ID:

dsi_215

 Coordinate:

chr2R_Mrandom_011:14491-14553 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.3 -14.2 -14.1

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TGGAAGGTATACCTCTCCAGCTCGGTCGCCAGAGCCCCGGATTTTAAGTGTGACGCATCTGTGGAGGTATTGGTCTGCTCCTTGGCTTTTTACACTCTTTTTCTGCTTCTCCTGCTCGTTTGTGGTCCTGTCTCTGTGTTTCCATGTTGCCCAGAATACCAGT
********************************************.......((.(((.....(((((((..((((........))))...))).)))).....))).))..((((......))))..************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR618934
Ovary		 SRR553486
Ovary		 SRR553487
Ovary		 SRR553488
Ovary		 SRR553485
Ovary		 M053
Female-body		 M025
embryo
 GSM343915
embryo
 O002
Head
 O001
Testis
................................................................................................................TGCTCGTTTGTGGTCCTGTCTCTGT.......................... 25 0 1 45.00 45 7 4 19 6 6 2 1 0 0 0
....AGGTATACCTCTCCAGCTCGGTCGC...................................................................................................................................... 25 0 1 37.00 37 20 4 0 3 0 2 8 0 0 0
.........................................................................................TTACACTCTTTTTCTGCTTCTCC................................................... 23 0 1 27.00 27 3 2 5 2 5 10 0 0 0 0
...................................................................................................................TCGTTTGTGGTCCTGTCTCTGTGTT....................... 25 0 1 25.00 25 7 2 14 0 2 0 0 0 0 0
....AGGTATACCTCTCCAGCTCGGTCGCC..................................................................................................................................... 26 0 1 25.00 25 11 4 0 0 0 4 5 1 0 0
.........................................................................................TTACACTCTTTTTCTGCTTCTCCTG................................................. 25 0 1 24.00 24 2 0 1 3 5 7 5 1 0 0
.........................................TTTTAAGTGTGACGCATCTGTGGAGGTA.............................................................................................. 28 0 1 22.00 22 0 15 1 4 2 0 0 0 0 0
...................................................................................................................TCGTTTGTGGTCCTGTCTCTGTGT........................ 24 0 1 21.00 21 12 1 3 2 3 0 0 0 0 0
.........................................................................................TTACACTCTTTTTCTGCTTCTCCTGC................................................ 26 0 1 18.00 18 0 2 5 4 4 3 0 0 0 0
..........................................................................................................................TGGTCCTGTCTCTGTGTTTCAATGTT............... 26 1 1 15.00 15 0 0 6 1 8 0 0 0 0 0
.........................................................................................TTACACTCTTTTTCTGCTTCTCCT.................................................. 24 0 1 14.00 14 1 2 6 2 1 0 0 1 1 0
....AGGTATACCTCTCCAGCTCGGTCG....................................................................................................................................... 24 0 1 14.00 14 10 1 0 0 0 2 0 1 0 0
................................................................................................................TGCTCGTTTGTGGTCCTGTCTCTG........................... 24 0 1 13.00 13 2 1 3 5 1 1 0 0 0 0
................................................................................................................TGCTCGTTTGTGGTCCTGTCTCTGTG......................... 26 0 1 13.00 13 2 0 5 2 2 2 0 0 0 0
................................................................................................................TGCTCGTTTGTGGTCCTGTCTCTGTGTT....................... 28 0 1 10.00 10 0 4 1 2 3 0 0 0 0 0
..........................................TTTAAGTGTGACGCATCTGTGGAGGTA.............................................................................................. 27 0 1 10.00 10 0 6 2 1 1 0 0 0 0 0
........................................................................................................................TGTGGTCCTGTCTCTGTGTTTCAATGT................ 27 1 1 10.00 10 0 0 4 0 6 0 0 0 0 0
................................................................................................................TGCTCGTTTGTGGTCCTGTCTCTGTGT........................ 27 0 1 9.00 9 1 4 2 0 1 1 0 0 0 0
................................................................................................................TGCTCGTTTGTGGTCCTGTCTCT............................ 23 0 1 9.00 9 1 0 6 1 1 0 0 0 0 0
.........................................TTTTAAGTGTGACGCATCTGTGGAGG................................................................................................ 26 0 1 8.00 8 0 3 2 1 1 0 1 0 0 0
...........................................TTAAGTGTGACGCATCTGTGGAGGTA.............................................................................................. 26 0 1 7.00 7 1 4 0 2 0 0 0 0 0 0
............................................TAAGTGTGACGCATCTGTGGAGGTA.............................................................................................. 25 0 1 7.00 7 1 5 0 0 1 0 0 0 0 0
.............................................................................................................................TCCTGTCTCTGTGTTTCAATGTTGC............. 25 1 1 6.00 6 0 0 4 0 2 0 0 0 0 0
.............................................................................................................................TCCTGTCTCTGTGTTTCAATGTTGCCCA.......... 28 1 1 6.00 6 0 0 2 0 4 0 0 0 0 0
...................................................................................................................TCGTTTGTGGTCCTGTCTCTGT.......................... 22 0 1 6.00 6 3 0 2 1 0 0 0 0 0 0
.......................................................................................................................TTGTGGTCCTGTCTCTGTGTTTCAATGT................ 28 1 1 5.00 5 0 0 3 0 2 0 0 0 0 0
....................................................................................................................CGTTTGTGGTCCTGTCTCTGTGTT....................... 24 0 1 5.00 5 0 1 2 1 1 0 0 0 0 0
....AGGTATACCTCTCCAGCTCGGTCGCCAGA.................................................................................................................................. 29 0 1 5.00 5 0 4 0 0 1 0 0 0 0 0
....AGGTATACCTCTCCAGCTCGGT......................................................................................................................................... 22 0 1 4.00 4 2 1 0 1 0 0 0 0 0 0
........................................................................................................................TGTGGTCCTGTCTCTGTGTTTCAATG................. 26 1 1 4.00 4 0 0 3 0 1 0 0 0 0 0
.............................................................................................................................TCCTGTCTCTGTGTTTCCATGTTGCCCA.......... 28 0 1 4.00 4 0 1 0 2 0 0 1 0 0 0
..........................................TTTAAGTGTGACGCATCTGTGGAGG................................................................................................ 25 0 1 4.00 4 0 3 0 1 0 0 0 0 0 0
......................................................................................................................TTTGTGGTCCTGTCTCTGTGTTTC..................... 24 0 1 4.00 4 0 1 2 1 0 0 0 0 0 0
..........................................................................................................................TGGTCCTGTCTCTGTGTTTCAATGTTG.............. 27 1 1 4.00 4 0 0 3 0 1 0 0 0 0 0
.........................................TTTTAAGTGTGACGCATCTGTGGA.................................................................................................. 24 0 1 4.00 4 0 2 0 1 1 0 0 0 0 0
...............TCCAGCTCGGTCGCCAGAGCCCCGGA.......................................................................................................................... 26 0 3 3.67 11 1 1 4 2 3 0 0 0 0 0
.........................................................................................TTACACTCTTTTTCTGCTTCTCCTGCT............................................... 27 0 1 3.00 3 0 0 0 0 3 0 0 0 0 0
................................................................................................................TGCTCGTTTGTGGTCCTGTCTC............................. 22 0 1 3.00 3 0 2 1 0 0 0 0 0 0 0
.......................................................................................................................TTGTGGTCCTGTCTCTGTGTTTCC.................... 24 0 1 3.00 3 1 1 0 1 0 0 0 0 0 0
...................................................................................................................TCGTTTGTGGTCCTGTCTCTGTGTTT...................... 26 0 1 3.00 3 1 0 2 0 0 0 0 0 0 0
....AGGTATACCTCTCCAGCTCGGTCGT...................................................................................................................................... 25 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0
...................................................................................................................TCGTTTGTGGTCCTGTCTCTGTG......................... 23 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
......................................................................................................................TTTGTGGTCCTGTCTCTGTGTTTCAA................... 26 1 1 3.00 3 0 0 1 0 2 0 0 0 0 0
....AGGTATACCTCTCCAGCTCGGTCGCCAG................................................................................................................................... 28 0 1 3.00 3 2 0 0 0 0 1 0 0 0 0
...............TCCAGCTCGGTCGCCAGAGCCCCGG........................................................................................................................... 25 0 3 2.33 7 5 1 0 1 0 0 0 0 0 0
.......................................................................................................................TTGTGGTCCTGTCTCTGTGTTTCAATG................. 27 1 1 2.00 2 0 0 1 0 1 0 0 0 0 0
....AGGTATACCTCTCCAGCTCGGTCGCCA.................................................................................................................................... 27 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0
..........................................................................................................................TGGTCCTGTCTCTGTGTTTCAATGT................ 25 1 1 2.00 2 0 0 1 0 1 0 0 0 0 0
.............................................................................................................................TCCTGTCTCTGTGTTTCAATGTTGCC............ 26 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0
........................................................................................................................TGTGGTCCTGTCTCTGTGTTTCAA................... 24 1 1 2.00 2 0 0 0 0 2 0 0 0 0 0
.........................................TTTTAAGTGTGACGCATCTGTGGAGGT............................................................................................... 27 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0
....AGGTATACCTCTCCAGCTTGGTCGCCAGA.................................................................................................................................. 29 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
...........................................................TGTGGAGGTATTGGTCTGCTCC.................................................................................. 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................TTTGTGGTCCTGTCTCTGTGTTTCA.................... 25 1 1 2.00 2 0 0 0 1 1 0 0 0 0 0
....................................................................................................................CGTTTGTGGTCCTGTCTCTGTGTTTC..................... 26 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0
.....................................CGGATTTTAAGTGTGACGCATCTGT..................................................................................................... 25 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0
..............................................................................................................................CCTGTCTCTGTGTTTCAATGTTGCCCA.......... 27 1 1 2.00 2 0 0 0 0 2 0 0 0 0 0
....................................................................................................................CGTTTGTGGTCCTGTCTCTGTGT........................ 23 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................TTGTGGTCCTGTCTCTGTGTTTCCA................... 25 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0
..........................................................................................................................TGGTCCTGTCTCTGTGTTTCAATG................. 24 1 1 2.00 2 0 0 1 0 1 0 0 0 0 0
.........................................................................................................................GTGGTCCTGTCTCTGTGTTTCAATGT................ 26 1 1 2.00 2 0 0 1 0 1 0 0 0 0 0
.................................GCCCCGGATTTTAAGTGTGACGCATC........................................................................................................ 26 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0
...........................................................TGTGGAGGTATTGGTCTGCTC................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
....................................................................................................................CGTTTGTGGTCCTGTCTCTGTGTTT...................... 25 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0
..........................................................................................TACACTCTTTTTCTGCTTCTCC................................................... 22 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0
........................................................................................................................TGTGGTCCTGTCTCTGTGTTTCC.................... 23 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0
....................................................ACGCATCTGTGGAGGTATTGGTCTGC..................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................TTTGTGGTCCTGTCTCTGTGTT....................... 22 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
...AAGGTATACCTCTCCAGCTCGGTCG....................................................................................................................................... 25 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0
..........................................TTTAAGTGTGACGCATCTGTGGAGGT............................................................................................... 26 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
..................AGCTCGGTCGCCAGAGCCCCGGA.......................................................................................................................... 23 0 5 1.40 7 0 0 5 0 2 0 0 0 0 0
.................CAGCTCGGTCGCCAGAGCCCCGGA.......................................................................................................................... 24 0 5 1.20 6 0 0 4 1 1 0 0 0 0 0
................................................................................................................................TGTCTCTGTGTTTCAATGTTGCCCAGA........ 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....AGGTATACCTCTCCAGCTCGGTTG....................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................TGTGGTCCTGTCTCTGTGT........................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................TGTCTCTGTGTTTCCATGTTGC............. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................TGACGCATCTGTGGAGGTATTGGT......................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
....AGGTATACCTCTCCAGCTCGG.......................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................TGCTCGTTTGTGGTCTTGTCTCTGTGTT....................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........TACCTCCCCAGCTCGGTCGCCAGA.................................................................................................................................. 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................TTGTGGTCCTGTCTCTGTGTTTCCATG................. 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
................................................................................................................TGCTCGTTTGTGGTCTTGTCTCT............................ 23 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0
............................................TAAGTGTGACGCATCTGTGGAGGT............................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................................TTAAGTGTGACGCATCTGTGGAGGT............................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................TAAGTGTGACGCATCTGTGG................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................CGCATCTGTGGAGGT............................................................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................TGTGGAGGTATTGGTCT....................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................TTACACTCTTTTTCTGCTTCTC.................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................TTACACTCTTTTTCTGCTT....................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0
................................................................................................................................TGTCTCTGTGTTTCCATGTTGCCCA.......... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................CTCTTTTTCTGCTTCTCCT.................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................TGGTCCTGTCTCTGTGTTTCAATGCT............... 26 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................GGGACGCATCTGTGGAGG................................................................................................ 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................TTTTAAGTGTGACGCATCTGT..................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................TGTGGAGGTATTGGTCTGCTCCT................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................TTACACTCTTTTTCTGCTTCTCCTGCTCT............................................. 29 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
................................................................AGGTATTGGTCTGCTCCTTG............................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................TGTTAAGTGTGACGCATCTGTGGAGGTA.............................................................................................. 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....AGGTATACCTCGCCAGCTCGGTCGC...................................................................................................................................... 25 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0
.................................................GTGACGCATCTGTGGAGGTATTGGTC........................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................TCACACTCTTTTTCTGCTTCTCCTGCT............................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................CCCCGGATTTTAAGTGTGACGCAT......................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................TGGTCCTGTCTCTGTGTTTCCATGT................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................ATCTGTGGAGGTATTGGTCTGCTCC.................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................CCCGGATTTTAAGTGTGACGCATCTGT..................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...AAGGTATACCTCTCCAGCTCGGTCGCC..................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................TGTTTCCATGTTGCCCAGAATACCAG. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................TAAGTGTGACACATCTGTGGAGGTA.............................................................................................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....AGGTATACCTCTCCAGCTCGGTC........................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................TCTGTGGAGGTATTGGTCTGCTCCTTGA.............................................................................. 28 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
........................................................ATCTGTGGAGGTATTGGTCTG...................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................TCCTGTCTCTGTGTTTCAGTGTTGCCCA.......... 28 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................TTACACTCTTTTTCTGCTTCTCCTA................................................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................TAAGTGTGACGCATCTGTGGAGGTATT............................................................................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................CCTGTCTCTGTGTTTCCATGTTGCC............ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................AGCTCGGTCGCCAGAGCCCCGGATT........................................................................................................................ 25 0 5 1.00 5 1 0 2 1 1 0 0 0 0 0
.............................................................................................................................TCCTGTCTCTGTGTTTCAATGTTG.............. 24 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
............................................................................................................GATCTGCTCGTTTGTGGTCCTGTCTCTG........................... 28 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................TTACACTCCTTTTCTGCTTCT..................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................TCTGTGGAGGTATTGGTCTGCTCC.................................................................................. 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
................................................................................................................TGCTCGTTTGTGGTCCTGTCT.............................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................TGCTCTTTTGTGGTCCTGTCTCTGTGCC....................... 28 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................TTGTGGTCCTGTCTCTGTGTTTCAAT.................. 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...................................................GACGCATCTGTGGAGGTATTGGTCTGC..................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................TTTTAAGTGTGACGCATCTGTGGAG................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................TTTGTGGTCCTGTCTCTGTGT........................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....AGGTATACCTCTCCAGCTCGGGCGC...................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................TGGTCCTGTCTCTGTGTTTCCATGTTG.............. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................TCCTGTCTCTGTGTTTCAATGTTGCCC........... 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................GCCCCGGATTTTAAGTGTGACGCATCTGT..................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................GTGGTCCTGTCTCTGTGTTTCAATGTT............... 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
................................AGCCCCGGATTTTAAGTGTGACGCAT......................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................TGGTCCTGTCTCTGTGTTTCAATGTTGC............. 28 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
............................................TAAGTGTGACGCATCTGTGGAGGTAT............................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................TGGTCCTGTCTCCGTGTTTCAATGTT............... 26 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...................................................................................................................TCGTTTGTGGTCCTGTCTCTGTGTTA...................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................................................................................................................TGTCTCTGTGTTTCAATGTTGCT............ 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................................TTTGTGGTCCTGTCTCTGTGTTTCAATGT................ 29 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................TGGTCCTGTCTCTGTGTTTCCATGTTGC............. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................TCGTTTGTGGTCCTGTCTCTGTGTTTC..................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................CCTGTCTCTGTGTTTCCATGTTGCCCA.......... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................TGGTCCTGCCTCTGTGTTTCAATGTT............... 26 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0
........................................................................................................................TATGGTCCTGTCTCTGTGTTTCCATG................. 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................TTACACTCTTTGTCTGCTTCTCC................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................GTTTGTGGTCCTGTCTCTGTGTT....................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................TGTGGTCCTGTCTCTGTGTTTCAAT.................. 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................................................................................................................TGTCTCTGTGTTTCCATG................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................ATCTGTGGAGGTATTGGTCTGC..................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
TTGGAGGTATACCTCTCCAGCTCGGTCGC...................................................................................................................................... 29 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................ATCTGTGGAGGTATTGGTCTGCTCCT................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................TTGTGGTCCTGTCTCTGTG......................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................TTGTGGTCCTGTCTCTGTGTTTCAA................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...................................................................................................................TCGTTTGTGGTCCTGTCTCTGTGTTTCAA................... 29 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........................................TTTTAAGTGTGACGCATCTGTGGAGGGA.............................................................................................. 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................TGTGACGCATCTGTGGAGGTATTGGTC........................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................ATTTTAAGTGTGACGCATCTGTGGAGGTA.............................................................................................. 29 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
................................................................................................................TGCTCGTTTGTGGTTCTGTCTCTGT.......................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................TTACACTCTTTTTCTGCT........................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................GGTCCTGTCTCTGTGT........................ 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................TTTAAGTGTGACGCATCTGTGGAG................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................TTACACTCTTTTTCTGCCTCTCCTG................................................. 25 1 3 0.67 2 0 2 0 0 0 0 0 0 0 0
................................................................................................CTTTTTCTGCTTCTCCT.................................................. 17 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................TTCTGCTTCTCCTGCTCG............................................. 18 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................TTACACTCTTTTTCTGCCTCTCCTGC................................................ 26 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0
..........ACCTCTCCACCTCGGTCGCCAGA.................................................................................................................................. 23 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0
..............................AGAGCCCCGGATTGT...................................................................................................................... 15 1 6 0.50 3 0 0 2 1 0 0 0 0 0 0
.........................................................................................TTACACTCTTCTTCTGCTTCTTCT.................................................. 24 2 5 0.40 2 0 1 0 0 1 0 0 0 0 0
................CCAGCTCGGTCGCCAGAGCCCCGGA.......................................................................................................................... 25 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0
.........................................................................................TTACACTCTTCTTCTTCTTCTTCTGC................................................ 26 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0
................CCAGCTCGGTCGCCAGAGCCCCGGAT......................................................................................................................... 26 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
...............TCCAGCTCGGGCGCCAGAGCCCCGGA.......................................................................................................................... 26 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................TCTGTGCGTCCATGTTGCCC........... 20 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................TTACACTCTTTTTCTGCTCTGC.................................................... 22 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0
................................................................................................CTTTTTCTGCTTCTCC................................................... 16 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...........................................................TGTGGAGGTATTGGTCAC...................................................................................... 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..................AGCTCGGTCGCCAGAGC................................................................................................................................ 17 0 14 0.21 3 3 0 0 0 0 0 0 0 0 0
...................................................................TATTGGTCTGCTCCTTG............................................................................... 17 0 19 0.21 4 4 0 0 0 0 0 0 0 0 0
..................AGCTCGGTCGCCAGACCCCCGGATTT....................................................................................................................... 26 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0
..................AGCTCGGTCGCCAGAGCCCCGG........................................................................................................................... 22 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
.......................GGTCGCCAGAGCCCCGGA.......................................................................................................................... 18 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
....AGGTATACCGCTCCAGCTCGGTCGT...................................................................................................................................... 25 2 12 0.17 2 2 0 0 0 0 0 0 0 0 0
.........................................................................................TTACACTCATGTTCTGTTTCTCCTG................................................. 25 3 8 0.13 1 0 0 0 0 1 0 0 0 0 0
.................CAGCTCGGTCGCCAGA.................................................................................................................................. 16 0 16 0.13 2 1 0 1 0 0 0 0 0 0 0
.........................................................................................TTACACTCTTTTTCGG.......................................................... 16 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0
................CGAGCTCGGTCGCCAGAGCCC.............................................................................................................................. 21 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................TTACACTTCTTTTCTGCCTCTCC................................................... 23 3 10 0.10 1 0 0 0 0 0 1 0 0 0 0
................CCAGCTCGGTCGCCAGAGCCCCG............................................................................................................................ 23 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..............CTCCAGCTCGGTCGCCAGAGTCCC............................................................................................................................. 24 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.......TATACCACTCCAGCTCGGTCGCCAGA.................................................................................................................................. 26 1 12 0.08 1 0 1 0 0 0 0 0 0 0 0
.......TATACCACTCCAGCTCGGTCGCCAG................................................................................................................................... 25 1 12 0.08 1 0 0 1 0 0 0 0 0 0 0
...............TCCAGCTCGGTCGCCAGAG................................................................................................................................. 19 0 12 0.08 1 1 0 0 0 0 0 0 0 0 0
..................AGCTCGGTCGCCAGAGCCCCG............................................................................................................................ 21 0 12 0.08 1 1 0 0 0 0 0 0 0 0 0
.............................CAGAGCCCCGGATTG....................................................................................................................... 15 1 12 0.08 1 0 0 1 0 0 0 0 0 0 0
..................AGCTCGGTCGCCAGAGCCCC............................................................................................................................. 20 0 12 0.08 1 1 0 0 0 0 0 0 0 0 0
.............TCTCCAACTCGATCGCCGGA.................................................................................................................................. 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0
.............ACTCCAGCTCGGTCGCCA.................................................................................................................................... 18 1 13 0.08 1 0 0 0 1 0 0 0 0 0 0
...............TCCAGCTCGGTCGCCAGACCG............................................................................................................................... 21 2 13 0.08 1 1 0 0 0 0 0 0 0 0 0
...............TCCAGCTCGGTCGCCAGACG................................................................................................................................ 20 2 13 0.08 1 0 0 0 0 1 0 0 0 0 0
....AGATATACCTCTCCAGCTCGGTCG....................................................................................................................................... 24 1 13 0.08 1 1 0 0 0 0 0 0 0 0 0
..............CTCCAGCTCGGTCGCCAG................................................................................................................................... 18 0 13 0.08 1 1 0 0 0 0 0 0 0 0 0
....AGATATACCTCTCCAGCTCGGTC........................................................................................................................................ 23 1 14 0.07 1 1 0 0 0 0 0 0 0 0 0
...............TCCAGCTCGGTCGCCAGA.................................................................................................................................. 18 0 14 0.07 1 0 0 0 1 0 0 0 0 0 0
.....................TCGGTCGCCAGAGCC............................................................................................................................... 15 0 14 0.07 1 0 0 0 0 1 0 0 0 0 0
...........TACCTCCAGCTCGGTCGCCAGA.................................................................................................................................. 22 3 14 0.07 1 0 0 0 0 1 0 0 0 0 0
..................AGCTCGGTCGCCAGA.................................................................................................................................. 15 0 16 0.06 1 0 0 0 0 1 0 0 0 0 0
.................CAGCTCGGTCGCCAG................................................................................................................................... 15 0 17 0.06 1 1 0 0 0 0 0 0 0 0 0
...................................................................TATTGGTCTGCTCCT................................................................................. 15 0 19 0.05 1 1 0 0 0 0 0 0 0 0 0
.....................TCGGTCGCCAGAGCCCTGAAA......................................................................................................................... 21 3 19 0.05 1 0 0 0 1 0 0 0 0 0 0
...................................................................TATTGGTCTGCTCCTTGTCC............................................................................ 20 2 19 0.05 1 0 0 0 1 0 0 0 0 0 0
....................................................................ATTGGTCTGCTCCTTG............................................................................... 16 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...........................................GTATGTGCGACGCATCTGT..................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ACTGGTATTCTGGGCAACATGGAAACACAGAGACAGGACCACAAACGAGCAGGAGAAGCAGAAAAAGAGTGTAAAAAGCCAAGGAGCAGACCAATACCTCCACAGATGCGTCACACTTAAAATCCGGGGCTCTGGCGACCGAGCTGGAGAGGTATACCTTCCA
************************************..((((......))))..((.(((.....((((.(((...((((........))))..))))))).....))).)).......******************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
Ovary		 SRR553485
Ovary		 SRR553487
Ovary		 SRR553486
Ovary		 SRR553488
Ovary		 M053
Female-body		 M025
embryo
 GSM343915
embryo
................................................................AAGAGTGTAAAAAGCCAAGGAGCA........................................................................... 24 0 1 12.00 12 2 2 4 3 1 0 0 0
....................................................................................................................................TGGCGACCGAGCTGGAG.............. 17 0 13 10.69 139 138 0 0 1 0 0 0 0
..................................................................................................TCCACAGATGCGTCACACTTAAAATC....................................... 26 0 1 10.00 10 1 3 3 3 0 0 0 0
..............................................................................................TACCTCCACAGATGCGTCACACTTAAAA......................................... 28 0 1 9.00 9 0 6 2 1 0 0 0 0
..............................................................................................TACCTCCACAGATGCGTCACACTTAAA.......................................... 27 0 1 7.00 7 0 3 2 2 0 0 0 0
................................................................AAGAGTGTAAAAAGCCAAGGAGC............................................................................ 23 0 1 5.00 5 4 1 0 0 0 0 0 0
.............................................................AAAAAGAGTGTAAAAAGCCAAGGAGC............................................................................ 26 0 1 5.00 5 4 1 0 0 0 0 0 0
..............................................................................................TACCTCCACAGATGCGTCACACTT............................................. 24 0 1 5.00 5 4 0 0 0 0 0 1 0
..................................................................................................................................TCTGGCGACCGAGCTGGAGAGGTA......... 24 0 1 4.00 4 1 0 2 1 0 0 0 0
................................................................AAGAGTGTAAAAAGCCAAGGAGCAGA......................................................................... 26 0 1 4.00 4 0 1 1 1 1 0 0 0
.....................................................................................................................................GGCGACCGAGCTGGAG.............. 16 0 16 3.88 62 62 0 0 0 0 0 0 0
................................................................AAGAGTGTAAAAAGCCAAGGA.............................................................................. 21 0 1 3.00 3 2 1 0 0 0 0 0 0
.............................................................AAAAAGAGTGTAAAAAGCCAAGGA.............................................................................. 24 0 1 3.00 3 2 1 0 0 0 0 0 0
..........................................................................................CCAATACCTCCACAGATGCGTCACAC............................................... 26 0 1 3.00 3 0 1 0 2 0 0 0 0
...............................GACAGGACCACAAACGAGCAGGAGA........................................................................................................... 25 0 1 3.00 3 1 2 0 0 0 0 0 0
....................................................................................................CACAGATGCGTCACACTTAAAATCCGG.................................... 27 0 1 3.00 3 0 3 0 0 0 0 0 0
..........................................................................................................................TCCGGGGCTCTGGCGACCGAGCTGG................ 25 0 3 2.67 8 1 0 1 0 1 1 4 0
...............................................................AAAGAGTGTAAAAAGCCAAGGA.............................................................................. 22 0 1 2.00 2 2 0 0 0 0 0 0 0
....................TGAAACACAGAGACAGGACCA.......................................................................................................................... 21 1 1 2.00 2 0 2 0 0 0 0 0 0
................................................................AAGAGTGTAAAAAGCCAAGGAG............................................................................. 22 0 1 2.00 2 2 0 0 0 0 0 0 0
............................................................................................AATACCTCCACAGATGCGTCACACTTAA........................................... 28 0 1 2.00 2 0 0 2 0 0 0 0 0
....................................................................................................................................TGGCGACCGAGCTGGAGAGGTATACCT.... 27 0 1 2.00 2 0 0 1 1 0 0 0 0
...................TGGAAACACAGAGACAGGACCACAAA...................................................................................................................... 26 0 1 2.00 2 1 0 0 0 1 0 0 0
................................................................AAGAGTGTAAAAAGCCAAGGAGCAG.......................................................................... 25 0 1 2.00 2 1 0 0 0 0 1 0 0
................................................................AAGAGTGTAAAAAGCCA.................................................................................. 17 0 1 2.00 2 2 0 0 0 0 0 0 0
................................................................AAGAGTGTAAAAAGCC................................................................................... 16 0 1 2.00 2 2 0 0 0 0 0 0 0
..............................................................................................TACCTCCACAGATGCGTCACACTTA............................................ 25 0 1 2.00 2 1 0 0 0 0 1 0 0
.................................CAGGACCACAAACGAGCAGGAGAAGCAGA..................................................................................................... 29 0 1 2.00 2 0 2 0 0 0 0 0 0
..................................................................................................TCCACAGATGCGTCACACTTAAAA......................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0
....................................................................................................CACAGATGCGTCACACTTAAAATC....................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0
................................................................................................................ACACTTAAAATCCGGGGCTC............................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................TACCTCCACAGATGCGTCA.................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................GATGCGTCACACTTAAAATC....................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0
..........TGGGCAACATTGAAACACAGAGACAGG.............................................................................................................................. 27 1 1 1.00 1 0 1 0 0 0 0 0 0
........................................................................................GACCAATACCTCCACAGATGCGTCACA................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................AAAATCCGGGGCTCTGGCGACCGAGC................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
....................TGAAACACAGAGACAGGACCACAAA...................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................GTAAAAAGCCAAGGAGCAGA......................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................TTTAAACTCGGGGGCTCTGGCGAC........................ 24 3 1 1.00 1 0 0 1 0 0 0 0 0
....................................................................GTGTAAAAAGCCAAGGAGCA........................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................ACAGATGCGTCACACTTAAAA......................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................................CTGGCGACCGAGCTGGAGA............. 19 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................TCCACAGATGCGTCACACTTAAAATCC...................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0
............................AGAGACAGGACCACAAACGAGCA................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................AATACCTCCACAGATGCGTCACACT.............................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0
.............................................................AGAAAGAGTGTAAAAAGCCAAGGA.............................................................................. 24 1 1 1.00 1 0 1 0 0 0 0 0 0
...........................................................................................CAATACCTCCACAGATGCGTCACAC............................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1
................................................................AAGAGTGTAAAAAGCCAAGGAGCAGAC........................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................TACCTCCACAAATGCGTCACACTTAAAA......................................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................AGTGTAAAAAGCCAAGGAGCA........................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................TGGCGACCGAGCTGGAGAGGTA......... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................................TAAAATCCGGGGCTCTGGCGACCGAG.................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
....................TGAAACACAGAGACAGGACCACAAACGA................................................................................................................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................CCAATACCTCCACAGATGCGTCACACT.............................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0
.............................................................AAAAAGAGTGTAAAAAGC.................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................ACCAATACCTCCACAGATGCGTCACAC............................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0
.......................................................AAGCAGAAAAAGAGTGTAAAAAGCC................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
........TCTGGGCAACATGGAAACACAGAGAC................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................ACCTCCACAGATGCGTCACACTTA............................................ 24 0 1 1.00 1 0 0 0 0 0 1 0 0
..............................................................................................TACCTCCACAGATGCGTCACACT.............................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................AGACCAATACCTCCACAGATGCGTCA.................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................GACAGGACCACAAACGAGCAGGAGAAGCA....................................................................................................... 29 0 1 1.00 1 0 0 0 1 0 0 0 0
..................................AGGACCACAAACGAGCAGGAGAAGCAGA..................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0
..................................................................................................TCCACAGATGCGTCACACTTAAAATCCG..................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0
...........................CAGAGACAGGACCACAAACGATCAGGA............................................................................................................. 27 1 1 1.00 1 0 0 0 1 0 0 0 0
..TGGTATTCTGGGCAACATTGAAACACAGA.................................................................................................................................... 29 1 1 1.00 1 0 1 0 0 0 0 0 0
..TGGTATTCTGGGCAACATTGAAACACAGAGA.................................................................................................................................. 31 1 1 1.00 1 0 1 0 0 0 0 0 0
..TGGTATTCTGGGCAACATTGAAACACAG..................................................................................................................................... 28 1 1 1.00 1 0 0 1 0 0 0 0 0
..........................................................................................................TGCGTCACACTTAAAATCCGGGGCTCTG............................. 28 0 1 1.00 1 0 0 0 0 1 0 0 0
....................................................................GTGTAAAAAGCCAAGGAGCAGTC........................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................TACCTCCACAGATGCGTCACAC............................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
.............GCAACATGGAAACACAGAGAC................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................AAAAAGAGTGTAAAAA...................................................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................AATACCTCCACAGATGCGTC................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................AATACCTCCACAGATGCGTCACACTT............................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0
................................................................AAGAGTGTAAAAAGCCAAG................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................................CTGGCGACCGAGCTGGAG.............. 18 0 13 0.85 11 11 0 0 0 0 0 0 0
..........................................................................................................................TCCGGGGCTCTGGCGACCGAGCTG................. 24 0 5 0.60 3 1 0 0 0 1 0 1 0
..................................................................................................................................TCTGGCGACCGAGGTGGAGA............. 20 1 2 0.50 1 0 0 0 1 0 0 0 0
...................................................................................................................................CTGGCGACCGAGCTGGATA............. 19 1 2 0.50 1 0 1 0 0 0 0 0 0
....................................................................................................................................TGGCGACCGAGCTGGA............... 16 0 14 0.43 6 6 0 0 0 0 0 0 0
.......................................................................................................................AAATCCGGGGCTCTGGCGACCGAG.................... 24 0 5 0.40 2 1 0 0 0 0 1 0 0
..................................................................................................................................TCTGGCGACCGAGCTGGAG.............. 19 0 13 0.38 5 5 0 0 0 0 0 0 0
..........................................................................................................................TCCGGGGCTCTGGCGACCGAGCTGGA............... 26 0 3 0.33 1 0 0 0 0 1 0 0 0
..........................................................................................................................TCCGGGGCTCTGGCGACCGAGCTGGAG.............. 27 0 3 0.33 1 1 0 0 0 0 0 0 0
........................................................................................................................AATCCGGGGCTCTGGCGACCGAGCTG................. 26 0 5 0.20 1 1 0 0 0 0 0 0 0
..........................................................................................................................TCCGGGGCTCTGGCGACCGAGC................... 22 0 5 0.20 1 0 0 0 0 0 0 0 1
............................................................................................................................CGGGGCTCTGGCGACCGAGC................... 20 0 12 0.17 2 2 0 0 0 0 0 0 0
..................................................................................................................................TCTGGCGACCGAGCTGGA............... 18 0 14 0.14 2 2 0 0 0 0 0 0 0
....................................................................................................................................TGGCGACCGAGCTGG................ 15 0 15 0.13 2 2 0 0 0 0 0 0 0
..................ATGGAAACACCGGGTCAGGA............................................................................................................................. 20 3 9 0.11 1 0 0 0 1 0 0 0 0
...................................................................AGTGTAAAAAGACAAGGAGC............................................................................ 20 1 10 0.10 1 0 1 0 0 0 0 0 0
............................................................................................................................CGGGGCTCTGGCGACCGAGCTGGA............... 24 0 10 0.10 1 1 0 0 0 0 0 0 0
..................................................................................................................................TCTGGCGACCGAGCTGACTA............. 20 3 10 0.10 1 1 0 0 0 0 0 0 0
.................................................................................................................................CTCTGGCGACCGAGCTGGAG.............. 20 0 12 0.08 1 1 0 0 0 0 0 0 0
............................................................................................................................CGGGGCTCTGGCGACCGAGCTG................. 22 0 12 0.08 1 0 0 0 0 0 1 0 0
....................................................................................................................................TAGCGACCGAGCTGGAG.............. 17 1 13 0.08 1 1 0 0 0 0 0 0 0
....................................................................................................................................TGGCGACCGAGCTGGAGGG............ 19 1 13 0.08 1 1 0 0 0 0 0 0 0
....................................................................................................................................TGGCGACCTAGCTGGAG.............. 17 1 13 0.08 1 1 0 0 0 0 0 0 0
....................................................................................................................................TGACGACCGAGCTGGAG.............. 17 1 13 0.08 1 1 0 0 0 0 0 0 0
..................................................................................................................................TCTGGCGACCGAGCTGGAGT............. 20 1 13 0.08 1 1 0 0 0 0 0 0 0
.......................................................................................................................AAAACCGGGGCTCTGGCGAC........................ 20 1 13 0.08 1 1 0 0 0 0 0 0 0
...................................................................................................................................CTGGCGACCGAGCTGGA............... 17 0 14 0.07 1 1 0 0 0 0 0 0 0
.............................................................................................................................GGGGCTCTGGCGACCGA..................... 17 0 14 0.07 1 1 0 0 0 0 0 0 0
................................................................................................................................GCTCTGGCGACCGAGC................... 16 0 14 0.07 1 1 0 0 0 0 0 0 0
............................................................................................................................CGGGGCTCTGGCGACC....................... 16 0 15 0.07 1 1 0 0 0 0 0 0 0
....................................................................................................................................TGGCGACCGATCTGGAG.............. 17 1 15 0.07 1 1 0 0 0 0 0 0 0
..................................................................................................................................TCTGGCGACCGAGCTG................. 16 0 16 0.06 1 1 0 0 0 0 0 0 0
......................................................................................................................................GCGACCGAGCTGGAG.............. 15 0 16 0.06 1 1 0 0 0 0 0 0 0
....................................................................................................................................TGGCGACCGAGCTGGAA.............. 17 1 17 0.06 1 1 0 0 0 0 0 0 0
....................................................................................................................................TGGCGACCGAGCCGGAG.............. 17 1 17 0.06 1 1 0 0 0 0 0 0 0
.....................................................................................................................................GGCGACCGAGCTGGAGTT............ 18 2 19 0.05 1 1 0 0 0 0 0 0 0
...............................................AGCAGGAGAGGCAGAAA................................................................................................... 17 1 19 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................................GGCGACCGAGCCGGAG.............. 16 1 20 0.05 1 1 0 0 0 0 0 0 0
............................................................................................................................CGGGACTCTGGCGAC........................ 15 1 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................................GGCGACCGAGCTGGTA.............. 16 2 20 0.05 1 1 0 0 0 0 0 0 0
..........................................................................................................................................CCGAGCTGGAGAGGGTCAC...... 19 3 20 0.05 1 0 0 0 0 0 0 0 0
.....................................................................................................................................GGCGACTGAGCTGGAG.............. 16 1 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 chr2R_Mrandom_011:14441-14603 + dsi_215 TGGAAGGTATACCTCTCCAGCTCGGTCGCCAGAGCCCCGGAT-TTTAAGTGTGACGCATCTGTGGAGG-------TATTGGTCTGCTCCTTGGCTTTT-TACACTCTTTTTCTGC-T-T-CTC-CTGCTCGT---TT--GTGGTCC-TGTCTCTGTGTTTCCATG-----TTGCCCAGAATACCAGT
droSec2 scaffold_327:6862-7028 + TGGGAGTTATAATGATCCAGCTCGGTCGCCAGAGCCCCGTAT-TTAAAGTGTGACGCCTAAGCTG-GGGGTTGGCTATTGGTCTGCTCCTTGACTTTT-TACACTCTAGTTCTGC-T-T-CTC-CTGCTCGT---TT--GTGGTGC---TCTCTTAGTTTCCAAG-----TTGCCCAAAATACCAGT
dm3 chr2R:688226-688400 + TGGGAGGTATACCGCTCCAGCTTGGTCGACAGAGCCCCGTAT-TTAAAGTGTGCCGCATAAGCTGATAGGTTGGCTATTGATCTGCTCCTTGACTTCT-TACACTATTATTCTGC-C-T-TTC-CAGCTCGT---TT--GTGGTCC-TGTCCCTGGGTTTCCATGGGATGTTGCCAATCATAACTGT
droEre2 scaffold_4929:23422950-23423122 - TGGGAGTTATACCGCTCCAGCTCGGTCGCCAGTGCCCCTGATT--TAGGTGTACCGCGTGAGCGGTGGGGTTGGCTATTGGTCTGCTCCTTGACCTTT-AACACCTTTAATT-AC-T-AG-CCCGAGCCTTT---TG--GGTCTAT-TTTCGCTGTGATTCCATGAGTTGTCGTCAAA-ATTCTCAT
droYak3 2L:21180874-21181047 - TGGGAGTTATACCGCTCCTGCTCGGTCGCCAGAGCCCCGTTTT--TCGGTGTACCGCGTAAGCGGCGGGTTTGGCTGTTAGTCGGCTCCTTGACCTTC-GACACCTATATTT-AC-T-CG-TCCCAACTTGT---TG--GAGCTAT-TTTCGCAGGGATTCCATGCGCTGCTGCCAAGGATACTCGT
droEug1 scf7180000405417:1088-1212 - TGGGGGATATACCGCCCCTACTCGGTCGCCAGGGCCCCGTTT-CCAGAGTGCACCGCCGCGGCGGAGGGGTTGGACTATGGTCGGGTCCATGACCTTG-TGCACCGCTCCTACGATC-T-CGC-CCGCCC---------------------------------------------------------
droTak1 scf7180000412529:355-528 + TGGAAGCTATACCGCTCCTGCTCGGTCGCCAGAGCCCCAATTT--GCGGTGTGCCGCCTAGGCGGTGGGGTTGCCTGTTAGTCCGCTCCTTGACCTTTTAACACCTATTTTC-CC-TTTG-TGCAAACCGT-----GTCGGTGG---TTCCGACCAGATTCCGAATCCTTTAGTCAAGGATTTGGAG
droEle1 scf7180000486764:6196-6366 + TGGTATTTATACCGCTCCTGCTCGGTTCCCATTGCCCCATTT---TTGGTGTGCCGCCTTGGCGTTGGGGTTGGCTGATAGTCCGTTCCGTGACCTTT-AACATCTATTTTC-CC-C-AG-TGCTCACCAT-----GACGTGGT---TTTCGTCGGAGTTCCAGGTCCTCCTGCCAAGCTGTTGCAG
droKik1 scf7180000301685:14087-14260 + TGGGAGTTATACCGCTCCTGCTCGGTCGCCAGAGCCCCGTTTA--AGGGTGTACCGCAG-AGCGGCGGTGTTGGCTGTTGGTCCGCTCCTTGACCTTT-ACCACCTATTTTATCC-C-C-GTG-CGGTCCGTATTTT--GGGGTTTTTTTC---CCGAATCCGTTGCCTCCTGCCAAGGATTTGGGG
droAna3 scaffold_9226:9241-9370 - TGGGGGATATACCGCCCCTGCTCGGTCACCAGAGCCCCGTTTTCCAGCGTGCACCGCCGCGGCGGGGGGGTTGGAAATCGGTCCGATCCATGACCTTG-TGCACTGTTCCTT--------------------ATCTT--GAGGTTC-TGTTCCT---------------------------------
droBip1 scf7180000395863:23358-23482 + TGGGGGATATACCGCCCCTACTCGGTCGCCAGAGCCCCGTTA-CCATGGTGCACCGCCGCGGCGGAGGGGTTGGACAATGGTCGGATCCATGACCTTG-TGCACTGCTCCTAGGATT-C-CGC-CCGCTC---------------------------------------------------------
droVir3 scaffold_12970:637851-637962 - TGGGAGTTATACCGCTCCGACTCGGTCACCAGAGCCCCGTTTT--TATGGGCACCGCCGCGGCGG-GGGGTTGGAAATTGGTCTGTTCCGCGACCTTT-TGCTCCTTTTTTGCAC-T----------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
TGGAAGGTATACCTCTCCAGCTCGGTCGCCAGAGCCCCGGAT-TTTAAGTGTGACGCATCTGTGGAGG-------TATTGGTCTGCTCCTTGGCTTTT-TACACTCTTTTTCTGC-T-T-CTC-CTGCTCGT---TT--GTGGTCC-TGTCTCTGTGTTTCCATG-----TTGCCCAGAATACCAGTSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
.............................................................................................................................TGCTCGT---TT--GTGGTCC-TGTCTCTGT...............................25145.00450001002641967
....AGGTATACCTCTCCAGCTCGGTCGC..............................................................................................................................................................25137.00370008002040320
.................................................................................................T-TACACTCTTTTTCTGC-T-T-CTC-C..............................................................23127.00270000001052523
................................................................................................................................TCGT---TT--GTGGTCC-TGTCTCTGTGTT............................25125.00250000000221407
....AGGTATACCTCTCCAGCTCGGTCGCC.............................................................................................................................................................26125.00251005004040011
.................................................................................................T-TACACTCTTTTTCTGC-T-T-CTC-CTG............................................................25124.0024100500750132
.........................................T-TTTAAGTGTGACGCATCTGTGGAGG-------TA..............................................................................................................28122.00220000000215140
................................................................................................................................TCGT---TT--GTGGTCC-TGTCTCTGTGT.............................24121.00210000000313212
.................................................................................................T-TACACTCTTTTTCTGC-T-T-CTC-CTGC...........................................................26118.0018000000342540
.................................................................................................T-TACACTCTTTTTCTGC-T-T-CTC-CT.............................................................24114.0014100001012621
....AGGTATACCTCTCCAGCTCGGTCG...............................................................................................................................................................24114.00141000002010010
.............................................................................................................................TGCTCGT---TT--GTGGTCC-TGTCTCTG................................24113.0013000000111352
.............................................................................................................................TGCTCGT---TT--GTGGTCC-TGTCTCTGTG..............................26113.0013000000220522
.............................................................................................................................TGCTCGT---TT--GTGGTCC-TGTCTCTGTGTT............................28110.0010000000034120
...........................................TTTAAGTGTGACGCATCTGTGGAGG-------TA..............................................................................................................27110.0010000000016210
.............................................................................................................................TGCTCGT---TT--GTGGTCC-TGTCTCTGTGT.............................2719.009000000114201
.............................................................................................................................TGCTCGT---TT--GTGGTCC-TGTCTCT.................................2319.009000000010611
.........................................T-TTTAAGTGTGACGCATCTGTGGAGG-------................................................................................................................2618.008000100013210
............................................TTAAGTGTGACGCATCTGTGGAGG-------TA..............................................................................................................2617.007000000004021
.............................................TAAGTGTGACGCATCTGTGGAGG-------TA..............................................................................................................2517.007000000015001
................................................................................................................................TCGT---TT--GTGGTCC-TGTCTCTGT...............................2216.006000000000213
.................................................................................................................................CGT---TT--GTGGTCC-TGTCTCTGTGTT............................2415.005000000011210
....AGGTATACCTCTCCAGCTCGGTCGCCAGA..........................................................................................................................................................2915.005000000014000
....AGGTATACCTCTCCAGCTCGGT.................................................................................................................................................................2214.004000000001012
...............................................................................................................................................TCC-TGTCTCTGTGTTTCCATG-----TTGCCCA..........2814.004000100001020
...........................................TTTAAGTGTGACGCATCTGTGGAGG-------................................................................................................................2514.004000000003010
...................................................................................................................................T---TT--GTGGTCC-TGTCTCTGTGTTTC..........................2414.004000000001210
.........................................T-TTTAAGTGTGACGCATCTGTGGA.........................................................................................................................2414.004000000012010
...............TCCAGCTCGGTCGCCAGAGCCCCGGA..................................................................................................................................................2633.6711000000031421
.................................................................................................T-TACACTCTTTTTCTGC-T-T-CTC-CTGCT..........................................................2713.003000000030000
.............................................................................................................................TGCTCGT---TT--GTGGTCC-TGTCTC..................................2213.003000000002100
.......................................................................................................................................TT--GTGGTCC-TGTCTCTGTGTTTCC.........................2413.003000000001011
................................................................................................................................TCGT---TT--GTGGTCC-TGTCTCTGTGTTT...........................2613.003000000000201
................................................................................................................................TCGT---TT--GTGGTCC-TGTCTCTGTG..............................2313.003000000000003
....AGGTATACCTCTCCAGCTCGGTCGCCAG...........................................................................................................................................................2813.003000000100002
...............TCCAGCTCGGTCGCCAGAGCCCCGG...................................................................................................................................................2532.337000000001015
....AGGTATACCTCTCCAGCTCGGTCGCCA............................................................................................................................................................2712.002000000100001
.........................................T-TTTAAGTGTGACGCATCTGTGGAGG-------T...............................................................................................................2712.002000000001010
............................................................TGTGGAGG-------TATTGGTCTGCTCC..................................................................................................2212.002000000000002
.................................................................................................................................CGT---TT--GTGGTCC-TGTCTCTGTGTTTC..........................2612.002000000000101
.....................................CGGAT-TTTAAGTGTGACGCATCTGT............................................................................................................................2512.002000000001010
.................................................................................................................................CGT---TT--GTGGTCC-TGTCTCTGTGT.............................2312.002000000000101
.......................................................................................................................................TT--GTGGTCC-TGTCTCTGTGTTTCCA........................2512.002000200000000
.................................GCCCCGGAT-TTTAAGTGTGACGCATC...............................................................................................................................2612.002000000000011
............................................................TGTGGAGG-------TATTGGTCTGCTC...................................................................................................2112.002000000000002
.................................................................................................................................CGT---TT--GTGGTCC-TGTCTCTGTGTTT...........................2512.002000000011000
...................................................................................................TACACTCTTTTTCTGC-T-T-CTC-C..............................................................2212.002000000200000
........................................................................................................................................T--GTGGTCC-TGTCTCTGTGTTTCC.........................2312.002000000000011
.....................................................ACGCATCTGTGGAGG-------TATTGGTCTGC.....................................................................................................2612.002000000000002
...................................................................................................................................T---TT--GTGGTCC-TGTCTCTGTGTT............................2212.002000000001001
...AAGGTATACCTCTCCAGCTCGGTCG...............................................................................................................................................................2512.002000000001100
...........................................TTTAAGTGTGACGCATCTGTGGAGG-------T...............................................................................................................2612.002000000002000
..................AGCTCGGTCGCCAGAGCCCCGGA..................................................................................................................................................2351.407000000020500
.................CAGCTCGGTCGCCAGAGCCCCGGA..................................................................................................................................................2451.206000000010410
........................................................................................................................................T--GTGGTCC-TGTCTCTGTGT.............................1911.001000000000001
...................................................................................................................................................TGTCTCTGTGTTTCCATG-----TTGC.............2211.001000000000001
...................................................TGACGCATCTGTGGAGG-------TATTGGT.........................................................................................................2411.001100000000000
....AGGTATACCTCTCCAGCTCGG..................................................................................................................................................................2111.001000000000001
.......................................................................................................................................TT--GTGGTCC-TGTCTCTGTGTTTCCATG-----.................2711.001000100000000
.............................................TAAGTGTGACGCATCTGTGGAGG-------T...............................................................................................................2411.001000000001000
............................................TTAAGTGTGACGCATCTGTGGAGG-------T...............................................................................................................2511.001000000001000
.............................................TAAGTGTGACGCATCTGTGG..........................................................................................................................2011.001000000000001
......................................................CGCATCTGTGGAGG-------T...............................................................................................................1511.001000000000001
............................................................TGTGGAGG-------TATTGGTCT.......................................................................................................1711.001000000000001
.................................................................................................T-TACACTCTTTTTCTGC-T-T-CTC-...............................................................2211.001000000000001
.................................................................................................T-TACACTCTTTTTCTGC-T-T-...................................................................1911.001000001000000
...................................................................................................................................................TGTCTCTGTGTTTCCATG-----TTGCCCA..........2511.001000000000001
.......................................................................................................CTCTTTTTCTGC-T-T-CTC-CT.............................................................1911.001000000000001
.........................................T-TTTAAGTGTGACGCATCTGT............................................................................................................................2111.001000000000001
............................................................TGTGGAGG-------TATTGGTCTGCTCCT.................................................................................................2311.001000000000001
.................................................................AGG-------TATTGGTCTGCTCCTTG...............................................................................................2011.001000000000001
..................................................GTGACGCATCTGTGGAGG-------TATTGGTC........................................................................................................2611.001000000000001
..................................CCCCGGAT-TTTAAGTGTGACGCAT................................................................................................................................2411.001000000001000
............................................................................................................................................TGGTCC-TGTCTCTGTGTTTCCATG-----T................2511.001000000001000
.........................................................ATCTGTGGAGG-------TATTGGTCTGCTCC..................................................................................................2511.001000000000001
...................................CCCGGAT-TTTAAGTGTGACGCATCTGT............................................................................................................................2711.001000000001000
...AAGGTATACCTCTCCAGCTCGGTCGCC.............................................................................................................................................................2711.001000000001000
...........................................................................................................................................................TGTTTCCATG-----TTGCCCAGAATACCAG.2611.001000000001000
....AGGTATACCTCTCCAGCTCGGTC................................................................................................................................................................2311.001000000000001
.........................................................ATCTGTGGAGG-------TATTGGTCTG......................................................................................................2111.001000000000100
.............................................TAAGTGTGACGCATCTGTGGAGG-------TATT............................................................................................................2711.001000000000010
................................................................................................................................................CC-TGTCTCTGTGTTTCCATG-----TTGCC............2511.001000000000001
..................AGCTCGGTCGCCAGAGCCCCGGAT-T...............................................................................................................................................2551.005000000010211
..........................................................TCTGTGGAGG-------TATTGGTCTGCTCC..................................................................................................2411.001000000100000
.............................................................................................................................TGCTCGT---TT--GTGGTCC-TGTCT...................................2111.001000000000001
....................................................GACGCATCTGTGGAGG-------TATTGGTCTGC.....................................................................................................2711.001000000001000
.........................................T-TTTAAGTGTGACGCATCTGTGGAG........................................................................................................................2511.001000000001000
...................................................................................................................................T---TT--GTGGTCC-TGTCTCTGTGT.............................2111.001000000000001
............................................................................................................................................TGGTCC-TGTCTCTGTGTTTCCATG-----TTG..............2711.001000000001000
.................................GCCCCGGAT-TTTAAGTGTGACGCATCTGT............................................................................................................................2911.001000000001000
................................AGCCCCGGAT-TTTAAGTGTGACGCAT................................................................................................................................2611.001000000000010
.............................................TAAGTGTGACGCATCTGTGGAGG-------TAT.............................................................................................................2611.001000000000001
............................................................................................................................................TGGTCC-TGTCTCTGTGTTTCCATG-----TTGC.............2811.001000000001000
................................................................................................................................TCGT---TT--GTGGTCC-TGTCTCTGTGTTTC..........................2711.001000000000100
................................................................................................................................................CC-TGTCTCTGTGTTTCCATG-----TTGCCCA..........2711.001000000001000
..................................................................................................................................GT---TT--GTGGTCC-TGTCTCTGTGTT............................2311.001000000001000
...................................................................................................................................................TGTCTCTGTGTTTCCATG-----.................1811.001000000000001
.........................................................ATCTGTGGAGG-------TATTGGTCTGC.....................................................................................................2211.001000000000001
.........................................................ATCTGTGGAGG-------TATTGGTCTGCTCCT.................................................................................................2611.001000000000001
.......................................................................................................................................TT--GTGGTCC-TGTCTCTGTG..............................1911.001000000010000
.................................................TGTGACGCATCTGTGGAGG-------TATTGGTC........................................................................................................2711.001000000001000
........................................AT-TTTAAGTGTGACGCATCTGTGGAGG-------TA..............................................................................................................2911.001000000000010
.................................................................................................T-TACACTCTTTTTCTGC-T-.....................................................................1811.001000010000000
.............................................................................................................................................GGTCC-TGTCTCTGTGT.............................1611.001000000000001
...........................................TTTAAGTGTGACGCATCTGTGGAG........................................................................................................................2411.001000000001000
.........................................................................................................CTTTTTCTGC-T-T-CTC-CT.............................................................1720.501000000000001
.............................................................................................................TTCTGC-T-T-CTC-CTGCTCG........................................................1820.501000000000001
................CCAGCTCGGTCGCCAGAGCCCCGGA..................................................................................................................................................2530.331000000010000
................CCAGCTCGGTCGCCAGAGCCCCGGAT-................................................................................................................................................2630.331000000001000
.........................................................................................................CTTTTTCTGC-T-T-CTC-C..............................................................1630.331000000000001
..................AGCTCGGTCGCCAGAGC........................................................................................................................................................17140.213000000000003
...........................................................................TATTGGTCTGCTCCTTG...............................................................................................17190.214000000000004
..................AGCTCGGTCGCCAGAGCCCCGG...................................................................................................................................................2250.201000000010000
.......................GGTCGCCAGAGCCCCGGA..................................................................................................................................................1860.171000000000001
.................CAGCTCGGTCGCCAGA..........................................................................................................................................................16160.132000000000101
................CCAGCTCGGTCGCCAGAGCCCCG....................................................................................................................................................23100.101000000000001
...............TCCAGCTCGGTCGCCAGAG.........................................................................................................................................................19120.081000000000001
..................AGCTCGGTCGCCAGAGCCCCG....................................................................................................................................................21120.081000000000001
..................AGCTCGGTCGCCAGAGCCCC.....................................................................................................................................................20120.081000000000001
..............CTCCAGCTCGGTCGCCAG...........................................................................................................................................................18130.081000000000001
...............TCCAGCTCGGTCGCCAGA..........................................................................................................................................................18140.071000000000010
.....................TCGGTCGCCAGAGCC.......................................................................................................................................................15140.071000000010000
..................AGCTCGGTCGCCAGA..........................................................................................................................................................15160.061000000010000
.................CAGCTCGGTCGCCAG...........................................................................................................................................................15170.061000000000001
...........................................................................TATTGGTCTGCTCCT.................................................................................................15190.051000000000001
............................................................................ATTGGTCTGCTCCTTG...............................................................................................16200.051000000000001
droSec2
TGGGAGTTATAATGATCCAGCTCGGTCGCCAGAGCCCCGTAT-TTAAAGTGTGACGCCTAAGCTG-GGGGTTGGCTATTGGTCTGCTCCTTGACTTTT-TACACTCTAGTTCTGC-T-T-CTC-CTGCTCGT---TT--GTGGTGC---TCTCTTAGTTTCCAAG-----TTGCCCAAAATACCAGTSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
...............................................................................................TTT-TACACTCTAGTTCTGC-T-T-CTC-C..............................................................2516.0060105
.................................................................................................T-TACACTCTAGTTCTGC-T-T-CTC-C..............................................................2315.0050104
.................................................................................................T-TACACTCTAGTTCTGC-T-T-CTC-CT.............................................................2414.0040103
.............................................................................................................................TGCTCGT---TT--GTGGTGC---TCTCTTAGT.............................2513.0030102
...............................................................................................TTT-TACACTCTAGTTCTGC-T-T-CTC-...............................................................2413.0030003
.................................................................................................T-TACACTCTAGTTCTGC-T-T-CTC-CTG............................................................2512.0020002
................................................................................................TT-TACACTCTAGTTCTGC-T-T-...................................................................2011.0010001
.............................................................................................................................TGCTCGT---TT--GTGGTGC---TCTCTTAG..............................2411.0010100
...........................................TTAAAGTGTGACGCCTAAGCTG-G........................................................................................................................2311.0010100
.................................................................................................T-TACACTCTAGTTCTGC-T-T-CTC-CTGC...........................................................2611.0010001
.......................................................................................................................................TT--GTGGTGC---TCTCTTAGTTTCCAAG-----T................2611.0010001
.........................................................................................................................................................TTAGTTTCCAAG-----TTGCCCAAAATAC....2511.0010001
.............................................................................................................................TGCTCGT---TT--GTGGTGC---TCTCTTAGTT............................2611.0010001
.................................................................................................T-TACACTCTAGTTCTGC-T-T-CTC-...............................................................2211.0010001
.......................................................................TGGCTATTGGTCTGCTCCTTGACT............................................................................................24200.601201011
.......................................................................TGGCTATTGGTCTGCTCCTTGACTT...........................................................................................25200.4080008
.......................................................................TGGCTATTGGTCTGCTCCTTGACTTT..........................................................................................26200.2550005
......................................................................TTGGCTATTGGTCTGCTCCTTGACT............................................................................................25200.2040004
.......................................................................TGGCTATTGGTCTGCTCCTTGA..............................................................................................22200.1020002
......................................................................TTGGCTATTGGTCTGCTCCTTGAC.............................................................................................24200.1020002
......................................................................TTGGCTATTGGTCTGCTCCTTGACTT...........................................................................................26200.1020002
.......................................................................TGGCTATTGGTCTGCTCCTTG...............................................................................................21200.1020101
.......................................................................TGGCTATTGGTCTGCTCCTTGAC.............................................................................................23200.1020002
...............TCCAGCTCGGTCGCCAGAGCCCCG....................................................................................................................................................24200.0510001
......................................................................TTGGCTATTGGTCTGCTCCTTG...............................................................................................22200.0510100
...............TCCAGCTCGGTCGCCAGAGC........................................................................................................................................................20200.0510100
........................................................................GGCTATTGGTCTGCTCCTTGACTTT..........................................................................................25200.0510001
......................................................................TTGGCTATTGGTCTGCTCCTTGA..............................................................................................23200.0510001
...........................................................................TATTGGTCTGCTCCTTGACT............................................................................................20200.0510001
......................................................................TTGGCTATTGGTCTGCTCCTTGACTTT..........................................................................................27200.0510001
......................................................................TTGGCTATTGGTCTGCTCCT.................................................................................................20200.0510100
...........................................................................TATTGGTCTGCTCCTTGACTT...........................................................................................21200.0510001
......................................................................TTGGCTATTGGTCTGCTCCTT................................................................................................21200.0510001
droEre2
TGGGAGTTATACCGCTCCAGCTCGGTCGCCAGTGCCCCTGATT--TAGGTGTACCGCGTGAGCGGTGGGGTTGGCTATTGGTCTGCTCCTTGACCTTT-AACACCTTTAATT-AC-T-AG-CCCGAGCCTTT---TG--GGTCTAT-TTTCGCTGTGATTCCATGAGTTGTCGTCAAA-ATTCTCATSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
...........................................................................................................................................................TGATTCCATGAGTTGTCGTCAAA-ATTC....2711.001000010
....................................................................................................................................................TTCGCTGTGATTCCATGAGTTGTCG..............2520.501001000
...................................................................................................................................T---TG--GGTCTAT-TTTCGCTGTGATTCCATG......................2820.501000010
...........................................................................................................................CGAGCCTTT---TG--GGTCTAT-TTTCGCTG................................2620.501000010
....................................................................................................................................................TTCGCTGTGATTCCATGAGT...................2030.331001000
.......TATACCGCTCCAGCTCGGTCGCCAG...........................................................................................................................................................25120.253000030
................................TGCCCCTGATT--TAGGTGTACCGCGTG...............................................................................................................................2640.251000010
.......................................................................TGGCTATTGGTCTGCTCCTTGACCTT..........................................................................................26140.142000020
......................................TGATT--TAGGTGTACCGCGTGAGCG...........................................................................................................................2470.141001000
..................................................GTACCGCGTGAGCGGTGGGGTTG..................................................................................................................2370.141000010
......................................................................TTGGCTATTGGTCTGCTCCTTGACCT...........................................................................................26140.142000020
......................................................................TTGGCTATTGGTCTGCTCCTTGACCTT..........................................................................................27140.142000020
.................................................TGTACCGCGTGAGCGGTGGG......................................................................................................................20110.091000010
.......TATACCGCTCCAGCTCGGTCGCCAGT..........................................................................................................................................................26120.081000010
......TTATACCGCTCCAGCTCGGTCGCCAG...........................................................................................................................................................26120.081000100
TGGGAGTTATACCGCTCCAGCTCGG..................................................................................................................................................................25130.081000010
TGGGAGTTATACCGCTCCAGCTCGGT.................................................................................................................................................................26130.081000010
.........TACCGCTCCAGCTCGGTCGCC.............................................................................................................................................................21140.071000010
.......................................................................TGGCTATTGGTCTGCTCCTTGACC............................................................................................24140.071000010
.......................................................................TGGCTATTGGTCTGCTCCTTGACCT...........................................................................................25140.071000010
......................................................................TTGGCTATTGGTCTGCTCCTTGACC............................................................................................25140.071000010
.........................................................................GCTATTGGTCTGCTCCTTGACCT...........................................................................................23170.061000010
......................................................................TTGGCTATTGGTCTGCTCCTTGAC.............................................................................................24200.051000010
.............................................................GCGGTGGGGTTGGCTATTGGTCTG......................................................................................................24200.051000010
.......................................................................TGGCTATTGGTCTGCTCCTTGAC.............................................................................................23200.051000010
...............................................................GGTGGGGTTGGCTATTGGTCTGCTC...................................................................................................25200.051000010
droYak3
TGGGAGTTATACCGCTCCTGCTCGGTCGCCAGAGCCCCGTTTT--TCGGTGTACCGCGTAAGCGGCGGGTTTGGCTGTTAGTCGGCTCCTTGACCTTC-GACACCTATATTT-AC-T-CG-TCCCAACTTGT---TG--GAGCTAT-TTTCGCAGGGATTCCATGCGCTGCTGCCAAGGATACTCGTSizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
................................................................................................TC-GACACCTATATTT-AC-T-CG-TCCCAAC...........................................................2715.0050000050
................................................................................................TC-GACACCTATATTT-AC-T-CG-TCCCAACT..........................................................2812.0020000020
......TTATACCGCTCCTGCTCGGTCGCCA............................................................................................................................................................2571.1480000080
...............................................................................................................................................................TCCATGCGCTGCTGCCAAGGATACTC..2611.0010000010
................................................................................................................................TTGT---TG--GAGCTAT-TTTCGCAGGGAT............................2511.0010010000
..........................................................................................TGACCTTC-GACACCTATATTT-AC-T-CG-..................................................................2611.0010000010
...........................................................................................................................................................GGATTCCATGCGCTGCTGCCAAG.........2311.0010000010
................................................................................................TC-GACACCTATATTT-AC-T-CG-TCCCAACTT.........................................................2911.0010000010
.........................................TT--TCGGTGTACCGCGTAAGCGGCG........................................................................................................................2431.0030000030
.........................................................................................................TATATTT-AC-T-CG-TCCCAACTTGT---TG--GAGC............................................2911.0010000001
.....................................................................TTTGGCTGTTAGTCGGCTCCTTGACCT...........................................................................................2711.0010000010
..........................................T--TCGGTGTACCGCGTAAGCGGCGGGT.....................................................................................................................2611.0010000010
...........................................................................................................................................................GGATTCCATGCGCTGCTGCCAAGGAT......2611.0010000010
.......................................TTTT--TCGGTGTACCGCGTAAGCGGCG........................................................................................................................2630.6720000020
......TTATACCGCTCCTGCTCGGTCGCCAG...........................................................................................................................................................2660.6740000040
.............................................TCGGTGTACCGCGTAAGCGGCGGG......................................................................................................................2430.6720000020
......................................................................TTGGCTGTTAGTCGGCTCCTTGACCT...........................................................................................2620.5010000010
......TTATACCGCTCCTGCTCGGTCGCC.............................................................................................................................................................2470.4330000021
........................................TTT--TCGGTGTACCGCGTAAGCGGC.........................................................................................................................2430.3310000010
....................................CCGTTTT--TCGGTGTACCGCGTAAGC............................................................................................................................2530.3310000010
.........................................TT--TCGGTGTACCGCGTAAGCGGCGGG......................................................................................................................2630.3310000010
..........................................T--TCGGTGTACCGCGTAAGCGGCG........................................................................................................................2330.3310010000
........................................TTT--TCGGTGTACCGCGTAAGCGGCG........................................................................................................................2530.3310000010
........................................TTT--TCGGTGTACCGCGTAAGCGGCGG.......................................................................................................................2630.3310000010
.....................TCGGTCGCCAGAGCCCCGTTTT--TCGGTG........................................................................................................................................2840.2510000010
...............................GAGCCCCGTTTT--TCGGTGTACCGCG.................................................................................................................................2540.2510000010
.........TACCGCTCCTGCTCGGTCGCCAGAGC........................................................................................................................................................2660.1710000010
................CCTGCTCGGTCGCCAGAGCCCCGT...................................................................................................................................................2460.1710000010
.......TATACCGCTCCTGCTCGGTCGCCAGAG.........................................................................................................................................................2760.1710000010
..............CTCCTGCTCGGTCGCCAGAGCCCCGTTT.................................................................................................................................................2860.1710000010
.......TATACCGCTCCTGCTCGGTCGCCAGAGC........................................................................................................................................................2860.1710000010
..........ACCGCTCCTGCTCGGTCGCCAGAGCCC......................................................................................................................................................2760.1710000001
.......TATACCGCTCCTGCTCGGTCGCCAGA..........................................................................................................................................................2660.1710000010
.......TATACCGCTCCTGCTCGGTCGCCAG...........................................................................................................................................................2560.1710000010
.......TATACCGCTCCTGCTCGGTCGCCA............................................................................................................................................................2470.1410000010
......TTATACCGCTCCTGCTCGGTCG...............................................................................................................................................................2280.1310000010
TGGGAGTTATACCGCTCCTGCTCGGT.................................................................................................................................................................2690.1110000010
droEug1
TGGGGGATATACCGCCCCTACTCGGTCGCCAGGGCCCCGTTT-CCAGAGTGCACCGCCGCGGCGGAGGGGTTGGACTATGGTCGGGTCCATGACCTTG-TGCACCGCTCCTACGATC-T-CGC-CCGCCC---------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TGGAAGCTATACCGCTCCTGCTCGGTCGCCAGAGCCCCAATTT--GCGGTGTGCCGCCTAGGCGGTGGGGTTGCCTGTTAGTCCGCTCCTTGACCTTTTAACACCTATTTTC-CC-TTTG-TGCAAACCGT-----GTCGGTGG---TTCCGACCAGATTCCGAATCCTTTAGTCAAGGATTTGGAGSizeHit CountTotal NormTotal
No Reads
droEle1
TGGTATTTATACCGCTCCTGCTCGGTTCCCATTGCCCCATTT---TTGGTGTGCCGCCTTGGCGTTGGGGTTGGCTGATAGTCCGTTCCGTGACCTTT-AACATCTATTTTC-CC-C-AG-TGCTCACCAT-----GACGTGGT---TTTCGTCGGAGTTCCAGGTCCTCCTGCCAAGCTGTTGCAGSizeHit CountTotal NormTotal
No Reads
droKik1
TGGGAGTTATACCGCTCCTGCTCGGTCGCCAGAGCCCCGTTTA--AGGGTGTACCGCAG-AGCGGCGGTGTTGGCTGTTGGTCCGCTCCTTGACCTTT-ACCACCTATTTTATCC-C-C-GTG-CGGTCCGTATTTT--GGGGTTTTTTTC---CCGAATCCGTTGCCTCCTGCCAAGGATTTGGGGSizeHit CountTotal NormTotal
No Reads
droAna3
TGGGGGATATACCGCCCCTGCTCGGTCACCAGAGCCCCGTTTTCCAGCGTGCACCGCCGCGGCGGGGGGGTTGGAAATCGGTCCGATCCATGACCTTG-TGCACTGTTCCTT--------------------ATCTT--GAGGTTC-TGTTCCT---------------------------------SizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
..........................................TCCAGCGTGCACCGCCGCGGCGG..........................................................................................................................23120.506000024
..........................................TCCAGCGTGCACCGCCGCGGCGGGG........................................................................................................................25120.506000330
......................................GTTTTCCAGCGTGCACCGCCGCGGC............................................................................................................................25140.365000023
..........................CACCAGAGCCCCGTTTTCCAGCGTGC.......................................................................................................................................26150.335000113
.........................TCACCAGAGCCCCGTTTTCCAGCGTG........................................................................................................................................26150.335000320
.........TACCGCCCCTGCTCGGTCACCAGAGC........................................................................................................................................................26160.315000032
.....................................CGTTTTCCAGCGTGCACCGCCGCGGC............................................................................................................................26130.314000022
..........................................TCCAGCGTGCACCGCCGCGGCGGGGG.......................................................................................................................26120.253000102
.........TACCGCCCCTGCTCGGTCACCAGA..........................................................................................................................................................24170.183000120
.................................................................................TCCGATCCATGACCTTG-TGCACTGT................................................................................25120.172000002
.........................................TTCCAGCGTGCACCGCCGCGGCGG..........................................................................................................................24120.172000002
.......................................TTTTCCAGCGTGCACCGCCGCGGCGGGG........................................................................................................................28120.172000002
....................................CCGTTTTCCAGCGTGCACCGCCGCGG.............................................................................................................................26130.152000011
......................................GTTTTCCAGCGTGCACCGCCGCGGCG...........................................................................................................................26130.152000011
............................................................................ATCGGTCCGATCCATGACCTTG-TGCAC...................................................................................27140.142000011
..........................................TCCAGCGTGCACCGCCGCGGC............................................................................................................................21140.142000002
.........................TCACCAGAGCCCCGTTTTCCAGC...........................................................................................................................................23150.132000020
.........................TCACCAGAGCCCCGTTTTCCAGCGT.........................................................................................................................................25150.132000002
.........................TCACCAGAGCCCCGTTTTCCAGCGTGC.......................................................................................................................................27150.132000002
.........TACCGCCCCTGCTCGGTCACCAGAGCC.......................................................................................................................................................27150.132000020
........................GTCACCAGAGCCCCGTTTTCCAGCGT.........................................................................................................................................26150.132000002
.......TATACCGCCCCTGCTCGGTCACCAGAGC........................................................................................................................................................28160.132000011
.........TACCGCCCCTGCTCGGTCACCAGAG.........................................................................................................................................................25160.132000020
.....................................................................GTTGGAAATCGGTCCGATCCATGACC............................................................................................26160.132000011
.....................TCGGTCACCAGAGCCCCGTTTTCC..............................................................................................................................................24160.132000002
.......................................................................TGGAAATCGGTCCGATCCATGACCTTG-T.......................................................................................28160.132000020
......................................................................TTGGAAATCGGTCCGATCCATGACC............................................................................................25160.132000002
.......TATACCGCCCCTGCTCGGTCACCAGA..........................................................................................................................................................26170.122000020
....................................................................................GATCCATGACCTTG-TGCACTGTTCCT............................................................................26100.101000010
......................................................................................TCCATGACCTTG-TGCACTGTTCC.............................................................................23100.101000001
...................................................................................CGATCCATGACCTTG-TGCACTGTTCC.............................................................................26100.101000001
....................................................................................GATCCATGACCTTG-TGCACTGTTCCTT--------------------.......................................................27100.101000010
.............................................AGCGTGCACCGCCGCGGCGGGGG.......................................................................................................................23120.081000010
.........................................TTCCAGCGTGCACCGCCGCGGCGGGG........................................................................................................................26120.081000001
.........................................TTCCAGCGTGCACCGCCGCGGCGGGGGG......................................................................................................................28120.081000010
.........................................TTCCAGCGTGCACCGCCGCGGCGGGGG.......................................................................................................................27120.081000001
..........................................TCCAGCGTGCACCGCCGCGGCGGG.........................................................................................................................24120.081000001
...........................................CCAGCGTGCACCGCCGCGGCGGGG........................................................................................................................24120.081000001
........................................TTTCCAGCGTGCACCGCCGCGGCGGGGG.......................................................................................................................28120.081000001
......................................GTTTTCCAGCGTGCACCGCCGCGGCGG..........................................................................................................................27120.081000001
.....................................CGTTTTCCAGCGTGCACCGCCGCGGCG...........................................................................................................................27120.081000010
.........................................TTCCAGCGTGCACCGCCGCGGCG...........................................................................................................................23130.081000010
..........................................TCCAGCGTGCACCGCCGCGGCG...........................................................................................................................22130.081000010
....................................CCGTTTTCCAGCGTGCACCGCCGC...............................................................................................................................24130.081000001
.................................................................................TCCGATCCATGACCTTG-TGCACTG.................................................................................24130.081000010
.....................................CGTTTTCCAGCGTGCACCGCCGC...............................................................................................................................23130.081000001
....................................CCGTTTTCCAGCGTGCACCGC..................................................................................................................................21130.081000010
............................................................................ATCGGTCCGATCCATGACCTTG-TGCACTG.................................................................................29130.081000010
.........................TCACCAGAGCCCCGTTTTCCAGCGTGCAC.....................................................................................................................................29130.081000001
.....................................CGTTTTCCAGCGTGCACCGCCGCGG.............................................................................................................................25130.081000010
..........................CACCAGAGCCCCGTTTTCCAGCGTGCACC....................................................................................................................................29130.081000010
...................................CCCGTTTTCCAGCGTGCACCGCCGCGGC............................................................................................................................28130.081000010
....................................CCGTTTTCCAGCGTGCACCGCCGCG..............................................................................................................................25130.081000001
.............................................................................TCGGTCCGATCCATGACCTTG-TGCACTG.................................................................................28130.081000001
.......................................TTTTCCAGCGTGCACCGCCGCGG.............................................................................................................................23140.071000010
.................................................................................TCCGATCCATGACCTTG-TGCAC...................................................................................22140.071000001
.............................................................................TCGGTCCGATCCATGACCTTG-TGCAC...................................................................................26140.071000001
...............................GAGCCCCGTTTTCCAGCGTGCAC.....................................................................................................................................23140.071000001
..................TGCTCGGTCACCAGAGCCCCGTTTTC...............................................................................................................................................26150.071000010
.....................TCGGTCACCAGAGCCCCGTTTTCCAGCG..........................................................................................................................................28150.071000001
.........................TCACCAGAGCCCCGTTTTCCAGCG..........................................................................................................................................24150.071000001
........................GTCACCAGAGCCCCGTTTTCCAGCGTGC.......................................................................................................................................28150.071000001
.........TACCGCCCCTGCTCGGTCACCAGAGCCC......................................................................................................................................................28150.071000001
...........................ACCAGAGCCCCGTTTTCCAGCGTGC.......................................................................................................................................25150.071000100
..........ACCGCCCCTGCTCGGTCACCAGAGCCCC.....................................................................................................................................................28150.071000010
.........TACCGCCCCTGCTCGGTCACCAGAGCCCC.....................................................................................................................................................29150.071000010
..................TGCTCGGTCACCAGAGCCCCGTTT.................................................................................................................................................24150.071100000
...............CCCTGCTCGGTCACCAGAGCCCCGTT..................................................................................................................................................26150.071000001
......................................................................TTGGAAATCGGTCCGATCCATGACCT...........................................................................................26160.061000001
...............CCCTGCTCGGTCACCAGAGCCCCGT...................................................................................................................................................25160.061000001
.......................................................................TGGAAATCGGTCCGATCCATGACC............................................................................................24160.061000001
.....................TCGGTCACCAGAGCCCCGTTTTCCAG............................................................................................................................................26160.061000001
....................CTCGGTCACCAGAGCCCCGTTTTC...............................................................................................................................................24160.061000001
.............................CAGAGCCCCGTTTTCCAGCGTGC.......................................................................................................................................23160.061000010
.......................GGTCACCAGAGCCCCGTTTTCC..............................................................................................................................................22160.061000010
...........CCGCCCCTGCTCGGTCACCAGAGC........................................................................................................................................................24160.061000010
.......TATACCGCCCCTGCTCGGTCACCAGAG.........................................................................................................................................................27160.061000010
....................CTCGGTCACCAGAGCCCCGTTTTCCA.............................................................................................................................................26160.061000010
.........TACCGCCCCTGCTCGGTCACCAG...........................................................................................................................................................23170.061000010
.......TATACCGCCCCTGCTCGGTCACCAG...........................................................................................................................................................25170.061000010
.GGGGGATATACCGCCCCTGCTCGGTCAC..............................................................................................................................................................28180.061000010
.......TATACCGCCCCTGCTCGGTCACCA............................................................................................................................................................24180.061000010
.........TACCGCCCCTGCTCGGTCACCA............................................................................................................................................................22180.061000010
.........TACCGCCCCTGCTCGGTCAC..............................................................................................................................................................20190.051000010
droBip1
TGGGGGATATACCGCCCCTACTCGGTCGCCAGAGCCCCGTTA-CCATGGTGCACCGCCGCGGCGGAGGGGTTGGACAATGGTCGGATCCATGACCTTG-TGCACTGCTCCTAGGATT-C-CGC-CCGCTC---------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droVir3
TGGGAGTTATACCGCTCCGACTCGGTCACCAGAGCCCCGTTTT--TATGGGCACCGCCGCGGCGG-GGGGTTGGAAATTGGTCTGTTCCGCGACCTTT-TGCTCCTTTTTTGCAC-T----------------------------------------------------------------------SizeHit CountTotal NormTotalV116
Male-body		V053
Head		V047
Embryo		M027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis
.............................................................................TTGGTCTGTTCCGCGACCTTT-TGCTCC..................................................................................271864.39115900020413117130701000310000000001660921991150000310816411950
.............................................................................TTGGTCTGTTCCGCGACCTTT-TGCTC...................................................................................261827.114880000017210914000002000000000014322910455000011011123550
.............................................................................TTGGTCTGTTCCGCGACCTTT-TGCT....................................................................................251826.394750000012031903040201300000000030503088500000801017159130
.............................................................................TTGGTCTGTTCCGCGACCTTT-TGCTCCT.................................................................................28189.22166000102734010000040000000000310184526000040137360
.............................................................................TTGGTCTGTTCCGCGACCTTT-TGC.....................................................................................24186.5011700000727001000000100000000005487000010118100
.............................................................................TTGGTCTGTTCCGCGACCTTT-TGCTCCTT................................................................................29173.6562000002901000000000000000000035118000010012100
...............TCCGACTCGGTCACCAGAGCCCCGTTT.................................................................................................................................................27182.564600000400000002000000000000031110000106323100
...............TCCGACTCGGTCACCAGAGCCCCGT...................................................................................................................................................25181.833300000000000100000000000000002000000102122310
..............................................................................TGGTCTGTTCCGCGACCTTT-TGCTCC..................................................................................26181.673000000300000000000000000000000000000000000000
.............................................................................TTGGTCTGTTCCGCGACCTTT-TG......................................................................................23181.172100000150000000000000000000000012000000101100
...............TCCGACTCGGTCACCAGAGCCCCGTT..................................................................................................................................................26180.94170000020001000000000000000000100000000219010
.......................................................................TGGAAATTGGTCTGTTCCGCGACC............................................................................................24170.94160000051003000000000000000010050000000000100
..............................................................................TGGTCTGTTCCGCGACCTTT-TGCTC...................................................................................25180.721300000130000000000000000000000000000000000000
...................................................................................TGTTCCGCGACCTTT-TGCTCC..................................................................................21200.4080000020000000000000000000003030000000000000
...............TCCGACTCGGTCACCAGAGCCCCG....................................................................................................................................................24180.3970000030000000000000000000000010000000002010
.......................................................................TGGAAATTGGTCTGTTCCGCGACCTT..........................................................................................26170.3560000010101000000000000000000030000000000000
...............TCCGACTCGGTCACCAGAGCCCCGTTTT--..............................................................................................................................................28180.3360000010000000000000000000000000000000023000
.......................................................GCCGCGGCGG-GGGGTTGG.................................................................................................................1830.3310000010000000000000000000000000000000000000
.......................................................................TGGAAATTGGTCTGTTCCGCGAC.............................................................................................23180.3360000001004000000000000000000010000000000000
...............TCCGACTCGGTCACCAGAGCCC......................................................................................................................................................22180.3360000022000000200000000000000000000000000000
..............................................................................TGGTCTGTTCCGCGACCTTT-TGCT....................................................................................24180.2850000050000000000000000000000000000000000000
TGGGAGTTATACCGCTCCGACTCGG..................................................................................................................................................................25170.2440000030000000000000000000000000000000001000
TGGGAGTTATACCGCTCCGACTCGGTC................................................................................................................................................................27170.2440002020000000000000000000000000000000000000
.............................................................................TTGGTCTGTTCCGCGACCTTT-........................................................................................21180.2240000020000000000000000000001010000000000000
.............................................................................TTGGTCTGTTCCGCGACC............................................................................................18180.2240000000100000000000000000002010000000000000
...............TCCGACTCGGTCACCAGAGC........................................................................................................................................................20200.2040000020000000000000000000010000000000000010
...................................................................................TGTTCCGCGACCTTT-TGCT....................................................................................19200.2040000000000000000000000000002010000000010000
.......................................................................TGGAAATTGGTCTGTTCCGCGACCTTT-........................................................................................27170.1830000000000000000000000000010020000000000000
......................................................................TTGGAAATTGGTCTGTTCCGCGACCTT..........................................................................................27170.1830000010000000000000000000000020000000000000
.............................................................................TTGGTCTGTTCCGCGACCTTT-T.......................................................................................22180.1730000030000000000000000000000000000000000000
...............TCCGACTCGGTCACCAGAGCCCC.....................................................................................................................................................23180.1730000010000000000000000000000010000000001000
............................................................................ATTGGTCTGTTCCGCGACCTTT-TGCTCC..................................................................................28180.1730000011000000000000000000000000000000100000
..............................................................................TGGTCTGTTCCGCGACCTTT-TGCTCCT.................................................................................27180.1730000020000000000000000000000010000000000000
......................................................................TTGGAAATTGGTCTGTTCCGCGAC.............................................................................................24180.1730000010001010000000000000000000000000000000
.......TATACCGCTCCGACTCGGTCACCAGA..........................................................................................................................................................26200.1530000030000000000000000000000000000000000000
.....................................................................GTTGGAAATTGGTCTGTTCCGCGACC............................................................................................26160.1320000001000000000000000000000001000000000000
......TTATACCGCTCCGACTCGGTCACCA............................................................................................................................................................25170.1220000020000000000000000000000000000000000000
..............................................................................TGGTCTGTTCCGCGACCTTT-TGCTCCTT................................................................................28170.1220000020000000000000000000000000000000000000
......TTATACCGCTCCGACTCGGTCACCAGA..........................................................................................................................................................27170.1220000020000000000000000000000000000000000000
......................................................................TTGGAAATTGGTCTGTTCCGCGACC............................................................................................25170.1220000010000000000000000000010000000000000000
TGGGAGTTATACCGCTCCGACTCGGTCA...............................................................................................................................................................28170.1220000000000000000000000000000000000010000010
...............TCCGACTCGGTCACCAGAGCC.......................................................................................................................................................21180.1120000010000000100000000000000000000000000000
..............................................................................TGGTCTGTTCCGCGACCTTT-TGC.....................................................................................23180.1120000020000000000000000000000000000000000000
............................................................................ATTGGTCTGTTCCGCGACCTTT-TGC.....................................................................................25180.1120000020000000000000000000000000000000000000
.........TACCGCTCCGACTCGGTCACCAGAGC........................................................................................................................................................26200.1020000000001000000000000000000000000000010000
......TTATACCGCTCCGACTCGGTCACC.............................................................................................................................................................24170.0610000010000000000000000000000000000000000000
........................................................................GGAAATTGGTCTGTTCCGCGACC............................................................................................23170.0610000010000000000000000000000000000000000000
TGGGAGTTATACCGCTCCGACTCGGT.................................................................................................................................................................26170.0610000000000000000000000000000000000000000010
.......................................................................TGGAAATTGGTCTGTTCCGCGACCT...........................................................................................25170.0610000000000000000000000000000000000010000000
.GGGAGTTATACCGCTCCGACTCGGTC................................................................................................................................................................26170.0610000010000000000000000000000000000000000000
................................................................................GTCTGTTCCGCGACCTTT-TGCTCCTTT...............................................................................27170.0610000010000000000000000000000000000000000000
.......TATACCGCTCCGACTCGGTCACCAGAGCC.......................................................................................................................................................29170.0610001000000000000000000000000000000000000000
......................................................................TTGGAAATTGGTCTGTTCCGCGACCT...........................................................................................26170.0610000000000000100000000000000000000000000000
................................................................................GTCTGTTCCGCGACCTTT-TGCTCCTT................................................................................26170.0610000010000000000000000000000000000000000000
.................CGACTCGGTCACCAGAGCCCCGT...................................................................................................................................................23180.0610000000000000000000000000000000100000000000
................CCGACTCGGTCACCAGAGCCCCGTTTT--..............................................................................................................................................27180.0610000000000000000000000000000000000000001000
.............................................................................TTGGTCTGTTCCGCGACCTT..........................................................................................20180.0610000000000000000000000000001000000000000000
......................CGGTCACCAGAGCCCCGTTTT--TATGGGC.......................................................................................................................................28180.0610000010000000000000000000000000000000000000
..............................................................................TGGTCTGTTCCGCGACCTTT-TG......................................................................................22180.0610000010000000000000000000000000000000000000
..................GACTCGGTCACCAGAGCCCCGTTTT--..............................................................................................................................................25180.0610000000000000000000000000000100000000000000
..................GACTCGGTCACCAGAGCCCCGTTT.................................................................................................................................................24180.0610000000000000000000000000000000000000000010
.........................TCACCAGAGCCCCGTTTT--TATGGGCACC....................................................................................................................................28180.0610000001000000000000000000000000000000000000
............................................................................ATTGGTCTGTTCCGCGACCTTT-TGCTC...................................................................................27180.0610000010000000000000000000000000000000000000
............................................................................ATTGGTCTGTTCCGCGACCTTT-TGCTCCT.................................................................................29180.0610000000000000000000000000000100000000000000
...................ACTCGGTCACCAGAGCCCCGT...................................................................................................................................................21180.0610000000000010000000000000000000000000000000
................CCGACTCGGTCACCAGAGCCCCGTTT.................................................................................................................................................26180.0610000000000000001000000000000000000000000000
...............................................................................GGTCTGTTCCGCGACCTTT-TGCTCC..................................................................................25180.0610000010000000000000000000000000000000000000
..............CTCCGACTCGGTCACCAGAGCCCCGT...................................................................................................................................................26180.0610000010000000000000000000000000000000000000
.....................TCGGTCACCAGAGCCCCGTTTT--TATG..........................................................................................................................................26180.0610000010000000000000000000000000000000000000
...................ACTCGGTCACCAGAGCCCCGTTTT--..............................................................................................................................................24180.0610000010000000000000000000000000000000000000
..............................AGAGCCCCGTTTT--TATGGGCA......................................................................................................................................21180.0610000000000000100000000000000000000000000000
......................................................................TTGGAAATTGGTCTGTTCCGCGA..............................................................................................23190.0510000000000000000000000000000010000000000000
.....................................................................................TTCCGCGACCTTT-TGCTC...................................................................................18200.0510000000000000000000000000000100000000000000
.................................................................................TCTGTTCCGCGACCTTT-TGC.....................................................................................20200.0510000000000000000000000000000000000000010000
.........TACCGCTCCGACTCGGTCACCAGAG.........................................................................................................................................................25200.0510000000000000000000000000001000000000000000
...............TCCGACTCGGTCACCAGAG.........................................................................................................................................................19200.0510000010000000000000000000000000000000000000
.......TATACCGCTCCGACTCGGTCACCAGAG.........................................................................................................................................................27200.0510000000000000000000000000000000000000000010
...................................................................................TGTTCCGCGACCTTT-TGCTC...................................................................................20200.0510000000000000000000000000001000000000000000
.......TATACCGCTCCGACTCGGTCACCAGAGC........................................................................................................................................................28200.0510000000000000000000000000000000000010000000
.................................................................................TCTGTTCCGCGACCTTT-TGCTC...................................................................................22200.0510000000000000000000000000000000000000000010
....................................................................................GTTCCGCGACCTTT-TGCTCC..................................................................................20200.0510000000000000000000000000000010000000000000
..........ACCGCTCCGACTCGGTCACCAGAGC........................................................................................................................................................25200.0510000010000000000000000000000000000000000000
...................................................................................TGTTCCGCGACCTTT-TGC.....................................................................................18200.0510000000000000000000000000001000000000000000
.................................................................................TCTGTTCCGCGACCTTT-TGCTCCTTTT..............................................................................27200.0510000000000000000000000000000001000000000000
..................................................................................CTGTTCCGCGACCTTT-TGCTCC..................................................................................22200.0510001000000000000000000000000000000000000000
....................................................................................GTTCCGCGACCTTT-TGCTC...................................................................................19200.0510000010000000000000000000000000000000000000

Generated: 12/06/2013 at 02:34 PM