ID:

dsi_22

 Coordinate:

X:12918322-12918390 +

 Confidence:

Known Ortholog

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.8 -22.8 -22.6

Flybase annnotation

CDS [Dsim\GD17314-cds]; exon [dsim_GLEANR_17452:1]; intron [Dsim\GD17314-in]; CDS [Dsim\GD17314-cds]; exon [dsim_GLEANR_17452:2]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------################################################
 CGCTGATCATACTGCTGAGCTTCATTTATCCCTGCACGTACATCACCAAGGTAAGTGACTATGCCGGGATTGTGGTTATTATACTTAGCGTCTCCACTCACGGCATTTCATTCACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATC
***********************************...............((((((((..((((((.((..((((..................)))))).)))))).....))))))))..............************************************ 		Read size # Mismatch Hit Count Total Norm Total M023
head
 O002
Head
 O001
Testis
 M053
Female-body		 M024
male body
 M025
embryo
 SRR553486
Ovary		 SRR553485
Ovary		 SRR553487
Ovary		 SRR553488
Ovary		 GSM343915
embryo
 SRR618934
Ovary
...............................................................................................ACTCACGGCATTTCATTCACTTG................................................... 23 0 1 400.00 400 294 8 6 27 39 25 0 1 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACT..................................................... 21 0 1 320.00 320 73 64 20 4 2 3 52 44 30 21 3 4
...............................................................................................ACTCACGGCATTTCATTCACTT.................................................... 22 0 1 297.00 297 79 136 22 17 5 2 9 8 8 4 3 4
...............................................................................................ACTCACGGCATTTCATTCAC...................................................... 20 0 1 163.00 163 10 127 24 0 1 0 0 1 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGC.................................................. 24 0 1 134.00 134 29 78 12 10 5 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCAG................................................ 26 0 1 129.00 129 34 48 13 15 5 9 3 0 0 0 2 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCA................................................. 25 0 1 70.00 70 22 16 5 13 6 3 1 0 1 0 3 0
...............................................................................................ACTCACGGCATTTCATTCA....................................................... 19 0 1 65.00 65 0 55 10 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTC........................................................ 18 0 1 60.00 60 1 49 9 0 0 1 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATTGTGG.............................................................................................. 25 0 1 32.00 32 6 0 0 1 4 18 2 0 0 0 1 0
..................................................GTAAGTGACTATGCCGGGAT................................................................................................... 20 0 1 32.00 32 24 0 0 0 6 1 1 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATT.................................................................................................. 21 0 1 29.00 29 18 0 0 0 7 3 0 1 0 0 0 0
..................................................GTAAGTGACTATGCCGGGA.................................................................................................... 19 0 1 15.00 15 8 1 1 0 1 3 0 0 0 0 1 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCAA................................................ 26 1 1 9.00 9 0 0 0 3 0 0 1 3 0 2 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCAGT............................................... 27 0 1 9.00 9 1 0 0 0 0 2 0 1 0 0 5 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCAGA............................................... 27 1 1 7.00 7 0 0 0 0 0 0 3 1 3 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACC..................................................... 21 1 1 6.00 6 5 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCAGTA.............................................. 28 0 1 6.00 6 0 5 1 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTGG................................................... 23 1 1 6.00 6 4 0 0 0 1 1 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATTGT................................................................................................ 23 0 1 6.00 6 2 0 2 0 1 1 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATTG................................................................................................. 22 0 1 5.00 5 2 0 0 0 0 2 0 0 1 0 0 0
...................................................TAAGTGACTATGCCGGGATTG................................................................................................. 21 0 1 4.00 4 1 0 0 0 0 0 1 0 1 1 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCAAA............................................... 27 2 1 4.00 4 0 0 0 0 0 0 0 2 1 1 0 0
.................................................................................................TCACGGCATTTCATTCACTTGC.................................................. 22 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0
...................................................TAAGTGACTATGCCGGGATTGT................................................................................................ 22 0 1 3.00 3 1 0 0 0 2 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGA.................................................. 24 1 1 3.00 3 0 0 0 0 2 0 1 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATTGTG............................................................................................... 24 0 1 3.00 3 1 0 0 0 0 1 0 0 0 0 1 0
...............................................................................................TCTCACGGCATATCAATCACTTGCA................................................. 25 3 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CTCACGGCATTTCATTCACTTG................................................... 22 0 1 3.00 3 2 0 0 1 0 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATTGTGGTT............................................................................................ 27 0 1 3.00 3 0 0 0 0 2 1 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGT.................................................. 24 1 1 2.00 2 0 0 0 0 1 1 0 0 0 0 0 0
.................................................................................................TCACGGCATTTCATTCACTTGCAG................................................ 24 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GAAACAGCTGAAGGAGGTG......... 19 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATTGTGGT............................................................................................. 26 0 1 2.00 2 0 0 0 0 0 1 0 0 0 0 0 1
CGCTGATCATACTGCTGAGC..................................................................................................................................................... 20 0 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATTGTGT.............................................................................................. 25 1 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0
................................................................................................ATCACGGCATTTCATTCACTT.................................................... 21 1 1 2.00 2 0 0 0 0 0 0 1 0 1 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCGG................................................ 26 1 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................TTATTATACTTAGCGTCTCC.......................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCAC................................................ 26 1 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................CTCACGGCATTTCATTCAC...................................................... 19 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
................................................................................................CTCACGGCATTTCATTCACTTGCAGT............................................... 26 0 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACG..................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGACATTTCATTCACTTG................................................... 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TACGGCATTTCATTCACTTG................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...TGATCATACTGCTGAGCT.................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................ACTTACGGCATTTCATTCACTT.................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................GTGAGTGACTATGCCGGGATTGTGG.............................................................................................. 25 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................AAGTGACTATGCCGGGAT................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................CTCACGGCATTTCATTCACTTGC.................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATTGG................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATTT................................................................................................. 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................CACGGCATTTCATTCACTTGCAG................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....GATCATACTGCTGAGCTT................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................TTATACTTAGCGTCTCCACTCACGGCA................................................................ 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................CTCACGGCATTTCATTCACTTGCAG................................................ 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................CACGGCATTTCATTCACTTGC.................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
...............................................................................................AATCACGGCATTTCATTCACT..................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................GAAACAGCTGAAGGAGGTGATGAA.... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................ACATCACCGCCGAGAAGGA............................ 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCTTTCACTTT................................................... 23 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATTGTGGAA............................................................................................ 27 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCAGG............................................... 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................ACTCATGGCATTTCATTCACTT.................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................CAGCTGAAGGAGCTGATGAGG... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................TATGCCGGGATTGTGGTTATT......................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
...............................................................................................ACTCACGGGATTTCATTCACTTG................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTAA.................................................. 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCG....................................................................................................... 16 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
...TGATCATACTGCTGAGCTTCATTTATC........................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCCCTTGCAGT............................................... 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
.............GCTGAGCTTCATTTATCCC......................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................TAGCGTCTCCACTCACGGCATTTCATT......................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGTCATTTCATTCACTTG................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGG.................................................................................................... 19 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.....ATCATACTGCTGAGCTTCATTTATCCCT........................................................................................................................................ 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................CTCACGGCATTTCATTCACTTGCT................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATG.................................................................................................. 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................ACCACGGCATTTCATTCACT..................................................... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................TCACGGCATTTCATTCACT..................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................CTTAGCGTCTCCACTCACGGC................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGAA................................................................................................... 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................TCACGGCATTTCATTCACTT.................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................TTATTATACTTAGCGTCTCCACT....................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GTACATCACCGCCGAGAAGGAGAAAC....................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
..........................................................................................................................................GTAGAAACAGCTGAAGGAGGT.......... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................TATACTTAGCGTCTCCACTCACGGCG................................................................ 26 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCTTTCACC..................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTGACGGCATTTCATTCACTTG................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ATTCACGGCATTTCATTCACTT.................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
..............................................................................................CACTCACGGCATTTCATTCACT..................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACTGCATTTCATTCACTTG................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TCACGGCATTTCATTCACTTG................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCACTCACTTGCAG................................................ 26 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................GCTCACGGCATTTCATTCACTTGCAG................................................ 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCCG................................................ 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................................................TCACGGCATTTCATTCAC...................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCGCGGCATTTCATTCACTTGCAG................................................ 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
........ATACTGCTGAGCTTCATTTATCCCG........................................................................................................................................ 25 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................ACTCACGGCATATCATTAACTTGCA................................................. 25 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGCATTGTGG.............................................................................................. 25 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................TCACGGCATTTCATTCACTTGCA................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCAGTT.............................................. 28 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................ATTCACGGCATTTCATTCACT..................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTTGCAG................................................ 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................GAAGTGACTATGCCGGGATTGTAA.............................................................................................. 24 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................TCACGGCATTTCATTCACTTGCAGT............................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
..................................................GTAAGTGACTATGCCGGGATTTTGG.............................................................................................. 25 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................TATTATACTTAGCGTCTCCACTCACGGCA................................................................ 29 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................CTATGCCGGGATTGTGGTT............................................................................................ 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATGTCATTCACTTGCAG................................................ 26 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................TTCACGGCATTTCATTCACTTGC.................................................. 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGAATTTCATTCACTTG................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCAGTTCATTCACTT.................................................... 22 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................CTCACGGCATTTCATTCACTTGCA................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................AGTCACGGCATTTCATTCACT..................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
....................................................AAGTGATTATGCCGG...................................................................................................... 15 1 7 0.71 5 0 0 0 0 0 0 0 0 0 5 0 0
....................................................AAGTGATTATGCCGGAAT................................................................................................... 18 2 3 0.67 2 0 0 0 0 0 0 0 0 0 2 0 0
.....................................................AGTGACTACGCCGGG..................................................................................................... 15 1 5 0.60 3 0 0 0 0 0 0 0 3 0 0 0 0
...................................................CAAGTGACTATGCCGG...................................................................................................... 16 1 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................TAAAGAGATACAGCTGAAGGAG............ 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1
..........................................................CTATGCCGGGGTTGTGA.............................................................................................. 17 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................ATTTCATTCACTTGCA................................................. 16 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1
...............................................................................................TCTCACGGCATATCAATCACTT.................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................AGTGATTATGCCGGAAT................................................................................................... 17 2 13 0.31 4 0 0 0 0 0 0 0 0 0 4 0 0
..................................................GCAAGTGATTATGCCGG...................................................................................................... 17 2 16 0.25 4 0 0 0 0 0 0 0 0 0 4 0 0
.................................................TGTAAGTGATTATGCCGG...................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................TTCAGTGGCAGAACATCACC....................................... 20 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CGACTCCACTCACGG.................................................................. 15 1 9 0.11 1 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................CACCGACCAGAAGGAGAAGCA...................... 21 3 13 0.08 1 0 0 0 0 0 0 1 0 0 0 0 0
................................................AGGTAATTGACTATGCA........................................................................................................ 17 2 17 0.06 1 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................TTTCATTCACTTGCAA................................................ 16 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0
...............................................AAGGTAAGTGACTGCGCCA....................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
......................................................................................AGCGTCTCAACACACGGG................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0
....................................................AAGTGATTATGCCGGAATG.................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

##################################################-----------------------------------------------------------------------################################################
 GATCTTCATCACCTCCTTCAGCTGTTTCTCCTTCTCGGCGGTGATGTACTGCAAGTGAATGAAATGCCGTGAGTGGAGACGCTAAGTATAATAACCACAATCCCGGCATAGTCACTTACCTTGGTGATGTACGTGCAGGGATAAATGAAGCTCAGCAGTATGATCAGCG
************************************..............((((((((.....((((((.((((((..................))))..)).))))))..))))))))...............*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Ovary
...................................................................................................ATCCCGGCATAGTCACTTACC................................................. 21 0 1 1.00 1 1
.............................................................................................AACACAATCCCGGCCTCGTCA....................................................... 21 3 3 0.33 1 0
.............................................................................................ACCACAATCCCGGCAG............................................................ 16 1 5 0.20 1 0
............................TCCTTCTCGGAGGTGA............................................................................................................................. 16 1 8 0.13 1 0
..............................................................AACGCCGTGAGTGAAGAAG........................................................................................ 19 3 14 0.07 1 0
.............................................................................................AACACAATCCCGGCATC........................................................... 17 2 17 0.06 1 0
.............................................................................................AACACAATCCCGGCA............................................................. 15 1 19 0.05 1 0
............................................................GCAATGCCGTGAGTGATGA.......................................................................................... 19 3 19 0.05 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 X:12918272-12918440 + dsi_22 CGCTGATCATACTGCTGAGCTTCATTTATCCCTGCACGTACATCACCAAGGTAAGTGA--------CTATGCCG------GGATTG--------TGGTTATTATAC------TT-------AGCGTCTCCACT--CACGGC-ATTTC--ATTC-ACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATC
droSec2 scaffold_8:3476261-3476429 - dse_87 CGCTGATCATACTGCTGAGCTTCATTTATCCCTGCACGTACATCACCAAGGTAAGTGA--------CTATGCCG------GGATTG--------TGGTTATTATAC------TT-------AGAGTCTCCACT--CACGGC-ATTTC--ATTC-ACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATC
dm3 chrX:21169254-21169422 - dme-mir-2535b CGCTGATCATACTGTTGAGCTTCATTTATCCCTGCACGTACATCACTAAGGTAAGTGA--------CTATGCCG------GGATTG--------TGGTTATTGAAC------TT-------AGCGTCTCCACT--CACGGC-ATTTC--ATTC-ACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATC
droEre2 scaffold_4690:17698611-17698779 - der_64 CGCTGATCATACTGTTGAGCTTTATTTATCCCTGCACGTACATCACCAAGGTAAGTGA--------CAGTGCCG------GGATTG--------TGGTTATTAAAA------AT-------ACCTTCTCCACT--CACGGC-ATTTC--ATTC-ACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATC
droYak3 X:20344977-20345145 - CGCTGATCATACTGCTGAGCTTTATTTACCCATGCACGTACATCACCAAGGTAAGTGA--------CAATGCCG------GGATTG--------TGGTTATTGAAA------AT-------ACCTTCTCCACT--CACGGC-ATTAT--ATTC-ACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATC
droEug1 scf7180000408193:312993-313161 + CGCTGATCATACTGTTGAGCTTCATCTATCCATGCACGTATATCACCAAGGTAAGTGG--------CTATGCCG------GGATCG--------TGGTTGATCTAT------GT-------ACCTTCTCCACT--CACGGC-ATTTC--ATTC-ACTTGTAGTACATCACCGCTGAAAAGGAGAAGCAGCTCAAGGAGGTAATGAAGATC
droBia1 scf7180000302187:362196-362366 + CGCTGATCATACTGCTCAGCTTCATCTACCCCTGCACGTACATCACCAAAGTAAGTGG--------CCATGCCG------GGATTG--------TGGTTTAA---C-------CAGA-GGTTCCTCCTCCACT--CACGGC-ATTTC--ATTC-ACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATC
droTak1 scf7180000415158:278047-278218 + CGCTGATCATACTGCTGAGCTTCATCTATCCCTGCACGTACATCACCAAGGTAAGTGG--------CTATGCCG------GGATTG--------TGGTTTACAATA---------GAAAG-ATCCCCTCCACT--CACGGC-ATTTC--ATTC-ACTTGCAGTACATCACCGCCGAGAAGGAGAAGCAGCTGAAGGAGGTGATGAAGATC
droEle1 scf7180000490214:747345-747513 + CGCTAATCATACTGCTGAGCTTCATCTATCCGTGCACGTACATCACCAAGGTAAGTGG--------GTATGCCG------GGACTG--------TGGTTCTAAATG------CC-------ATCACCACCACT--CACGGC-ATTTC--ATTC-ACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATC
droRho1 scf7180000780082:43736-43900 + CGCTGATCATACTGCTGAGCTTCATCTATCCCTGCACGTACATCACCAAGGTAAGTGG--------GTATGCCG------GGATTG--------TGGTTAAT----------AC-------ACCTCCTCCACT--CACGGC-ATTTC--ATTC-ACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATC
droFic1 scf7180000454077:620809-620969 - CGTTGATTATACTGCTCAGCTTCATTTATCCCTGCACGTACATCACCAAGGTAAGTTT--------ATATTTATTT-GTGTTGGT---------------------------GT-------ACCTCCTCCACT--CACAAC-ATTTC--ATTC-ACCTGCAGTTCATTACCGCCGAGAAGGAGAAGCAGCTCAAGGAGGTGATGAAGATC
droKik1 scf7180000302395:540374-540537 - CACTGATCATCTTGCTGAGCTTCATCTATCCGTGCACGTACATCACCAAGGTAAGTCT-------------CCGAGAACGGGAACGAATCGCACAGATCCATATCT------GT-------AT--------------C--T-GTATC--CTTC-TTGTGTAGTACATCACCGCCGAGAAGGAGAAGCAGCTCAAGGAGGTGATGAAGATC
droAna3 scaffold_13334:1052535-1052609 + ATC------------------------------------------------------------------------------------------------------------------------------------CAAGTT-ATTTC--CTTCAATTTTCAGTTCATAACCGCCGAAAAGGAGAAACAGCTCAAGGAAGTGATGAAAATA
droBip1 scf7180000396733:700607-700770 + CGCTGATCATACTGCTCAGTTTCATATATCCCTGCACGTATATAACAAAGGTGAGAGGGACGAGGTCTATA----------------------------GCTTTCGGGTTGTGT-------A------ATACT--TTAAAT-ATTTT--ATTCCAATTTCAGTATATAACCGCCGAAAAGGAAAAACAACTGAAGGAAGTCATGAAGATC
dp5 XL_group1a:9058655-9058823 + dps-mir-2535 CGCTGATTATCCTCCTCAGCTTCATCTATCCGTGCACGTACATCACAAAGGTAAGTGG--------CTATGCCGCG-ACGGGATTG--------A---------AC------CT-CT-CAT-CTCTCACCTCT--CACGGC-ATATC--AATC-ACTTGCAGTACATCACCGCCGAGAAGGAGAAGCAGCTCAAGGAGGTAATGAAGATC
droPer2 scaffold_15:1452109-1452277 + CGCTGATTATCCTCCTCAGCTTCATCTATCCGTGCACGTACATCACAAAGGTAAGTGG--------CTATGCCGCG-ACGGGATTG--------A---------AC------CT-CT-CAT-CTCTCACCTCT--CACGGC-ATATC--AATC-ACTTGCAGTACATCACCGCCGAGAAGGAGAAGCAGCTTAAGGAGGTAATGAAGATC
droWil2 scf2_1100000004515:164746-164809 - -----------------------------------------------------------------------------------------------------------------------------------------------TTTG--TTTT-TCTTACAGTACATTACATCGGAGAAGGAGAAACAACTGAAGGAGGTGATGAAAATA
droVir3 scaffold_12970:7928278-7928357 - C------------------------------------------------------------------------------------------------------------------------------TCTTCT--CACGAC-ATCCCTTAATC-CCTTGCAGTACGTTGCCAACGAAAAGGAATTGCAACTGAAGGAGGTCATGAAAATA
droMoj3 scaffold_6482:1598811-1598875 + ----------------------------------------------------------------------------------------------------------------------------------------------ATTTC--GTCG-CCTTACAGTACATCTCCAAGGAGAAGGAAATGCAGTTGAAGGAAGTGATGAAGATA
droGri2 scaffold_15203:11132581-11132749 + CATTGATAATACTGCTGAGCTTCATCTATCCCTGTACCTACATTACTAAGGTATGTT--------------CGA------TGATTT--------TGGTTTTTTTTGGCT---TT-------ACTTTCACCGTTTACACGACAATTTC--ATCC-TTTTGCAGTACGTGACCAGTGAGAAGGAGAAGCAGCTGAAGGAGGTGATGAAAATA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
CGCTGATCATACTGCTGAGCTTCATTTATCCCTGCACGTACATCACCAAGGTAAGTGA--------CTATGCCG------GGATTG--------TGGTTATTATAC------TT-------AGCGTCTCCACT--CACGGC-ATTTC--ATTC-ACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATCSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-ACTTG...................................................231400.0040002943925682710000
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-ACT.....................................................211320.003203732320644445230214
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-ACTT....................................................221297.0029737952221361789844
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-AC......................................................201163.001630101024127010000
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-ACTTGC..................................................241134.001340295012781000000
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-ACTTGCAG................................................261129.001292345913481503000
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-ACTTGCA.................................................25170.0070322635161301100
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-A.......................................................19165.006500001055000000
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-........................................................18160.00600101949000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGG.................................................................................................................25132.00321641800102000
..................................................GTAAGTGA--------CTATGCCG------GGAT..............................................................................................................................20132.00320246100001000
..................................................GTAAGTGA--------CTATGCCG------GGATT.............................................................................................................................21129.00290187300010000
..................................................GTAAGTGA--------CTATGCCG------GGA...............................................................................................................................19115.0015181311000000
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-ACTTGCAGT...............................................2719.009510200010000
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-ACTTGCAGTA..............................................2816.006000015000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------T...................................................................................................................2316.006021120000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------....................................................................................................................2215.005020200000100
...................................................TAAGTGA--------CTATGCCG------GGATTG--------....................................................................................................................2114.004010000001110
....................................................................................................................................T--CACGGC-ATTTC--ATTC-ACTTGC..................................................2213.003020001000000
...................................................TAAGTGA--------CTATGCCG------GGATTG--------T...................................................................................................................2213.003012000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TG..................................................................................................................2413.003110100000000
...................................................................................................................................CT--CACGGC-ATTTC--ATTC-ACTTG...................................................2213.003020000100000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGGTT...............................................................................................................2713.003002100000000
....................................................................................................................................T--CACGGC-ATTTC--ATTC-ACTTGCAG................................................2412.002000011000000
......................................................................................................................................................................................GAAACAGCTGAAGGAGGTG.........1912.002000200000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGGT................................................................................................................2612.002000100000001
CGCTGATCATACTGCTGAGC..............................................................................................................................................................................................2012.002000100100000
.................................................................................................TTATTATAC------TT-------AGCGTCTCC................................................................................2012.002020000000000
...................................................................................................................................CT--CACGGC-ATTTC--ATTC-AC......................................................1912.002000002000000
...................................................................................................................................CT--CACGGC-ATTTC--ATTC-ACTTGCAGT...............................................2612.002000100100000
...TGATCATACTGCTGAGCT.............................................................................................................................................................................................1811.001000100000000
....................................................AAGTGA--------CTATGCCG------GGAT..............................................................................................................................1811.001001000000000
...................................................................................................................................CT--CACGGC-ATTTC--ATTC-ACTTGC..................................................2311.001000001000000
.......................................................................................................................................CACGGC-ATTTC--ATTC-ACTTGCAG................................................2311.001010000000000
....GATCATACTGCTGAGCTT............................................................................................................................................................................................1811.001000000100000
....................................................................................................TTATAC------TT-------AGCGTCTCCACT--CACGGC-A...................................................................2711.001000000001000
...................................................................................................................................CT--CACGGC-ATTTC--ATTC-ACTTGCAG................................................2511.001000000100000
.......................................................................................................................................CACGGC-ATTTC--ATTC-ACTTGC..................................................2111.001000000000001
......................................................................................................................................................................................GAAACAGCTGAAGGAGGTGATGAA....2411.001000000100000
...................................................................................................................................................................ACATCACCGCCGAGAAGGA............................1911.001000010000000
...................................................................TATGCCG------GGATTG--------TGGTTATT............................................................................................................2111.001100000000000
..................................................GTAAGTGA--------CTATGCCG------..................................................................................................................................1611.001000000000001
...TGATCATACTGCTGAGCTTCATTTATC....................................................................................................................................................................................2711.001000000001000
.............GCTGAGCTTCATTTATCCC..................................................................................................................................................................................1911.001000100000000
.................................................................................................................T-------AGCGTCTCCACT--CACGGC-ATTTC--ATT..........................................................2711.001000000100000
.....ATCATACTGCTGAGCTTCATTTATCCCT.................................................................................................................................................................................2811.001000100000000
....................................................................................................................................T--CACGGC-ATTTC--ATTC-ACT.....................................................1911.001000001000000
.........................................................................................................C------TT-------AGCGTCTCCACT--CACGGC-....................................................................2111.001001000000000
....................................................................................................................................T--CACGGC-ATTTC--ATTC-ACTT....................................................2011.001000001000000
.................................................................................................TTATTATAC------TT-------AGCGTCTCCACT--...........................................................................2311.001010000000000
.................................................................................................................................................................GTACATCACCGCCGAGAAGGAGAAAC.......................2611.001100000000000
.................................................................................................................................CACT--CACGGC-ATTTC--ATTC-ACT.....................................................2211.001000001000000
....................................................................................................................................T--CACGGC-ATTTC--ATTC-ACTTG...................................................2111.001010000000000
....................................................................................................................................T--CACGGC-ATTTC--ATTC-AC......................................................1811.001010000000000
....................................................................................................................................T--CACGGC-ATTTC--ATTC-ACTTGCA.................................................2311.001000001000000
....................................................................................................................................T--CACGGC-ATTTC--ATTC-ACTTGCAGT...............................................2511.001100000000000
..................................................................................................TATTATAC------TT-------AGCGTCTCCACT--CACGGC-A...................................................................2911.001000000010000
..................................................................CTATGCCG------GGATTG--------TGGTT...............................................................................................................1911.001000000100000
...................................................................................................................................CT--CACGGC-ATTTC--ATTC-ACTTGCA.................................................2411.001000001000000
..............................................................................................................................................ATTTC--ATTC-ACTTGCA.................................................1620.501000000000001
droSec2
CGCTGATCATACTGCTGAGCTTCATTTATCCCTGCACGTACATCACCAAGGTAAGTGA--------CTATGCCG------GGATTG--------TGGTTATTATAC------TT-------AGAGTCTCCACT--CACGGC-ATTTC--ATTC-ACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATCSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-ACTTG...................................................231170.00170001169
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-ACTTGCAG................................................261166.00166158152
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-ACTTGCA.................................................251150.00150211146
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-ACTT....................................................221105.00105034755
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-ACTTGC..................................................24177.007700176
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-ACT.....................................................21171.0071104624
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-ACTTGCAGT...............................................27165.00655301812
....................................................................................................................................T--CACGGC-ATTTC--ATTC-ACTTGCAGT...............................................25125.002511554
...................................................................................................................................CT--CACGGC-ATTTC--ATTC-ACTTGCAG................................................25117.001700116
...................................................................................................................................CT--CACGGC-ATTTC--ATTC-ACTTG...................................................22116.001600016
...................................................................................................................................CT--CACGGC-ATTTC--ATTC-ACTTGCA.................................................24113.001300112
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGG.................................................................................................................25111.00110830
....................................................................................................................................T--CACGGC-ATTTC--ATTC-ACTTGCAG................................................24110.00100028
...................................................................................................................................CT--CACGGC-ATTTC--ATTC-ACTTGC..................................................2319.0090009
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------T...................................................................................................................2317.0073121
....................................................................................................................................T--CACGGC-ATTTC--ATTC-ACTTGC..................................................2216.0060024
...................................................TAAGTGA--------CTATGCCG------GGATTG--------....................................................................................................................2116.0062202
...................................................................................................................................CT--CACGGC-ATTTC--ATTC-ACTT....................................................2116.0060006
........................................................GA--------CTATGCCG------GGATTG--------TGGTTATT............................................................................................................2414.0040202
....................................................AAGTGA--------CTATGCCG------GGATTG--------TGGTT...............................................................................................................2514.0043010
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------....................................................................................................................2214.0042011
..................................................GTAAGTGA--------CTATGCCG------GGAT..............................................................................................................................2014.0041111
...................................................................................................................................CT--CACGGC-ATTTC--ATTC-ACTTGCAGT...............................................2614.0040202
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-AC......................................................2013.0030012
....................................................................................................................................T--CACGGC-ATTTC--ATTC-ACTTGCA.................................................2313.0030012
..................................................GTAAGTGA--------CTATGCCG------GGATT.............................................................................................................................2113.0032001
...................................................................................................................................CT--CACGGC-ATTTC--ATTC-ACT.....................................................2013.0030003
...................................................TAAGTGA--------CTATGCCG------GGATTG--------T...................................................................................................................2213.0031110
....................................................................................................................................T--CACGGC-ATTTC--ATTC-ACTTG...................................................2112.0020020
........................................................GA--------CTATGCCG------GGATTG--------TGGTT...............................................................................................................2112.0022000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TG..................................................................................................................2412.0020200
..................................................................CTATGCCG------GGATTG--------TGGTTATTA...........................................................................................................2312.0021001
.................................................................................................................................CACT--CACGGC-ATTTC--ATTC-ACTTG...................................................2412.0020002
...........................................................................................................................AGTCTCCACT--CACGGC-ATTTC--ATTC-........................................................2512.0020002
.......................................................................................................TAC------TT-------AGAGTCTCCACT--CACGGC-A...................................................................2412.0020002
................................................................................................................TT-------AGAGTCTCCACT--CACGGC-A...................................................................2112.0020002
........................................................................................................AC------TT-------AGAGTCTCCACT--CAC........................................................................1912.0020002
..............................................................................................................................................ATTTC--ATTC-ACTTGCAGT...............................................1812.0020200
........................................................GA--------CTATGCCG------GGATTG--------TGGTTA..............................................................................................................2212.0020200
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGGTT...............................................................................................................2712.0021100
....................................................AAGTGA--------CTATGCCG------GGATTG--------TGGTTATT............................................................................................................2811.0010001
......................................................................................................ATAC------TT-------AGAGTCTCCACT--CACGGC-A...................................................................2511.0011000
..................................................................CTATGCCG------GGATTG--------TGGTTATT............................................................................................................2211.0011000
........................................................................................................................................ACGGC-ATTTC--ATTC-ACTTGCA.................................................2111.0010001
.........................................................................................................................................CGGC-ATTTC--ATTC-ACTTGC..................................................1911.0010001
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGGT................................................................................................................2611.0011000
...................................................................TATGCCG------GGATTG--------TGGTTAT.............................................................................................................2011.0010001
.................................................................................................................T-------AGAGTCTCCACT--CACGGC-ATTTC--ATT..........................................................2711.0011000
....................................................AAGTGA--------CTATGCCG------GGATTG--------TGGTTAT.............................................................................................................2711.0010001
.................................................................................................TTATTATAC------TT-------AGAGTCTCCACT--CACGGC-....................................................................2911.0010001
....................................................................................................................................................................................GAGAAACAGCTGAAGGAGGT..........2011.0010100
CGCTGATCATACTGCTGAGC..............................................................................................................................................................................................2011.0010100
..................................................GTAAGTGA--------CTATGCCG------GG................................................................................................................................1811.0010010
.......................................................................................................................................................................................AAACAGCTGAAGGAGGTGAT.......2011.0010100
..............................................................................................................................CTCCACT--CACGGC-ATTTC--ATTC-ACTT....................................................2611.0010100
.........................................................A--------CTATGCCG------GGATTG--------TGG.................................................................................................................1811.0010001
.......................................................................................................................................CACGGC-ATTTC--ATTC-ACTTG...................................................2011.0010001
......................................................................................................................................................................................GAAACAGCTGAAGGAGGT..........1811.0010100
.......................................................TGA--------CTATGCCG------GGATTG--------TGGTTATTA...........................................................................................................2611.0010001
....................................................AAGTGA--------CTATGCCG------GGATTG--------....................................................................................................................2011.0011000
..............CTGAGCTTCATTTATCCCTGCACGTA..........................................................................................................................................................................2611.0010100
....................................................................................................................................T--CACGGC-ATTTC--ATTC-ACTT....................................................2011.0010010
.......................................................................................................................................CACGGC-ATTTC--ATTC-ACTTGCAGT...............................................2411.0010001
.....................................................................................................TATAC------TT-------AGAGTCTCCACT--CACGGC-....................................................................2511.0010001
.....................................................................................................TATAC------TT-------AGAGTCTCCACT--CACGGC-A...................................................................2611.0010100
........................................................................................................AC------TT-------AGAGTCTCCACT--CACGGC-....................................................................2211.0010001
...................................................................................................ATTATAC------TT-------AGAGTCTCCACT--...........................................................................2111.0010100
......................................................GTGA--------CTATGCCG------GGATTG--------TGGTT...............................................................................................................2311.0011000
...................................................................................................ATTATAC------TT-------AGAGTCTCCACT--CACGGC-A...................................................................2811.0010010
......................................................GTGA--------CTATGCCG------GGATTG--------TGGTTA..............................................................................................................2411.0011000
........................................................GA--------CTATGCCG------GGATTG--------TGGTTAT.............................................................................................................2311.0011000
.........................................................................................................C------TT-------AGAGTCTCCACT--CACGGC-A...................................................................2211.0010001
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-A.......................................................1911.0010100
droEre2
CGCTGATCATACTGTTGAGCTTTATTTATCCCTGCACGTACATCACCAAGGTAAGTGA--------CAGTGCCG------GGATTG--------TGGTTATTAAAA------AT-------ACCTTCTCCACT--CACGGC-ATTTC--ATTC-ACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATCSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-ACTTG...................................................231184.0018400021802
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-ACTT....................................................221159.00159031106490
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-ACTTGCA.................................................251150.001500321112311
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-ACT.....................................................211147.00147018112251
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-ACTTGCAG................................................261146.00146101241137
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-ACTTGC..................................................241111.0011102019315
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-ACTTGCAGT...............................................27126.00261051712
..................................................GTAAGTGA--------CAGTGCCG------GGATTG--------TGG.................................................................................................................25121.00210031710
..................................................GTAAGTGA--------CAGTGCCG------GGA...............................................................................................................................19121.00210014430
...................................................................................................................................CT--CACGGC-ATTTC--ATTC-ACTTGC..................................................23118.00180000180
...................................................................................................................................CT--CACGGC-ATTTC--ATTC-ACTTGCA.................................................24114.00140010130
..................................................GTAAGTGA--------CAGTGCCG------GGAT..............................................................................................................................20113.0013008320
...................................................................................................................................CT--CACGGC-ATTTC--ATTC-ACTTG...................................................22112.00120000120
...................................................................................................................................CT--CACGGC-ATTTC--ATTC-ACTTGCAG................................................2519.009000090
..................................................GTAAGTGA--------CAGTGCCG------GGATT.............................................................................................................................2119.009004320
...................................................TAAGTGA--------CAGTGCCG------GGATTG--------T...................................................................................................................2216.006001500
..................................................GTAAGTGA--------CAGTGCCG------GGATTG--------TG..................................................................................................................2415.005002210
..................................................GTAAGTGA--------CAGTGCCG------GGATTG--------....................................................................................................................2215.005003200
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-AC......................................................2014.004010120
...................................................TAAGTGA--------CAGTGCCG------GGATTG--------TGG.................................................................................................................2413.003000300
.......................................................................................................................................CACGGC-ATTTC--ATTC-ACTTGCAGT...............................................2413.003001101
..................................................GTAAGTGA--------CAGTGCCG------GGATTG--------TGGT................................................................................................................2613.003002010
..................................................GTAAGTGA--------CAGTGCCG------GGATTG--------T...................................................................................................................2313.003001200
...................................................................................................................................CT--CACGGC-ATTTC--ATTC-ACT.....................................................2013.003000210
...................................................................................................................................CT--CACGGC-ATTTC--ATTC-ACTTGCAGT...............................................2612.002011000
......................................................................................................................................................................................GAAACAGCTCAAGGAGGT..........1812.002001100
...................................................................................................................................CT--CACGGC-ATTTC--ATTC-ACTT....................................................2112.002000020
..............................................................................................................................................ATTTC--ATTC-ACTTGCAGT...............................................1812.002000200
..................................................GTAAGTGA--------CAGTGCCG------GG................................................................................................................................1812.002001100
.......................................................................................................................................CACGGC-ATTTC--ATTC-ACTTGCA.................................................2212.002000110
..................................................GTAAGTGA--------CAGTGCCG------GGATTG--------TGGTT...............................................................................................................2712.002001001
..................................................................................................................................................................................AGGAGAAACAGCTCAAGGAGGT..........2212.002001100
.................................................................................................................................CACT--CACGGC-ATTTC--ATTC-ACTTGCAG................................................2712.002000020
..................................................................................................................................ACT--CACGGC-ATTTC--ATTC-A.......................................................1912.002010010
....................................................................................................................................T--CACGGC-ATTTC--ATTC-ACTTGCA.................................................2312.002000020
................................................................................................................................................................................GAAGGAGAAACAGCTCAAGGA.............2111.001000100
......................................................GTGA--------CAGTGCCG------GGATTG--------....................................................................................................................1811.001001000
............................................................................................................................TTCTCCACT--CACGGC-ATTTC--ATTC-ACT.....................................................2711.001000010
........................................................GA--------CAGTGCCG------GGATTG--------TGGT................................................................................................................2011.001100000
....................TTTATTTATCCCTGCACGTACAT.......................................................................................................................................................................2311.001000100
....................................................AAGTGA--------CAGTGCCG------GGATTG--------TG..................................................................................................................2211.001001000
......................................................GTGA--------CAGTGCCG------GGATTG--------TG..................................................................................................................2011.001001000
...................................................TAAGTGA--------CAGTGCCG------GGATTG--------....................................................................................................................2111.001001000
.................................................................................................................................................................GTACATCACCGCCGAGAAGGAGA..........................2311.001001000
..................................................................................................................................................................................AGGAGAAACAGCTCAAGGAGGTGATGA.....2711.001001000
......................................................GTGA--------CAGTGCCG------GGATTG--------TGGTTAT.............................................................................................................2511.001000100
.......................................................TGA--------CAGTGCCG------GGATTG--------T...................................................................................................................1811.001000100
...................................................................AGTGCCG------GGATTG--------TGGTT...............................................................................................................1811.001000100
.................................................................................................................T-------ACCTTCTCCACT--CACGGC-ATT.................................................................2211.001000010
....................................................................................................................................T--CACGGC-ATTTC--ATTC-ACT.....................................................1911.001000010
.................................................................................................................................CACT--CACGGC-ATTTC--ATTC-ACTT....................................................2311.001000010
....................................................................................................................................T--CACGGC-ATTTC--ATTC-ACTTGCAG................................................2411.001000010
.........................................................................................................................ACCTTCTCCACT--CACGGC-....................................................................1811.001000010
....................................................................................................................................T--CACGGC-ATTTC--ATTC-ACTTG...................................................2111.001000010
....................................................AAGTGA--------CAGTGCCG------GGATTG--------....................................................................................................................2011.001000010
.....................................................................................................................................................................................AGAAACAGCTCAAGGAGGT..........1911.001001000
.......................................................................................................................................CACGGC-ATTTC--ATTC-ACTTGCAG................................................2311.001000100
.............................................................................................................................TCTCCACT--CACGGC-ATTTC--ATTC-ACTT....................................................2711.001000010
...................................................TAAGTGA--------CAGTGCCG------GGATTG--------TG..................................................................................................................2311.001000100
........................................................GA--------CAGTGCCG------GGATTG--------TGGTTATT............................................................................................................2411.001000100
.................................................................................................TTATTAAAA------AT-------ACCTTCTCC................................................................................2011.001000010
................................................................................................................................................................................GAAGGAGAAACAGCTCAAGGAGGTGA........2611.001000100
.......................................................................................................................................................................................AAACAGCTCAAGGAGGTGAT.......2011.001001000
......................................................................................................................................................................................GAAACAGCTCAAGGAGGTGATGAA....2411.001001000
....................................................................................................................................T--CACGGC-ATTTC--ATTC-ACTTGC..................................................2211.001000010
..................................................................CAGTGCCG------GGATTG--------TGGTTATTAAA.........................................................................................................2511.001001000
.....................................................................................................................................................................................AGAAACAGCTCAAGGAGGTGATGAA....2511.001001000
droYak3
CGCTGATCATACTGCTGAGCTTTATTTACCCATGCACGTACATCACCAAGGTAAGTGA--------CAATGCCG------GGATTG--------TGGTTATTGAAA------AT-------ACCTTCTCCACT--CACGGC-ATTAT--ATTC-ACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATCSizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
..................................................................................................................................ACT--CACGGC-ATTAT--ATTC-ACTTG...................................................231210.002100001161471
..................................................................................................................................ACT--CACGGC-ATTAT--ATTC-ACTTGCA.................................................251109.00109001032760
..................................................................................................................................ACT--CACGGC-ATTAT--ATTC-ACTTGCAG................................................26187.0087120312618
..................................................................................................................................ACT--CACGGC-ATTAT--ATTC-ACTTGC..................................................24182.0082000029476
..................................................................................................................................ACT--CACGGC-ATTAT--ATTC-ACTT....................................................22132.0032030413120
..................................................................................................................................ACT--CACGGC-ATTAT--ATTC-ACT.....................................................21127.002700031680
..................................................................................................................................ACT--CACGGC-ATTAT--ATTC-ACTTGCAGT...............................................27123.002332012132
...................................................................................................................................CT--CACGGC-ATTAT--ATTC-ACTTGCAG................................................25111.001101000100
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------T...................................................................................................................23111.00110070220
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------TGG.................................................................................................................25110.00100010711
...................................................................................................................................CT--CACGGC-ATTAT--ATTC-ACTTGCA.................................................2417.0070000070
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------TGGTT...............................................................................................................2717.0070020401
...................................................................................................................................CT--CACGGC-ATTAT--ATTC-ACTTG...................................................2215.0050000050
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------TGGT................................................................................................................2615.0050030200
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------....................................................................................................................2215.0051020011
...................................................................................................................................CT--CACGGC-ATTAT--ATTC-ACTTGC..................................................2314.0040000040
........................................................GA--------CAATGCCG------GGATTG--------TGGTT...............................................................................................................2114.0040020020
..................................................GTAAGTGA--------CAATGCCG------GG................................................................................................................................1814.0040000040
.................................................................................................................T-------ACCTTCTCCACT--CACGGC-AT..................................................................2114.0040000040
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------TG..................................................................................................................2413.0030020010
.....................................................................................................................................................................................AGAAACAGCTCAAGGAGGT..........1913.0030010011
..................................................GTAAGTGA--------CAATGCCG------GGAT..............................................................................................................................2013.0030000111
....................................................AAGTGA--------CAATGCCG------GGATTG--------TGG.................................................................................................................2313.0030000030
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------TGGTTAT.............................................................................................................2913.0030000300
....................................................AAGTGA--------CAATGCCG------GGATTG--------TGGTTATTG...........................................................................................................2912.0020020000
.......................................................TGA--------CAATGCCG------GGATTG--------TGGTTATTG...........................................................................................................2612.0020000020
...................................................................................................................................CT--CACGGC-ATTAT--ATTC-ACTTGCAGT...............................................2612.0020000011
....................................................................................................................................................................CATCACCGCCGAGAAGGAG...........................1912.0020020000
......................................................GTGA--------CAATGCCG------GGATTG--------T...................................................................................................................1912.0020000020
...................................................................................................................................................................................GGAGAAACAGCTCAAGGAGGT..........2112.0020020000
..................................................................CAATGCCG------GGATTG--------TGGTT...............................................................................................................1912.0020020000
.....................................................AGTGA--------CAATGCCG------GGATTG--------T...................................................................................................................2012.0020010001
................................................................................................................AT-------ACCTTCTCCACT--CACGGC-....................................................................2012.0020000020
...................................................................................................ATTGAAA------AT-------ACCTTCTCCACT--CACGGC-....................................................................2712.0020000020
.................................................................................................................................................................GTACATCACCGCCGAGAAGGA............................2112.0020010010
.................................................................................................................T-------ACCTTCTCCACT--CACGGC-A...................................................................2012.0020000020
..CTGATCATACTGCTGAGCTTTATTTACCC...................................................................................................................................................................................2912.0020000200
.................................................................................................................T-------ACCTTCTCCACT--CACGGC-....................................................................1912.0020000020
..........................................................................................................................................GGC-ATTAT--ATTC-ACTTGCAG................................................2012.0020000020
....................................................................................................................................T--CACGGC-ATTAT--ATTC-ACTTGC..................................................2211.0010000010
......................................................GTGA--------CAATGCCG------GGATTG--------TG..................................................................................................................2011.0010000010
.........................................................................................................A------AT-------ACCTTCTCCACT--CACGGC-....................................................................2111.0010000010
........................................................GA--------CAATGCCG------GGATTG--------TGG.................................................................................................................1911.0010000001
.......................................................................................................AAA------AT-------ACCTTCTCCACT--CACGGC-ATT.................................................................2611.0010000010
......................................................................................................GAAA------AT-------ACCTTCTCCACT--CACGG......................................................................2311.0010000010
..............................................................................................................................................ATTAT--ATTC-ACTTGCAGT...............................................1811.0010000010
.................................................................................................................................CACT--CACGGC-ATTAT--ATTC-ACTTGCAGT...............................................2811.0010000010
........................................................GA--------CAATGCCG------GGATTG--------TGGTTAT.............................................................................................................2311.0010010000
....................................................AAGTGA--------CAATGCCG------GGATTG--------....................................................................................................................2011.0010010000
.................................................................................................................................................................................AAGGAGAAACAGCTCAAGGAGGT..........2311.0010010000
...................................................TAAGTGA--------CAATGCCG------GGA...............................................................................................................................1811.0010000010
...................................................TAAGTGA--------CAATGCCG------GGATTG--------TG..................................................................................................................2311.0010000010
.........................................................................................................................ACCTTCTCCACT--CACGGC-A...................................................................1911.0010000010
.......CATACTGCTGAGCTTTATTTACCCATG................................................................................................................................................................................2711.0010010000
......................................................GTGA--------CAATGCCG------GGATTG--------TGGTTATT............................................................................................................2611.0010000010
......................................................GTGA--------CAATGCCG------GGATTG--------TGGT................................................................................................................2211.0010000010
.................................................................................................................................CACT--CACGGC-ATTAT--ATTC-ACT.....................................................2211.0010000001
.................................................................................GATTG--------TGGTTATTGAAA------AT-------ACC......................................................................................2211.0010000001
...................................................TAAGTGA--------CAATGCCG------GGATTG--------TGG.................................................................................................................2411.0010000010
......................................................................................................................................................................................GAAACAGCTCAAGGAGGT..........1811.0010000010
.................................................................................................................................CACT--CACGGC-ATTAT--ATTC-ACTTGCAG................................................2711.0010000010
......................................................GTGA--------CAATGCCG------GGATTG--------TGG.................................................................................................................2111.0010000010
.................................................................................................TTATTGAAA------AT-------ACCTTCTCCACT--CACGGC-....................................................................2911.0010000010
............................................................................................................................TTCTCCACT--CACGGC-ATTAT--ATTC-ACTTG...................................................2911.0010000010
.........................................................................................................................ACCTTCTCCACT--CACGGC-ATT.................................................................2111.0010000010
......................................................................................................................................................................................GAAACAGCTCAAGGAGGTGAT.......2111.0010010000
.....................................................AGTGA--------CAATGCCG------GGATTG--------TGGTTA..............................................................................................................2511.0010000001
...................................................................................................ATTGAAA------AT-------ACCTTCTCCACT--CACGG......................................................................2611.0010000010
................................................................................................................AT-------ACCTTCTCCACT--CACGGC-ATT.................................................................2311.0010000010
..................................................................................................................................................................................AGGAGAAACAGCTCAAGGAGGT..........2211.0010010000
.......................................................................................................................................CACGGC-ATTAT--ATTC-ACTTGCAGT...............................................2411.0010001000
...............................................................................................................................................................................AGAAGGAGAAACAGCTCAAGGA.............2211.0010010000
......................................................................GCCG------GGATTG--------TGGTTATTGAA.........................................................................................................2111.0010000010
..................................................................CAATGCCG------GGATTG--------TGGTTATTG...........................................................................................................2311.0010010000
..........................................................................................................................................GGC-ATTAT--ATTC-ACTTGCAGT...............................................2111.0010000010
..............................................................................................................................................................................GAGAAGGAGAAACAGCTCAAG...............2111.0010000010
CGCTGATCATACTGCTGAGC..............................................................................................................................................................................................2011.0010000010
....................................................AAGTGA--------CAATGCCG------GGATTG--------T...................................................................................................................2111.0010010000
..................................................GTAAGTGA--------CAATGCCG------GGATT.............................................................................................................................2111.0010000010
..................................................................................................................................ACT--CACGGC-ATTAT--ATTC-ACTTGCAGTA..............................................2811.0010000010
..................................................................CAATGCCG------GGATTG--------TGGT................................................................................................................1811.0010000010
....................................................................................................................................T--CACGGC-ATTAT--ATTC-ACTTGCA.................................................2311.0010000010
....................................................................ATGCCG------GGATTG--------TGGTTATTGAA.........................................................................................................2311.0010000010
.................................................................................................................T-------ACCTTCTCCACT--CACGGC-ATT.................................................................2211.0010000010
.GCTGATCATACTGCTGAGCT.............................................................................................................................................................................................2011.0010010000
...................................................................AATGCCG------GGATTG--------TGGTTA..............................................................................................................1911.0010010000
....................................................AAGTGA--------CAATGCCG------GGATTG--------TGGT................................................................................................................2411.0010010000
.....................................................AGTGA--------CAATGCCG------GGATTG--------....................................................................................................................1911.0010010000
....................................................................................................................................................................................GAGAAACAGCTCAAGGAGGTGATGA.....2511.0010000010
...........................................................................................................................CTTCTCCACT--CACGGC-ATT.................................................................1911.0010000010
.......................................................................................................................................CACGGC-ATTAT--ATTC-ACTTGC..................................................2111.0010000100
....................................................AAGTGA--------CAATGCCG------GGATTG--------TG..................................................................................................................2211.0010010000
....................................................................................................................................T--CACGGC-ATTAT--ATTC-ACTTGCAGT...............................................2511.0010001000
......................................................GTGA--------CAATGCCG------GGATTG--------TGGTTATTG...........................................................................................................2711.0010000010
....................................................................ATGCCG------GGATTG--------TGGTTATT............................................................................................................2011.0010010000
................................................................................................................................................................................GAAGGAGAAACAGCTCAAGGAGGT..........2411.0010010000
..............................................................................................................................................................................GAGAAGGAGAAACAGCTCAAGGAGGTGA........2811.0010010000
....GATCATACTGCTGAGCTTT...........................................................................................................................................................................................1911.0010010000
..................................................GTAAGTGA--------CAATGCCG------GGA...............................................................................................................................1911.0010010000
....................................................AAGTGA--------CAATGCCG------GGAT..............................................................................................................................1811.0010000010
.....................................................AGTGA--------CAATGCCG------GGATTG--------TGG.................................................................................................................2211.0010000010
.......................................................................................................................................CACGGC-ATTAT--ATTC-ACTTGCA.................................................2211.0010000100
..................................................................................................................................................................................AGGAGAAACAGCTCAAGGAGGTGATG......2611.0010010000
.........................................................................................................A------AT-------ACCTTCTCCACT--CACGGC-ATTAT--.............................................................2611.0010000010
droEug1
CGCTGATCATACTGTTGAGCTTCATCTATCCATGCACGTATATCACCAAGGTAAGTGG--------CTATGCCG------GGATCG--------TGGTTGATCTAT------GT-------ACCTTCTCCACT--CACGGC-ATTTC--ATTC-ACTTGTAGTACATCACCGCTGAAAAGGAGAAGCAGCTCAAGGAGGTAATGAAGATCSizeHit CountTotal NormTotal
No Reads
droBia1
CGCTGATCATACTGCTCAGCTTCATCTACCCCTGCACGTACATCACCAAAGTAAGTGG--------CCATGCCG------GGATTG--------TGGTTTAA---C-------CAGA-GGTTCCTCCTCCACT--CACGGC-ATTTC--ATTC-ACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATCSizeHit CountTotal NormTotal
No Reads
droTak1
CGCTGATCATACTGCTGAGCTTCATCTATCCCTGCACGTACATCACCAAGGTAAGTGG--------CTATGCCG------GGATTG--------TGGTTTACAATA---------GAAAG-ATCCCCTCCACT--CACGGC-ATTTC--ATTC-ACTTGCAGTACATCACCGCCGAGAAGGAGAAGCAGCTGAAGGAGGTGATGAAGATCSizeHit CountTotal NormTotal
No Reads
droEle1
CGCTAATCATACTGCTGAGCTTCATCTATCCGTGCACGTACATCACCAAGGTAAGTGG--------GTATGCCG------GGACTG--------TGGTTCTAAATG------CC-------ATCACCACCACT--CACGGC-ATTTC--ATTC-ACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATCSizeHit CountTotal NormTotal
No Reads
droRho1
CGCTGATCATACTGCTGAGCTTCATCTATCCCTGCACGTACATCACCAAGGTAAGTGG--------GTATGCCG------GGATTG--------TGGTTAAT----------AC-------ACCTCCTCCACT--CACGGC-ATTTC--ATTC-ACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATCSizeHit CountTotal NormTotal
No Reads
droFic1
CGTTGATTATACTGCTCAGCTTCATTTATCCCTGCACGTACATCACCAAGGTAAGTTT--------ATATTTATTT-GTGTTGGT---------------------------GT-------ACCTCCTCCACT--CACAAC-ATTTC--ATTC-ACCTGCAGTTCATTACCGCCGAGAAGGAGAAGCAGCTCAAGGAGGTGATGAAGATCSizeHit CountTotal NormTotal
No Reads
droKik1
CACTGATCATCTTGCTGAGCTTCATCTATCCGTGCACGTACATCACCAAGGTAAGTCT-------------CCGAGAACGGGAACGAATCGCACAGATCCATATCT------GT-------AT--------------C--T-GTATC--CTTC-TTGTGTAGTACATCACCGCCGAGAAGGAGAAGCAGCTCAAGGAGGTGATGAAGATCSizeHit CountTotal NormTotal
No Reads
droAna3
ATC------------------------------------------------------------------------------------------------------------------------------------CAAGTT-ATTTC--CTTCAATTTTCAGTTCATAACCGCCGAAAAGGAGAAACAGCTCAAGGAAGTGATGAAAATASizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
......................................................................................................................................................................................GAAACAGCTCAAGGAAGTGA........2012.002200000
......................................................................................................................................................................................GAAACAGCTCAAGGAAGTGATGAA....2411.001010000
....................................................................................................................................................................................GAGAAACAGCTCAAGGAAGT..........2011.001001000
......................................................................................................................................................................................GAAACAGCTCAAGGAAGT..........1811.001000001
......................................................................................................................................................................................GAAACAGCTCAAGGAAGTG.........1911.001100000
droBip1
CGCTGATCATACTGCTCAGTTTCATATATCCCTGCACGTATATAACAAAGGTGAGAGGGACGAGGTCTATA----------------------------GCTTTCGGGTTGTGT-------A------ATACT--TTAAAT-ATTTT--ATTCCAATTTCAGTATATAACCGCCGAAAAGGAAAAACAACTGAAGGAAGTCATGAAGATCSizeHit CountTotal NormTotal
No Reads
dp5
CGCTGATTATCCTCCTCAGCTTCATCTATCCGTGCACGTACATCACAAAGGTAAGTGG--------CTATGCCGCG-ACGGGATTG--------A---------AC------CT-CT-CAT-CTCTCACCTCT--CACGGC-ATATC--AATC-ACTTGCAGTACATCACCGCCGAGAAGGAGAAGCAGCTCAAGGAGGTAATGAAGATCSizeHit CountTotal NormTotalV112
Male-body		V043
Embryo		V051
Head		M022
Male-body		M040
Female-body		M059
Embryo		M062
Head
..................................................................................................................................TCT--CACGGC-ATATC--AATC-ACTTGCA.................................................2511033.0010334281918177886
..................................................................................................................................TCT--CACGGC-ATATC--AATC-ACTTGCAG................................................2611028.0010289191218338866
..................................................................................................................................TCT--CACGGC-ATATC--AATC-ACTTGC..................................................241879.00879247138566414
..................................................................................................................................TCT--CACGGC-ATATC--AATC-ACTTG...................................................231789.00789114164019123
..................................................................................................................................TCT--CACGGC-ATATC--AATC-ACTT....................................................221215.0021541201153531
..................................................................................................................................TCT--CACGGC-ATATC--AATC-ACT.....................................................21189.00895112153512
...................................................................................................................................CT--CACGGC-ATATC--AATC-ACTTGCAG................................................25176.007600007402
...................................................................................................................................CT--CACGGC-ATATC--AATC-ACTTGCA.................................................24175.007500007311
..................................................................................................................................TCT--CACGGC-ATATC--AATC-ACTTGCAGT...............................................27166.006691404660
..................................................GTAAGTGG--------CTATGCCGCG-ACGGG................................................................................................................................23148.004801103772
...................................................................................................................................CT--CACGGC-ATATC--AATC-ACTTG...................................................22143.004300004300
...................................................................................................................................CT--CACGGC-ATATC--AATC-ACTTGC..................................................23132.003200002705
....................................................................................................................................T--CACGGC-ATATC--AATC-ACTTGCAG................................................24112.001200001110
...................................................................................................................................CT--CACGGC-ATATC--AATC-ACTT....................................................21111.001100001100
..................................................................................ATTG--------A---------AC------CT-CT-CAT-CTCTCACC................................................................................2218.0080000701
.................................................................................................................................CTCT--CACGGC-ATATC--AATC-ACTTGC..................................................2516.0060000204
...................................................................................................................................CT--CACGGC-ATATC--AATC-ACTTGCAGT...............................................2615.0050000500
..................................................GTAAGTGG--------CTATGCCGCG-ACGGGATT.............................................................................................................................2615.0050000410
....................................................................................................................................T--CACGGC-ATATC--AATC-ACTTGCA.................................................2314.0040200101
.................................................................................................................................CTCT--CACGGC-ATATC--AATC-ACTTGCAG................................................2714.0040000400
..................................................GTAAGTGG--------CTATGCCGCG-ACGGGATTG--------....................................................................................................................2714.0041000210
..................................................GTAAGTGG--------CTATGCCGCG-ACG..................................................................................................................................2114.0040000400
...................................................................................................................................CT--CACGGC-ATATC--AATC-ACT.....................................................2013.0030000300
..................................................................................................................................TCT--CACGGC-ATATC--AATC-AC......................................................2013.0030000201
........................................................................................................................................ACGGC-ATATC--AATC-ACTTGCA.................................................2113.0030000300
..................................................GTAAGTGG--------CTATGCCGCG-ACGGGA...............................................................................................................................2413.0030000300
....................................................................................................................................T--CACGGC-ATATC--AATC-ACTTG...................................................2113.0030000300
..................................................................................................................................TCT--CACGGC-ATATC--AATC-........................................................1813.0030000300
.................................................................................................................................CTCT--CACGGC-ATATC--AATC-ACTT....................................................2312.0020000200
....................................................................................................................................................................CATCACCGCCGAGAAGGAGAAGC.......................2312.0020000200
..................................................GTAAGTGG--------CTATGCCGCG-AC...................................................................................................................................2012.0020000200
....................................................................................................................................T--CACGGC-ATATC--AATC-ACTTGC..................................................2212.0020000200
......................................................GTGG--------CTATGCCGCG-ACGGGATT.............................................................................................................................2212.0020000200
........................................................................................................................................ACGGC-ATATC--AATC-ACTTG...................................................1912.0020000200
.......................................................................................................................................CACGGC-ATATC--AATC-ACTTGCAG................................................2312.0020000200
...................................................................................................................................................................ACATCACCGCCGAGAAGGAGA..........................2112.0020000200
................................................................................................................................................................................GAAGGAGAAGCAGCTCAAGGA.............2112.0021000100
..................................................GTAAGTGG--------CTATGCCGCG-ACGG.................................................................................................................................2212.0020000200
..................GCTTCATCTATCCGTGCACGT...........................................................................................................................................................................2112.0020000200
........................TCTATCCGTGCACGTACATCACA...................................................................................................................................................................2311.0010000100
.............................................................................................................................TCACCTCT--CACGGC-ATATC--.............................................................1911.0010000100
................................................................................................................................................................AGTACATCACCGCCGAGAAGGAGAAGC.......................2711.0010000100
.................................................................................................................................CTCT--CACGGC-ATATC--AATC-ACT.....................................................2211.0010000001
................................................................................................................................................................................GAAGGAGAAGCAGCTCAAGGAG............2211.0010000100
...................................................................TATGCCGCG-ACGGGATTG--------A---------AC------C.................................................................................................2211.0010000100
..................................................................................ATTG--------A---------AC------CT-CT-CAT-CTCTCA..................................................................................2011.0010000100
.......................................................................................................................................CACGGC-ATATC--AATC-ACTTG...................................................2011.0010000100
....................................................................ATGCCGCG-ACGGGATTG--------A---------AC------CT-...............................................................................................2211.0010000100
.......................................................................................................................................CACGGC-ATATC--AATC-ACTTGC..................................................2111.0010000100
...................................................................................................................................................................................GGAGAAGCAGCTCAAGGAGGT..........2111.0010000100
.........................CTATCCGTGCACGTACATCACA...................................................................................................................................................................2211.0010000100
...................................................................................................................................................................ACATCACCGCCGAGAAGGAGAA.........................2211.0010000100
...................................................................................................................................................................................GGAGAAGCAGCTCAAGGA.............1821.0020000200
.....................................................................................................................................................................ATCACCGCCGAGAAGGAGAAGC.......................2211.0010000100
....................................................AAGTGG--------CTATGCCGCG-ACGGGA...............................................................................................................................2211.0010100000
...................................................................................................................................................................ACATCACCGCCGAGAAGGAGAAG........................2311.0010000100
...............................................AAGGTAAGTGG--------CTATGCCGCG-ACGGG................................................................................................................................2611.0010000100
........................................................................................................................................ACGGC-ATATC--AATC-ACTTGCAG................................................2211.0010100000
............................................................................................................................................................................CCGAGAAGGAGAAGCAGCTC..................2011.0010000100
.......................................................................................................................................................................CACCGCCGAGAAGGAGAAGCAGCTC..................2511.0010000001
................................................................................................................................................................................GAAGGAGAAGCAGCTCAAGGAGG...........2311.0010000100
...................................................................................................................................................................ACATCACCGCCGAGAAGGA............................1911.0010000100
...........................................................................................................................................GC-ATATC--AATC-ACTTGCAG................................................1911.0010000100
...................................................TAAGTGG--------CTATGCCGCG-ACGGGATT.............................................................................................................................2511.0010000100
...................................................................................................................................................................ACATCACCGCCGAGAAGGAGAAGC.......................2411.0010000100
.................................................................................................................................................................................AAGGAGAAGCAGCTCAAGGAG............2111.0010000100
.......................................................................................................................................CACGGC-ATATC--AATC-ACTTGCA.................................................2211.0010000100
......................................................................................................................CAT-CTCTCACCTCT--CACGGC-ATAT................................................................2411.0010000100
...................................................TAAGTGG--------CTATGCCGCG-ACGGGA...............................................................................................................................2311.0010000100
..............................................................................................A---------AC------CT-CT-CAT-CTCTCACCTCT--...........................................................................2111.0010000100
.....................................................................................................................................................................ATCACCGCCGAGAAGGAGAAGCAGCTC..................2711.0010010000
..................................................GTAAGTGG--------CTATGCCGCG-A....................................................................................................................................1911.0010000100
.................................................................................................................................................................GTACATCACCGCCGAGAAGGA............................2111.0010000100
......................................................................................................................................................................................GAAGCAGCTCAAGGAGGTAAT.......2111.0010000100
............................................................................................................................................................................................GCTCAAGGAGGTAATGAAGAT.2111.0010000100
...........................................................................................................................................................................................AGCTCAAGGAGGTAATGAAG...2011.0010000100
.........................................................................................................................................CGGC-ATATC--AATC-ACTTGC..................................................1911.0010001000
...................................................TAAGTGG--------CTATGCCGCG-ACGG.................................................................................................................................2111.0010000100
.................................................................................................................................CTCT--CACGGC-ATATC--AATC-ACTTGCA.................................................2611.0010000100
........................................................GG--------CTATGCCGCG-ACGGGATTG--------....................................................................................................................2111.0010000100
........ATCCTCCTCAGCTTCATCT.......................................................................................................................................................................................1911.0010000100
....................................................................................................................................T--CACGGC-ATATC--AATC-ACTTGCAGT...............................................2511.0010000001
.....................................................AGTGG--------CTATGCCGCG-ACGGGAT..............................................................................................................................2211.0010000100
droPer2
CGCTGATTATCCTCCTCAGCTTCATCTATCCGTGCACGTACATCACAAAGGTAAGTGG--------CTATGCCGCG-ACGGGATTG--------A---------AC------CT-CT-CAT-CTCTCACCTCT--CACGGC-ATATC--AATC-ACTTGCAGTACATCACCGCCGAGAAGGAGAAGCAGCTTAAGGAGGTAATGAAGATCSizeHit CountTotal NormTotalV111
Male-body		V042
Embryo		V050
Head		V057
Head		M021
Embryo		M042
Female-body
..................................................................................................................................TCT--CACGGC-ATATC--AATC-ACTTGCAG................................................261216.00216010162711152
..................................................................................................................................TCT--CACGGC-ATATC--AATC-ACTTGCA.................................................251173.0017304101310136
..................................................................................................................................TCT--CACGGC-ATATC--AATC-ACTTG...................................................231106.001060019096
..................................................................................................................................TCT--CACGGC-ATATC--AATC-ACTTGC..................................................24162.00620013058
..................................................................................................................................TCT--CACGGC-ATATC--AATC-ACTT....................................................22159.0059121217720
..................................................................................................................................TCT--CACGGC-ATATC--AATC-ACT.....................................................21119.0019005617
..................................................................................................................................TCT--CACGGC-ATATC--AATC-ACTTGCAGT...............................................27119.0019104707
...................................................................................................................................CT--CACGGC-ATATC--AATC-ACTTGCAG................................................25112.00120000012
..................................................GTAAGTGG--------CTATGCCGCG-ACGGG................................................................................................................................2319.009000207
..................................................................................................................................TCT--CACGGC-ATATC--AATC-........................................................1818.008000071
...................................................................................................................................CT--CACGGC-ATATC--AATC-ACTTGCA.................................................2418.008000008
...................................................TAAGTGG--------CTATGCCGCG-ACGGG................................................................................................................................2214.004000004
................................................................................................................................................................................GAAGGAGAAGCAGCTTAAGGA.............2114.004400000
...................................................................................................................................CT--CACGGC-ATATC--AATC-ACTTGC..................................................2314.004000004
...................................................................................................................................CT--CACGGC-ATATC--AATC-ACTTG...................................................2214.004000004
...................................................................................................................................CT--CACGGC-ATATC--AATC-ACTT....................................................2113.003000201
...................................................TAAGTGG--------CTATGCCGCG-ACGGGA...............................................................................................................................2312.002010100
..................................................................................................................................TCT--CACGGC-ATATC--AATC-AC......................................................2012.002000002
...................................................TAAGTGG--------CTATGCCGCG-ACGG.................................................................................................................................2112.002000002
....................................................................................................................................................................CATCACCGCCGAGAAGGA............................1811.001000001
....................................................................................................................................T--CACGGC-ATATC--AATC-ACTTGCA.................................................2311.001000001
................................................................................................................................................................................GAAGGAGAAGCAGCTTAAGGAG............2211.001000001
...................................................................................................................................CT--CACGGC-ATATC--AATC-ACT.....................................................2011.001000001
........................................................................................................................................ACGGC-ATATC--AATC-ACTTGCA.................................................2111.001000001
...................................................................................................................................................................ACATCACCGCCGAGAAGGAGAA.........................2211.001100000
..................................................GTAAGTGG--------CTATGCCGCG-ACGGGA...............................................................................................................................2411.001000001
.......................................................................................................................................................................CACCGCCGAGAAGGAGAAGC.......................2011.001000001
..................................................................................ATTG--------A---------AC------CT-CT-CAT-CTCTCAC.................................................................................2111.001000001
......................................................GTGG--------CTATGCCGCG-ACGGG................................................................................................................................1911.001000001
.......................................................................................................................AT-CTCTCACCTCT--CACGGC-ATATC--.............................................................2411.001000001
...................................................................................................................................CT--CACGGC-ATATC--AATC-ACTTGCAGT...............................................2611.001000001
....................................................................................................................................T--CACGGC-ATATC--AATC-ACTT....................................................2011.001000100
....................................................................................................................................................................................GAGAAGCAGCTTAAGGAGGTAATGAA....2611.001100000
..................................................................................................................................................................................AGGAGAAGCAGCTTAAGGAGGTAAT.......2511.001000001
....................................................................................................................................T--CACGGC-ATATC--AATC-ACTTGCAG................................................2411.001000100
............................................................................................................................................................................................GCTTAAGGAGGTAATGAAG...1911.001010000
......................CATCTATCCGTGCACGTAC.........................................................................................................................................................................1911.001000001
..........................................................................................................................................................................................CAGCTTAAGGAGGTAATGA.....1911.001000001
........................................................................................................................................................................................AGCAGCTTAAGGAGGTAATG......2011.001000010
......................................................................................................................................................................................GAAGCAGCTTAAGGAGGT..........1811.001100000
droWil2
-----------------------------------------------------------------------------------------------------------------------------------------------TTTG--TTTT-TCTTACAGTACATTACATCGGAGAAGGAGAAACAACTGAAGGAGGTGATGAAAATASizeHit CountTotal NormTotalV117
Male-body		V118
Embryo		V119
Head		M020
Head		M045
Female-body
......................................................................................................................................................................................GAAACAACTGAAGGAGGTGA........2011.00101000
..................................................................................................................................................................................AGGAGAAACAACTGAAGGAGGT..........2211.00101000
..........................................................................................................................................................................................CAACTGAAGGAGGTGATGA.....1911.00101000
.......................................................................................................................................................................TACATCGGAGAAGGAGAA.........................1811.00100001
....................................................................................................................................................................CATTACATCGGAGAAGGA............................1811.00101000
.......................................................................................................................................................................................AAACAACTGAAGGAGGTGAT.......2011.00101000
.......................................................................................................................................................................TACATCGGAGAAGGAGAAA........................1911.00101000
.................................................................................................................................................................GTACATTACATCGGAGAAGGA............................2111.00110000
......................................................................................................................................................................TTACATCGGAGAAGGAGA..........................1811.00101000
.................................................................................................................................................................GTACATTACATCGGAGAAGGAGAA.........................2411.00110000
...................................................................................................................................................................ACATTACATCGGAGAAGGAGAAAC.......................2411.00101000
droVir3
C------------------------------------------------------------------------------------------------------------------------------TCTTCT--CACGAC-ATCCCTTAATC-CCTTGCAGTACGTTGCCAACGAAAAGGAATTGCAACTGAAGGAGGTCATGAAAATASizeHit CountTotal NormTotalV116
Male-body		V053
Head		V047
Embryo		M027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis
....................................................................................................................................T--CACGAC-ATCCCTTAATC-CCTTGCAG................................................2611.0010000000000000000000000000000000010000000000
......................................................................................................................................................................................ATTGCAACTGAAGGAGGTC.........1911.0010000010000000000000000000000000000000000000
.....................................................................................................................................................................................AATTGCAACTGAAGGAGGT..........1911.0010000010000000000000000000000000000000000000
..............................................................................................................................................................................GAAAAGGAATTGCAACTGAAGGA.............2311.0011000000000000000000000000000000000000000000
.....................................................................................................................................................................GTTGCCAACGAAAAGGAA...........................1811.0010000010000000000000000000000000000000000000
.................................................................................................................................................................GTACGTTGCCAACGAAAAGGAATTGC.......................2611.0010000000000000000001000000000000000000000000
.....................................................................................................................................................................GTTGCCAACGAAAAGGAATTGCAA.....................2411.0010000000000100000000000000000000000000000000
droMoj3
----------------------------------------------------------------------------------------------------------------------------------------------ATTTC--GTCG-CCTTACAGTACATCTCCAAGGAGAAGGAAATGCAGTTGAAGGAAGTGATGAAGATASizeHit CountTotal NormTotalV110
Male-body		V056
Head		V049
Head		V041
Embryo		M046
Female-body		M060
Embryo
................................................................................................................................................................................GAAGGAAATGCAGTTGAAGG..............2011.001000010
.........................................................................................................................................................................................GCAGTTGAAGGAAGTGATGA.....2011.001100000
................................................................................................................................................................................GAAGGAAATGCAGTTGAAGGAAGTG.........2511.001100000
droGri2
CATTGATAATACTGCTGAGCTTCATCTATCCCTGTACCTACATTACTAAGGTATGTT--------------CGA------TGATTT--------TGGTTTTTTTTGGCT---TT-------ACTTTCACCGTTTACACGACAATTTC--ATCC-TTTTGCAGTACGTGACCAGTGAGAAGGAGAAGCAGCTGAAGGAGGTGATGAAAATASizeHit CountTotal NormTotalV109
Male-body		M041
Female-body
....................TTCATCTATCCCTGTACCTA..........................................................................................................................................................................2011.00101

Generated: 12/06/2013 at 02:28 PM