ID:

dsi_243

 Coordinate:

3R:3003793-3003856 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.4 -31.9 -31.8

Flybase annnotation

Antisense to CDS [Dsim\GD19915-cds]; Antisense to exon [dsim_GLEANR_3704:1]

No Repeatable elements found

Sense Strand Reads

######################################################################################################################################------------------------------
 TCATCGCTCTCCGAGCTGTGCTCGTCCCCGAAAAAGTAGTCGGAGCTGGAGGTGGAGGCGTTGGTGGCCTGCGATCCCTCGAAGAAGTGGCGCGCCATCGTGGCCTCCAAGTCGAAATTGTCCATGGAAAACATGGTAAATCTGTTGCGCTTCTGTTTGTCTGC
***********************************......(((....((..(((((((..(((((((.(((.((..((...))..)).))).)))))))..)))))))..)).......)))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 O002
Head
 SRR553487
Ovary		 M024
male body
 SRR553486
Ovary		 SRR553488
Ovary
..................................................GGTGGAGGCGTTGGTGGGAT.............................................................................................. 20 2 2 43.50 87 0 0 0 3 0 0
...................................................GTGGAGGCGTTGGTGGGAT.............................................................................................. 19 2 6 20.83 125 0 0 0 0 1 0
..................................................GGTGGAGGCGTTGGTGGGATAC............................................................................................ 22 3 2 16.50 33 0 0 0 3 0 0
..................................................GGTGGAGGCGTTGGTGGGATA............................................................................................. 21 3 5 10.60 53 0 0 0 2 0 0
...................................................GTGGAGGCGTTGGTGGGATAC............................................................................................ 21 3 4 9.50 38 0 0 0 0 0 0
...................................................GTGGAGGCGTTGGTGGGATA............................................................................................. 20 3 11 9.00 99 0 0 0 3 0 0
..................................................GGTGGAGGCGTTGGTGGC................................................................................................ 18 0 2 8.50 17 12 4 0 1 0 0
..................................................GGTGGAGGCGTTGGTGGG................................................................................................ 18 1 3 4.00 12 0 0 0 2 0 0
.................................................AGGTGGAGGCGTTGGTGG................................................................................................. 18 0 1 3.00 3 2 1 0 0 0 0
..................................................GGTGGAGGCGTTGGTGGGA............................................................................................... 19 2 11 1.73 19 0 0 0 1 0 0
....................................................TGGAGGCGTTGGTGGGAT.............................................................................................. 18 2 10 1.10 11 0 0 0 0 0 0
..............................................................................................................GTCGAAATGGTCTATGGA.................................... 18 2 1 1.00 1 0 0 0 1 0 0
..................................................GGTGGAGGCGTTGGTGGGATACG........................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
.........................................................................................................................................AAATCTGTTGCGCTT............ 15 0 1 1.00 1 0 0 1 0 0 0
..................................................GGTGGAGGCGTTGGTGGCCT.............................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0
.....................................................GGAGGCGTTGGTGGGATAC............................................................................................ 19 3 20 0.85 17 0 0 0 1 0 0
.................................................CGGTGGAGGCGTTGGTGG................................................................................................. 18 1 6 0.83 5 0 0 0 0 0 0
....................................................TGGAGGCGTTGGTGGGATAC............................................................................................ 20 3 11 0.73 8 0 0 0 1 0 0
....................................................TGGAGGCGTTGGTGG................................................................................................. 15 0 3 0.67 2 0 0 0 0 1 1
.........................................................................................................................................AAATCTGTTGGGCTT............ 15 1 20 0.65 13 0 0 13 0 0 0
.................................................CGGTGGAGGCGTTGGTGGG................................................................................................ 19 2 10 0.60 6 0 0 0 3 0 0
....................................................TGGAGGCGTTGGTGGGATA............................................................................................. 19 3 20 0.60 12 0 0 0 0 0 0
.........................................................................................................................................AAATCTGTTGGGCTTC........... 16 1 2 0.50 1 0 0 1 0 0 0
...................................................GTGGAGGCGTTGGTGGGCTA............................................................................................. 20 2 3 0.33 1 0 0 0 0 0 0
................................................TCGGTGGAGGCGTTGGTGGG................................................................................................ 20 3 20 0.25 5 0 0 0 1 0 0
................................................TCGGTGGAGGCGTTGGTG.................................................................................................. 18 2 17 0.24 4 0 0 0 4 0 0
.................................................CGGTGGAGGCGTTGGT................................................................................................... 16 1 11 0.18 2 0 0 0 0 0 0
..............................................TGGTGGTGGAGTCGTTGGTG.................................................................................................. 20 2 12 0.17 2 0 0 0 0 0 0
................................................TCGGTGGAGGCGTTGGTGG................................................................................................. 19 2 13 0.15 2 0 0 0 0 0 0
................TGTGCTCGTCCCAGA..................................................................................................................................... 15 1 7 0.14 1 0 0 1 0 0 0
...................................GTAGTCAGAGCTGGA.................................................................................................................. 15 1 8 0.13 1 0 0 0 0 0 0
..................................................GGTGGAGTCGTTGGTG.................................................................................................. 16 1 8 0.13 1 0 0 0 0 1 0
..............................................TTTCGGTGGAGGCGTTGGTGG................................................................................................. 21 3 9 0.11 1 0 0 0 0 0 0
..............................................TTTCGGTGGAGGCGTTGGTG.................................................................................................. 20 3 19 0.11 2 0 0 0 2 0 0
...................................................GTGGAGGCGTTGTTGGGCTA............................................................................................. 20 3 11 0.09 1 0 0 0 0 0 0
...............................ACAAGTAGTCGGAGC...................................................................................................................... 15 1 12 0.08 1 0 0 0 0 0 1
..................................................CGTGGAGGCGTTGGTGGGAT.............................................................................................. 20 3 13 0.08 1 0 0 0 0 0 0
.......................................................................................................................................GTGAATCGGTTGCGCGTCT.......... 19 3 13 0.08 1 0 0 0 0 0 0
........................................................GGCGTTGGTTGCTTGCG........................................................................................... 17 2 15 0.07 1 0 0 0 0 0 0
.................................................CGGTGGAGTCGTTGGTGG................................................................................................. 18 2 19 0.05 1 0 0 0 1 0 0
..............................................TTTCGGTGGAGGCGTTGGT................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0
..................................................GTTGGAGGCGTTGGTGGGAT.............................................................................................. 20 3 20 0.05 1 0 0 0 0 0 0

Anti-sense strand reads

######################################################################################################################################------------------------------
 GCAGACAAACAGAAGCGCAACAGATTTACCATGTTTTCCATGGACAATTTCGACTTGGAGGCCACGATGGCGCGCCACTTCTTCGAGGGATCGCAGGCCACCAACGCCTCCACCTCCAGCTCCGACTACTTTTTCGGGGACGAGCACAGCTCGGAGAGCGATGA
***********************************......(((.......((..(((((((..(((((((.(((.((..((...))..)).))).)))))))..)))))))..))....)))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
Ovary
..........................................................................CCACTTCTTAGAGGGACC........................................................................ 18 2 2 3.50 7 0
.......................................................................GCGCAACTTCTTAGAGGGA.......................................................................... 19 2 2 1.00 2 0
...................................................GACTTGGAGGCCACGATGGCGCGC......................................................................................... 24 0 1 1.00 1 1
............................................................................................................................................CGAGCCCAGCTCGGGGAGCCA... 21 3 1 1.00 1 0
...........................................................................CACTTCTTAGAGGGA.......................................................................... 15 1 3 0.67 2 0
.....................................................................................AGGGGTCGCCGGCCACCAACT.......................................................... 21 3 3 0.33 1 0
..............................................ATGTCGACTTGGAGGC...................................................................................................... 16 1 4 0.25 1 0
...........................................ACGATGTCGACTTGGAGG....................................................................................................... 18 2 6 0.17 1 0
......................................................................GGCGCAACTTCTTAGAGGGA.......................................................................... 20 3 6 0.17 1 0
........................................................................CGCAACTTCTTAGAGGG........................................................................... 17 2 13 0.15 2 0
..................................................CTACTTGGAGGCCAGGAT................................................................................................ 18 2 8 0.13 1 0
............................................................................................................................................CGAGCCCAGGTCGGGGAGC..... 19 3 9 0.11 1 0
.......................................................................GCGCCACTGCTTAGAGG............................................................................ 17 2 11 0.09 1 1
.......................................................................GCGCAATTTCTTAGAGGGA.......................................................................... 19 3 13 0.08 1 0
.........................................................................TCCACTTCTTAGAGGGA.......................................................................... 17 2 14 0.07 1 0
.................................................................................CTCGACGGATCGCACGCCA................................................................ 19 3 15 0.07 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 3R:3003743-3003906 - dsi_243 T---CATCGCTCTCCGAGCTGTGCTCGTCCCCGAAAAAGTAGTCGGAGCTGGAGGTGGAGGCGTTGGTGGCCTGCGATCCCTCGAAGAAGTGGCGCGCCATCGTGGCCTCCAAGTCGAAATTGTCCATGGAAAACATGG--------------------------------------------------------------------------------------------------------------------------------------------T---------------------------AAATCTGTTGCGCTTCTGTTTGTCTGC
droSec2 scaffold_6:3056129-3056292 - T---CATCGCTCTCCGAGCTGTGCTCGTCCCCGAAAAAGTAGTCGGAGCTGGAGGTGGAGGCGTTGGTGGCCTGCGATCCCTCGAAGAAGTGGCGCGCCATCGTGGCCTCCAAGTCGAAATTGTCCATGGAAAACATGG--------------------------------------------------------------------------------------------------------------------------------------------T---------------------------AAATCTGTTGCGCTTCTGTTTGTCTGC
dm3 chr3R:2962858-2963021 - T---CATCGCTCTCCGAGCTGTGCTCGTCCCCAAAAAAATAGTCGGAGCTGGAGGTGGAGGCGTTGGTGGCCTGCGATCCCTCGAAGAAGTGGCGCGCCATCGTGGCCTCCAAGTCGAAATTGTCCATGGAAAACATGG--------------------------------------------------------------------------------------------------------------------------------------------T---------------------------AAATCTGTTGCGCTTCTGTTTGTGTGC
droEre2 scaffold_4770:3225524-3225713 - T---CATCGCTCTCCGAGCTGTGCTCGTCCCCGAAGAAGTAGTCGGAGCTGGAGGTGGAGGCGTTGGTGGCCTGTGATCCCTCGAAGAAATGGCGCGCCATCGTGGCCTCCAAGTCGAAGTTGTCCATGGAAAACATGG--------------------------------------------------------------------------------------------------------------------------------------------TTGGGGAAGCAGAGGGCCCGCAGTTGGTAAATCTGTTGCGCTTCTGT-TGTCTGC
droYak3 3R:7388071-7388261 + T---CATCACTCTCCGAGCTGTGCTCGTCCCCGAAAAAGTAATCGGAGCTGGAGGTAGAGGCGTTGGTGGCCTGTGATCCCTCAAAGAAATGGCGCGCCATCGTGGCTTCCAAGTCGAAATTATCCATGGAAAACATGG--------------------------------------------------------------------------------------------------------------------------------------------TCGATGAAGCGGAGAGCTCGAAGTTGGTAAATCTGTTGCGCTTCTGTTTGTCTGC
droEug1 scf7180000409796:125977-126167 - T---CATCGCTCTCCGAGCTGTGTTCGTCCCCAAAGAAATAATCGGAGCTGGAGGTGGAGGCATTGGTGGCCTGCGATCCTTCGAAGAAATGACGAGCCATCGTGGCCTCCAAGTCAAAGTTGTCCATTGAAAACATAG--------------------------------------------------------------------------------------------------------------------------------------------TCGGGCAATGAGGGAACGCTGAGCTGGTAAATCTGTTGCGCTTCTGTTTGTCTGG
droBia1 scf7180000302155:1673814-1674004 + T---CATCGCTCTCCGAGCTGTGCTCGTCCCCGAAAAAATAGTCGGAGCTAGAGGTGGAAGCGTTGGTGGCCTGCGATCCCTCGAAGAAATGGCGCGCCATCGTGGCCTCCAGGTCAAAGTTGTCCATGGAAAACATTG--------------------------------------------------------------------------------------------------------------------------------------------TCGGACAATCAGGGAACTCGGAACTCGAAAATCTGATGCGCTTCTGTTTGACTGC
droTak1 scf7180000415875:44348-44538 - T---CGTCGCTCTCCGAGCTGTGCTCATCACCGAAAAAGTAATCGGAGCTGGAGGTGGAGGCGTTGGTGGCCTGTGATCCCTCGAAGAAATGGCGCGCCATCGTGGCCTCCAAGTCAAAGTTGTCCATGGAAAACATTG--------------------------------------------------------------------------------------------------------------------------------------------TCAGGCAATCAGGGAAAACGGATCTCAAAAATCTGTTGCGCTTCTGTTTGTATCC
droEle1 scf7180000491104:1470781-1470970 + T---CATCGCTTTCGGAGCTGTGCTCGTCGCCAAAAAAATAATCGGAGCTGGAGGTGGAGGCGTTGGTGGCCTGCGATCCCTCGAAGAAATGGCGCGCCATTGTGGCCTCCAAGTCAAAGTTGTCCATGGAAAACATTG--------------------------------------------------------------------------------------------------------------------------------------------TCAGGCAATCAAG-ACCTTGGAGCTTGTTAAAATCTTGCGCTTCCGTTTGTCGCC
droRho1 scf7180000766583:13445-13620 + T---CATCGCTCTCCGAGCTGTGCTCGTCCCCGAAAAAATAATCGGAGCTGGAGGTGGAGGCGTTGGTGGCCTGCGATCCCTCGAAGAAGTGACGCGCCATCGTGGCCTCCAAGTCAAAATTGTCCATGGAAAACATTG--------------------------------------------------------------------------------------------------------------------------------------------TCCGGCAATCAAGG---------------AATATCTTTCGCTTGTGTTTGACGAC
droFic1 scf7180000452569:88088-88278 + T---CATCGCTTTCCGAGCTATGCTCGTCCCCGAAAAAGTAATCGGAGCTGGAGGTGGAGGCGTTGGTGGCCTGCGATCCCTCGAAGAAGTGGCGCGCCATCGTGGCCTCCAGGTCGAAGTTGTCCATGGAAAACATTG--------------------------------------------------------------------------------------------------------------------------------------------TCGGGCAATCAGGGAACTCGGAGCTGGTAAATCTGTTGCGCTTCTGTTTGCCTGC
droKik1 scf7180000302639:1959196-1959374 + T---CGTCGCTCTCCGAGCTGTGCTCGTCCCCGAAAAAGTACTCGGAACTGGAGGTGGAGGCGTTGGTGGCCTGCGATCCCTCAAAGAAGTGTCGCGCCATTGTGGCCTCCAAGTCAAAGTTGTCCATGGAAAACATTGT------------------------------------------------------------------------------------------------------------------------------------------GTCAGGCGATC--------------TCGAAAATCTGTTGCGCTTTTGTTTGCCGAT
droAna3 scaffold_13340:2739662-2739835 - T---CATCGCTCTCCGAGCTGTGTTCATCACCAAAGAAGTACTCGGAACTGGAGGTGGAGGCGTTGGTGGCCTGGGAGCCCTCGAAGAAGTGGCGCGCCATAGTGGCCTCCAAGTCAAAGTTGTCCATAGAAAACATTA--------------------------------------------------------------------------------------------------------------------------------------------TCACCCAATTTCGATATTTGCTATTTTTAAATCAGTTG-----------------
droBip1 scf7180000396712:1599757-1599930 + T---CATCGCTTTCCGAGCTGTGTTCATCCCCAAAGAAGTACTCGGAACTGGAGGTGGAGGCATTGGTGGCCTGGGAGCCCTCGAAGAAGTGGCGCGCCATAGTGGCCTCCAAGTCAAAGTTATCCATTGAAAACATTA--------------------------------------------------------------------------------------------------------------------------------------------TCACACAGTTCCGATTTTCGCGATTTGTAAATCTGTTG-----------------
dp5 2:26375223-26375389 - T---CATCGCTCTCCGAGCTGTGCTCGTCGCCAAAGAAGTACTCGGAACTCGAGGTGGAGGCATTGGTGGCCTGCGATCCTTCGAAGAAGTGACGCGCCATGGTGGCCTCCAAGTCAAAGTTGTCCATGGAAAACATCTTGCGC--------------------------------------------------------------------------C----------CG--------------------------AATGCTATG-----------------------------------------GAATCTGTTGCACA-------------
droPer2 scaffold_6:1704696-1704862 - T---CATCGCTCTCCGAGCTGTGCTCGTCGCCAAAGAAGTACTCGGAACTCGAGGTGGAGGCATTGGTGGCCTGCGATCCTTCGAAGAAGTGACGCGCCATGGTGGCCTCCAAGTCAAAGTTGTCCATGGAAAACATCTTGCGC--------------------------------------------------------------------------C----------CG--------------------------AATGCTATG-----------------------------------------GAATCTGTTGCACA-------------
droWil2 scf2_1100000004943:16560948-16561087 - TCTTCATCGCTCTCCGAGCTGTGTTCATCACCAAAGAAGTATTCCGAACTAGAGGTGGAACCATTTGTGGCCTGTGATCCCTCGAAAAAATGACGGGCCATAGTAGCCTCCAAGTCAAAATTATCCATGGAAAACATAA--------------------------------------------------------------------------------------------------------------------------------------------T------------------------------------------------------
droVir3 scaffold_13047:16812639-16812891 - T---CGTCGCTCTCCGAGCTGTGCTCGTCGCCAAAGTAGTACTCGGAGCTGGAGTTCGAGGCGTTGGTCGCCTGCGATCCCTCAAAGAAATGCCGAGCCATGGTGGCCTCCAAGTCGAAATTGTCCATGGAAAACATTTTATATTTCTCGCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTTTCTCTCTCTCTCTGGCTTTTCCTTTGTCCTATTA--------------------------AA-----------T--TTAATGTCAGCTAAT---------------------------------------TGTCCGA
droMoj3 scaffold_6540:13327045-13327228 + T---CGTCGCTCTCCGAGCTGTGCTCATCTCCGAAAAAGTATTCGGAACTGGAGTTCGAGGCATTCGTTGCCTGCGATCCCTCGAAGAAGTGGCGAGCCATCGTCGCTTCCAAGTCGAAATTGTCCATTGAGAACATTTTGCC-----------------------------------------------------------------------------------AATTGCAGTTATCCTTTCTTTTCAATGTTTCAA-----------A--CTAATGTTAG---------------------------------------------------
droGri2 scaffold_14906:3245497-3245671 - T---CGTCGCTCTCCGAGCTGTGCTCATCTCCGAAAAAGTACTCGGAACTGGAGTTGGAGGCATTGGTTGCCTGCGATCCTTCAAAGAAGTGCCGAGCCATTGTGGCCTCCAAGTCAAAGTTGTCCATGGAAAACATTTTACAT-------------------------------------------------------------------------------------TA--------------------------AATGCTCTTTTTATTT-----GTTGTACAA----------------------------------------TATCTGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
T---CATCGCTCTCCGAGCTGTGCTCGTCCCCGAAAAAGTAGTCGGAGCTGGAGGTGGAGGCGTTGGTGGCCTGCGATCCCTCGAAGAAGTGGCGCGCCATCGTGGCCTCCAAGTCGAAATTGTCCATGGAAAACATGG--------------------------------------------------------------------------------------------------------------------------------------------T---------------------------AAATCTGTTGCGCTTCTGTTTGTCTGCSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
.....................................................GGTGGAGGCGTTGGTGGC.......................................................................................................................................................................................................................................................................1828.50170010124000000
....................................................AGGTGGAGGCGTTGGTGG........................................................................................................................................................................................................................................................................1813.003000021000000
...................................................................................................................................................................................................................................................................................................................AAATCTGTTGCGCTT............1511.001000000000100
.....................................................GGTGGAGGCGTTGGTGGCCT.....................................................................................................................................................................................................................................................................2011.001000001000000
.......................................................TGGAGGCGTTGGTGG........................................................................................................................................................................................................................................................................1530.672000000001010
droSec2
T---CATCGCTCTCCGAGCTGTGCTCGTCCCCGAAAAAGTAGTCGGAGCTGGAGGTGGAGGCGTTGGTGGCCTGCGATCCCTCGAAGAAGTGGCGCGCCATCGTGGCCTCCAAGTCGAAATTGTCCATGGAAAACATGG--------------------------------------------------------------------------------------------------------------------------------------------T---------------------------AAATCTGTTGCGCTTCTGTTTGTCTGCSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
.....................................................GGTGGAGGCGTTGGTGGC.......................................................................................................................................................................................................................................................................1811.0010001
....................................................AGGTGGAGGCGTTGGTGG........................................................................................................................................................................................................................................................................1811.0010010
droEre2
T---CATCGCTCTCCGAGCTGTGCTCGTCCCCGAAGAAGTAGTCGGAGCTGGAGGTGGAGGCGTTGGTGGCCTGTGATCCCTCGAAGAAATGGCGCGCCATCGTGGCCTCCAAGTCGAAGTTGTCCATGGAAAACATGG--------------------------------------------------------------------------------------------------------------------------------------------TTGGGGAAGCAGAGGGCCCGCAGTTGGTAAATCTGTTGCGCTTCTGT-TGTCTGCSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
.....................................................GGTGGAGGCGTTGGTGGC.......................................................................................................................................................................................................................................................................1811.001001000
droYak3
T---CATCACTCTCCGAGCTGTGCTCGTCCCCGAAAAAGTAATCGGAGCTGGAGGTAGAGGCGTTGGTGGCCTGTGATCCCTCAAAGAAATGGCGCGCCATCGTGGCTTCCAAGTCGAAATTATCCATGGAAAACATGG--------------------------------------------------------------------------------------------------------------------------------------------TCGATGAAGCGGAGAGCTCGAAGTTGGTAAATCTGTTGCGCTTCTGTTTGTCTGCSizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
No Reads
droEug1
T---CATCGCTCTCCGAGCTGTGTTCGTCCCCAAAGAAATAATCGGAGCTGGAGGTGGAGGCATTGGTGGCCTGCGATCCTTCGAAGAAATGACGAGCCATCGTGGCCTCCAAGTCAAAGTTGTCCATTGAAAACATAG--------------------------------------------------------------------------------------------------------------------------------------------TCGGGCAATGAGGGAACGCTGAGCTGGTAAATCTGTTGCGCTTCTGTTTGTCTGGSizeHit CountTotal NormTotal
No Reads
droBia1
T---CATCGCTCTCCGAGCTGTGCTCGTCCCCGAAAAAATAGTCGGAGCTAGAGGTGGAAGCGTTGGTGGCCTGCGATCCCTCGAAGAAATGGCGCGCCATCGTGGCCTCCAGGTCAAAGTTGTCCATGGAAAACATTG--------------------------------------------------------------------------------------------------------------------------------------------TCGGACAATCAGGGAACTCGGAACTCGAAAATCTGATGCGCTTCTGTTTGACTGCSizeHit CountTotal NormTotal
No Reads
droTak1
T---CGTCGCTCTCCGAGCTGTGCTCATCACCGAAAAAGTAATCGGAGCTGGAGGTGGAGGCGTTGGTGGCCTGTGATCCCTCGAAGAAATGGCGCGCCATCGTGGCCTCCAAGTCAAAGTTGTCCATGGAAAACATTG--------------------------------------------------------------------------------------------------------------------------------------------TCAGGCAATCAGGGAAAACGGATCTCAAAAATCTGTTGCGCTTCTGTTTGTATCCSizeHit CountTotal NormTotal
No Reads
droEle1
T---CATCGCTTTCGGAGCTGTGCTCGTCGCCAAAAAAATAATCGGAGCTGGAGGTGGAGGCGTTGGTGGCCTGCGATCCCTCGAAGAAATGGCGCGCCATTGTGGCCTCCAAGTCAAAGTTGTCCATGGAAAACATTG--------------------------------------------------------------------------------------------------------------------------------------------TCAGGCAATCAAG-ACCTTGGAGCTTGTTAAAATCTTGCGCTTCCGTTTGTCGCCSizeHit CountTotal NormTotal
No Reads
droRho1
T---CATCGCTCTCCGAGCTGTGCTCGTCCCCGAAAAAATAATCGGAGCTGGAGGTGGAGGCGTTGGTGGCCTGCGATCCCTCGAAGAAGTGACGCGCCATCGTGGCCTCCAAGTCAAAATTGTCCATGGAAAACATTG--------------------------------------------------------------------------------------------------------------------------------------------TCCGGCAATCAAGG---------------AATATCTTTCGCTTGTGTTTGACGACSizeHit CountTotal NormTotal
No Reads
droFic1
T---CATCGCTTTCCGAGCTATGCTCGTCCCCGAAAAAGTAATCGGAGCTGGAGGTGGAGGCGTTGGTGGCCTGCGATCCCTCGAAGAAGTGGCGCGCCATCGTGGCCTCCAGGTCGAAGTTGTCCATGGAAAACATTG--------------------------------------------------------------------------------------------------------------------------------------------TCGGGCAATCAGGGAACTCGGAGCTGGTAAATCTGTTGCGCTTCTGTTTGCCTGCSizeHit CountTotal NormTotal
No Reads
droKik1
T---CGTCGCTCTCCGAGCTGTGCTCGTCCCCGAAAAAGTACTCGGAACTGGAGGTGGAGGCGTTGGTGGCCTGCGATCCCTCAAAGAAGTGTCGCGCCATTGTGGCCTCCAAGTCAAAGTTGTCCATGGAAAACATTGT------------------------------------------------------------------------------------------------------------------------------------------GTCAGGCGATC--------------TCGAAAATCTGTTGCGCTTTTGTTTGCCGATSizeHit CountTotal NormTotal
No Reads
droAna3
T---CATCGCTCTCCGAGCTGTGTTCATCACCAAAGAAGTACTCGGAACTGGAGGTGGAGGCGTTGGTGGCCTGGGAGCCCTCGAAGAAGTGGCGCGCCATAGTGGCCTCCAAGTCAAAGTTGTCCATAGAAAACATTA--------------------------------------------------------------------------------------------------------------------------------------------TCACCCAATTTCGATATTTGCTATTTTTAAATCAGTTG-----------------SizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
.....................................................GGTGGAGGCGTTGGTGG........................................................................................................................................................................................................................................................................1712.002002000
......................................................GTGGAGGCGTTGGTGGCCTG....................................................................................................................................................................................................................................................................2011.001001000
.....................................................GGTGGAGGCGTTGGTGGC.......................................................................................................................................................................................................................................................................1811.001001000
....................................................AGGTGGAGGCGTTGGTGG........................................................................................................................................................................................................................................................................1811.001100000
droBip1
T---CATCGCTTTCCGAGCTGTGTTCATCCCCAAAGAAGTACTCGGAACTGGAGGTGGAGGCATTGGTGGCCTGGGAGCCCTCGAAGAAGTGGCGCGCCATAGTGGCCTCCAAGTCAAAGTTATCCATTGAAAACATTA--------------------------------------------------------------------------------------------------------------------------------------------TCACACAGTTCCGATTTTCGCGATTTGTAAATCTGTTG-----------------SizeHit CountTotal NormTotal
No Reads
dp5
T---CATCGCTCTCCGAGCTGTGCTCGTCGCCAAAGAAGTACTCGGAACTCGAGGTGGAGGCATTGGTGGCCTGCGATCCTTCGAAGAAGTGACGCGCCATGGTGGCCTCCAAGTCAAAGTTGTCCATGGAAAACATCTTGCGC--------------------------------------------------------------------------C----------CG--------------------------AATGCTATG-----------------------------------------GAATCTGTTGCACA-------------SizeHit CountTotal NormTotalV112
Male-body		V043
Embryo		V051
Head		M022
Male-body		M040
Female-body		M059
Embryo		M062
Head
No Reads
droPer2
T---CATCGCTCTCCGAGCTGTGCTCGTCGCCAAAGAAGTACTCGGAACTCGAGGTGGAGGCATTGGTGGCCTGCGATCCTTCGAAGAAGTGACGCGCCATGGTGGCCTCCAAGTCAAAGTTGTCCATGGAAAACATCTTGCGC--------------------------------------------------------------------------C----------CG--------------------------AATGCTATG-----------------------------------------GAATCTGTTGCACA-------------SizeHit CountTotal NormTotalV111
Male-body		V042
Embryo		V050
Head		V057
Head		M021
Embryo		M042
Female-body
No Reads
droWil2
TCTTCATCGCTCTCCGAGCTGTGTTCATCACCAAAGAAGTATTCCGAACTAGAGGTGGAACCATTTGTGGCCTGTGATCCCTCGAAAAAATGACGGGCCATAGTAGCCTCCAAGTCAAAATTATCCATGGAAAACATAA--------------------------------------------------------------------------------------------------------------------------------------------T------------------------------------------------------SizeHit CountTotal NormTotalV117
Male-body		V118
Embryo		V119
Head		M020
Head		M045
Female-body
No Reads
droVir3
T---CGTCGCTCTCCGAGCTGTGCTCGTCGCCAAAGTAGTACTCGGAGCTGGAGTTCGAGGCGTTGGTCGCCTGCGATCCCTCAAAGAAATGCCGAGCCATGGTGGCCTCCAAGTCGAAATTGTCCATGGAAAACATTTTATATTTCTCGCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTTTCTCTCTCTCTCTGGCTTTTCCTTTGTCCTATTA--------------------------AA-----------T--TTAATGTCAGCTAAT---------------------------------------TGTCCGASizeHit CountTotal NormTotalV116
Male-body		V053
Head		V047
Embryo		M027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis
No Reads
droMoj3
T---CGTCGCTCTCCGAGCTGTGCTCATCTCCGAAAAAGTATTCGGAACTGGAGTTCGAGGCATTCGTTGCCTGCGATCCCTCGAAGAAGTGGCGAGCCATCGTCGCTTCCAAGTCGAAATTGTCCATTGAGAACATTTTGCC-----------------------------------------------------------------------------------AATTGCAGTTATCCTTTCTTTTCAATGTTTCAA-----------A--CTAATGTTAG---------------------------------------------------SizeHit CountTotal NormTotalV110
Male-body		V056
Head		V049
Head		V041
Embryo		M046
Female-body		M060
Embryo
No Reads
droGri2
T---CGTCGCTCTCCGAGCTGTGCTCATCTCCGAAAAAGTACTCGGAACTGGAGTTGGAGGCATTGGTTGCCTGCGATCCTTCAAAGAAGTGCCGAGCCATTGTGGCCTCCAAGTCAAAGTTGTCCATGGAAAACATTTTACAT-------------------------------------------------------------------------------------TA--------------------------AATGCTCTTTTTATTT-----GTTGTACAA----------------------------------------TATCTGCSizeHit CountTotal NormTotalV109
Male-body		M041
Female-body
No Reads

Generated: 12/06/2013 at 02:35 PM