGATTTATCT-GGCTGAAAAAGACCGTGAAAA-ACGGCTTTCTCCATAAAGGGAGGAAAGTATGAATTATGCCGT-CTACCCTTTGGACTGAAAAATGCGCGAAGCATCTTTCAAAGGGCAATTGA------------------------------------------------
droBia1 scf7180000301302:10121-10278 + ACA-CTAGACCTGAAGTCAGGCTACCACCAGATAACTCT-GGCGGAACGTGATCGCGAAAAGACCTCGTTTTCTGTAAATGGAGGCAAGTACGAGTTTTGTAGG-CTCCCGTTCTGTCTAATGAACGCGGAAAGCATCTTCCAAAGAAGACACGTTGACGT------------------------------------------
droTak1 scf7180000415879:71032-71183 - ACC-CTAGACTTGAAGTCAGGGTATCATCAGATATACTT-GGCCGAGAAAGACCGGGAAAAAACCTCGTTCTCAGTTAACGGAGGAAAATACGAATTTTGTCGA-CTACCTTTCGGATTAAAAAACGCAGGTAGCATATTCCAAAGAGCCATCGA------------------------------------------------
droEle1 scf7180000491070:1525-1692 - ACC-CTAGACTTAAAATCGGGGTACCACCAGATTTATCT-GGCAGAAAAAGACCGTGAAAAAACTGTTTTCTCCATAAACGGAGGAAAGTATGAATTTTGCCGT-CTACCCTTTGGACTGAAAAAGGCGGGAAGCATCTTTCAAAAGGCGATCGACGACGTTCT--------------------------------ACGTGAA
droRho1 scf7180000777454:28-176 - ACA-ATCGATTTGAAGTCTGGCTACCACCAGATCACTCT-GGCAGAGCGTGACCGTGAAAA-ACTTCCTTTTCCGTTAACGGAGGAAAGTACGAGTTTCGCCGGTCTACCGTTTGGTTTGAAGAATGCTGCCAGCATCTTCCAAAGAACCAT---------------------------------------------------
droFic1 scf7180000451861:8459-8617 + ACT-CTAAACTGAAAATCCGGCTATCACCAAATTTTCCT-CGCGGAGAAAGATCTCGAAAAAACCTAATTTTCAGTTAACGGAGGCAAGTATGAATTCTGCCTT-TTGCTTTTTGGATTAAAAAATGCTGGTATCATTTTTCAAAGGGCAATCGATTACGTA-----------------------------------------
droKik1 scf7180000299944:294-442 + ACC-CTAGACTTGAAGTCGGTGTACCACCAAATATACCT-GGCTGAAAAGGACCGAAAGAAGACCTCGTTCTCAGTTAATGGTGGGAAATACGAGTTCTGCCGA-CTACCATTCGGTCTGAAAAATGCAGGGAGTATCTTCCAAAGAGCCAT---------------------------------------------------
droAna3 scaffold_13417:4759948-4760111 + ATG-ATTGATTTGAAGTCTGGCTATTAACTAATTATACT-GGCAGAGCGTGACGGTGAAAAAACTTCCTTTTCCGTTAACGGAGGAAAATATGAGTTTCGCCGA-CTGCCATTCGGATTGAGGAATGCTGCCAGCATCTTCCAAAGAACCATCGACGACATACT------------------------------------GGA
droBip1 scf7180000392337:63-211 - ACG-CTCGATTTAAAGTCCGGCTACCACCAAATTATTCT-GGCAGAACGTGACCGTGAGAAAACTTCCTTTTCCGTAAACGGGGGAAAATACGAGTTCCGTCGA-CTGCCATTCGGGTTAAGAAATGCTGCCAGCATCTTCCAAAGAACCAT---------------------------------------------------
dp5 Unknown_singleton_1494:11153-11304 - ACC-CTCGACTTAAAGTCTGGGTACCACCAAATCTACCT-TGCGGAGCATGACCGCGAAAAGACTTCGTTTTCAGTAAGCAGCGGCAAGTACTAGTTCTGTCGG-CTTCCGTTTGGCCTGCGCAATGCAAGCAGCATATTCCAAAGGGCAATAGA------------------------------------------------
droPer2 scaffold_81:98291-98490 + ACA-TTAGATCTAAAGTCCGGCTATCACCAAATTTATCT-AGCAGAACAGGATCGCGAGAAGACGGCCTTTTCCGTAAACGGCGGAAAGTACGAATTCTGCAGA-CTACCGTTCGGGTTGAAGAATGCGGGAAGCATCTTCCAAAGAGCGATAGACGACGTACTGCATGAACAGATTGGCAAAACTTGCTATGTCTACGTAGA
droWil2 scf2_1100000004955:147584-147732 + ACA-TTAGATCTTAAATCCGGGTACCACCAGATCTACCT-GGCGGAGGGCGATCGGGAAAAGACGTCCTTCTCAGTAAATGGCGGAAAGTACGAGTTCTGTCGA-CTACCTTTTGGTTTAAAAAATGCCGGTAGCATTATTCAAAGAGCAAT---------------------------------------------------
droVir3 scaffold_13050:1324920-1325085 + ACA-TTGGACCTAAAATCCGGCTATCACCAGATCACGCT-AGCAGAGCGTGACCGTGAAAAAACAGCCTTTGCAGTTAACGGGGGGAAGTACGAATTTTGTCGA-CTTCCCTTTGGGTTGAAGAATGCGGCCAGCATCTTCCAAAGAACTGTTG----------------------------------CTATGTCTACGTTGA
droMoj3 scaffold_6401:40872-41071 + ACT-CTGGACCTTAAATCCGGCTATCACCAGATTTTTCT-CGCTGAACAAGACCGTGAAAAAACATCTTTCTCTGTAAATGGAGGAAAGTATGAATTTTGTCGA-TTGCCGTTCGGGTTGAAGAATGCTGGAAGCATCTTCCAAAGAGCGATTGATGACGTACTGCGTGAACAAATTGGCAAAACATGCTATGTGTACGTAGA
droGri2 scaffold_14822:260863-261027 - GTG-CTAGATTTGAAGAGCGGATTCCATCAAATCCCCCT-CAAAGCAAAAGACATAGAAAAGACTGCATTCGCAGTTAACGGCGGAAAATACGAATTCACCAGA-CTTCCGTTTGGACTAAAAAATTCTCCATCAATATTCCAACGACATTT-----------------------------------GTTACGTCTACATCGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
ACG-TTAGATCTAAAGTCCGGCTATCACCAGATATACTT-GGCCGAACATGACCGTGAAAAGACTTCTTTTTCGGTAAACGGCGGAAAGTATGAGTTTTGTCGG-TTACCGTTCGGATTGAAGAATGCGGGAAGCATCTTCCAAAGTGCTAT----------------------------------------GTTTACGTAGASizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
................................................................................................................TCGGATTGAAGAATGCGGGAAGCATC.................................................................263167.335020009100862200336939
.................................................................................................................CGGATTGAAGAATGCGGGAAGCATC.................................................................25359.0017700019002277791528
......................................................................................AAGTATGAGTTTTGTCGG-TTACCGT...........................................................................................25344.00132000180070103985
................................................................................................................TCGGATTGAAGAATGCGGGAAGCAT..................................................................25320.676200000008327141
......................................................................................AAGTATGAGTTTTGTCGG-TTACCGTT..........................................................................................26320.33610005007040342
.................................................................................................TTGTCGG-TTACCGTTCGGATTGAAGAA..............................................................................27318.335500000001132462
.........................................................................................TATGAGTTTTGTCGG-TTACCGTTCGGA......................................................................................27418.00720000000272113101
...........................................................................................TGAGTTTTGTCGG-TTACCGTTCGGA......................................................................................25417.7571000000025191755
................................................................................................................TCGGATTGAAGAATGCGGGAAGCATCTT...............................................................28316.334900000011030332
..................................................................................................TGTCGG-TTACCGTTCGGATTGAAGAA..............................................................................26311.67350001000941560
.................................................................................................TTGTCGG-TTACCGTTCGGATTGAAGA...............................................................................2649.00360000000623340
.................................................................................................TTGTCGG-TTACCGTTCGGATTGAA.................................................................................2448.25330000000624120
...........................................................................................TGAGTTTTGTCGG-TTACCGTTCGGAT.....................................................................................2647.0028000000058582
......................................................................................AAGTATGAGTTTTGTCGG-TTACCGTTC.........................................................................................2736.33190000003000016
..........................................................AAAGACTTCTTTTTCGGTAAACGGC........................................................................................................................2516.006000000030030
......................................................................................AAGTATGAGTTTTGTCGG-TTACC.............................................................................................2335.6717000600000218
........................................................................................GTATGAGTTTTGTCGG-TTACCGT...........................................................................................2345.5022000000173821
.................................................................................................................CGGATTGAAGAATGCGGGAAGCAT..................................................................2435.3316000100029130
......................................................................................AAGTATGAGTTTTGTCGG-TTACCG............................................................................................2435.3316000500210017
.........................................................................................TATGAGTTTTGTCGG-TTACCGTTCGGAT.....................................................................................2845.2521000000036651
......................................................................................AAGTATGAGTTTTGTCGG-..................................................................................................1834.67140000000000014
......................................................................................AAGTATGAGTTTTGTCGG-T.................................................................................................1934.67140000000000014
.................................................................................................TTGTCGG-TTACCGTTCGGATTGA..................................................................................2344.5018000000028080
.................................................................................................................CGGATTGAAGAATGCGGGAAGCATCT................................................................2634.3313000300112132
......................................................................................AAGTATGAGTTTTGTCGG-TT................................................................................................2034.00120000001000011
..................................................................................................................GGATTGAAGAATGCGGGAAGCATC.................................................................2433.67110000000000011
................................................................................................TTTGTCGG-TTACCGTTCGGATTGAAGAA..............................................................................2833.3310000000042220
........................................................................................GTATGAGTTTTGTCGG-TTACCGTT..........................................................................................2443.2513000000050701
...........................................................................................TGAGTTTTGTCGG-TTACCGTTCGGATT....................................................................................2742.7511000000051311
..........................................................................................................TACCGTTCGGATTGAAGAATGCGGGA.......................................................................2632.337000000000403
........................................................................................GTATGAGTTTTGTCGG-TTACCGTTCGGA......................................................................................2842.259000000044100
.............................................................................................................................TGCGGGAAGCATCTTCCAAAGTGCTA....................................................2612.002000000000002
..............................................................................................GTTTTGTCGG-TTACCGT...........................................................................................1742.008000000000008
.........................................................................................TATGAGTTTTGTCGG-TTACCGTT..........................................................................................2341.757000000030112
.....................................................................................................................TTGAAGAATGCGGGAAGCATCTTC..............................................................2441.757000000000007
.....................................TT-GGCCGAACATGACCGTGAAAAGA............................................................................................................................................2531.675000000021110
.................................................................................................................CGGATTGAAGAATGCGGGAAGCATCTT...............................................................2731.675000000013010
..........................................................................................ATGAGTTTTGTCGG-TTACCGT...........................................................................................2141.506000000000006
.....................................................................................................................TTGAAGAATGCGGGAAGCATCTT...............................................................2361.509000000000009
............................................................................................GAGTTTTGTCGG-TTACCGTTCGGA......................................................................................2441.506000000031011
..................................................................................................TGTCGG-TTACCGTTCGGATTGAAGA...............................................................................2541.506000000041100
....................................................................................................................ATTGAAGAATGCGGGAAGCATC.................................................................2231.334000000000004
............................CAGATATACTT-GGCCGAACATGACCGTGA.................................................................................................................................................2931.334000000013000
......................................................................TTCGGTAAACGGCGGAAAGTATGAGT...........................................................................................................2631.334000000012001
...............................................................................................TTTTGTCGG-TTACCGTT..........................................................................................1741.255000000000005
.....................................................................................................................TTGAAGAATGCGGGAAGCATCTTCC.............................................................2541.255000000000005
.................................................................................................................CGGATTGAAGAATGCGGGAAGCA...................................................................2331.003000000021000
......................................................................................AAGTATGAGTTTTGTCG....................................................................................................1751.005000000000005
..............................GATATACTT-GGCCGAACATGACCG....................................................................................................................................................2431.003000000012000
................................TATACTT-GGCCGAACATGACCGTGA.................................................................................................................................................2531.003000000001011
...............................................................................................................TTCGGATTGAAGAATGCGGGAAGC....................................................................2431.003000000201000
................................................................................................................TCGGATTGAAGAATGCGGGAAGCA...................................................................2431.003000100000110
.................................................TGACCGTGAAAAGACTTCTTTTTCG.................................................................................................................................2511.001000000000001
.................................................................TCTTTTTCGGTAAACGGCGGAAAGTA................................................................................................................2641.004000000001012
...........................................................AAGACTTCTTTTTCGGTAAACGGC........................................................................................................................2411.001000000010000
....................................................CCGTGAAAAGACTTCTTT.....................................................................................................................................1811.001000010000000
.................................................TGACCGTGAAAAGACTTCTTTTT...................................................................................................................................2311.001000000000100
...............................................................................................TTTTGTCGG-TTACCGT...........................................................................................1641.004000000000004
................................................................................................................TCGGATTGAAGAATGC...........................................................................1650.804000000002002
.......................................................................................AGTATGAGTTTTGTCGG-TTACCGT...........................................................................................2440.753000000100110
.............................................................................................AGTTTTGTCGG-TTACCGT...........................................................................................1840.753000000000003
...........................................................................................TGAGTTTTGTCGG-TTACCGTTCGG.......................................................................................2440.753000000000210
................................................................................................TTTGTCGG-TTACCGT...........................................................................................1540.753000000000003
.........................................................................................TATGAGTTTTGTCGG-TTACCGTTCGGATT....................................................................................2940.753000000021000
................................TATACTT-GGCCGAACATGACCGT...................................................................................................................................................2330.672000000010010
...............................................................................................................TTCGGATTGAAGAATGCGGGAAGCATC.................................................................2730.672000000002000
....................................................................................................TCGG-TTACCGTTCGGATTGAAGAATGC...........................................................................2730.672000000001100
................................TATACTT-GGCCGAACATGACCGTGAA................................................................................................................................................2630.672000000010001
......................................................................................AAGTATGAGTTTTGTCGG-TTA...............................................................................................2130.672000000001001
.....................................TT-GGCCGAACATGACCGTGAAAAGAC...........................................................................................................................................2630.672000000110000
...............................................................................................................TTCGGATTGAAGAATGCGGGAAGCATCT................................................................2830.672000000010100
.................................................................................GCGGAAAGTATGAGTTTTGTCGG-TT................................................................................................2530.672000000000200
.................................................................................................TTGTCGG-TTACCGTTCGGATTGAAGAAT.............................................................................2830.672000000011000
..............................GATATACTT-GGCCGAACATGAC......................................................................................................................................................2230.672000000011000
...........................................................................TAAACGGCGGAAAGTATGAGTTTTG.......................................................................................................2530.672000000000002
................................................................................................................TCGGATTGAAGAATGCGGGAAGCATCT................................................................2730.672000000200000
.....................................................................................................CGG-TTACCGTTCGGATTGAAGAATG............................................................................2530.672000000020000
..................................................................................................TGTCGG-TTACCGTTCGGATTGAAGAATG............................................................................2830.672000000001010
..........................................................................................................TACCGTTCGGATTGAAGAA..............................................................................1930.672000000000002
..................................TACTT-GGCCGAACATGACCGTGAA................................................................................................................................................2430.672000000010001
..............................GATATACTT-GGCCGAACATGACCGTG..................................................................................................................................................2630.672000000011000
.......................................................................................................................GAAGAATGCGGGAAGCATC.................................................................19100.606000000000006
......................................................................................AAGTATGAGTTTTGT......................................................................................................1550.603000000000003
.........................................................................................TATGAGTTTTGTCGG-TTACCGT...........................................................................................2240.502000000000002
................................................................................................TTTGTCGG-TTACCGTT..........................................................................................1640.502000000000002
...............................................................................................TTTTGTCGG-TTACCGTTCGGATTGAA.................................................................................2640.502000000011000
.....................................................................................................................TTGAAGAATGCGGGAAGCATCTTCCAA...........................................................2740.502000000000002
..............................................................................................GTTTTGTCGG-TTACCGTT..........................................................................................1840.502000000000002
..........................................................................................ATGAGTTTTGTCGG-TTACCGTT..........................................................................................2240.502000000000002
.......................................................................................AGTATGAGTTTTGTCGG-TTACCGTTCGGA......................................................................................2940.502000000011000
................................................................................................................TCGGATTGAAGAATGCG..........................................................................1740.502000000000002
........................................................................................GTATGAGTTTTGTCGG-TTACCGTTC.........................................................................................2540.502000000011000
................................................................................................................TCGGATTGAAGAATGCGGG........................................................................1940.502000000000002
......................................................................................................................TGAAGAATGCGGGAAGCATCTTC..............................................................2370.433000000000003
.....................................................................................................................TTGAAGAATGCGGGAAGCATC.................................................................2170.433000000000003
........................................................................................................................AAGAATGCGGGAAGCATC.................................................................18100.404000000000004
...........................................CGAACATGACCGTGAAAAGA............................................................................................................................................2030.331000000000001
................................TATACTT-GGCCGAACATGACCGTGAAAA..............................................................................................................................................2830.331000000000010
.................................................................................GCGGAAAGTATGAGTTTTGTCGG-T.................................................................................................2430.331000000010000
............................CAGATATACTT-GGCCGAACATGAC......................................................................................................................................................2430.331000000001000
...........................................................................TAAACGGCGGAAAGTATGAGTTT.........................................................................................................2330.331000000000001
............................CAGATATACTT-GGCCGAACATGACCGT...................................................................................................................................................2730.331000000001000
...............................................................................CGGCGGAAAGTATGAGTTTTGTCGG-T.................................................................................................2630.331000000000010
...................................................................................................................GATTGAAGAATGCGGGAAGCAT..................................................................2230.331000000000001
............................................GAACATGACCGTGAAAA..............................................................................................................................................1730.331000000000001
...................................................................................GGAAAGTATGAGTTTTGTCGG-TTACCGTT..........................................................................................2930.331000000100000
...................................................................................GGAAAGTATGAGTTTTGTCGG-TT................................................................................................2330.331000000000100
...........................................................................................................ACCGTTCGGATTGAAGAATGCGGGA.......................................................................2530.331000000000001
..............................................................................................................GTTCGGATTGAAGAATGCGGGAAGCATC.................................................................2830.331000000100000
..................................TACTT-GGCCGAACATGACCGTG..................................................................................................................................................2230.331000000000100
..................................................................................................................GGATTGAAGAATGCGGGAAGCATCT................................................................2530.331000000000001
..........................................................................................................TACCGTTCGGATTGAAGAATGCGGG........................................................................2530.331000000010000
..............................GATATACTT-GGCCGAACATGACCGTGA.................................................................................................................................................2730.331000000001000
.................................................................................GCGGAAAGTATGAGTTTTGTCGG-..................................................................................................2330.331000000000100
............................CAGATATACTT-GGCCGAACATGACCGTG..................................................................................................................................................2830.331000000010000
......................................................................................................GG-TTACCGTTCGGATTGAAGAA..............................................................................2230.331000000010000
..................................................................................CGGAAAGTATGAGTTTTGTCGG-..................................................................................................2230.331000000000001
..........................................................................................................TACCGTTCGGATTGAAGAATGCGGGAA......................................................................2730.331000100000000
......................................................................................................................TGAAGAATGCGGGAAGCATCTT...............................................................2290.333000000000003
...............................ATATACTT-GGCCGAACATGACCGT...................................................................................................................................................2430.331000000000001
..................................................................................................................GGATTGAAGAATGCGGGAAGCAT..................................................................2330.331000000000001
.............................................................................................................CGTTCGGATTGAAGAATGCGGGAAGCATC.................................................................2930.331000000001000
...................................................................................................................GATTGAAGAATGCGGGAAGCATCT................................................................2430.331000000000001
......................................T-GGCCGAACATGACCGTGAAAAGA............................................................................................................................................2430.331000000001000
.............................AGATATACTT-GGCCGAACATGACCGTG..................................................................................................................................................2730.331000000010000
..........................ACCAGATATACTT-GGCCGAACATGAC......................................................................................................................................................2630.331000000010000
.....................................................................................AAAGTATGAGTTTTGTCGG-TTACC.............................................................................................2430.331000000000010
.....................................................................................................CGG-TTACCGTTCGGATTGAAGAATGC...........................................................................2630.331000000000001
...................................................................................................................GATTGAAGAATGCGGGAAGCATC.................................................................2330.331000000000001
..................................TACTT-GGCCGAACATGACCGTGAAAAGA............................................................................................................................................2830.331000000000100
................................................................................................................TCGGATTGAAGAATGCGGGAAGC....................................................................2330.331000000001000
...................................................................................................GTCGG-TTACCGTTCGGATTGAAGAA..............................................................................2530.331000000000010
..............................GATATACTT-GGCCGAACATGACCGT...................................................................................................................................................2530.331000000010000
......................................................................TTCGGTAAACGGCGGAAAGTATGAGTT..........................................................................................................2730.331000000010000
...............................................................................................TTTTGTCGG-TTACCGTTCGGATTGAAGAA..............................................................................2930.331000000010000
....................................................................................GAAAGTATGAGTTTTGTCGG-TTACCGT...........................................................................................2730.331000000000100
..................................................................................................TGTCGG-TTACCGTTCGGATTGAAGAAT.............................................................................2730.331000000010000
...............................................................................................................TTCGGATTGAAGAATGCGGGAAGCATCTT...............................................................2930.331000000000100
...............................................................................CGGCGGAAAGTATGAGTTTTGTCGG-..................................................................................................2530.331000000000001
................................TATACTT-GGCCGAACATGACCGTG..................................................................................................................................................2430.331000000000100
...........................................................................................................................AATGCGGGAAGCATC.................................................................15100.303000000000003
..........................................................................................................................GAATGCGGGAAGCATC.................................................................16100.303000000000003
.........................................................................................................................AGAATGCGGGAAGCATCTTCC.............................................................2170.292000000000002
.....................................................................................................................TTGAAGAATGCGGGAAGCATCT................................................................2270.292000000000002
......................................................................TTCGGTAAACGGCGGAAAGTATGAG............................................................................................................2540.251000000001000
...................................................................TTTTTCGGTAAACGGCGGAAAGTA................................................................................................................2440.251000000000100
.........................................................................................TATGAGTTTTGTCGG-TTACCGTTCGG.......................................................................................2640.251000000001000
........................................................................................GTATGAGTTTTGTCGG-T.................................................................................................1740.251000000000001
.................................................................................................................CGGATTGAAGAATGCGGGA.......................................................................1940.251000000000001
........................................................................................GTATGAGTTTTGTCGG-TTA...............................................................................................1940.251000000000001
.............................................................................................AGTTTTGTCGG-TTACCGTTCGGAT.....................................................................................2440.251000000000001
............................................................................................GAGTTTTGTCGG-TTAC..............................................................................................1640.251000000000001
..............................................................................................................GTTCGGATTGAAGAATGCGG.........................................................................2040.251000000000001
................................................................................................................TCGGATTGAAGAATGCGGGA.......................................................................2040.251000000000001
................................................................................................TTTGTCGG-TTACCGTTCGGATTGAAGA...............................................................................2740.251000000010000
.....................................................................................................................TTGAAGAATGCGGGAAGCATCTTCCAAA..........................................................2840.251000000001000
............................................................................................GAGTTTTGTCGG-TTACCGTT..........................................................................................2040.251000000000001
..............................................................................................GTTTTGTCGG-TTACCGTTCGGATTGAA.................................................................................2740.251000000010000
............................................................................................GAGTTTTGTCGG-TTACCG............................................................................................1840.251000000000001
................................................................................................TTTGTCGG-TTACCGTTCGGATTGA..................................................................................2440.251000000001000
.......................................................................................AGTATGAGTTTTGTCGG-TTACCGTT..........................................................................................2540.251000000000100
..........................................................................................ATGAGTTTTGTCGG-TTACC.............................................................................................1940.251000000000001
.............................................................................................AGTTTTGTCGG-TTACCGTTCGGATTG...................................................................................2640.251000000000010
...............................................................................................TTTTGTCGG-TTACCGTTC.........................................................................................1840.251000000000001
.......................................................................................AGTATGAGTTTTGTCGG-TTACCG............................................................................................2340.251000000000010
..................................................................................................TGTCGG-TTACCGTTCGGATTGAA.................................................................................2340.251000000000010
.......................................................................................AGTATGAGTTTTGTCGG-TTACCGTTC.........................................................................................2640.251000000010000
...........................................................................................TGAGTTTTGTCGG-TTACCG............................................................................................1940.251000000000001
.........................CACCAGATATACTT-GGCCGAACATG........................................................................................................................................................2540.251000000000100
................................................................................................TTTGTCGG-TTACCGTTC.........................................................................................1740.251000000000001
..............................................................................................GTTTTGTCGG-TTACC.............................................................................................1540.251000000000001
........................................................................................GTATGAGTTTTGTCGG-TTACCGTTCGGATT....................................................................................3040.251000000001000
..................................................................................................TGTCGG-TTACCGTTCGGATTGAAG................................................................................2440.251000000000001
.......GATCTAAAGTCCGGCT....................................................................................................................................................................................1640.251000000000001
.................................................................................GCGGAAAGTATGAGTTTTGTCG....................................................................................................2240.251000000000100
........................................................................................GTATGAGTTTTGTCGG-TTACCGTTCGG.......................................................................................2740.251000000010000
..............................................................................................................GTTCGGATTGAAGAATGCGGG........................................................................2140.251000000000001
.................................................................................................TTGTCGG-TTACCGTTCGGATTGAAG................................................................................2540.251000000001000
.................................................................................................................CGGATTGAAGAATGCGGGAAG.....................................................................2140.251000000000001
...............................................................................................................TTCGGATTGAAGAATGCGGGA.......................................................................2140.251000000000001
...........................................................................................TGAGTTTTGTCGG-TTACCGTTCG........................................................................................2340.251000000000010
........................................................................................GTATGAGTTTTGTCGG-TTACCG............................................................................................2240.251000000000100
.....................................................................................................CGG-TTACCGTTCGGATTGAA.................................................................................2040.251000000000001
......................................................................................................................TGAAGAATGCGGGAAGCAT..................................................................19100.202000000000002
......................................................................................AAGTATGAGTTTTGTC.....................................................................................................1650.201000000000001
......................................................................................................................TGAAGAATGCGGGAAGCATC.................................................................20100.202000000000002
.................................................................................................................CGGATTGAAGAATGC...........................................................................1550.201000000000001
.........................................................................................................................AGAATGCGGGAAGCATC.................................................................17100.202000000000002
......................................................................................................................TGAAGAATGCGGGAAGCA...................................................................18100.202000000000002
...........................................................................TAAACGGCGGAAAGTAT...............................................................................................................1750.201000000000001
..............................................................................................................GTTCGGATTGAAGAA..............................................................................1560.171000000000001
droSec2
ACG-TTAGGTCTAAAGTCCGGCTACCACCAGATATACTTGGGCCGAACATGACCGTGAAAAGACCTCTTTTTCGGTAAACGGCGGAAAGTATGAGTTTTGTCGG-TTAC-GTTCGGATTGA-GAATGCGGGAAGCATCTTCCAAAGAGCGATCGA------------------------------------------------SizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
........................................................................................GTATGAGTTTTGTCGG-TTAC-GTTCG........................................................................................2530.6720002
...........................................................................................TGAGTTTTGTCGG-TTAC-GTTCGGAT.....................................................................................2530.3310001
.............................................AACATGACCGTGAAAAGACCT.........................................................................................................................................21200.2040004
......................................................................TTCGGTAAACGGCGGAAAGTA................................................................................................................21200.1530003
...................................................................................GGAAAGTATGAGTTTTGTCGG-..................................................................................................21200.1530003
..............................................ACATGACCGTGAAAAGACCTC........................................................................................................................................21200.1020002
.............................................................................................................................TGCGGGAAGCATCTTCCAAAGAGCGAT...................................................27200.1020002
............................................GAACATGACCGTGAAAAGACC..........................................................................................................................................21200.1020002
.............................................................................AACGGCGGAAAGTATGAGTTT.........................................................................................................21200.0510001
......................................................................................AAGTATGAGTTTTGTCGG-TTA...............................................................................................21200.0511000
............................................................................AAACGGCGGAAAGTATGAGTTT.........................................................................................................22200.0510001
..............................................................................................................................GCGGGAAGCATCTTCCAAAGAGCGATC..................................................27200.0510001
....................................................................TTTTCGGTAAACGGCGGAA....................................................................................................................19200.0510001
.....................................................................................AAAGTATGAGTTTTGTCGG-TTA...............................................................................................22200.0511000
.......................................................................................AGTATGAGTTTTGTCGG-TTAC-.............................................................................................21200.0510001
....................................................................................GAAAGTATGAGTTTTGTCGG-TTAC-.............................................................................................24200.0511000
......................................................................................................................................CATCTTCCAAAGAGCGATCG.................................................20200.0510001
...........................................CGAACATGACCGTGAAAAGACC..........................................................................................................................................22200.0510001
...........................................CGAACATGACCGTGAAAAGAC...........................................................................................................................................21200.0510001
.................................................................TCTTTTTCGGTAAACGGCGG......................................................................................................................20200.0510001
..........................................CCGAACATGACCGTGAAAAGA............................................................................................................................................21200.0510001
............................................................................AAACGGCGGAAAGTATGAGTT..........................................................................................................21200.0511000
.................................................................TCTTTTTCGGTAAACGGC........................................................................................................................18200.0510100
....................................................................TTTTCGGTAAACGGCGGAAA...................................................................................................................20200.0510001
droEre2
ACG-TTAGATTTGAAGTCCGGCTACCACCAGATATACTT-GGCCGAACACGACCGTGAAAAGACCTCATTTTCGGTGAACGGCGGAAAGTATGAATTTTGTCGA-TTACCGTTCGGGTTGAAGAATGCGGGAAGCATCTTCCAAAGAGCGATCGA------------------------------------------------SizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
..............................................................................................ATTTTGTCGA-TTACCGTTCGGG......................................................................................22200.204000040
..............................................................................................ATTTTGTCGA-TTACCGTTCGGGTTG...................................................................................25200.102000020
.................................................................................GCGGAAAGTATGAATTTTGTCGA-T.................................................................................................24200.102000020
......................................T-GGCCGAACACGACCGTGAAAAGACC..........................................................................................................................................26140.071000001
.................................ATACTT-GGCCGAACACGACCGTGA.................................................................................................................................................24180.061000010
...................................ACTT-GGCCGAACACGACCGTGA.................................................................................................................................................22180.061000010
..................................TACTT-GGCCGAACACGACCGTGAAA...............................................................................................................................................25180.061000010
.................................................................................................................CGGGTTGAAGAATGCGGGAAGCATC.................................................................25200.051000010
...............................................................................................................TTCGGGTTGAAGAATGCGGGAAGC....................................................................24200.051000010
..............................................................................................ATTTTGTCGA-TTACCGTTCGGGTTGAA.................................................................................27200.051000010
...........................................................................................TGAATTTTGTCGA-TTACCGTTCGGG......................................................................................25200.051000010
.....TAGATTTGAAGTCCGGCTACCACC..............................................................................................................................................................................24200.051000010
................................................................................................................TCGGGTTGAAGAATGCGGGAAGCATCT................................................................27200.051000010
................TCCGGCTACCACCAGATATACTT-GGCC...............................................................................................................................................................27200.051000010
..............................................................................................ATTTTGTCGA-TTACCGTTCG........................................................................................20200.051001000
...............................................................................................................................CGGGAAGCATCTTCCAAAGAGCGATC..................................................26200.051000010
..............................................................................................ATTTTGTCGA-TTACCGTTCGGGTT....................................................................................24200.051000010
....TTAGATTTGAAGTCCGGCTACCAC...............................................................................................................................................................................24200.051000010
.CG-TTAGATTTGAAGTCCGGCTACCA................................................................................................................................................................................25200.051000010
................................................................................................................TCGGGTTGAAGAATGCGGGAAGCATC.................................................................26200.051001000
.....TAGATTTGAAGTCCGGCTACCACCA.............................................................................................................................................................................25200.051000100
..............................................................................................ATTTTGTCGA-TTACCGTTCGG.......................................................................................21200.051000010
droYak3
AAACTTAGATTTGAAGTCCGGCTACCACC---TATACTT-GGCCGAACATGACCGTGAAAAGACCTCCTTTTCGGTGAACGGCGGAAAGTACGAATTTTGTCGA-TTACCGTTTGGGTTGAAAAATGCGGGAAGCATCTTCCAAACAGCGAT---------------------------------------------------SizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
................................................................................................................TTGGGTTGAAAAATGCGGGAAGCATC.................................................................2621.5030000003
......................TACCACC---TATACTT-GGCCGAACATG........................................................................................................................................................2511.0010000010
.................................................................................................................TGGGTTGAAAAATGCGGGAAGCATC.................................................................2521.0020000002
.......................ACCACC---TATACTT-GGCCGAACATGACC.....................................................................................................................................................2711.0010000001
................TCCGGCTACCACC---TATACTT-GGCC...............................................................................................................................................................2411.0010000001
................TCCGGCTACCACC---TATACTT-GGCCGAACA..........................................................................................................................................................2911.0010000010
....TTAGATTTGAAGTCCGGCTACCACC---TA.........................................................................................................................................................................2711.0010000010
.....................................TT-GGCCGAACATGACCGTGAAAAGACC..........................................................................................................................................2740.7530000003
...............................................................................................................TTTGGGTTGAAAAATGCGGGAAGCATC.................................................................2720.5010000001
..................................................................................................................GGGTTGAAAAATGCGGGAAGCATC.................................................................2420.5010010000
......................................T-GGCCGAACATGACCGTGAAAAGACC..........................................................................................................................................2640.5020000011
....................................................................................GAAAGTACGAATTTTGTCGA-TTACC.............................................................................................2550.4020000020
....................................................................................GAAAGTACGAATTTTGTCGA-TTAC..............................................................................................2450.4020000011
................................TATACTT-GGCCGAACATGACCGTGAA................................................................................................................................................2640.2510000001
..............................................................................................ATTTTGTCGA-TTACCGTTTGGGTT....................................................................................2450.2010010000
.........................................GCCGAACATGACCGTGAAAAGACC..........................................................................................................................................2450.2010000001
....................................................................................GAAAGTACGAATTTTGTCGA-TT................................................................................................2250.2010000001
.............................................................GACCTCCTTTTCGGTGAACGGC........................................................................................................................2260.1710000010
..........................................................AAAGACCTCCTTTTCGGTGAACGG.........................................................................................................................2460.1710000010
....TTAGATTTGAAGTCCGGCTACCA................................................................................................................................................................................2380.1310000010
droEug1
ACC-CTAGACTTAAAATCGGGGTACCACCAGATTTATCT-GGCTGAAAAAGACCGTGAAAA-ACGGCTTTCTCCATAAAGGGAGGAAAGTATGAATTATGCCGT-CTACCCTTTGGACTGAAAAATGCGCGAAGCATCTTTCAAAGGGCAATTGA------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
ACA-CTAGACCTGAAGTCAGGCTACCACCAGATAACTCT-GGCGGAACGTGATCGCGAAAAGACCTCGTTTTCTGTAAATGGAGGCAAGTACGAGTTTTGTAGG-CTCCCGTTCTGTCTAATGAACGCGGAAAGCATCTTCCAAAGAAGACACGTTGACGT------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ACC-CTAGACTTGAAGTCAGGGTATCATCAGATATACTT-GGCCGAGAAAGACCGGGAAAAAACCTCGTTCTCAGTTAACGGAGGAAAATACGAATTTTGTCGA-CTACCTTTCGGATTAAAAAACGCAGGTAGCATATTCCAAAGAGCCATCGA------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ACC-CTAGACTTAAAATCGGGGTACCACCAGATTTATCT-GGCAGAAAAAGACCGTGAAAAAACTGTTTTCTCCATAAACGGAGGAAAGTATGAATTTTGCCGT-CTACCCTTTGGACTGAAAAAGGCGGGAAGCATCTTTCAAAAGGCGATCGACGACGTTCT--------------------------------ACGTGAASizeHit CountTotal NormTotal
No Reads
droRho1
ACA-ATCGATTTGAAGTCTGGCTACCACCAGATCACTCT-GGCAGAGCGTGACCGTGAAAA-ACTTCCTTTTCCGTTAACGGAGGAAAGTACGAGTTTCGCCGGTCTACCGTTTGGTTTGAAGAATGCTGCCAGCATCTTCCAAAGAACCAT---------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
ACT-CTAAACTGAAAATCCGGCTATCACCAAATTTTCCT-CGCGGAGAAAGATCTCGAAAAAACCTAATTTTCAGTTAACGGAGGCAAGTATGAATTCTGCCTT-TTGCTTTTTGGATTAAAAAATGCTGGTATCATTTTTCAAAGGGCAATCGATTACGTA-----------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
ACC-CTAGACTTGAAGTCGGTGTACCACCAAATATACCT-GGCTGAAAAGGACCGAAAGAAGACCTCGTTCTCAGTTAATGGTGGGAAATACGAGTTCTGCCGA-CTACCATTCGGTCTGAAAAATGCAGGGAGTATCTTCCAAAGAGCCAT---------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
ATG-ATTGATTTGAAGTCTGGCTATTAACTAATTATACT-GGCAGAGCGTGACGGTGAAAAAACTTCCTTTTCCGTTAACGGAGGAAAATATGAGTTTCGCCGA-CTGCCATTCGGATTGAGGAATGCTGCCAGCATCTTCCAAAGAACCATCGACGACATACT------------------------------------GGASizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
.......................................................................................................................................ATCTTCCAAAGAACCATCGACGACA...........................................25200.102000020
........................................................................................................................................TCTTCCAAAGAACCATCGACGACA...........................................24200.051000010
.........................................................................................................................................CTTCCAAAGAACCATCGACGACATACT------------------------------------...27200.051000001
..................................................................................................................................CCAGCATCTTCCAAAGAACCATCG.................................................24200.051000010
.........................................................................................................................................CTTCCAAAGAACCATCGACGACATA.........................................25200.051000010
droBip1
ACG-CTCGATTTAAAGTCCGGCTACCACCAAATTATTCT-GGCAGAACGTGACCGTGAGAAAACTTCCTTTTCCGTAAACGGGGGAAAATACGAGTTCCGTCGA-CTGCCATTCGGGTTAAGAAATGCTGCCAGCATCTTCCAAAGAACCAT---------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
ACC-CTCGACTTAAAGTCTGGGTACCACCAAATCTACCT-TGCGGAGCATGACCGCGAAAAGACTTCGTTTTCAGTAAGCAGCGGCAAGTACTAGTTCTGTCGG-CTTCCGTTTGGCCTGCGCAATGCAAGCAGCATATTCCAAAGGGCAATAGA------------------------------------------------SizeHit CountTotal NormTotalV112
Male-body		V043
Embryo		V051
Head		M022
Male-body		M040
Female-body		M059
Embryo		M062
Head
...................................................................GTTTTCAGTAAGCAGCGGCAAGT.................................................................................................................2391.0090000900
......................TACCACCAAATCTACCT-TGCGGA.............................................................................................................................................................2390.8980000800
......................TACCACCAAATCTACCT-TGCGGAG............................................................................................................................................................2490.8980000800
......................TACCACCAAATCTACCT-TGCGGAGCA..........................................................................................................................................................2690.5650000500
...........................................................................................................TCCGTTTGGCCTGCGCAATGCAAGCAGC....................................................................2890.4441000300
....................................................................TTTTCAGTAAGCAGCGGCAAGTA................................................................................................................2390.3331000200
......................TACCACCAAATCTACCT-TGCGGAGC...........................................................................................................................................................2590.3330000300
................................................................................................................................AAGCAGCATATTCCAAAGGGC......................................................2180.2520000200
......................TACCACCAAATCTACCT-TGCGG..............................................................................................................................................................2290.2220000200
...................................................................GTTTTCAGTAAGCAGCGGCAA...................................................................................................................2190.2220100100
...................................................................GTTTTCAGTAAGCAGCGGCAAG..................................................................................................................2290.2220000200
...............................................................................................TTCTGTCGG-CTTCCGTTTGG.......................................................................................2080.1310000100
................................................................................................................................AAGCAGCATATTCCAAAGGGCAATAG.................................................2680.1310000010
...............................................................................................TTCTGTCGG-CTTCCGTTTGGCCTGCG.................................................................................2680.1310000100
...............................................................................................TTCTGTCGG-CTTCCGTTTGGCCT....................................................................................2380.1311000000
................................................................................................TCTGTCGG-CTTCCGTTTGGCCT....................................................................................2280.1310000100
.....................................................................................................................................GCATATTCCAAAGGGCAATAGA------------------------------------------------2280.1310000100
.........................................................................................................................GCAATGCAAGCAGCATATTCCAAAGG........................................................2680.1310000100
................................................................................................TCTGTCGG-CTTCCGTTTGG.......................................................................................1980.1310000100
................................................................................................................................AAGCAGCATATTCCAAAGGGCAATA..................................................2580.1311000000
.............................................................................................................................TGCAAGCAGCATATTCCAAAGGGCA.....................................................2580.1310000100
.............................................................................................................................TGCAAGCAGCATATTCCAAAGGGCAA....................................................2680.1310000100
................................................................................................................................AAGCAGCATATTCCAAAGGGCAA....................................................2380.1310000100
...................................................................GTTTTCAGTAAGCAGCGGCAAGTAC...............................................................................................................2580.1310000100
...........................................................................................................TCCGTTTGGCCTGCGCAATGCAAG........................................................................2490.1110000100
..................................TACCT-TGCGGAGCATGACCGCGAAA...............................................................................................................................................2590.1110000100
...................................................................GTTTTCAGTAAGCAGCGGC.....................................................................................................................1990.1110000100
...................................................................GTTTTCAGTAAGCAGCGGCA....................................................................................................................2090.1110000100
..........................................CGGAGCATGACCGCGAAAAGACT..........................................................................................................................................2390.1110000100
.....................................................................TTTCAGTAAGCAGCGGCAAGTA................................................................................................................2290.1110000100
...................................................................GTTTTCAGTAAGCAGCGGCAAGTA................................................................................................................2490.1110000100
................................................................TTCGTTTTCAGTAAGCAGCGGCA....................................................................................................................2390.1110000100
...........................................................................................................TCCGTTTGGCCTGCGCAATGC...........................................................................2190.1110000100
...................................................................GTTTTCAGTAAGCAGCGG......................................................................................................................1890.1110000100
................................................ATGACCGCGAAAAGACTTCGT......................................................................................................................................2190.1110000100
....................................CCT-TGCGGAGCATGACCGCGAAA...............................................................................................................................................2390.1110000100
................................................................TTCGTTTTCAGTAAGCAGC........................................................................................................................1990.1110000100
....................................................................TTTTCAGTAAGCAGCGGCAAGT.................................................................................................................2290.1110000100
........ACTTAAAGTCTGGGTACCACC..............................................................................................................................................................................2190.1110000100
droPer2
ACA-TTAGATCTAAAGTCCGGCTATCACCAAATTTATCT-AGCAGAACAGGATCGCGAGAAGACGGCCTTTTCCGTAAACGGCGGAAAGTACGAATTCTGCAGA-CTACCGTTCGGGTTGAAGAATGCGGGAAGCATCTTCCAAAGAGCGATAGACGACGTACTGCATGAACAGATTGGCAAAACTTGCTATGTCTACGTAGASizeHit CountTotal NormTotalV111
Male-body		V042
Embryo		V050
Head		V057
Head		M021
Embryo		M042
Female-body
......................................................................................................................TGAAGAATGCGGGAAGCATC.................................................................2011.001100000
.........................................................................CGTAAACGGCGGAAAGTAC...............................................................................................................1911.001010000
droWil2
ACA-TTAGATCTTAAATCCGGGTACCACCAGATCTACCT-GGCGGAGGGCGATCGGGAAAAGACGTCCTTCTCAGTAAATGGCGGAAAGTACGAGTTCTGTCGA-CTACCTTTTGGTTTAAAAAATGCCGGTAGCATTATTCAAAGAGCAAT---------------------------------------------------SizeHit CountTotal NormTotalV117
Male-body		V118
Embryo		V119
Head		M020
Head		M045
Female-body
....................................................................................GAAAGTACGAGTTCTGTCGA-CTACCTT...........................................................................................2770.14101000
...........................................................AAGACGTCCTTCTCAGTAAATGG.........................................................................................................................23100.10100001
....................................................................TTCTCAGTAAATGGCGGAAAGTACGAG............................................................................................................27130.08100001
droVir3
ACA-TTGGACCTAAAATCCGGCTATCACCAGATCACGCT-AGCAGAGCGTGACCGTGAAAAAACAGCCTTTGCAGTTAACGGGGGGAAGTACGAATTTTGTCGA-CTTCCCTTTGGGTTGAAGAATGCGGCCAGCATCTTCCAAAGAACTGTTG----------------------------------CTATGTCTACGTTGASizeHit CountTotal NormTotalV116
Male-body		V053
Head		V047
Embryo		M027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis
......................................................................................................................................CATCTTCCAAAGAACTGTTG----------------------------------CTATGTC........2713.0030000000000000000000000000000002000000001000
.................................................................................................................................................GAACTGTTG----------------------------------CTATGTCTACGTTGA2412.0020000000000000000100000000000000000000001000
................................................................................................................................................AGAACTGTTG----------------------------------CTATGTCTACGTTGA2512.0020000000000000000000000000000020000000000000
......................................................................................................................................CATCTTCCAAAGAACTGTTG----------------------------------CTA............2311.0010000000000000000000000000000000000000001000
.................................................................................................................................................GAACTGTTG----------------------------------CTATGTCTACGT...2111.0010000000000000000000000000000000000000001000
......................................................................................................................................CATCTTCCAAAGAACTGTTG----------------------------------CTAT...........2411.0010000000000000000000000000000000000000001000
.....................................................................................GAAGTACGAATTTTGTCGA-CT................................................................................................21200.4590000000001010000000000000010032000000000010
....................................................CCGTGAAAAAACAGCCTTTGCAGT...............................................................................................................................24200.3570000000200010000100000000000000100000001010
..................................................GACCGTGAAAAAACAGCCTTTGCAGT...............................................................................................................................26200.2040000000000000000000000000001011000010000000
....................................................................TTTGCAGTTAACGGGGGGAAG..................................................................................................................21200.2040000020000000000100000000000001000000000000
......................TATCACCAGATCACGCT-AGCAGA.............................................................................................................................................................23200.2040000000000000000000000000010030000000000000
....................................................................TTTGCAGTTAACGGGGGGAAGT.................................................................................................................22200.2040000010000000000000000000000110000001000000
....................................................................TTTGCAGTTAACGGGGGGAA...................................................................................................................20200.1530000000100000100000000000000010000000000000
...........................................................................................................TCCCTTTGGGTTGAAGAATGC...........................................................................21200.1530000000000010000000000010000000010000000000
......................TATCACCAGATCACGCT-AGCAGAG............................................................................................................................................................24200.1530000000100000000000000000010100000000000000
..............................................................................................ATTTTGTCGA-CTTCCCTTTGGGTTGA..................................................................................26200.1530000000000000000000000000000000000010001010
......................TATCACCAGATCACGCT-AGCAGAGC...........................................................................................................................................................25200.1530000020100000000000000000000000000000000000
....................................................................TTTGCAGTTAACGGGGGGAAGTAC...............................................................................................................24200.1020000000000000000000000000000001000000001000
...........................................................................................................TCCCTTTGGGTTGAAGAATGCGGC........................................................................24200.1020000000000000100000000000000000000000010000
..................................................GACCGTGAAAAAACAGCCTTTGCAG................................................................................................................................25200.1020000000000000000000000000000000000000100100
.................................................................................................................TGGGTTGAAGAATGCGGCCAGCATC.................................................................25200.1020000000000000000100000000000010000000000000
..................................................GACCGTGAAAAAACAGCCTTTGC..................................................................................................................................23200.1020000000000000000000000000000001000000000010
.....................................................CGTGAAAAAACAGCCTTTGCAGT...............................................................................................................................23200.1020000000000000000000000000000000000000000020
..............................................................................................ATTTTGTCGA-CTTCCCTTTGGGTTGAAG................................................................................28200.1020002000000000000000000000000000000000000000
.....................................................................................GAAGTACGAATTTTGTCGA-C.................................................................................................20200.1020000000000000000000000000010010000000000000
....................................................................TTTGCAGTTAACGGGGGGAAGTACG..............................................................................................................25200.1020000010000000000000000000000100000000000000
....................................................................TTTGCAGTTAACGGGGGGAAGTA................................................................................................................23200.1020000000000000000000000000001000000000010000
......................TATCACCAGATCACGCT-AGCAG..............................................................................................................................................................22200.1020000000000000000000000000001010000000000000
............AAAATCCGGCTATCACCAGATCACG......................................................................................................................................................................25180.0610000000000000000000000000000010000000000000
..........................................................................................................TTCCCTTTGGGTTGAAGAATGCGGCC.......................................................................26190.0510001000000000000000000000000000000000000000
.................................................................................................................TGGGTTGAAGAATGCGGCCAGCATCTT...............................................................27190.0510000000000000000000000000000001000000000000
...............................................................................................TTTTGTCGA-CTTCCCTTTGGGTTGAAG................................................................................27200.0510000010000000000000000000000000000000000000
.......................................................................................................A-CTTCCCTTTGGGTTGAAGAATGCG..........................................................................25200.0510000000000000000000000000000010000000000000
....................................................................TTTGCAGTTAACGGGGGGAAGTACGAA............................................................................................................27200.0510000000000000000000000000000000000000001000
.....................................................................................GAAGTACGAATTTTGTCGA-..................................................................................................19200.0510000000000000000000000000000000000100000000
..........................................................................................................TTCCCTTTGGGTTGAAGAATGCGGC........................................................................25200.0510000000000010000000000000000000000000000000
...................................................ACCGTGAAAAAACAGCCTTTG...................................................................................................................................21200.0510000010000000000000000000000000000000000000
..A-TTGGACCTAAAATCCGGC.....................................................................................................................................................................................19200.0510000000000000000000000000000000000100000000
..............................................................................................ATTTTGTCGA-CTTCCCTTTGGGT.....................................................................................23200.0510001000000000000000000000000000000000000000
.................................................................................................................................GCCAGCATCTTCCAAAGAACTGTTG----------------------------------...............25200.0510000000000000000000000000010000000000000000
................................................GTGACCGTGAAAAAACAGCCTTTGC..................................................................................................................................25200.0510000000000000000100000000000000000000000000
..........................................................................................................TTCCCTTTGGGTTGAAGAATGCG..........................................................................23200.0510000000000010000000000000000000000000000000
......................TATCACCAGATCACGCT-AGCAGAGCG..........................................................................................................................................................26200.0510000010000000000000000000000000000000000000
....................................................CCGTGAAAAAACAGCCTTTGC..................................................................................................................................21200.0510000000000000000000000000000000000000000010
...................................................ACCGTGAAAAAACAGCCTTTGCAGT...............................................................................................................................25200.0510000000000000000000000000000010000000000000
................................TCACGCT-AGCAGAGCGTGACCGTGA.................................................................................................................................................25200.0510000000000000000000000000000000000000000100
.....................................................................................................CGA-CTTCCCTTTGGGTTGAAG................................................................................21200.0510000010000000000000000000000000000000000000
.........................................................................................................CTTCCCTTTGGGTTGAAGAATGC...........................................................................23200.0510000000000000000000000000000001000000000000
..........................................................................................................TTCCCTTTGGGTTGAAGAATG............................................................................21200.0510000000000000000000000000000100000000000000
......................................................................................................GA-CTTCCCTTTGGGTTGAAGAA..............................................................................22200.0510000000000000000000000000000000000000001000
.....................................................CGTGAAAAAACAGCCTTTGCAGTTAACG..........................................................................................................................28200.0510000010000000000000000000000000000000000000
................................................................................................................TTGGGTTGAAGAATGCGGCCAGC....................................................................23200.0510000000000000000000000000010000000000000000
..................................................GACCGTGAAAAAACAGCCTTTGCA.................................................................................................................................24200.0510000000000000000000000000001000000000000000
....................................................CCGTGAAAAAACAGCCTTTGCAG................................................................................................................................23200.0510000000000000000000000000000000000000010000
...................................................................................................................GGTTGAAGAATGCGGCCAGCAT..................................................................22200.0510000000000000000000000000000010000000000000
................................................................AGCCTTTGCAGTTAACGGGG.......................................................................................................................20200.0510000000000000000000000000000001000000000000
......................TATCACCAGATCACGCT-AGC................................................................................................................................................................20200.0510000000001000000000000000000000000000000000
......................................................................................................................TGAAGAATGCGGCCAGCATCTT...............................................................22200.0510000000000000000000000000000010000000000000
............................................................................................................CCCTTTGGGTTGAAGAATGCGGCCAGCA...................................................................28200.0510000010000000000000000000000000000000000000
..........................ACCAGATCACGCT-AGCAGAGCGT.........................................................................................................................................................23200.0510000000000000000000000000000010000000000000
....................................................................TTTGCAGTTAACGGGGGGAAGTACGA.............................................................................................................26200.0510000000000000000000000000000000000000010000
........................TCACCAGATCACGCT-AGCAGAGCGTGAC......................................................................................................................................................28200.0510000000000000000000000000000010000000000000
..............................................................................................ATTTTGTCGA-CTTCCCTTTG........................................................................................20200.0510000000000000000000000000000000000000000010
...............................................................................................TTTTGTCGA-CTTCCCTTTGGGTTGA..................................................................................25200.0510000010000000000000000000000000000000000000
......................................................GTGAAAAAACAGCCTTTGCAGTTA.............................................................................................................................24200.0510000000000000000000000000010000000000000000
.....................................................CGTGAAAAAACAGCCTTTGCAGTTAAC...........................................................................................................................27200.0510000010000000000000000000000000000000000000
...................................................................................................................GGTTGAAGAATGCGGCCAGCATC.................................................................23200.0510000010000000000000000000000000000000000000
..............................................................................................ATTTTGTCGA-CTTCCCTTTGG.......................................................................................21200.0510000010000000000000000000000000000000000000
.....................................................................................GAAGTACGAATTTTGTCGA-CTTC..............................................................................................23200.0510000000000000000000000000000010000000000000
..........................ACCAGATCACGCT-AGCAGAG............................................................................................................................................................20200.0510000000100000000000000000000000000000000000
..............................................................................................ATTTTGTCGA-CTTCCCTTTGGGTTG...................................................................................25200.0510001000000000000000000000000000000000000000
................................................................AGCCTTTGCAGTTAACGGGGGGAAG..................................................................................................................25200.0510000010000000000000000000000000000000000000
................................................................................................................TTGGGTTGAAGAATGCGGCCAGCATC.................................................................26200.0510000000010000000000000000000000000000000000
..........................................................................................................TTCCCTTTGGGTTGAAGAATGCGG.........................................................................24200.0510000000000010000000000000000000000000000000
.....................................................CGTGAAAAAACAGCCTTTGCAGTTA.............................................................................................................................25200.0510000000000000000000000000001000000000000000
..............................................................................................ATTTTGTCGA-CTTCCCTTTGGGTT....................................................................................24200.0510000000000000000000000000000001000000000000
.................................................TGACCGTGAAAAAACAGCCTTTGCAGT...............................................................................................................................27200.0510000000000000000100000000000000000000000000
......................................................................................................GA-CTTCCCTTTGGGTTGAAGAATGC...........................................................................25200.0510000000000000000000000000000010000000000000
....................................................CCGTGAAAAAACAGCCTTTGCAGTT..............................................................................................................................25200.0510000000000000000000000000000000000000000010
................................................................AGCCTTTGCAGTTAACGGGGGG.....................................................................................................................22200.0510000010000000000000000000000000000000000000
......................................................................................................GA-CTTCCCTTTGGGTTGAAGAATG............................................................................24200.0510000000000000000000000000000000000000100000
droMoj3
ACT-CTGGACCTTAAATCCGGCTATCACCAGATTTTTCT-CGCTGAACAAGACCGTGAAAAAACATCTTTCTCTGTAAATGGAGGAAAGTATGAATTTTGTCGA-TTGCCGTTCGGGTTGAAGAATGCTGGAAGCATCTTCCAAAGAGCGATTGATGACGTACTGCGTGAACAAATTGGCAAAACATGCTATGTGTACGTAGASizeHit CountTotal NormTotalV110
Male-body		V056
Head		V049
Head		V041
Embryo		M046
Female-body		M060
Embryo
................................................................................................................TCGGGTTGAAGAATGCTGGAAGCATC.................................................................2621.002100010
............................................................................................................................................................GACGTACTGCGTGAACAAATTGGC.......................2420.501000010
.................................................................................GAGGAAAGTATGAATTTTGTCGA-TTG...............................................................................................2620.501000010
.................................................................................................................................................GAGCGATTGATGACGTACTGCGTGA.................................2520.501100000
....................................................................................GAAAGTATGAATTTTGTCGA-TTGCC.............................................................................................2520.501000010
.................................................................................................................CGGGTTGAAGAATGCTGGAAGCATC.................................................................2520.501000010
droGri2
GTG-CTAGATTTGAAGAGCGGATTCCATCAAATCCCCCT-CAAAGCAAAAGACATAGAAAAGACTGCATTCGCAGTTAACGGCGGAAAATACGAATTCACCAGA-CTTCCGTTTGGACTAAAAAATTCTCCATCAATATTCCAACGACATTT-----------------------------------GTTACGTCTACATCGASizeHit CountTotal NormTotalV109
Male-body		M041
Female-body
No Reads

Generated: 12/06/2013 at 02:35 PM