ID:

dsi_241

 Coordinate:

3L:3187678-3187734 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-33.0 -32.9 -32.8

Flybase annnotation

Antisense to intron [Dsim\GD13775-in]

No Repeatable elements found

Sense Strand Reads

CTACAAATATGAGCGCGCGAATTAATCAAAAGGCGACTGTTGCCCAACGTCCAAAAAACCAAGCGGTGCAGCTGTTCGCCGGTGGCTCATCGGTGGTTCAGTGGTGCAGTTGGGTCAGCTTTTTGCTCAGTGGTGCACAGCCCACATGCGAGCTGAA
***********************************...(((((((((((((((...(((((..(((((.(((((........)))))))))).)))))...))).)).)))))).))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total O002
Head
 O001
Testis
 SRR618934
Ovary		 M023
head
 M024
male body
 SRR553488
Ovary		 SRR553485
Ovary		 SRR553486
Ovary		 SRR553487
Ovary		 M053
Female-body
........................................................................................ATCGGTGGTTCAGTGGTG................................................... 18 0 1 14.00 14 6 7 0 0 1 0 0 0 0 0
......................................................................................TCATCGGTGGTTCAGTGGT.................................................... 19 0 1 7.00 7 6 1 0 0 0 0 0 0 0 0
........................................................................................ATCGGTGGTTCAGTGG..................................................... 16 0 16 1.25 20 0 0 6 0 0 0 10 3 1 0
......................................................................................GCATCGGTGGTTCAGTGGCGCTG................................................ 23 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1
................................................................................................TTCAGTGGTGCTGTTGGATCTGCT..................................... 24 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......................................................................................TCATCGGTGGTTCAGTGG..................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................................................................................TCATCGGTGGTTCAGTGGTG................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................GGTTCAGTGGTGCAGTT.............................................. 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......................................................................................GCATCGGTGGTTCAGTGGTGC.................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
........................................................................................ATCGGTGGTTCAGTGGTGGAG................................................ 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
........................................................................................ATCGGTGGTTCAGTGGGGC.................................................. 19 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
........................................................................................ATCGGTGGTTCAGTGGAGAA................................................. 20 2 2 1.00 2 0 0 0 2 0 0 0 0 0 0
........................................................................................ATCGGTGGTTCAGTG...................................................... 15 0 17 0.82 14 0 0 13 0 0 0 1 0 0 0
......................................................................................TCATCGGTGGTTCAG........................................................ 15 0 3 0.67 2 0 0 0 0 0 2 0 0 0 0
........................................................................................ATCGGTGGTTCAGTGGAGA.................................................. 19 2 3 0.67 2 0 0 2 0 0 0 0 0 0 0
...................................................................................GGTGCATCGGTGGTTCAGT....................................................... 19 2 9 0.56 5 0 0 5 0 0 0 0 0 0 0
........................................................................................ATCGGTGGTTCAGTGGTTCAG................................................ 21 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0
................................................................................GCTGGTGCATCGGTGGTTCAGT....................................................... 22 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0
........................................................................................ATCGGTGGTTCAGTGGTGCTC................................................ 21 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0
........................................................................................ATCGGTGGTTCAGTGTAGAA................................................. 20 3 9 0.33 3 0 0 0 2 1 0 0 0 0 0
............................GAAGGAGACTGTTGCCAAAC............................................................................................................. 20 3 10 0.30 3 0 0 0 3 0 0 0 0 0 0
.........................................................................................TCGGTGGTTCAGTGG..................................................... 15 0 20 0.30 6 0 0 3 0 0 1 0 2 0 0
.......................................................................................CATCGGTGGTTCAGTGGT.................................................... 18 0 16 0.25 4 0 0 0 0 0 0 1 0 2 1
............................................................................TGCTGTTGGCTCATCGGTGGT............................................................ 21 3 10 0.20 2 0 0 0 0 0 0 0 0 2 0
.......................................................................................CATCGGTGGTTCAGTGG..................................................... 17 0 16 0.19 3 0 0 1 0 0 1 1 0 0 0
.......................................................................................CATCGGTGGTTTAGTG...................................................... 16 1 17 0.18 3 0 0 0 0 0 1 0 0 2 0
......................................................................................TCATCGGTGGTTTAG........................................................ 15 1 12 0.17 2 0 0 0 0 0 1 0 0 1 0
......................................................................................GCATCGGTGGTTCAGTGGTG................................................... 20 1 16 0.13 2 0 0 1 1 0 0 0 0 0 0
.......................................................................................CATCGGTGGTTCAGTG...................................................... 16 0 16 0.13 2 0 0 1 0 0 1 0 0 0 0
......................................................................................GCATCGGTGGTTCAGTGGAGA.................................................. 21 3 18 0.11 2 0 0 0 0 0 0 1 1 0 0
...................................................................................GGTGCATCGGTGGTTCAGTG...................................................... 20 2 9 0.11 1 0 0 1 0 0 0 0 0 0 0
........................................................................................ATCGGTTGTTCAGTGG..................................................... 16 1 19 0.11 2 0 0 1 0 0 0 0 1 0 0
................................................................GGTTCGGCTGTTCGCCG............................................................................ 17 2 20 0.10 2 0 0 0 0 0 2 0 0 0 0
.........................................................................................TCGGTGGTTCAGTGGT.................................................... 16 0 20 0.10 2 0 0 2 0 0 0 0 0 0 0
.........................................................................................TCGGTGGTTCAGTGGAGA.................................................. 18 2 12 0.08 1 0 0 0 0 0 0 0 0 0 1
..................GGATAAATCAGAAGGCGACT....................................................................................................................... 20 3 12 0.08 1 0 0 0 0 0 0 1 0 0 0
.........................................................................................TCGGTGGTTCAGTGAAGC.................................................. 18 2 12 0.08 1 0 0 1 0 0 0 0 0 0 0
...................................................................................GGCTCATCGGTGGCGCA......................................................... 17 2 14 0.07 1 0 0 1 0 0 0 0 0 0 0
........................................................................................ATCGGTGGTTCAGTGGTACA................................................. 20 1 16 0.06 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................CATCGGTGGTTCAGTGGG.................................................... 18 1 16 0.06 1 0 0 0 0 0 0 0 0 0 1
......................................................................................GCATCGGTGGTTCAGTGGTCC.................................................. 21 2 16 0.06 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................CGCATCGGTGGTTCAGT....................................................... 17 1 16 0.06 1 0 0 1 0 0 0 0 0 0 0
........................................................................................ATCGGTGGTTCAGTGGTGGA................................................. 20 1 16 0.06 1 0 0 1 0 0 0 0 0 0 0
.............................................................AGGGGTTCGGCTGTTCGCC............................................................................. 19 3 17 0.06 1 0 0 1 0 0 0 0 0 0 0
......................................................................................GCATCGGTGGTTCAGTGGAGAA................................................. 22 3 17 0.06 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................CATCGGTGGTTCAGT....................................................... 15 0 18 0.06 1 0 0 1 0 0 0 0 0 0 0
......................................................................................GCATCGGTGGTTCAGTGGTTC.................................................. 21 2 18 0.06 1 0 0 0 1 0 0 0 0 0 0
......................................................................................CCATCGGTGGTTCAGT....................................................... 16 1 19 0.05 1 0 0 0 0 0 0 1 0 0 0
........................................................................................ATCGATGGTTCAGTGG..................................................... 16 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0
........................................................................................ATCGGTGGTTCAGTGTAGG.................................................. 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................TCGGTGGTTCAGTGAAGAA................................................. 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................CATCGGTAGTTCAGTA...................................................... 16 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0
..............................................................................................GGTTCGATGGTGTAGTTGG............................................ 19 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0
................................................................GGTTCGGCTGTTCGCCGAT.......................................................................... 19 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

TTCAGCTCGCATGTGGGCTGTGCACCACTGAGCAAAAAGCTGACCCAACTGCACCACTGAACCACCGATGAGCCACCGGCGAACAGCTGCACCGCTTGGTTTTTTGGACGTTGGGCAACAGTCGCCTTTTGATTAATTCGCGCGCTCATATTTGTAG
***********************************...((((.((((((.((.(((...(((((.((((((((((........))))).)))))..)))))...)))))))))))))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR553485
Ovary		 SRR553486
Ovary
..........................TCTGATCAAAAAGCTGACC................................................................................................................ 19 2 2 2.00 4 0 0 0
.....................................................CCACTGAACCACCGATGA...................................................................................... 18 0 1 1.00 1 1 0 0
....................................................ACCACTGAACCACCGA......................................................................................... 16 0 20 0.10 2 0 1 1
.............................................................................................................................CTTTGGATTAATTCGC................ 16 1 14 0.07 1 0 0 0
........................CATCTGATCAAAAAGCTGACC................................................................................................................ 21 3 16 0.06 1 0 0 0
............................................................ACCACCGCTGAGCTACC................................................................................ 17 2 20 0.05 1 0 0 0
..................TGTGCACCACTGAGCAAAT........................................................................................................................ 19 1 20 0.05 1 0 0 0
......................................................CACTGAACCACCGATA....................................................................................... 16 1 20 0.05 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 3L:3187628-3187784 - dsi_241 CTACAAATATGAGCGCGCGAATTAATCAAAAGGC------------------------------------GAC----TGTTGCCC----AACG-T------CCAAA--AAACCAAGCGGTGCAGCTGTT-CG-----CCGG---------TGGCTCATCG--GTGGTTC-AGTGGTGCA------GTTGGGTCAGCTT-TTT--GCT-CAGTGGTGCA----------------CAGCCCACATGCG-AG--CTGAA
droSec2 scaffold_2:3635596-3635752 - CTACAAATATGAGCGCGCGAATTAATCAAAAGGC------------------------------------GAC----GGTTGCCC----AACG-T------CCAAA--AAAACAAGCGGTGCAGCTGTT-CG-----CCGG---------TGGCTCATCG--GTGGTTC-AGTGGTGCA------GTTGGGTCAGCTT-TTT--ACT-CAGTGGTGCA----------------CAGCCCACATGCG-AG--CTGAA
dm3 chr3L:3649446-3649602 - CTACAAATATGAGCGCGCGAATTAATCAAAAGGC------------------------------------GAC----TGTTGCCC----AACG-T------CCAAA--AAACCAAGCGGCGCAGCTGTT-CG-----CCGG---------TGGCTCATCG--GTGGTTC-AGTGGTGCA------GTTGGGTCAGCTT-TTT--GCT-CAGTGGTGCA----------------CAGCCCACATGCG-AG--CTGAA
droEre2 scaffold_4784:6344230-6344386 - CTACAAATATGAGCGCGCGAATTAATCAAAAGGC------------------------------------GAC----TGTTGCCC----AACG-T------CCCGA--AAAGCAAGCGGTGCAGCTGTT-CG-----CCGG---------TGGCTCATCG--GTGGTTC-GGTGGTGCA------GTTGGGTCAGCCT-TTT--GCG-CAGTGGTGCA----------------CAGCCCACATGCG-AG--CTGAA
droYak3 3L:4198548-4198704 - CTACAAATATGAGCGCGCGAATTAATCAAAAGGC------------------------------------GAC----TGTTGCCC----AACG-T------CCCGA--AAAGCAAGCGGTGCAGCTGTT-CG-----CCGG---------TGGCTCATCG--GTGGTTC-AGTGGTGCA------GTTGGGTCAGCCT-TTT--GCT-CGGCGGTGCA----------------CAGCCCACATGCG-AG--CTGAA
droEug1 scf7180000409466:1389668-1389822 - CTACAAATATGAGCGCGCGAATTAATCAAAAGGC------------------------------------GAC----GGTTGCCC----AACG-T------CCCGA--AAGCCGA---GTGCAGCTGTT-TG-----CCGG---------TGGCTCATCG--GCGGTTC-AGTGGTGCA------GTTGGGTCACTTT-TTT--GTTCCAGTGGTGCA----------------CAGCCCACATGCG-AG--CTGAA
droBia1 scf7180000302428:285079-285235 - CTACAAATATGAGCGCGCGAATTAATCAAAAGGC------------------------------------GAC----GGTTGCCC----AACG-T------CCCGA--AAACCGAGTGGTGCAGCTGTT-CG-----CCGG---------TGGCTCATCG--GCGGTTC-AGTGGTGCA------GTTGGGTCAGTTT-TTT--GCT-CAGTGGTGCG----------------CAGCCCACATGCG-AG--CTGAA
droTak1 scf7180000415785:199686-199858 + CTACAAATATGAGCGCGCGAATTAATCAAAAGGC------------------------------------GAC----GGTTGCCC----AACG-T------CCCGA--AAACCGAGTGGTGCAGCTGTT-CG-----CCGG---------TGGCTCATCG--GCGGTTC-AGTGGTGCA------GTTGGGTCAGTTT-TTT--GCT-CAGTGGTGCTCAGCACACAGCCCATTCAGCCCACATGCG-AG--CTGAA
droEle1 scf7180000491249:1515749-1515910 + CTACAAATATGAGCGCGCGAATTAATCAAAAGGC------------------------------------GAC----G-TTGGGCAACCAACG-T------CCCGAA-AAACCAAGTGGTGCAGCTGTT-CG-----CCGG---------TGGCTCATCG--GTGGTTC-AGTGGTGCA------CTTGGTTCCGTTTTTTT--GCT-CAGTGGTGCT----------------CAGCCCACATGCG-AG--CTGAA
droRho1 scf7180000777257:31145-31304 + CTACAAATATGATTGCGCGAATTAATCAAAAGGC------------------------------------GAC----GGTTGCCC----AACG-T------CCCGAAAAAACCGAGTGGTGCAGCTGTT-CG-----CCGG---------TGGCTCATCG--GTGGTTC-AGTGGTGCA------GTTGGGTCGGCTTTTTT--GAT-CAGTGGTGCA----------------CAGCCCACATGCG-AG--CTGAA
droFic1 scf7180000453052:8550-8680 - CTACAAATATGAGCGCGCGAATTAATCAAAAGGC------------------------------------GGC----GGTTGCCC----AACG-A------CCCGA--CAACCGAGTGGTGCAGCTGTT-CG-----CCGG---------TGGCTCATCG--GAGGTTC-AGTGGTGCA------GTGGG----------------------------------------------GCCCACATGCG-AG--CTGAG
droKik1 scf7180000302577:590300-590470 + CTACAAATATGAGCGCGCGAATTAATCAAAAGGC------------------------------------GAC----GGTTGCCC----AACG-T------CCCAAAAAAACCAGAGAGTGCAGCTGCT-TG-----CCAG---------TGGCTCATCG--GTGCTTC-AGTA---CATATATATTTATAT----TT-TTTAAGCTTTAGTTTTTCGCAGAAAA--------GCAGCCCACATGCG-AGGACTGAG
droAna3 scaffold_13337:9795182-9795316 + CTACAAATATGAGTGCGCGAATTAATCAAAAGGC------------------------------------GAC----GGTTGCCC----AACGAT------CCCGA------------GTGCAGCTG---CG-----GTAG---------TGGCTCATCT--GTGGATC-AGTGGTGCA------GTGGGCTTAGC------------------GGCT----------------CGGCCCACATGCAGACGACTGAA
droBip1 scf7180000396569:1555759-1555901 - CTACAAATATGAGTGCGCGAATTAATCAAAAGGC------------------------------------GAC----GGTTGCCC----AACGAT------CCCGA------------GTGCAGCTGTGGTGCCGCGGCAG---------TGGCTCATCG--GTGGATC-AGTGGTGCA------GTGGGCTCAGC------------------GGCT----------------CGGCCCACATGCAGACGACTGAA
droWil2 scf2_1100000004768:1494152-1494291 - CTACAAATATGAGCTCGCGAATTAATCAAAAGCCTTTTTC--CATAGTTTGTCTGACTGTCTGTCTGCCCACC----GATTGCCCAACCATCA-A------CCCAACCAGCCCAA---GCACAGCTGA--CG-----CCAGTGGCTGATTTAACTCATCG--GTG--------------------------------------------------------------------------------------------
droVir3 scaffold_13049:4435868-4435992 + CTACAAATATGAGCGCGCGAATTAATCAAAAGCCTTTTTT-CCTC-----------------------TGTACGTTCGGTTGCTC----AACG-C------TACA---AAATAAAGCAGCGCAGCTGTG-CA-----CCAC---------CAGCTCATCG--TCAGCC---ATGGCGGA------GCTG--------------------------------------------------------------------
droMoj3 scaffold_6680:2855864-2855983 + CTACAAATATGAGCGCGCGAATTAATCAAAAGCCTTTTTTTGCGC-----------------------CGCTC----GCTTGCTC----AAC-----------------AAGC--GCAGCACAGCTGC--CG---CTGCAT---------TGGCTCATCGTGGTGGTGCTAGCGGTGCT------GGTGG-------------------------------------------------------------------
droGri2 scaffold_15110:10404779-10404910 - CTACAAATATGAGCGCGCGAATTAATCAAAAGCCTTTTTTTCCGC-----------------------CGT---TTCGGTTGCTC----AACGCTCTTTCGAACG---AAATAAGGCAGCGCAGCTGTG-CACCAC-TCAG---------TGGCTCATCG--TCAG--C-AGTGGTGCT------GT----------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
CTACAAATATGAGCGCGCGAATTAATCAAAAGGC------------------------------------GAC----TGTTGCCC----AACG-T------CCAAA--AAACCAAGCGGTGCAGCTGTT-CG-----CCGG---------TGGCTCATCG--GTGGTTC-AGTGGTGCA------GTTGGGTCAGCTT-TTT--GCT-CAGTGGTGCA----------------CAGCCCACATGCG-AG--CTGAASizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
............................................................................................................................................................ATCG--GTGGTTC-AGTGGTG................................................................................18114.0014001076000000
..........................................................................................................................................................TCATCG--GTGGTTC-AGTGGT.................................................................................1917.007000016000000
............................................................................................................................................................ATCG--GTGGTTC-AGTGG..................................................................................16161.25200000000103106
..........................................................................................................................................................TCATCG--GTGGTTC-AGTGG..................................................................................1811.001010000000000
..........................................................................................................................................................TCATCG--GTGGTTC-AGTGGTG................................................................................2011.001000001000000
....................................................................................................................................................................GGTTC-AGTGGTGCA------GTT.....................................................................1711.001000000000001
............................................................................................................................................................ATCG--GTGGTTC-AGTG...................................................................................15170.82140000000100013
..........................................................................................................................................................TCATCG--GTGGTTC-AG.....................................................................................1530.672000000000020
.............................................................................................................................................................TCG--GTGGTTC-AGTGG..................................................................................15200.306000000002013
...........................................................................................................................................................CATCG--GTGGTTC-AGTGGT.................................................................................18160.254000000110200
...........................................................................................................................................................CATCG--GTGGTTC-AGTGG..................................................................................17160.193000000010011
...........................................................................................................................................................CATCG--GTGGTTC-AGTG...................................................................................16160.132000000000011
.............................................................................................................................................................TCG--GTGGTTC-AGTGGT.................................................................................16200.102000000000002
...........................................................................................................................................................CATCG--GTGGTTC-AGT....................................................................................15180.061000000000001
droSec2
CTACAAATATGAGCGCGCGAATTAATCAAAAGGC------------------------------------GAC----GGTTGCCC----AACG-T------CCAAA--AAAACAAGCGGTGCAGCTGTT-CG-----CCGG---------TGGCTCATCG--GTGGTTC-AGTGGTGCA------GTTGGGTCAGCTT-TTT--ACT-CAGTGGTGCA----------------CAGCCCACATGCG-AG--CTGAASizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
............................................................................................................................................................ATCG--GTGGTTC-AGTGGTG................................................................................18119.001900163
..........................................................................................................................................................TCATCG--GTGGTTC-AGTGG..................................................................................1812.0020002
...........................................................................................................................................................CATCG--GTGGTTC-AGTGGTG................................................................................1912.0020020
..........................................................................................................................................................TCATCG--GTGGTTC-AGTGGT.................................................................................1911.0010001
...........................................................................................................................................................CATCG--GTGGTTC-AGTGGT.................................................................................18160.811312010
droEre2
CTACAAATATGAGCGCGCGAATTAATCAAAAGGC------------------------------------GAC----TGTTGCCC----AACG-T------CCCGA--AAAGCAAGCGGTGCAGCTGTT-CG-----CCGG---------TGGCTCATCG--GTGGTTC-GGTGGTGCA------GTTGGGTCAGCCT-TTT--GCG-CAGTGGTGCA----------------CAGCCCACATGCG-AG--CTGAASizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
No Reads
droYak3
CTACAAATATGAGCGCGCGAATTAATCAAAAGGC------------------------------------GAC----TGTTGCCC----AACG-T------CCCGA--AAAGCAAGCGGTGCAGCTGTT-CG-----CCGG---------TGGCTCATCG--GTGGTTC-AGTGGTGCA------GTTGGGTCAGCCT-TTT--GCT-CGGCGGTGCA----------------CAGCCCACATGCG-AG--CTGAASizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
..........................................................................................................................................................TCATCG--GTGGTTC-AGTGGT.................................................................................1911.0010000001
..........................................................................................................................................................TCATCG--GTGGTTC-AGTGG..................................................................................1811.0010000010
...........................................................................................................................................................CATCG--GTGGTTC-AGTGGT.................................................................................18160.5690000090
droEug1
CTACAAATATGAGCGCGCGAATTAATCAAAAGGC------------------------------------GAC----GGTTGCCC----AACG-T------CCCGA--AAGCCGA---GTGCAGCTGTT-TG-----CCGG---------TGGCTCATCG--GCGGTTC-AGTGGTGCA------GTTGGGTCACTTT-TTT--GTTCCAGTGGTGCA----------------CAGCCCACATGCG-AG--CTGAASizeHit CountTotal NormTotal
No Reads
droBia1
CTACAAATATGAGCGCGCGAATTAATCAAAAGGC------------------------------------GAC----GGTTGCCC----AACG-T------CCCGA--AAACCGAGTGGTGCAGCTGTT-CG-----CCGG---------TGGCTCATCG--GCGGTTC-AGTGGTGCA------GTTGGGTCAGTTT-TTT--GCT-CAGTGGTGCG----------------CAGCCCACATGCG-AG--CTGAASizeHit CountTotal NormTotal
No Reads
droTak1
CTACAAATATGAGCGCGCGAATTAATCAAAAGGC------------------------------------GAC----GGTTGCCC----AACG-T------CCCGA--AAACCGAGTGGTGCAGCTGTT-CG-----CCGG---------TGGCTCATCG--GCGGTTC-AGTGGTGCA------GTTGGGTCAGTTT-TTT--GCT-CAGTGGTGCTCAGCACACAGCCCATTCAGCCCACATGCG-AG--CTGAASizeHit CountTotal NormTotal
No Reads
droEle1
CTACAAATATGAGCGCGCGAATTAATCAAAAGGC------------------------------------GAC----G-TTGGGCAACCAACG-T------CCCGAA-AAACCAAGTGGTGCAGCTGTT-CG-----CCGG---------TGGCTCATCG--GTGGTTC-AGTGGTGCA------CTTGGTTCCGTTTTTTT--GCT-CAGTGGTGCT----------------CAGCCCACATGCG-AG--CTGAASizeHit CountTotal NormTotal
No Reads
droRho1
CTACAAATATGATTGCGCGAATTAATCAAAAGGC------------------------------------GAC----GGTTGCCC----AACG-T------CCCGAAAAAACCGAGTGGTGCAGCTGTT-CG-----CCGG---------TGGCTCATCG--GTGGTTC-AGTGGTGCA------GTTGGGTCGGCTTTTTT--GAT-CAGTGGTGCA----------------CAGCCCACATGCG-AG--CTGAASizeHit CountTotal NormTotal
No Reads
droFic1
CTACAAATATGAGCGCGCGAATTAATCAAAAGGC------------------------------------GGC----GGTTGCCC----AACG-A------CCCGA--CAACCGAGTGGTGCAGCTGTT-CG-----CCGG---------TGGCTCATCG--GAGGTTC-AGTGGTGCA------GTGGG----------------------------------------------GCCCACATGCG-AG--CTGAGSizeHit CountTotal NormTotal
No Reads
droKik1
CTACAAATATGAGCGCGCGAATTAATCAAAAGGC------------------------------------GAC----GGTTGCCC----AACG-T------CCCAAAAAAACCAGAGAGTGCAGCTGCT-TG-----CCAG---------TGGCTCATCG--GTGCTTC-AGTA---CATATATATTTATAT----TT-TTTAAGCTTTAGTTTTTCGCAGAAAA--------GCAGCCCACATGCG-AGGACTGAGSizeHit CountTotal NormTotal
No Reads
droAna3
CTACAAATATGAGTGCGCGAATTAATCAAAAGGC------------------------------------GAC----GGTTGCCC----AACGAT------CCCGA------------GTGCAGCTG---CG-----GTAG---------TGGCTCATCT--GTGGATC-AGTGGTGCA------GTGGGCTTAGC------------------GGCT----------------CGGCCCACATGCAGACGACTGAASizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
No Reads
droBip1
CTACAAATATGAGTGCGCGAATTAATCAAAAGGC------------------------------------GAC----GGTTGCCC----AACGAT------CCCGA------------GTGCAGCTGTGGTGCCGCGGCAG---------TGGCTCATCG--GTGGATC-AGTGGTGCA------GTGGGCTCAGC------------------GGCT----------------CGGCCCACATGCAGACGACTGAASizeHit CountTotal NormTotal
No Reads
droWil2
CTACAAATATGAGCTCGCGAATTAATCAAAAGCCTTTTTC--CATAGTTTGTCTGACTGTCTGTCTGCCCACC----GATTGCCCAACCATCA-A------CCCAACCAGCCCAA---GCACAGCTGA--CG-----CCAGTGGCTGATTTAACTCATCG--GTG--------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalV117
Male-body		V118
Embryo		V119
Head		M020
Head		M045
Female-body
No Reads
droVir3
CTACAAATATGAGCGCGCGAATTAATCAAAAGCCTTTTTT-CCTC-----------------------TGTACGTTCGGTTGCTC----AACG-C------TACA---AAATAAAGCAGCGCAGCTGTG-CA-----CCAC---------CAGCTCATCG--TCAGCC---ATGGCGGA------GCTG--------------------------------------------------------------------SizeHit CountTotal NormTotalV116
Male-body		V053
Head		V047
Embryo		M027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis
No Reads
droMoj3
CTACAAATATGAGCGCGCGAATTAATCAAAAGCCTTTTTTTGCGC-----------------------CGCTC----GCTTGCTC----AAC-----------------AAGC--GCAGCACAGCTGC--CG---CTGCAT---------TGGCTCATCGTGGTGGTGCTAGCGGTGCT------GGTGG-------------------------------------------------------------------SizeHit CountTotal NormTotalV110
Male-body		V056
Head		V049
Head		V041
Embryo		M046
Female-body		M060
Embryo
No Reads
droGri2
CTACAAATATGAGCGCGCGAATTAATCAAAAGCCTTTTTTTCCGC-----------------------CGT---TTCGGTTGCTC----AACGCTCTTTCGAACG---AAATAAGGCAGCGCAGCTGTG-CACCAC-TCAG---------TGGCTCATCG--TCAG--C-AGTGGTGCT------GT----------------------------------------------------------------------SizeHit CountTotal NormTotalV109
Male-body		M041
Female-body
No Reads

Generated: 12/06/2013 at 02:35 PM