ID:

dsi_221

 Coordinate:

chrU_M_3090:3624-3707 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.4 -16.3 -16.3 -13.5

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TTTCGTTGGCGTAGTTTATTATAACTGACCCATTAACAATGAGGTCAGTGCCGTTTGTCAAGGAGATTATAAGGTTGTCAACGTTGAACGCAAAAATGTAGCCCGCTTCTGCCTCGAACACATCGGCGATAGGGACGGTCTCTCGTACATTGCAAGAACCATTTTCGTCGTTTAGAAGGTGTGC
***************************************************.(((((...((((((......(((((.((...(((....)))...)))))))....))).))))))))......((((.(((.....))).))))..************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Ovary		 SRR553488
Ovary		 SRR553485
Ovary		 SRR553487
Ovary		 SRR618934
Ovary		 O001
Testis
 M025
embryo
 O002
Head
 M053
Female-body
..................................................................TTATAAGGTTGTCAACGTTGAACGCAAA.......................................................................................... 28 0 1 98.00 98 56 25 12 5 0 0 0 0 0
.............................................................................................................TGCCTCGAACACATCGGCGATAGGGA................................................. 26 0 1 68.00 68 33 14 16 4 1 0 0 0 0
.................................................................................................................................................TACATTGCAAGAACCATTTTCGTCGTT............ 27 0 2 50.50 101 60 6 31 2 0 0 2 0 0
..................................................................TTATAAGGTTGTCAACGTTGAACGCAAAAA........................................................................................ 30 0 1 26.00 26 17 0 7 2 0 0 0 0 0
...................................................................TATAAGGTTGTCAACGTTGAACGCAAA.......................................................................................... 27 0 1 22.00 22 16 3 1 2 0 0 0 0 0
..................................................................TTATAAGGTTGTCAACGTTGAACGCAA........................................................................................... 27 0 1 18.00 18 12 4 2 0 0 0 0 0 0
..................................................................TTATAAGGTTGTCAACGTTGAACGCAAAA......................................................................................... 29 0 1 18.00 18 14 2 1 1 0 0 0 0 0
...................................................................TATAAGGTTGTCAACGTTGAACGCAAAAA........................................................................................ 29 0 1 15.00 15 9 1 4 1 0 0 0 0 0
...........................................................................................................TCTGCCTCGAACACATCGGCGATAGGGA................................................. 28 0 1 12.00 12 5 5 2 0 0 0 0 0 0
................................................TGCCGTTTGTCAAGGAGATTATAAGG.............................................................................................................. 26 0 1 12.00 12 6 2 4 0 0 0 0 0 0
................................................TGCCGTTTGTCAAGGAGATTATAAGGT............................................................................................................. 27 0 1 10.00 10 5 2 0 3 0 0 0 0 0
......................................................................................................................................................TGCAAGAACCATTTTCGTCGTTTAGA........ 26 0 2 5.00 10 3 6 1 0 0 0 0 0 0
......................................................................................................................................................TGCAAGAACCATTTTCGTCGTTTAGAAGG..... 29 0 2 5.00 10 7 0 2 1 0 0 0 0 0
..................................................CCGTTTGTCAAGGAGATT.................................................................................................................... 18 0 4 5.00 20 0 0 0 0 0 8 0 12 0
..................................................................TTATAAGGTTGTCAACGTTGAACGC............................................................................................. 25 0 1 4.00 4 1 1 1 1 0 0 0 0 0
..........................................................................................................TTCTGCCTCGAACACATCGGCGATAGGGA................................................. 29 0 1 4.00 4 2 0 1 1 0 0 0 0 0
.....................................................TTTGTCAAGGAGATTATAAGGTTGTC......................................................................................................... 26 0 1 4.00 4 3 1 0 0 0 0 0 0 0
.....................................................................................................................................................TTGCAAGAACCATTTTCGTCGTT............ 23 0 2 3.50 7 3 1 3 0 0 0 0 0 0
...................................................................TATAAGGTTGTCAACGTTGAACGCAA........................................................................................... 26 0 1 3.00 3 2 0 1 0 0 0 0 0 0
............................................TCAGTGCCGTTTGTCAAGGAGATTATA................................................................................................................. 27 0 1 3.00 3 1 2 0 0 0 0 0 0 0
..........................................................................................................................TCGGCGATAGGGACGGTCTCTCGTACAT.................................. 28 0 1 3.00 3 3 0 0 0 0 0 0 0 0
.....................................................................TAAGGTTGTCAACGTTGAACGCAAA.......................................................................................... 25 0 4 3.00 12 7 2 3 0 0 0 0 0 0
..............................................................................................................................................TCGTACATTGCAAGAACCATTTTCGTCGTT............ 30 0 2 3.00 6 5 0 1 0 0 0 0 0 0
..................................................................TTATAAGGTTGTCAACGTTGAACGCA............................................................................................ 26 0 1 3.00 3 1 2 0 0 0 0 0 0 0
......................................................................................................................................................TGCAAGAACCATTTTCGTCGTT............ 22 0 2 2.50 5 3 0 2 0 0 0 0 0 0
.................................................................................................................................................TACATTGCAAGAACCATTTTCGTCGT............. 26 0 2 2.50 5 2 0 2 1 0 0 0 0 0
................TATTATAACTGACCCATTAACAATGAG............................................................................................................................................. 27 0 4 2.25 9 6 1 2 0 0 0 0 0 0
.......................................................TGTCAAGGAGATTATAAGGTTGTCAAC...................................................................................................... 27 0 1 2.00 2 1 0 0 1 0 0 0 0 0
..................................................................TTATAAGGTTGTCAACGTTGAAC............................................................................................... 23 0 1 2.00 2 1 1 0 0 0 0 0 0 0
...................................................................................................................................................CATTGCAAGAACCATTTTCGTCGTT............ 25 0 2 2.00 4 4 0 0 0 0 0 0 0 0
...................................................................TATAAGGTTGTCAACGTTGAACGCA............................................................................................ 25 0 1 2.00 2 1 0 0 1 0 0 0 0 0
....................................................................ATAAGGTTGTCAACGTTGAACGCAAA.......................................................................................... 26 0 1 2.00 2 1 1 0 0 0 0 0 0 0
..................................................CCGTTTGTCAAGGAGATTA................................................................................................................... 19 0 1 2.00 2 0 0 0 0 0 2 0 0 0
...................................................CGTTTGTCAAGGAGATTATAAGGT............................................................................................................. 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0
..................................................CCGTTTGTCAAGGAGATTATAAGG.............................................................................................................. 24 0 1 2.00 2 0 2 0 0 0 0 0 0 0
............................................TCAGTGCCGTTTGTCAAGGAGATTA................................................................................................................... 25 0 1 2.00 2 0 1 0 1 0 0 0 0 0
..........................................................................................................TTCTGCCTCGAACACATCGGCGATAGG................................................... 27 0 4 1.75 7 0 5 0 1 0 0 0 0 1
................TATTATAACTGACCCATTAACAATGA.............................................................................................................................................. 26 0 4 1.50 6 2 4 0 0 0 0 0 0 0
.....................................................................................................................................................TTGCAAGAACCATTTTCGTCGTTTAGA........ 27 0 2 1.50 3 2 1 0 0 0 0 0 0 0
......................................................................................................................................................TGCAAGAACCATTTTCGTCGTTTAGAA....... 27 0 2 1.50 3 0 1 0 0 0 0 2 0 0
.......................................................TGTCAAGGAGATTATAAGGTTGTC......................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................................TGTAGCCCGCTTCTGCCTCGAACACATC............................................................ 28 0 4 1.00 4 1 2 1 0 0 0 0 0 0
.................................................................................................................TCGAACACATCGGCGATAGGGACGGT............................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................TTATAAGGTTGTCAAAGTTGAACGCAA........................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................AGAACCATTTTCGTCGTTTAGAAGG..... 25 0 2 1.00 2 0 2 0 0 0 0 0 0 0
..............................................................................................................................................TCGTACATTGCAAGAACCATTTTCGTC............... 27 0 2 1.00 2 0 2 0 0 0 0 0 0 0
.....................................................................TAAGGTTGTCAACGTTGAACGCAAAAA........................................................................................ 27 0 4 1.00 4 2 1 0 0 1 0 0 0 0
..................................................................TTATAAGGTTGTCAACGTTGAA................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.................................................................................................................TCGAACACATCGGCGATAGGGA................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................AACACATCGGCGATAGGGACGGTCTCTCG....................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................ACATCGGCGATAGGGACGGTCTCTCG....................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................TCGAACACATCGGCGATAGGGACG............................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................................................................................CGAACACATCGGCGATAGGGA................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................CCGTTTGTCAAGGAGATTATAAGGT............................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................................GAACACATCGGCGATAGGGACGGTCTC.......................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................TATAAGGTTGTCAACGTTGAACACAAA.......................................................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0
..............................................AGTGCCGTTTGTCAAGGAGATTATAAGG.............................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................AGGGACGGTCTCTCGTACATTGCAAGA........................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................................TGATAAGGTTGTCAACGTTGAACGCAAAA......................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................TTTGTCAAGGAGATTATAAGGTTGT.......................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0
.............................................................................................................TTCCTCGAACACATCGGCGATAGGGA................................................. 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0
..................................................................TTATAAGGTTGTCAACGTTGAACGGAAA.......................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................CGTTTGTCAAGGAGATTATAAGGTT............................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................AAGAACCATTTTCGTCGTTTAGAAGG..... 26 0 2 1.00 2 2 0 0 0 0 0 0 0 0
..................................................................TTATAAGGTTGTCAACGTTGAACGAAAA.......................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................GCCGTTTGTCAAGGAGATTATAAGGT............................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................TGCCTGGAACACATCGGCGATAGGGA................................................. 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................TGCCGTTTGTCAAGGAGATTATAAGGTA............................................................................................................ 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.................................................................ATTATAAGGTTGTCAACGTTGAACGCAA........................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................ATTATAAGGTTGTCAACGTTGAACGCA............................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................AGGGACGGTCTCTCGTACATTGCAAGAACC........................ 30 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.............................................CAGTGCCGTTTGTCAAGGAGATTATA................................................................................................................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0
...............................................................AGATTATAAGGTTGTCAACGTTGAACGC............................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................TCGGCGATAGGGACGGTCTCTCGTA..................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................................................CATCGGCGATAGGGACGGTCTCTC........................................ 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.........................................................TCAAGGAGATTATAAGGTTGT.......................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.............................................................................................................TGCCTCGAACACATCGGCGATAGGGACGGT............................................. 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................AGAACCATTTTCGTCGTT............ 18 0 2 1.00 2 0 0 0 0 2 0 0 0 0
...................................................CGTTTGTCAAGGAGATTATA................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..................................................................TTATAAGGTTGTCAACGTTGAACG.............................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................ATCGGCGATTGGGACG............................................... 16 1 2 1.00 2 0 0 0 2 0 0 0 0 0
.....................................AATGAGGTCAGTGCCGTTTGTCAAGGAGA...................................................................................................................... 29 0 3 1.00 3 2 0 1 0 0 0 0 0 0
.............................................................................................................TGCCTCGAACACATCGGCGATAGG................................................... 24 0 4 1.00 4 1 0 1 2 0 0 0 0 0
...............................................................................................................................................CGTACATTGCAAGAACCATTTTCGTCGTT............ 29 0 2 1.00 2 2 0 0 0 0 0 0 0 0
....................................................................ATAAGGTTGTCAACGTTGAACGCAAAAA........................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................TCTTCCTCGAACACATCGGCGATAGGGA................................................. 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0
..............................................................................................................................CGATTGGGACGGTCT........................................... 15 1 3 1.00 3 0 3 0 0 0 0 0 0 0
.................................................................................................................................................................TTTTCGTCGTTTAGAAGGTGTGC 23 0 3 0.67 2 0 0 2 0 0 0 0 0 0
.......................................TGAGGTCAGTGCCGTTTGTCAAGGAGA...................................................................................................................... 27 0 3 0.67 2 0 0 0 1 1 0 0 0 0
.................................................................................................................................................TACATTGCAAGAACCATTTTCGTCGTTT........... 28 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................TACATTGCAAGAACCATTTTCGGCGTT............ 27 1 2 0.50 1 0 0 1 0 0 0 0 0 0
...............TTATTATAACTGACCCATTAACAATGA.............................................................................................................................................. 27 0 4 0.50 2 1 1 0 0 0 0 0 0 0
...........................................................................TGTCAACGTTGAACGCAAAAATGTAGC.................................................................................. 27 0 4 0.50 2 1 1 0 0 0 0 0 0 0
............................................................................................................................................TCTCGTACATTGCAAGAACCATTTTCGTCGTT............ 32 0 2 0.50 1 0 0 1 0 0 0 0 0 0
..............................................................................................................................................TCGTACATTGCAAGAACCATTTTCGTCG.............. 28 0 2 0.50 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................TCTCGTACATTGCAAGAACCATTTTC.................. 26 0 2 0.50 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................ATTGCAAGAACCATTTTCGTCGTTTAGA........ 28 0 2 0.50 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................TCGGAGATAGGGACG............................................... 15 1 2 0.50 1 0 0 0 1 0 0 0 0 0
................................................................................................................................................GTACATTGCAAGAACCATTTTCGTCGTT............ 28 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................CGATCGGGACGGTCTC.......................................... 16 1 2 0.50 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................TACATTGCAAGAACCATTTTCCTCGTT............ 27 1 2 0.50 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................CATTGCAAGAACCATTTTCGTC............... 22 0 2 0.50 1 0 0 1 0 0 0 0 0 0
............................................................................................................................................TCTCGTACATTGCAAGAACCATTT.................... 24 0 2 0.50 1 0 0 0 1 0 0 0 0 0
..............................................................................................................................................TCGTACATTGCAAGAACCATTTTCGTCGT............. 29 0 2 0.50 1 0 0 1 0 0 0 0 0 0
......................................................................................................................................................TGCAAGAACCATTTTCGTCGTTT........... 23 0 2 0.50 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................CAAGAACCATTTTCGTCGTTTAGAAGG..... 27 0 2 0.50 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................TACATTGCAAGAACCATTTTCGTC............... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................TACATTGCGAGAACCATTTTCGTCGTT............ 27 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.....................................................................TAAGGTTGTCAACGTTGA................................................................................................. 18 0 4 0.50 2 0 0 0 2 0 0 0 0 0
..........................................................................................................................TCGTCGATTGGGACGGTCT........................................... 19 2 2 0.50 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................TTGCAAGAACCATTTTCGTCGTTTAGAAA...... 29 1 2 0.50 1 0 0 0 0 0 0 0 0 1
......................................................................................................................................................TGCAAGAACCATTTTCGTCGTTTAG......... 25 0 2 0.50 1 0 0 0 1 0 0 0 0 0
.......................................TGAGGTCAGTGCCGTTTGTCAAGGAG....................................................................................................................... 26 0 3 0.33 1 0 0 0 1 0 0 0 0 0
.................................TAACAATGAGGTCAGTGCCGTTTGT.............................................................................................................................. 25 0 3 0.33 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................CATTTTCGTCGTTTAGAAGGTGTGC 25 0 3 0.33 1 0 0 1 0 0 0 0 0 0
.........................................AGGTCAGTGCCGTTTGTCAAGGAGA...................................................................................................................... 25 0 3 0.33 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................TTTCGTCGTTTAGAAGGTGTG. 21 0 3 0.33 1 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................CCATTTTCGTCGTTTAGAAGGTGTGC 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................ACCATTTTCGTCGTTTAGAAGGTGTG. 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................AACAATGAGGTCAGTGCCGTTTGTCAA........................................................................................................................... 27 0 3 0.33 1 0 1 0 0 0 0 0 0 0
...........................................GTCAGTGCCGTTTGTCAAGGAGA...................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.....................................AATGAGGTCAGTGCCGTTTGTCAA........................................................................................................................... 24 0 3 0.33 1 0 0 1 0 0 0 0 0 0
...................................................................................TTGAACGCAAAAATGTAGCCC................................................................................ 21 0 4 0.25 1 0 0 0 0 0 0 0 0 1
...............TTATTATAACTGACCCATTAACAATG............................................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0
.TTCGTTGGCGTAGTTTATTATAACTGA............................................................................................................................................................ 27 0 4 0.25 1 0 0 0 1 0 0 0 0 0
................................................TGCCGTTTGTCAAGGAGA...................................................................................................................... 18 0 4 0.25 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................TGGTCGATTGGGACGGTCTC.......................................... 20 3 4 0.25 1 0 1 0 0 0 0 0 0 0
....................................................................................TGAACGCAAAAATGTAGCCCGCTTC........................................................................... 25 0 4 0.25 1 0 1 0 0 0 0 0 0 0
................TATTATAACTGACCCATTAACAATGAGG............................................................................................................................................ 28 0 4 0.25 1 0 0 0 1 0 0 0 0 0
...........................................................................TGTCAACGTTGAACGCAAAAATGTAG................................................................................... 26 0 4 0.25 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................GATTGGGACGGTCTC.......................................... 15 1 4 0.25 1 0 1 0 0 0 0 0 0 0
................................................TGCCGTTTGTCAAGGAGATT.................................................................................................................... 20 0 4 0.25 1 0 1 0 0 0 0 0 0 0
..TCGTTGGCGTAGTTTATTATAACTGACC.......................................................................................................................................................... 28 0 4 0.25 1 0 0 0 0 0 0 0 0 1
......................................................................AAGGTTGTCAACGTTGAACGCAAAAA........................................................................................ 26 0 4 0.25 1 0 1 0 0 0 0 0 0 0
................................................................................................TGTAGCCCGCTTCTGCCTCGAACACAT............................................................. 27 0 4 0.25 1 1 0 0 0 0 0 0 0 0
.......................................................................................................CGCTTCTGCCTCGAACACATCGGCGA....................................................... 26 0 4 0.25 1 0 1 0 0 0 0 0 0 0
......TGGCGTAGTTTATTATAACT.............................................................................................................................................................. 20 0 4 0.25 1 0 0 0 1 0 0 0 0 0
.....................................................................................................CCCGCTTCTGCCTCGAACACATCGGCGA....................................................... 28 0 4 0.25 1 0 1 0 0 0 0 0 0 0
TTTCGTTGGCGTAGTTTATTATAA................................................................................................................................................................ 24 0 4 0.25 1 0 1 0 0 0 0 0 0 0
..........................................................................TTGTCAACGTTGAACGCAAAAATGT..................................................................................... 25 0 4 0.25 1 0 1 0 0 0 0 0 0 0
..TCGTTGGCGTAGTTTATTATAA................................................................................................................................................................ 22 0 4 0.25 1 1 0 0 0 0 0 0 0 0
..........................................................................................................TTCTGCCTCGAACACATCGGCGATAGGG.................................................. 28 0 4 0.25 1 0 1 0 0 0 0 0 0 0
..............................................................................................AATGTAGCCCGCTTCTGCCTCGAACA................................................................ 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0
.......................................................................AGGTTGTCAACGTTGAACGCAAAAA........................................................................................ 25 0 4 0.25 1 0 1 0 0 0 0 0 0 0
....................................................................................TGAACGCAAAAATGTAGCCCGCTA............................................................................ 24 1 4 0.25 1 1 0 0 0 0 0 0 0 0
........................................................................................CGCAAAAATGTAGCCCGCTTCTGCCTC..................................................................... 27 0 4 0.25 1 0 1 0 0 0 0 0 0 0
............................................................................GTCAACGTTGAACGCAAAA......................................................................................... 19 0 4 0.25 1 0 0 1 0 0 0 0 0 0
......................................................................................................CCGCTTCTGCCTCGAACACATCGGCGA....................................................... 27 0 4 0.25 1 0 0 1 0 0 0 0 0 0
.....................................................................TAAGGTTGTCAACGTTGAACGCAAAA......................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0
...........................................................................TGTCAACGTTGAACGCAAAA......................................................................................... 20 0 4 0.25 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................TCGGCGATTGGGACG............................................... 15 1 4 0.25 1 0 0 0 1 0 0 0 0 0
.................ATTATAACTGACCCATTAACAATGAG............................................................................................................................................. 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0
...........................................................................TGTCAACGTTGAACGCAAAAATGT..................................................................................... 24 0 4 0.25 1 0 1 0 0 0 0 0 0 0
....................................................................................TGAACGCAAAAATGTAGCCCGCT............................................................................. 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0
....................ATAAATGATCCATTAATAATGA.............................................................................................................................................. 22 3 20 0.25 5 0 0 0 0 0 0 0 0 5
..............................................................................................AATGTAGCCCGCTTCTGCCTCGAACAC............................................................... 27 0 4 0.25 1 0 1 0 0 0 0 0 0 0
...........................................................................TGTCAACGTTGAACGCAAAAATGTAGCC................................................................................. 28 0 4 0.25 1 0 1 0 0 0 0 0 0 0
..TCGTTGGCGTAGTTTATTATAACTGA............................................................................................................................................................ 26 0 4 0.25 1 0 0 0 0 1 0 0 0 0
...........................................................................TGTCAACGTTGAACGCAAAAATGTAGCCCG............................................................................... 30 0 4 0.25 1 0 0 0 1 0 0 0 0 0
........................................................................................................GCTTCTGCCTCGAACACATCGGC......................................................... 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0
....................................................................................TGAACGCAAAAATGTA.................................................................................... 16 0 4 0.25 1 0 0 0 0 1 0 0 0 0
..........................................................................................................TTCTGCCTCGAACACATCGGC......................................................... 21 0 4 0.25 1 0 0 0 1 0 0 0 0 0
...............................................................................................ATGTAGCCCGCTTCTGCCTCGAACACA.............................................................. 27 0 4 0.25 1 1 0 0 0 0 0 0 0 0
..............TTTATTATAACTGACCCATTAACAATG............................................................................................................................................... 27 0 4 0.25 1 0 1 0 0 0 0 0 0 0
.............................................................................................................TGCCTCGAACACATCGGC......................................................... 18 0 4 0.25 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................TCGATTGGGACGGTCTC.......................................... 17 2 5 0.20 1 0 1 0 0 0 0 0 0 0
.....................................................TTTGTCAAGGAGTTTAAAA................................................................................................................ 19 2 5 0.20 1 0 0 0 1 0 0 0 0 0
..............................................................................................................................CGATTGGGACGGTCTCG......................................... 17 2 7 0.14 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................ATCGGCGATTGGGAC................................................ 15 1 7 0.14 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................TCGATTGGGACGGTCT........................................... 16 2 20 0.10 2 0 2 0 0 0 0 0 0 0
...........................................................................................................................GGTCGATTGGGACGGTCTC.......................................... 19 3 14 0.07 1 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

GCACACCTTCTAAACGACGAAAATGGTTCTTGCAATGTACGAGAGACCGTCCCTATCGCCGATGTGTTCGAGGCAGAAGCGGGCTACATTTTTGCGTTCAACGTTGACAACCTTATAATCTCCTTGACAAACGGCACTGACCTCATTGTTAATGGGTCAGTTATAATAAACTACGCCAACGAAA
************************************..((((.(((.....))).))))......((((((((.(((....(((((((...(((....)))...)).)))))......))))))...))))).*************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
Ovary		 SRR553486
Ovary		 SRR618934
Ovary		 SRR553487
Ovary		 SRR553485
Ovary		 M025
embryo
 M053
Female-body
..............................TGCAATGTACGAGAGACCGTCCCTA................................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0 0 0
...................................TGTACGAGAGACCGTCCCTATCGCCGA.......................................................................................................................... 27 0 1 2.00 2 0 1 0 0 1 0 0
....................AAATGGTTCTTGCAATGTACGAGA............................................................................................................................................ 24 0 2 1.50 3 1 2 0 0 0 0 0
................................................................................................TTCAACGTTGACAACCTTATAATCTCCT............................................................ 28 0 1 1.00 1 0 0 1 0 0 0 0
.................................AATGTACGAGAGACCGTCCCTATCGC............................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0
.....................................TACGAGAGACCGTCCCTATCG.............................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0
.........................................................................................................GACAACCTTATAATCTCCTTGACAAACGG.................................................. 29 0 1 1.00 1 0 1 0 0 0 0 0
.................................................................................................................................AACGGCACTGACCTCATTGTTAATGGG............................ 27 0 3 1.00 3 2 0 0 0 1 0 0
.................CGAAAATGGTTCTTGCAATGTACGAGA............................................................................................................................................ 27 0 2 1.00 2 1 0 0 0 1 0 0
..............................................CCGTCCCTATCGCCGATGTGTTCGAGG............................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0
.....................................TACGAGAGACCGTCCCTATC............................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0
...........................TCTTGCAATGTACGAGAGACCGTCCC................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0
...........................TCTTGCAATGTACGAGAGACCGTCGCTA................................................................................................................................. 28 1 1 1.00 1 0 0 0 0 1 0 0
........................................................................................................TGACAACCTTATAATCTCCTTGAC........................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................TATAATCTCCTTGACAAACGGCACTGACC.......................................... 29 0 1 1.00 1 0 1 0 0 0 0 0
...........................TCTTGCAATGTACGAGAGACCGTCCCTA................................................................................................................................. 28 0 1 1.00 1 0 0 0 0 1 0 0
...................................................................................................................TAATCTCCTTGACAAACGGCACTG............................................. 24 0 1 1.00 1 0 0 0 0 0 1 0
........................................................................................................TGACAACCTTATAATCTCCTTGACAAAC.................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0
.............................TTGCAATGTACGAGAGACCGTCCCTATA............................................................................................................................... 28 1 1 1.00 1 0 0 0 1 0 0 0
...........................TCTTGCAATGTACGAGAGACCGTCC.................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0
.......................................CGAGAGACCGTCCCTATCGCCGATG........................................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0
.................................................................................................TCAACGTTGACAACCTTATA................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0
.............................TTGCAATGTACGAGAGACCGTCCCTA................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0
.....................................TACGAGAGACCGTCCCTATCGCCGATGTGT..................................................................................................................... 30 0 1 1.00 1 0 1 0 0 0 0 0
.............................TTGCAATGTACGAGAGACCGTCCC................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0
..............................TGCAATGTACGAGAGACCGTCCCTAT................................................................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0
..........................TTCTTGCAATGTACGAGAGACCGTCCCTA................................................................................................................................. 29 0 1 1.00 1 0 0 0 0 0 0 1
...............................................CGTCCCTATCGCCGATGTGTTCAAGGCAGA........................................................................................................... 30 1 1 1.00 1 0 1 0 0 0 0 0
..........................TTCTTGCAATGTACGAGAGACCGTCCCT.................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0
...........................TCTTGCAATGTACGAGAGACCGTCCCT.................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0
..............................TGCAATGTACGAGAGACCGTCCCT.................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0
.........................GTTCTTGCAATGTACGAGAGACCGTCCC................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................AATCTCCTTGACAAACGGCACTGACC.......................................... 26 0 3 0.67 2 0 0 0 2 0 0 0
....................AAATGGTTCTTGCAATGTACGAGAGAC......................................................................................................................................... 27 0 2 0.50 1 0 0 1 0 0 0 0
.....................................................TATCGCCGATGTGTTCGAGGCAGAAGC........................................................................................................ 27 0 4 0.50 2 0 0 2 0 0 0 0
....................AAATGGTTCTTGCAATGTACGAGAGGC......................................................................................................................................... 27 1 2 0.50 1 0 0 1 0 0 0 0
.....................AATGGTTCTTGCAATGTACGAGAGAC......................................................................................................................................... 26 0 2 0.50 1 0 0 0 0 1 0 0
....................AAATGGTTCTTGCAATGTACGAGAGA.......................................................................................................................................... 26 0 2 0.50 1 0 0 0 1 0 0 0
.....................AATGGTTCTTGCAATGTACGAGA............................................................................................................................................ 23 0 2 0.50 1 0 0 1 0 0 0 0
..............................TGCAATGTACGGGAGACCGTCCC................................................................................................................................... 23 1 2 0.50 1 1 0 0 0 0 0 0
..............................................................................................................................................TCATTGTTAATGGGTCAGTTATAATA................ 26 0 4 0.50 2 0 0 0 1 1 0 0
....................AGATGGTTCTTGCAATGTACGAGAGGC......................................................................................................................................... 27 2 2 0.50 1 0 0 1 0 0 0 0
.....................AATGGTTCTTGCAATGTACGAGAGA.......................................................................................................................................... 25 0 2 0.50 1 0 0 0 1 0 0 0
.......TTCTAAACGACGAAAATGGTTCTTGC....................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0
...................AAAATGGTTCTTGCAATGTACGAGA............................................................................................................................................ 25 0 2 0.50 1 0 0 0 0 1 0 0
.......................................................................................................................................ACTGACCTCATTGTTAATGGG............................ 21 0 3 0.33 1 0 0 0 1 0 0 0
...................................................................................................................................CTTCACTGACCTCATTGTTAATGGG............................ 25 2 3 0.33 1 0 1 0 0 0 0 0
.................................................................................................................................AACGGCACTGACCTCATTGTTAATGGGT........................... 28 0 3 0.33 1 0 1 0 0 0 0 0
........................................................CGCCGATGTGTTCGAGGCAGAAGCGG...................................................................................................... 26 0 4 0.25 1 0 0 1 0 0 0 0
.....................................................................................................................................................TAATGGGTCAGTTATAATAAACTACGC........ 27 0 4 0.25 1 0 0 1 0 0 0 0
.................................................................................................TCAACGTTGACAACCTT...................................................................... 17 0 4 0.25 1 0 0 1 0 0 0 0
..............................................................TGTGTTCGAGGCAGAAGCGGGCTACA................................................................................................ 26 0 4 0.25 1 0 0 1 0 0 0 0
..............................................................TGTGTTCGAGGCAGAAGC........................................................................................................ 18 0 4 0.25 1 0 0 1 0 0 0 0
.........................................................GCCGATGTGTTCGAGG............................................................................................................... 16 0 4 0.25 1 0 0 1 0 0 0 0
............................................................................................................................................................TCAGTTATAATAAACTACGCCAACGA.. 26 0 4 0.25 1 0 1 0 0 0 0 0
.........................................................GCCGATGTGTTCGAGGCAGAAGCGGG..................................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0 0
.................................................................................................................................................TTGTTAATGGGTCAGTTATAATAAACTA........... 28 0 4 0.25 1 0 0 1 0 0 0 0
...................................................CCTATCGCCGATGTGTTCGAGGC.............................................................................................................. 23 0 4 0.25 1 0 0 1 0 0 0 0
.....................................................................................ACATTTTTGCGTTCAACGTT............................................................................... 20 0 4 0.25 1 0 0 1 0 0 0 0
........................................................CGCCGATGTGTTCGAGGCAGAAGCGGG..................................................................................................... 27 0 4 0.25 1 0 0 0 1 0 0 0
.............................................ACTGTCCCTATCGGGGATGT....................................................................................................................... 20 3 5 0.20 1 0 0 1 0 0 0 0
........................................AAGAGCCCGTCCCTAT................................................................................................................................ 16 2 20 0.05 1 0 0 1 0 0 0 0
.......................................AGTGAGACTGTCCCTATC............................................................................................................................... 18 3 20 0.05 1 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 chrU_M_3090:3574-3757 + dsi_221 TTTCGTTGGCGTAGTTTATTATAACTGACCCATTAACAATGAGGTCAGTGCCGTTTGTCAAGGAGATTATAAGGTTGTCAACGTTGAACGCAAAAATGTAGCCCGCTTCTGCCTCGAACACATCGGCGATAGGGACGGTCTCTCGTACATTGCAAGAACCATTTTCGTCGTTTAGAAGGTGTGC
droSec2 scaffold_10535:487-670 + TTTCGTTAATGTATCTGATGATGGCTGACCCCATTATTGAGAGCTCAGAGCCGTTTTTTAGGGATACCTTCAGTTTGTTCACGTTGAACGCGAAGATGTAACCTCTCTCTGCCTCGAACACGTCGGTGATGGGGCCGGTTTCCCGTACATTGCAGGAACTGTTTTCTCCGTTCAAAAGGTGTTC
dm3 chr2L:8723948-8724131 + TTTCGTTAATGTATCTGATGATGGCTGACCCCATTATTGAGAGCTCGGAGCCGTTTGTTAGGGATACCTTCAGTTTGTTCACGTTGAATGCGAAGATGTAACCTCTCTCTGCCTCGAACACGTCGGTGATGGGGCCGGTTTCCCGTACATCGCAGGAACTGTTTTCTCCGTTCAAAAGGTGTTC
droEre2 scaffold_4827:3978-4161 - TTTCGTTAAAGTATCTGATTATGGTTAACCCCATTATTGAGAACTCAGAGCCGTTTGTTAGAGATATTTCCAGCTTGTTTACATTGAACGCGAATATGTAACCTCTCTCTGCCTCGAACACGTCGATGATGGGGCCGGTTTCCCGTACATTGCAGGAACTGTTTTCTCCGTTCAAAAGGTGTTC
droYak3 v2_chrUn_001:397926-398109 + TTTCATTTGTATATCTGATGATGGCTGACCCCGTTATGGACAGCTCAGAGCCATTAGTTAGTGATATTTTCATGTTGTTTACATTGAACACGAAGATGTAACCTCTCTCTGCTTCGAAGATATCGGTTACAGGGCCGGTTTCTCGCACATTGCAGGAACTGTTTTCGCCGTTTAAAAGATTTGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
TTTCGTTGGCGTAGTTTATTATAACTGACCCATTAACAATGAGGTCAGTGCCGTTTGTCAAGGAGATTATAAGGTTGTCAACGTTGAACGCAAAAATGTAGCCCGCTTCTGCCTCGAACACATCGGCGATAGGGACGGTCTCTCGTACATTGCAAGAACCATTTTCGTCGTTTAGAAGGTGTGCSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
..................................................................TTATAAGGTTGTCAACGTTGAACGCAAA..........................................................................................28198.0098000000012565250
.............................................................................................................TGCCTCGAACACATCGGCGATAGGGA.................................................26168.0068000000016334141
.................................................................................................................................................TACATTGCAAGAACCATTTTCGTCGTT............27250.5010100020003160260
..................................................................TTATAAGGTTGTCAACGTTGAACGCAAAAA........................................................................................30126.00260000000717200
...................................................................TATAAGGTTGTCAACGTTGAACGCAAA..........................................................................................27122.00220000000116230
..................................................................TTATAAGGTTGTCAACGTTGAACGCAA...........................................................................................27118.00180000000212040
..................................................................TTATAAGGTTGTCAACGTTGAACGCAAAA.........................................................................................29118.00180000000114120
...................................................................TATAAGGTTGTCAACGTTGAACGCAAAAA........................................................................................29115.0015000000049110
...........................................................................................................TCTGCCTCGAACACATCGGCGATAGGGA.................................................28112.0012000000025050
................................................TGCCGTTTGTCAAGGAGATTATAAGG..............................................................................................................26112.0012000000046020
................................................TGCCGTTTGTCAAGGAGATTATAAGGT.............................................................................................................27110.0010000000005320
......................................................................................................................................................TGCAAGAACCATTTTCGTCGTTTAGA........2625.0010000000013060
......................................................................................................................................................TGCAAGAACCATTTTCGTCGTTTAGAAGG.....2925.0010000000027100
..................................................CCGTTTGTCAAGGAGATT....................................................................................................................1845.00200000812000000
..................................................................TTATAAGGTTGTCAACGTTGAACGC.............................................................................................2514.004000000011110
..........................................................................................................TTCTGCCTCGAACACATCGGCGATAGGGA.................................................2914.004000000012100
.....................................................TTTGTCAAGGAGATTATAAGGTTGTC.........................................................................................................2614.004000000003010
.....................................................................................................................................................TTGCAAGAACCATTTTCGTCGTT............2323.507000000033010
...................................................................TATAAGGTTGTCAACGTTGAACGCAA...........................................................................................2613.003000000012000
............................................TCAGTGCCGTTTGTCAAGGAGATTATA.................................................................................................................2713.003000000001020
..........................................................................................................................TCGGCGATAGGGACGGTCTCTCGTACAT..................................2813.003000000003000
.....................................................................TAAGGTTGTCAACGTTGAACGCAAA..........................................................................................2543.0012000000037020
..............................................................................................................................................TCGTACATTGCAAGAACCATTTTCGTCGTT............3023.006000000015000
..................................................................TTATAAGGTTGTCAACGTTGAACGCA............................................................................................2613.003000000001020
......................................................................................................................................................TGCAAGAACCATTTTCGTCGTT............2222.505000000023000
.................................................................................................................................................TACATTGCAAGAACCATTTTCGTCGT.............2622.505000000022100
................TATTATAACTGACCCATTAACAATGAG.............................................................................................................................................2742.259000000026010
.......................................................TGTCAAGGAGATTATAAGGTTGTCAAC......................................................................................................2712.002000000001100
..................................................................TTATAAGGTTGTCAACGTTGAAC...............................................................................................2312.002000000001010
...................................................................................................................................................CATTGCAAGAACCATTTTCGTCGTT............2522.004000000004000
...................................................................TATAAGGTTGTCAACGTTGAACGCA............................................................................................2512.002000000001100
....................................................................ATAAGGTTGTCAACGTTGAACGCAAA..........................................................................................2612.002000000001010
..................................................CCGTTTGTCAAGGAGATTA...................................................................................................................1912.002000020000000
...................................................CGTTTGTCAAGGAGATTATAAGGT.............................................................................................................2412.002000000002000
..................................................CCGTTTGTCAAGGAGATTATAAGG..............................................................................................................2412.002000000000020
............................................TCAGTGCCGTTTGTCAAGGAGATTA...................................................................................................................2512.002000000000110
..........................................................................................................TTCTGCCTCGAACACATCGGCGATAGG...................................................2741.757000000100150
................TATTATAACTGACCCATTAACAATGA..............................................................................................................................................2641.506000000002040
.....................................................................................................................................................TTGCAAGAACCATTTTCGTCGTTTAGA........2721.503000000002010
......................................................................................................................................................TGCAAGAACCATTTTCGTCGTTTAGAA.......2721.503000200000010
.......................................................TGTCAAGGAGATTATAAGGTTGTC.........................................................................................................2411.001000000001000
................................................................................................TGTAGCCCGCTTCTGCCTCGAACACATC............................................................2841.004000000011020
.................................................................................................................TCGAACACATCGGCGATAGGGACGGT.............................................2611.001000000001000
..........................................................................................................................................................AGAACCATTTTCGTCGTTTAGAAGG.....2521.002000000000020
..............................................................................................................................................TCGTACATTGCAAGAACCATTTTCGTC...............2721.002000000000020
.....................................................................TAAGGTTGTCAACGTTGAACGCAAAAA........................................................................................2741.004000000002011
..................................................................TTATAAGGTTGTCAACGTTGAA................................................................................................2211.001000000000010
.................................................................................................................TCGAACACATCGGCGATAGGGA.................................................2211.001000000001000
....................................................................................................................AACACATCGGCGATAGGGACGGTCTCTCG.......................................2911.001000000001000
.......................................................................................................................ACATCGGCGATAGGGACGGTCTCTCG.......................................2611.001000000001000
.................................................................................................................TCGAACACATCGGCGATAGGGACG...............................................2411.001000000000010
..................................................................................................................CGAACACATCGGCGATAGGGA.................................................2111.001000000001000
..................................................CCGTTTGTCAAGGAGATTATAAGGT.............................................................................................................2511.001000000001000
...................................................................................................................GAACACATCGGCGATAGGGACGGTCTC..........................................2711.001000000001000
..............................................AGTGCCGTTTGTCAAGGAGATTATAAGG..............................................................................................................2811.001000000001000
..................................................................................................................................AGGGACGGTCTCTCGTACATTGCAAGA...........................2711.001000000000010
.....................................................TTTGTCAAGGAGATTATAAGGTTGT..........................................................................................................2511.001000100000000
...................................................CGTTTGTCAAGGAGATTATAAGGTT............................................................................................................2511.001000000010000
.........................................................................................................................................................AAGAACCATTTTCGTCGTTTAGAAGG.....2621.002000000002000
.................................................GCCGTTTGTCAAGGAGATTATAAGGT.............................................................................................................2611.001000000001000
.................................................................ATTATAAGGTTGTCAACGTTGAACGCAA...........................................................................................2811.001000000001000
.................................................................ATTATAAGGTTGTCAACGTTGAACGCA............................................................................................2711.001000000001000
..................................................................................................................................AGGGACGGTCTCTCGTACATTGCAAGAACC........................3011.001000000010000
.............................................CAGTGCCGTTTGTCAAGGAGATTATA.................................................................................................................2611.001000000000001
...............................................................AGATTATAAGGTTGTCAACGTTGAACGC.............................................................................................2811.001000000001000
..........................................................................................................................TCGGCGATAGGGACGGTCTCTCGTA.....................................2511.001000000001000
........................................................................................................................CATCGGCGATAGGGACGGTCTCTC........................................2411.001000000000100
.........................................................TCAAGGAGATTATAAGGTTGT..........................................................................................................2111.001000000000001
.............................................................................................................TGCCTCGAACACATCGGCGATAGGGACGGT.............................................3011.001000000001000
..........................................................................................................................................................AGAACCATTTTCGTCGTT............1821.002000000000002
...................................................CGTTTGTCAAGGAGATTATA.................................................................................................................2011.001000000010000
..................................................................TTATAAGGTTGTCAACGTTGAACG..............................................................................................2411.001000000001000
.....................................AATGAGGTCAGTGCCGTTTGTCAAGGAGA......................................................................................................................2931.003000000012000
.............................................................................................................TGCCTCGAACACATCGGCGATAGG...................................................2441.004000000011200
...............................................................................................................................................CGTACATTGCAAGAACCATTTTCGTCGTT............2921.002000000002000
....................................................................ATAAGGTTGTCAACGTTGAACGCAAAAA........................................................................................2811.001000000001000
.................................................................................................................................................................TTTTCGTCGTTTAGAAGGTGTGC2330.672000000020000
.......................................TGAGGTCAGTGCCGTTTGTCAAGGAGA......................................................................................................................2730.672000000000101
.................................................................................................................................................TACATTGCAAGAACCATTTTCGTCGTTT...........2820.501000000001000
...............TTATTATAACTGACCCATTAACAATGA..............................................................................................................................................2740.502000000001010
...........................................................................TGTCAACGTTGAACGCAAAAATGTAGC..................................................................................2740.502000000001010
............................................................................................................................................TCTCGTACATTGCAAGAACCATTTTCGTCGTT............3220.501000000010000
..............................................................................................................................................TCGTACATTGCAAGAACCATTTTCGTCG..............2820.501000000001000
............................................................................................................................................TCTCGTACATTGCAAGAACCATTTTC..................2620.501000000000010
....................................................................................................................................................ATTGCAAGAACCATTTTCGTCGTTTAGA........2820.501000000010000
................................................................................................................................................GTACATTGCAAGAACCATTTTCGTCGTT............2820.501000000001000
...................................................................................................................................................CATTGCAAGAACCATTTTCGTC...............2220.501000000010000
............................................................................................................................................TCTCGTACATTGCAAGAACCATTT....................2420.501000000000100
..............................................................................................................................................TCGTACATTGCAAGAACCATTTTCGTCGT.............2920.501000000010000
......................................................................................................................................................TGCAAGAACCATTTTCGTCGTTT...........2320.501000000001000
........................................................................................................................................................CAAGAACCATTTTCGTCGTTTAGAAGG.....2720.501000000000010
.................................................................................................................................................TACATTGCAAGAACCATTTTCGTC...............2420.501000000001000
.....................................................................TAAGGTTGTCAACGTTGA.................................................................................................1840.502000000000200
......................................................................................................................................................TGCAAGAACCATTTTCGTCGTTTAG.........2520.501000000000100
.......................................TGAGGTCAGTGCCGTTTGTCAAGGAG.......................................................................................................................2630.331000000000100
.................................TAACAATGAGGTCAGTGCCGTTTGT..............................................................................................................................2530.331000000000010
...............................................................................................................................................................CATTTTCGTCGTTTAGAAGGTGTGC2530.331000000010000
.........................................AGGTCAGTGCCGTTTGTCAAGGAGA......................................................................................................................2530.331000000000010
..................................................................................................................................................................TTTCGTCGTTTAGAAGGTGTG.2130.331000000000001
..............................................................................................................................................................CCATTTTCGTCGTTTAGAAGGTGTGC2630.331000000001000
.............................................................................................................................................................ACCATTTTCGTCGTTTAGAAGGTGTG.2630.331000000001000
..................................AACAATGAGGTCAGTGCCGTTTGTCAA...........................................................................................................................2730.331000000000010
...........................................GTCAGTGCCGTTTGTCAAGGAGA......................................................................................................................2330.331000000001000
.....................................AATGAGGTCAGTGCCGTTTGTCAA...........................................................................................................................2430.331000000010000
...................................................................................TTGAACGCAAAAATGTAGCCC................................................................................2140.251000000100000
...............TTATTATAACTGACCCATTAACAATG...............................................................................................................................................2640.251000000001000
.TTCGTTGGCGTAGTTTATTATAACTGA............................................................................................................................................................2740.251000000000100
................................................TGCCGTTTGTCAAGGAGA......................................................................................................................1840.251000000010000
....................................................................................TGAACGCAAAAATGTAGCCCGCTTC...........................................................................2540.251000000000010
................TATTATAACTGACCCATTAACAATGAGG............................................................................................................................................2840.251000000000100
...........................................................................TGTCAACGTTGAACGCAAAAATGTAG...................................................................................2640.251000000000010
................................................TGCCGTTTGTCAAGGAGATT....................................................................................................................2040.251000000000010
..TCGTTGGCGTAGTTTATTATAACTGACC..........................................................................................................................................................2840.251000000100000
......................................................................AAGGTTGTCAACGTTGAACGCAAAAA........................................................................................2640.251000000000010
................................................................................................TGTAGCCCGCTTCTGCCTCGAACACAT.............................................................2740.251000000001000
.......................................................................................................CGCTTCTGCCTCGAACACATCGGCGA.......................................................2640.251000000000010
......TGGCGTAGTTTATTATAACT..............................................................................................................................................................2040.251000000000100
.....................................................................................................CCCGCTTCTGCCTCGAACACATCGGCGA.......................................................2840.251000000000010
TTTCGTTGGCGTAGTTTATTATAA................................................................................................................................................................2440.251000000000010
..........................................................................TTGTCAACGTTGAACGCAAAAATGT.....................................................................................2540.251000000000010
..TCGTTGGCGTAGTTTATTATAA................................................................................................................................................................2240.251000000001000
..........................................................................................................TTCTGCCTCGAACACATCGGCGATAGGG..................................................2840.251000000000010
..............................................................................................AATGTAGCCCGCTTCTGCCTCGAACA................................................................2640.251000000001000
.......................................................................AGGTTGTCAACGTTGAACGCAAAAA........................................................................................2540.251000000000010
........................................................................................CGCAAAAATGTAGCCCGCTTCTGCCTC.....................................................................2740.251000000000010
............................................................................GTCAACGTTGAACGCAAAA.........................................................................................1940.251000000010000
......................................................................................................CCGCTTCTGCCTCGAACACATCGGCGA.......................................................2740.251000000010000
.....................................................................TAAGGTTGTCAACGTTGAACGCAAAA.........................................................................................2640.251000000001000
...........................................................................TGTCAACGTTGAACGCAAAA.........................................................................................2040.251000000010000
.................ATTATAACTGACCCATTAACAATGAG.............................................................................................................................................2640.251000000001000
...........................................................................TGTCAACGTTGAACGCAAAAATGT.....................................................................................2440.251000000000010
....................................................................................TGAACGCAAAAATGTAGCCCGCT.............................................................................2340.251000000001000
..............................................................................................AATGTAGCCCGCTTCTGCCTCGAACAC...............................................................2740.251000000000010
...........................................................................TGTCAACGTTGAACGCAAAAATGTAGCC.................................................................................2840.251000000000010
..TCGTTGGCGTAGTTTATTATAACTGA............................................................................................................................................................2640.251000000000001
...........................................................................TGTCAACGTTGAACGCAAAAATGTAGCCCG...............................................................................3040.251000000000100
........................................................................................................GCTTCTGCCTCGAACACATCGGC.........................................................2340.251000000001000
....................................................................................TGAACGCAAAAATGTA....................................................................................1640.251000000000001
..........................................................................................................TTCTGCCTCGAACACATCGGC.........................................................2140.251000000000100
...............................................................................................ATGTAGCCCGCTTCTGCCTCGAACACA..............................................................2740.251000000001000
..............TTTATTATAACTGACCCATTAACAATG...............................................................................................................................................2740.251000000000010
.............................................................................................................TGCCTCGAACACATCGGC.........................................................1840.251000000000010
droSec2
TTTCGTTAATGTATCTGATGATGGCTGACCCCATTATTGAGAGCTCAGAGCCGTTTTTTAGGGATACCTTCAGTTTGTTCACGTTGAACGCGAAGATGTAACCTCTCTCTGCCTCGAACACGTCGGTGATGGGGCCGGTTTCCCGTACATTGCAGGAACTGTTTTCTCCGTTCAAAAGGTGTTCSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
................................................................TACCTTCAGTTTGTTCACGTTGAACGC.............................................................................................2765.833508027
.........................TGACCCCATTATTGAGAGCTCAGAGC.....................................................................................................................................2695.004507038
................................................................TACCTTCAGTTTGTTCACGTTGA.................................................................................................23134.7762047411
...............................................................................................................................................................TGTTTTCTCCGTTCAAAAGGTGTT.2474.7133119013
................................................................TACCTTCAGTTTGTTCACGTTGAA................................................................................................24113.7341013127
...............................................................................................................................................................TGTTTTCTCCGTTCAAAAGGTGTTC2573.002105016
................................................................................................TGTAACCTCTCTCTGCCTCGAACACGTC............................................................2882.001601213
.........................TGACCCCATTATTGAGAGCTCAGA.......................................................................................................................................24112.002203019
...............................................................................................................................................................TGTTTTCTCCGTTCAAAAGGTGT..2371.861301003
................................................................TACCTTCAGTTTGTTCACGTTGAACG..............................................................................................2671.1480008
.....................TGGCTGACCCCATTATTGAGAGCTCAG........................................................................................................................................27111.091201200
................................................................TACCTTCAGTTTGTTCACGTTG..................................................................................................22131.081404010
................................................................................................TGTAACCTCTCTCTGCCTCGAACACG..............................................................2690.8980107
................................................................TACCTTCAGTTTGTTCACGTTGAACGCGA...........................................................................................2960.8350005
................................................................................................TGTAACCTCTCTCTGCCTCGAACACGT.............................................................2790.6760204
.............................................................................................AGATGTAACCTCTCTCTGCCTCGAACA................................................................2790.6760006
................................................................................................................................................................GTTTTCTCCGTTCAAAAGGTGTT.2370.5740004
..............................................................................................GATGTAACCTCTCTCTGCCTCGAACA................................................................2690.5650005
................................................................TACCTTCAGTTTGTTCACGTTGAAC...............................................................................................2580.5040103
.................................................................ACCTTCAGTTTGTTCACGTTGAACGC.............................................................................................2660.5030003
.....................TGGCTGACCCCATTATTGAGAGCTC..........................................................................................................................................25120.5060105
.................................................................ACCTTCAGTTTGTTCACGTTGAA................................................................................................23110.4550005
..........................GACCCCATTATTGAGAGCTCAGAGC.....................................................................................................................................2590.4440004
...........................................................................................GAAGATGTAACCTCTCTCTGCCTCGAA..................................................................2790.4440004
.......................................................................................................TCTCTCTGCCTCGAACACGTCGGTGA.......................................................26100.4040202
............................CCCCATTATTGAGAGCTCAGAGCCGTT.................................................................................................................................2780.3830003
..................................................................................................TAACCTCTCTCTGCCTCGAACACGTC............................................................2680.3830102
..............................................................................................GATGTAACCTCTCTCTGCCTCGAACAC...............................................................2790.3330003
.............................................................................................AGATGTAACCTCTCTCTGCCTCGAA..................................................................2590.3330003
..................................................................CCTTCAGTTTGTTCACGTTGAACGC.............................................................................................2560.3320002
...................................................................................................AACCTCTCTCTGCCTCGAACACGTC............................................................2590.3330102
..............................................................................................GATGTAACCTCTCTCTGCCTCGAA..................................................................2490.3330003
.........................TGACCCCATTATTGAGAGCTCAGAGCC....................................................................................................................................2790.3330102
.TTCGTTAATGTATCTGATGATGGC...............................................................................................................................................................24120.3340211
................................................................TACCTTCAGTTTGTTCACGTT...................................................................................................21130.3140301
...........................................................................................................TCTGCCTCGAACACGTCGGTGATGGG...................................................26110.2730300
.................................................................................................GTAACCTCTCTCTGCCTCGAACACGTC............................................................2780.2520002
.........................TGACCCCATTATTGAGAGCTCAGAG......................................................................................................................................2590.2220002
..................................................................................................TAACCTCTCTCTGCCTCGAACACGT.............................................................2590.2220002
.........................TGACCCCATTATTGAGAGCTCAGAGCCG...................................................................................................................................2890.2220002
.............................................................................................AGATGTAACCTCTCTCTGCCTCGAAC.................................................................2690.2220002
................................................................................................TGTAACCTCTCTCTGCCTCGAACAC...............................................................2590.2220002
..............................................................................................GATGTAACCTCTCTCTGCCTCGA...................................................................2390.2220002
............................................................................................................CTGCCTCGAACACGTCGGTGATGG....................................................24110.1820002
.........................................................................................................TCTCTGCCTCGAACACGTCGGTGAT......................................................25110.1820002
.........................................................................................................TCTCTGCCTCGAACACGTCGGTGA.......................................................24110.1820002
...........................................................................................................TCTGCCTCGAACACGTCGGTGATGGGG..................................................27110.1820002
.................................................................................................................................................TACATTGCAGGAACTGTTTTCTCCGTT............2760.1710100
............................................................................................................................................TCCCGTACATTGCAGGAACTGTTTTC..................2660.1710001
..................................................................................................................................................ACATTGCAGGAACTGTTTTCTCCGTT............2660.1710001
................................................................TACCTTCAGTTTGTTCACGTTGAACGCG............................................................................................2860.1710001
.................................................................................................................................................TACATTGCAGGAACTGTTTT...................2060.1710100
................................................................................................................CTCGAACACGTCGGTGATGGGGCCGGT.............................................27130.1520002
TTTCGTTAATGTATCTGATGA...................................................................................................................................................................21130.1520002
................................................................TACCTTCAGTTTGTTCACGT....................................................................................................20130.1520200
.................................................................ACCTTCAGTTTGTTCACGTTGA.................................................................................................22130.1520002
.................................................................ACCTTCAGTTTGTTCACGTTGAACG..............................................................................................2570.1410001
................................................................................................................................................................GTTTTCTCCGTTCAAAAGGTGTTC2470.1410001
...............................................................................................................................................................TGTTTTCTCCGTTCAAAAGGT....2170.1410100
..............................................................................................................................................................CTGTTTTCTCCGTTCAAAAGGTGTTC2670.1410001
................................................................................................................................................................GTTTTCTCCGTTCAAAAGGTGT..2270.1410001
....................................................................TTCAGTTTGTTCACGTTGAACG..............................................................................................2280.1310001
..................................TATTGAGAGCTCAGAGCCGTTT................................................................................................................................2280.1310100
.............................CCCATTATTGAGAGCTCAGAGCCGTT.................................................................................................................................2680.1310001
...............................CATTATTGAGAGCTCAGAGCCGTT.................................................................................................................................2480.1310100
.................................TTATTGAGAGCTCAGAGCCGTT.................................................................................................................................2280.1310001
.............................................................................................AGATGTAACCTCTCTCTGCCTCGAACACG..............................................................2990.1110001
..............................................................................................GATGTAACCTCTCTCTGCCTCGAAC.................................................................2590.1110001
...............................................................................................ATGTAACCTCTCTCTGCCTCGAACACGT.............................................................2890.1110100
................................................................................................TGTAACCTCTCTCTGCCTCGAACA................................................................2490.1110001
..............................................................................................GATGTAACCTCTCTCTGCCTCGAACACGT.............................................................2990.1110001
...........................ACCCCATTATTGAGAGCTCAGAGC.....................................................................................................................................2490.1110001
...............................................................................................ATGTAACCTCTCTCTGCCTCGAACA................................................................2590.1110001
...............................................................................................ATGTAACCTCTCTCTGCCTCGAACAC...............................................................2690.1110001
...................................................................................................AACCTCTCTCTGCCTCGAACACGTCGGT.........................................................2890.1110001
..............................................................................................GATGTAACCTCTCTCTGCCTCG....................................................................2290.1110001
............................................................................................AAGATGTAACCTCTCTCTGCCTCGAAC.................................................................2790.1110001
.................................................................................................GTAACCTCTCTCTGCCTCGAACACG..............................................................2590.1110001
..............................................................................................GATGTAACCTCTCTCTGCCTCGAACACG..............................................................2890.1110001
...........................................................................................GAAGATGTAACCTCTCTCTGCCTCGAAC.................................................................2890.1110001
..................................................................................................TAACCTCTCTCTGCCTCGAACACG..............................................................2490.1110001
.................................................................................................................................TGGGGCCGGTTTCCCGTACATTGCA..............................25100.1010001
......................................................................................................CTCTCTCTGCCTCGAACACGTCGGTGA.......................................................27100.1010001
.....................................................................................................CCTCTCTCTGCCTCGAACACGTCGGTGA.......................................................28100.1010010
.........................................................................................................TCTCTGCCTCGAACACGTCGGTGATGG....................................................27110.0910010
...........................................................................................................TCTGCCTCGAACACGTCGGTGATG.....................................................24110.0910001
..........................................................................................................CTCTGCCTCGAACACGTCGGTGAT......................................................24110.0910001
.........................................................................................................TCTCTGCCTCGAACACGTCGG..........................................................21110.0910100
.............................................................................................................TGCCTCGAACACGTCGGTGATGGGG..................................................25110.0910010
.............................................................................................................TGCCTCGAACACGTCGGTGATGGG...................................................24110.0910100
.........................TGACCCCATTATTGAGAGCTCAG........................................................................................................................................23110.0910001
.....................TGGCTGACCCCATTATTGAGAGCTCA.........................................................................................................................................26110.0910100
........................................................................................................CTCTCTGCCTCGAACACGTCGGT.........................................................23110.0910100
.....................................................................TCAGTTTGTTCACGTTGAA................................................................................................19120.0810100
............ATCTGATGATGGCTGACCCCA.......................................................................................................................................................21120.0810001
.....................TGGCTGACCCCATTATTGAGAGC............................................................................................................................................23120.0810100
....................................................................TTCAGTTTGTTCACGTTGAA................................................................................................20120.0810100
..TCGTTAATGTATCTGATGATGGCTGACCC.........................................................................................................................................................29120.0810001
.....TTAATGTATCTGATGATGG................................................................................................................................................................19120.0810100
..................TGATGGCTGACCCCATTATTGAGAGC............................................................................................................................................26120.0810100
........ATGTATCTGATGATGGCTGA............................................................................................................................................................20120.0810100
.....................TGGCTGACCCCATTATTGAGAGCT...........................................................................................................................................24120.0810100
...............................................................................................................CCTCGAACACGTCGGTGATGGG...................................................22130.0810100
................................................................................................................CTCGAACACGTCGGTGATGGG...................................................21130.0810100
.................................................................................................................TCGAACACGTCGGTGATGGGGCCGGT.............................................26130.0810001
................................................................................................................CTCGAACACGTCGGTGATG.....................................................19130.0810010
................................................................................................................CTCGAACACGTCGGTGATGGGGCCG...............................................25130.0810001
.....TTAATGTATCTGATGATG.................................................................................................................................................................18130.0810100
.................................................................................................................TCGAACACGTCGGTGATGGGGCCGGTT............................................27130.0810001
.........................................................................................................................GTCGGTGATGGGGCCGGTTTCCCG.......................................24140.0710001
.....................................................................................................................ACACGTCGGTGATGGGGCCGGT.............................................22140.0710001
......................................................................................................................CACGTCGGTGATGGGGCCGGTTTCCCG.......................................27140.0710001
......................................................................................................................CACGTCGGTGATGGGGCCGGTTTCCC........................................26140.0710001
........................................................................................................................CGTCGGTGATGGGGCCGGTTTCCCGT......................................26140.0710001
....................................................................................................................AACACGTCGGTGATGGGGCCGGT.............................................23140.0710001
droEre2
TTTCGTTAAAGTATCTGATTATGGTTAACCCCATTATTGAGAACTCAGAGCCGTTTGTTAGAGATATTTCCAGCTTGTTTACATTGAACGCGAATATGTAACCTCTCTCTGCCTCGAACACGTCGATGATGGGGCCGGTTTCCCGTACATTGCAGGAACTGTTTTCTCCGTTCAAAAGGTGTTCSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
No Reads
droYak3
TTTCATTTGTATATCTGATGATGGCTGACCCCGTTATGGACAGCTCAGAGCCATTAGTTAGTGATATTTTCATGTTGTTTACATTGAACACGAAGATGTAACCTCTCTCTGCTTCGAAGATATCGGTTACAGGGCCGGTTTCTCGCACATTGCAGGAACTGTTTTCGCCGTTTAAAAGATTTGTSizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
No Reads

Generated: 12/06/2013 at 02:34 PM