ID:

dsi_188

 Coordinate:

chrU_M_105:896-982 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.8 -9.5 -9.4

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AGGCAAGACAAACCAAGAATTTTTCGCATGGGGCCAATTAATCAAAAATATTATGGATTTAAAATCAACGAATTTCTAAGGTGAAGAGCATATTTTGTCAGATTTACAAGGCATGAGCACACGTATGCACACATACAGTTGTA
******************************************......((((((.......((((((((.((((((((..((((.......))))))).................)))))..)))))))).....))))))........************************************ 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR553485
Ovary		 SRR618934
Ovary		 SRR553487
Ovary		 SRR553486
Ovary		 M024
male body
 M025
embryo
 M053
Female-body
............................................................................................................................................... 18 0 20 17.60 352 352 0 0 0 0 0 0 0
.........................................................CAAGAATTTTTCGCATGGGGCCAA.............................................................. 24 0 1 9.00 9 8 0 1 0 0 0 0 0
.........................................................CAAGAATTTTTCGCATGGG................................................................... 19 0 2 8.00 16 16 0 0 0 0 0 0 0
.....................................................................................................................TTCTAAGGTGAAGAGCATA....... 19 0 2 4.00 8 8 0 0 0 0 0 0 0
.........................................................CAAGAATTTTTCGCATGGGG.................................................................. 20 0 2 2.50 5 4 1 0 0 0 0 0 0
.........................................................................................................................AAGGTGAAGAGCATATTTTGTC 22 0 3 2.00 6 6 0 0 0 0 0 0 0
.........................................................CAAGAATTTTTCGCATGGGGCC................................................................ 22 0 1 2.00 2 0 1 0 0 0 1 0 0
.........................................................CAAGAATTTTTCGCATGGGGCCA............................................................... 23 0 1 2.00 2 1 0 0 1 0 0 0 0
............................................................................................................................................... 17 0 20 1.85 37 0 0 37 0 0 0 0 0
.........................................................CAAGAATTTTTCGCATGGGGCCAATTA........................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................................TTCTAAGGTGAAGAGCATATT..... 21 0 2 1.00 2 2 0 0 0 0 0 0 0
.........................................................CAAGAATTTTTCGCATGGGGCCAAT............................................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0
..............................................................................................................AACGAATTTCTAAGGTGA............... 18 0 1 1.00 1 0 0 0 0 1 0 0 0
.......................................................................................................................CTAAGGTGAAGAGCATAT...... 18 0 2 1.00 2 2 0 0 0 0 0 0 0
...............................................................................................................ACGAATTTCTAAGGTGA............... 17 0 1 1.00 1 0 0 0 0 1 0 0 0
.........................................................CAAGAATTTTTCGCATGGGGGCAATT............................................................ 26 1 1 1.00 1 0 1 0 0 0 0 0 0
.........................................................CAAGAATTTTTCGCATGGGGC................................................................. 21 0 2 1.00 2 0 2 0 0 0 0 0 0
............................................................................................................................................... 30 0 20 0.70 14 0 0 0 14 0 0 0 0
.....................................................................................................................TTCTAAGGTGAAGAGCA......... 17 0 2 0.50 1 0 1 0 0 0 0 0 0
.........................................................CAAGAATTTTTCGCATAGGGCCAAT............................................................. 25 1 3 0.33 1 0 0 1 0 0 0 0 0
............................................................................................................................................... 20 0 20 0.20 4 0 0 4 0 0 0 0 0
.............................................................................................ATTTTGGATTTAAAATCATC.............................. 20 2 5 0.20 1 0 0 0 0 0 0 0 0
.........................................................CAAGAATTTTTCGCATG..................................................................... 17 0 20 0.15 3 0 0 0 3 0 0 0 0
........................................................ACAAGAATTTTTCGCATGGGGCCAA.............................................................. 25 1 20 0.15 3 0 2 0 0 1 0 0 0
......................................................................................................TTAAAGTCAACGAATTTCTAAGGTG................ 25 1 20 0.15 3 0 0 0 0 3 0 0 0
......................................................................................................................TCTAAGATGAAGAGCAAA....... 18 2 16 0.13 2 0 0 2 0 0 0 0 0
.....................................................................................................................TTCTAAGATGAAGAGCAAATTT.... 22 2 9 0.11 1 0 0 1 0 0 0 0 0
......................................................................................................................TCTAAGATGAAGAGCAAATT..... 20 2 9 0.11 1 0 0 1 0 0 0 0 0
............................................................................................................................................... 29 0 20 0.10 2 0 0 0 2 0 0 0 0
............................................................................................................................................... 25 0 20 0.10 2 0 0 0 0 0 0 2 0
............................................................................................................................................... 26 0 20 0.10 2 0 0 0 0 2 0 0 0
.........................................................CAAGAATTTTTCGCATGGGGTCAAT............................................................. 25 1 10 0.10 1 0 1 0 0 0 0 0 0
............................................................................................................................................... 28 0 20 0.10 2 0 0 1 0 1 0 0 0
............................................................................................................................................... 20 0 20 0.10 2 0 0 2 0 0 0 0 0
............................................................................................................................................... 24 0 20 0.10 2 0 2 0 0 0 0 0 0
........................................................ACAAGAATTTTTCGCATGGGGCCAAT............................................................. 26 1 20 0.10 2 0 1 1 0 0 0 0 0
..............................................................................................................AACGAATTTCTAAGGTGAAGGGC.......... 23 1 20 0.10 2 0 0 0 0 2 0 0 0
.......................................................................................................................CTAAGATGAAGAGCAAAT...... 18 2 19 0.05 1 0 0 1 0 0 0 0 0
............................................................................................................................................... 24 0 20 0.05 1 0 0 1 0 0 0 0 0
........................................................................................................................TAAGATGAAGAGCAAATTT.... 19 2 20 0.05 1 0 0 1 0 0 0 0 0
.......................................................................................................TAAAGTTAACGAATTTCTAAGGTGA............... 25 2 20 0.05 1 0 0 0 0 1 0 0 0
............................................................................................................................................... 26 1 20 0.05 1 0 0 0 0 0 0 0 0
..........................................................................................................AGTCAACGAATTTCTAAGG.................. 19 1 20 0.05 1 0 0 0 0 1 0 0 0
............................................................................................................................................... 30 1 20 0.05 1 0 1 0 0 0 0 0 0
............................................................................................................................................... 25 0 20 0.05 1 0 0 0 0 0 0 0 1
............................................................................................................................................... 15 0 20 0.05 1 0 0 1 0 0 0 0 0
............................................................................................................................................... 16 0 20 0.05 1 0 0 1 0 0 0 0 0
.......................................................................................................TAAAGTCAACGAATTTCTAAGGTGAA.............. 26 1 20 0.05 1 0 0 0 1 0 0 0 0
............................................................................................................................................... 30 1 20 0.05 1 0 1 0 0 0 0 0 0
.......................................................................................................TAAAGTCAACGAATTTCTAATGTG................ 24 2 20 0.05 1 0 0 0 0 1 0 0 0
........................................................................................................TAAGTCAACGAATTTCTAAGGTG................ 23 2 20 0.05 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

TACAACTGTATGTGTGCATACGTGTGCTCATGCCTTGTAAATCTGACAAAATATGCTCTTCACCTTAGAAATTCGTTGATTTTAAATCCATAATATTTTTGATTAATTGGCCCCATGCGAAAAATTCTTGGTTTGTCTTGCCT
************************************........((((((.....((((((((..(((((.................(((((((.......))))..)))))))).)))))))).......))))))......****************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
Ovary		 M053
Female-body		 O002
Head
 SRR553487
Ovary		 SRR553485
Ovary		 SRR553488
Ovary		 SRR553486
Ovary		 GSM343915
embryo
 M025
embryo
...........................................TGACAAAATTTGCTCTTCACCTTAGA.......................................................................... 26 1 2 16.50 33 0 0 0 7 22 3 1 0 0
..CAACTGTATGTGTGCATACGTGTGC.................................................................................................................... 25 0 20 3.20 64 19 5 32 0 6 0 0 2 0
..CAACTGTATGTGTGCATACGTGTGCTCA................................................................................................................. 28 0 20 1.65 33 2 12 0 2 5 8 4 0 0
......TGTATGTGTGCATACGTGTGCTCATGC.............................................................................................................. 27 0 20 1.55 31 31 0 0 0 0 0 0 0 0
...........................................TGACAAAATTTGCTCTTCACCTTA............................................................................ 24 1 2 1.50 3 0 0 0 0 0 3 0 0 0
...........................................TGACAAAATATGCTCTTCACCTTAGA.......................................................................... 26 0 2 1.00 2 0 0 0 1 1 0 0 0 0
..........TGTGTGCATACGTGTGCTCATG............................................................................................................... 22 0 20 1.00 20 20 0 0 0 0 0 0 0 0
...AACTGTATGTGTGCATACGTGTGCTCA................................................................................................................. 27 0 20 1.00 20 13 3 0 1 3 0 0 0 0
......TGTATGTGTGCATACGTGTGCTCA................................................................................................................. 24 0 20 0.90 18 0 11 0 2 2 3 0 0 0
...AACTGTATGTGTGCATACGT........................................................................................................................ 20 0 20 0.60 12 12 0 0 0 0 0 0 0 0
...........................................TGACAAAATATGCTCTTCACCTTAG........................................................................... 25 0 2 0.50 1 0 0 0 1 0 0 0 0 0
...........................................TGACAAAATTTGCTCTTCACCTTAG........................................................................... 25 1 2 0.50 1 0 0 0 1 0 0 0 0 0
.......GTATGTGTGCATACGTGTGC.................................................................................................................... 20 0 20 0.45 9 9 0 0 0 0 0 0 0 0
......TGTATGTGTGCATACGTGTGCTC.................................................................................................................. 23 0 20 0.40 8 7 0 0 0 0 0 0 1 0
..........TGTGTGCATACGTGTGC.................................................................................................................... 17 0 20 0.40 8 8 0 0 0 0 0 0 0 0
....ACTGTATGTGTGCATACGT........................................................................................................................ 19 0 20 0.35 7 7 0 0 0 0 0 0 0 0
...........................................TGACAAAATATGCTTTTCACCTTAGA.......................................................................... 26 1 3 0.33 1 0 0 0 0 1 0 0 0 0
................................................................TTAGAAATTCGTTGACTTTAAATT....................................................... 24 2 20 0.25 5 0 0 0 0 0 0 5 0 0
.........ATGTGTGCATACGTGTGC.................................................................................................................... 18 0 20 0.25 5 5 0 0 0 0 0 0 0 0
...........................................TGACAAAATATGCTCTTCAACTTAGA.......................................................................... 26 1 5 0.20 1 0 0 0 1 0 0 0 0 0
...........................................TGACAAAATATGCCCTTCACCTTAGAAAT....................................................................... 29 1 20 0.20 4 0 0 0 2 2 0 0 0 0
......TGTATGTGTGCATACGTGTGCTCATG............................................................................................................... 26 0 20 0.20 4 4 0 0 0 0 0 0 0 0
..CAACTGTATGTGTGCATACG......................................................................................................................... 20 0 20 0.20 4 4 0 0 0 0 0 0 0 0
......TGTATGTGTGCATACGTGTGCTCAT................................................................................................................ 25 0 20 0.20 4 4 0 0 0 0 0 0 0 0
..........TGTGTGCATACGTGTGCTC.................................................................................................................. 19 0 20 0.15 3 3 0 0 0 0 0 0 0 0
..CAACTGTATGTGTGCATACGT........................................................................................................................ 21 0 20 0.15 3 0 0 0 0 0 0 0 0 3
.............GTGCATACGTGTGCTCATGC.............................................................................................................. 20 0 20 0.15 3 3 0 0 0 0 0 0 0 0
........TATGTGTGCATACGTGTGC.................................................................................................................... 19 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...............GCATACGTGTGCTCA................................................................................................................. 15 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...............GCATACGTGTGCTCATG............................................................................................................... 17 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..........TGTGTGCATACGTGTG..................................................................................................................... 16 0 20 0.10 2 2 0 0 0 0 0 0 0 0
......TGTATGTGTGCATACG......................................................................................................................... 16 0 20 0.10 2 2 0 0 0 0 0 0 0 0
......TGTATGTGTGCATACGTGT...................................................................................................................... 19 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...AACTGTATGTGTGCATACGTGTGCTC.................................................................................................................. 26 0 20 0.10 2 1 1 0 0 0 0 0 0 0
..........TGTGTGCATACGTGTGCTCATGC.............................................................................................................. 23 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...........................................TGACAAAATATGCCCTTCACCTTAGAAA........................................................................ 28 1 20 0.10 2 0 0 0 0 1 1 0 0 0
......TGTATGTGTGCATACGTGTGCT................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0 0 0 0
................................................................TTAGAAATTCGTTGACTTTAAAT........................................................ 23 1 20 0.10 2 0 0 0 0 0 2 0 0 0
.............GTGCATACGTGTGCT................................................................................................................... 15 0 20 0.10 2 2 0 0 0 0 0 0 0 0
......TGTATGTGTGCATACGTG....................................................................................................................... 18 0 20 0.10 2 2 0 0 0 0 0 0 0 0
........TATGTGTGCATACGTGTGCT................................................................................................................... 20 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..CAACTGTATGTGTGCATACGTGTG..................................................................................................................... 24 0 20 0.10 2 0 0 0 2 0 0 0 0 0
...AACTGTATGTGTGCATACGTGTGC.................................................................................................................... 24 0 20 0.10 2 1 0 0 0 0 0 0 1 0
.......GTATGTGTGCATACGTGTGCT................................................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0
TACAACTGTATGTGTGCATACGTGTGCT................................................................................................................... 28 0 20 0.10 2 1 0 0 0 0 0 1 0 0
..CAACTGTATGTGTGCATACGTGTGCT................................................................................................................... 26 0 20 0.10 2 1 0 0 1 0 0 0 0 0
...........................................TTACAAAATTTGCTCTTCACCTTAGA.......................................................................... 26 2 11 0.09 1 0 0 0 0 0 0 1 0 0
......TGTCTGTGTGCATACGTGTGCTCA................................................................................................................. 24 1 20 0.05 1 0 1 0 0 0 0 0 0 0
......TGTATGTGTGCATACGTGTGCTCAA................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..CAACTGTATGTGTGCATACTTGTGC.................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
................................................................TTAGAAATTCGTTGACTTT............................................................ 19 1 20 0.05 1 0 0 0 0 0 1 0 0 0
....ACTGTATGTGTGCATACG......................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...AACTGTATGTGTGCATACGTGT...................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..................TACGTGTGCTCATGC.............................................................................................................. 15 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...........GTGTGCATACGTGTGCTC.................................................................................................................. 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0
......TGTATGTGTGCATAC.......................................................................................................................... 15 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..........TGCGTGCATACGTGTGC.................................................................................................................... 17 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.............................................................................................TATTTTTGATTAATTGG................................. 17 0 20 0.05 1 0 0 0 1 0 0 0 0 0
..CAACTGTATGTGTGTATACGAGCGC.................................................................................................................... 25 3 20 0.05 1 0 0 0 0 0 0 0 1 0
..............TGCATACGTGTGCTC.................................................................................................................. 15 0 20 0.05 1 1 0 0 0 0 0 0 0 0
......TGTATGTGTGCATACGT........................................................................................................................ 17 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................TTCACCTTAGAAATTCGTTGACTTT............................................................ 25 1 20 0.05 1 0 0 0 0 0 1 0 0 0
..........TGTGTGCATACGTGTGCTCAT................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................CTGACAAAATATGCCCTTCACCTTAGA.......................................................................... 27 1 20 0.05 1 0 0 0 0 0 0 1 0 0
....ACTGTATGTGTGCGTACGT........................................................................................................................ 19 1 20 0.05 1 1 0 0 0 0 0 0 0 0
....ACTGTATGTGCGCATACGTGTGCTCA................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...ACCTGTATGTGTGCATACGT........................................................................................................................ 20 1 20 0.05 1 1 0 0 0 0 0 0 0 0
............TGTGCATACGTGTGCTCATGC.............................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...AACTGTATGTGTGCATACG......................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0
....ACGTTATGTGTGCATACGTGTGCTCA................................................................................................................. 26 2 20 0.05 1 1 0 0 0 0 0 0 0 0
...AACTGTATGTGTGCATACGCGTGCTCA................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0
......TGTATGTGTGCATACGTGTGCTTA................................................................................................................. 24 1 20 0.05 1 0 1 0 0 0 0 0 0 0
......TGTATGTGTGAATACGTGTGCTC.................................................................................................................. 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.......GTATGTGTGCATACGT........................................................................................................................ 16 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.......GTATGTGTGCATACGTGTGCC................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...AACTGTATGTGTGCAT............................................................................................................................ 16 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..CGACTGTATGTGTGCATACGT........................................................................................................................ 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0
......TGTGTGTGTGCATACGTGTG..................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................CACCTTAGAAATTCGTTGACTTTAAATC....................................................... 28 1 20 0.05 1 0 0 0 0 0 0 1 0 0
...AACTTTATGTGTGCATACGT........................................................................................................................ 20 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..CAACTGTATGTGTGCATACGTGT...................................................................................................................... 23 0 20 0.05 1 0 0 0 1 0 0 0 0 0
......TGTATATGTGCATACGTGTGCTCATGC.............................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..CAACTGTATGTGTGCATACGTGTGA.................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..CCACTGTATGTGTGCATACGTGTGCT................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
....ACTGTATGTGTGCATACGTGTGCTCAT................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 chrU_M_105:846-1032 - dsi_188 AGGCAAGACAAACCAAGAATTTTTCGCATGGGGCCAATTAATCAAAAATATTATGGATTTAAAATCAACGAATTTCTAAGGTGAAGAGCATATTTTGTCAGATTTACAAGGCATGAGCACACGTATGCACACATACAGTTG-----------TA-----------------------------------------------------------------------------------------------------
droSec2 scaffold_3:282005-282147 - AATT----------------------------------------------------------------------------------------------------TACAATGCATGAGCACACGTATGCACACATACAGTTG-----------TATGCTATCACTGTATGCGTAGAAAAGAGCTGTTTGCTGTAGCGCTCTCCG-CTCTTTCTCTCTCGAACAAAAACTCAAGAGAGCCTGGAGCCACCTCTAGAG
dm3 chr3LHet:288350-288492 + AATT----------------------------------------------------------------------------------------------------TACAATGCATGAGCATACGTGTGCACACATACAGTTG-----------TCTGCTATCACTGTATGCGTAGAAAAGAGCTGTTCGCTGTAGCGCTCTCCG-CTCTCTCGCTCTCTAACAAAAATTCGAGAGAGCCTGGAGCCACCTCTAGAG
droEre2 scaffold_4929:25135230-25135373 - AATT----------------------------------------------------------------------------------------------------TACAATATATGAGCACACGTGTGCACACATACAGTGC-----------TCGGCTGTCGCTGTATGCGTAAAAGAGAGCTGCTGGCTCTAGAGCGCTCTCTCTCTCTGGCTCTTAAACAAAAATTCGAGAGAGCCTGGAGCCAGCTCTAGAG
droYak3 v2_chr2L_random_010:624168-624310 + AATA----------------------------------------------------------------------------------------------------TACAAGGCATGAGCATACCCAGGCACACATACAGTGG-----------TCGGCTGTCACTGTATGCGTACAAGAAAGCTGCTGGCTCTAGAGCTTTCTG-CTCTCTGTGTTTTGAACAAAAATGCGAGAGAGCCTTGAGCCAGCTTTAGAG
droBia1 scf7180000301480:11888-12016 - A---------------------------------------------------------------------------------------------------------CAATGCGCGAGAATACATGTGCACACATCCAATCG-----------TGTTCTGTCGCTGTATGCGTGCATGAGAGGCGCTAGCTCTAGAGCGCTCTC--TCTCTGGCTTTTGAGC--------AAGAGAGCCTGGAGCCAGCTCTAGAG
droTak1 scf7180000411080:3441-3574 + CAAT----------------------------------------------------------------------------------------------------AACAATGCGCGAGAATACATGTGCACACATACAATCG-----------TCTTCTGTCTCTGTATGCGTGAATGAGAGCGGCTGGCTCTAGAGCGCTCTC--TCTCTGGCTTTTGAGC--------AAGAGAGCCTGGAGCCAGCTCTAGGG
droRho1 scf7180000776994:14800-14943 - GTGCATTGCAGCGA------------------------------------------------------------------------------------------TGAAATGCTTGTGAATACATGTACACACATACAGTCG-----------TCGGCTGTAGCAGTATGCGTACAAGAGAGCGGCTGGCTCTAGAGCGCTTTC--TCGCTGGCTTTTGGAC--------AAGAGAGCGAAAAGCCACTTGAAAAG
droKik1 scf7180000302203:3047-3186 - AAAT----------------------------------------------------------------------------------------------------TGCCCTTCTTGAGG-TCCGTTTGCACACAAACACCCG-----------GCTGC-GTCGCTGAATGCGTACAAGAGAACGGCTGGCTCTAGAGCGCTCTC-TTCGCTGGCTTTTGAACAA-AATTTAAGAGAGCCTGGAGCCAGTTCAAAAG
dp5 4_group3:9794423-9794559 - GATC----------------------------------------------------------------------------------------------------TCCAATGCATGAGCATACGTGTGCACACACACAGTCATATCTCAGTCCTCGGCTGCCTCATGACGAACACGAAAGAGCGGCTAGCTTTTGAGTGCTCTC--GCTCCTTCTCTCA-----GAAGGCAGAAGAGCAAGAAGC-----------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
AGGCAAGACAAACCAAGAATTTTTCGCATGGGGCCAATTAATCAAAAATATTATGGATTTAAAATCAACGAATTTCTAAGGTGAAGAGCATATTTTGTCAGATTTACAAGGCATGAGCACACGTATGCACACATACAGTTG-----------TA-----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
...............................................................................................................................................................................................................................................................182017.6035200003520000000
.........................................................CAAGAATTTTTCGCATGGGGCCAA..............................................................................................................................................................................2419.009000080000001
.........................................................CAAGAATTTTTCGCATGGG...................................................................................................................................................................................1928.00160000160000000
.....................................................................................................................TTCTAAGGTGAAGAGCATA.......................................................................................................................1924.008000080000000
.........................................................CAAGAATTTTTCGCATGGGG..................................................................................................................................................................................2022.505000040010000
.........................................................................................................................AAGGTGAAGAGCATATTTTG-----------TC-----------------------------------------------------------------------------------------------------2232.006000060000000
.........................................................CAAGAATTTTTCGCATGGGGCC................................................................................................................................................................................2212.002001000010000
.........................................................CAAGAATTTTTCGCATGGGGCCA...............................................................................................................................................................................2312.002000010000100
...............................................................................................................................................................................................................................................................17201.85370000000000037
.........................................................CAAGAATTTTTCGCATGGGGCCAATTA...........................................................................................................................................................................2711.001000000010000
.....................................................................................................................TTCTAAGGTGAAGAGCATATT.....................................................................................................................2121.002000020000000
.........................................................CAAGAATTTTTCGCATGGGGCCAAT.............................................................................................................................................................................2511.001000000000100
..............................................................................................................AACGAATTTCTAAGGTGA...............................................................................................................................1811.001000000001000
.......................................................................................................................CTAAGGTGAAGAGCATAT......................................................................................................................1821.002000020000000
...............................................................................................................ACGAATTTCTAAGGTGA...............................................................................................................................1711.001000000001000
.........................................................CAAGAATTTTTCGCATGGGGC.................................................................................................................................................................................2121.002000000020000
...............................................................................................................................................................................................................................................................30200.70140000000001400
.....................................................................................................................TTCTAAGGTGAAGAGCA.........................................................................................................................1720.501000000010000
...............................................................................................................................................................................................................................................................20200.204000000000004
.........................................................CAAGAATTTTTCGCATG.....................................................................................................................................................................................17200.153000000000300
...............................................................................................................................................................................................................................................................29200.102000000000200
...............................................................................................................................................................................................................................................................25200.102000200000000
...............................................................................................................................................................................................................................................................26200.102000000002000
...............................................................................................................................................................................................................................................................28200.102000000001001
...............................................................................................................................................................................................................................................................20200.102000000000002
...............................................................................................................................................................................................................................................................24200.102000000020000
...............................................................................................................................................................................................................................................................24200.051000000000001
...............................................................................................................................................................................................................................................................25200.051000000100000
...............................................................................................................................................................................................................................................................15200.051000000000001
...............................................................................................................................................................................................................................................................16200.051000000000001
droSec2
AATT----------------------------------------------------------------------------------------------------TACAATGCATGAGCACACGTATGCACACATACAGTTG-----------TATGCTATCACTGTATGCGTAGAAAAGAGCTGTTTGCTGTAGCGCTCTCCG-CTCTTTCTCTCTCGAACAAAAACTCAAGAGAGCCTGGAGCCACCTCTAGAGSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
........................................................................................................................................................TATGCTATCACTGTATGCGTAGA................................................................................23200.4599000
.......................................................................................................................................................................................GTTTGCTGTAGCGCTCTCCG-CTCT...............................................24200.3570007
.........................................................................................................................................................ATGCTATCACTGTATGCGTAG.................................................................................21200.1533000
.............................................................................................................................................................................................TGTAGCGCTCTCCG-CTCTTTC............................................21200.1530003
..........................................................................................................................................................TGCTATCACTGTATGCGTAGAAAAGA...........................................................................26200.1020002
.....................................................................................................................................................................................................................................AAGAGAGCCTGGAGCCACCTC.....21200.1022000
.......................................................................................................................................................................................................................TCGAACAAAAACTCAAGAGAGCCTGG..............26200.1020200
........................................................................................................................................................................................TTTGCTGTAGCGCTCTCCG-C..................................................20200.1021001
............................................................................................................................................G-----------TATGCTATCACTGTATGCG....................................................................................20200.0510001
........................................................................................................................................................................................................................CGAACAAAAACTCAAGAGAGCCTGGA.............26200.0510001
.........................................................................................................................................................................................TTGCTGTAGCGCTCTCCG-CTCTTT.............................................24200.0510001
..................................................................................................................................................................................GAGCTGTTTGCTGTAGCGCTC........................................................21200.0510001
.........................................................................................................................................................................................................................GAACAAAAACTCAAGAGAGCC.................21200.0510001
..........................................................................................................................................TTG-----------TATGCTATCACTGTATG......................................................................................20200.0510001
...........................................................................................................................................................................................GCTGTAGCGCTCTCCG-CTCTT..............................................21200.0510001
.................................................................................................................TGAGCACACGTATGCACACATACAGT....................................................................................................................26200.0510010
..................................................................................................................................................................................................................................CTCAAGAGAGCCTGGAGCCACC.......22200.0511000
droEre2
AATT----------------------------------------------------------------------------------------------------TACAATATATGAGCACACGTGTGCACACATACAGTGC-----------TCGGCTGTCGCTGTATGCGTAAAAGAGAGCTGCTGGCTCTAGAGCGCTCTCTCTCTCTGGCTCTTAAACAAAAATTCGAGAGAGCCTGGAGCCAGCTCTAGAGSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
........................................................................................................................................................................................................................TAAACAAAAATTCGAGAGAGCCTGGAGC...........2820.501000001
.....................................................................................................................................TACAGTGC-----------TCGGCTGTCGCTGT.........................................................................................22130.081000010
................................................................................................................................ACACATACAGTGC-----------TCGGCTGT...............................................................................................21130.081000010
.........................................................................................................................................................................................................................................GAGCCTGGAGCCAGCTCTAGA.21200.051001000
droYak3
AATA----------------------------------------------------------------------------------------------------TACAAGGCATGAGCATACCCAGGCACACATACAGTGG-----------TCGGCTGTCACTGTATGCGTACAAGAAAGCTGCTGGCTCTAGAGCTTTCTG-CTCTCTGTGTTTTGAACAAAAATGCGAGAGAGCCTTGAGCCAGCTTTAGAGSizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
.......................................................................................................................TACCCAGGCACACATACAGTGG-----------TCGGC..................................................................................................2720.5010000010
droBia1
A---------------------------------------------------------------------------------------------------------CAATGCGCGAGAATACATGTGCACACATCCAATCG-----------TGTTCTGTCGCTGTATGCGTGCATGAGAGGCGCTAGCTCTAGAGCGCTCTC--TCTCTGGCTTTTGAGC--------AAGAGAGCCTGGAGCCAGCTCTAGAGSizeHit CountTotal NormTotal
No Reads
droTak1
CAAT----------------------------------------------------------------------------------------------------AACAATGCGCGAGAATACATGTGCACACATACAATCG-----------TCTTCTGTCTCTGTATGCGTGAATGAGAGCGGCTGGCTCTAGAGCGCTCTC--TCTCTGGCTTTTGAGC--------AAGAGAGCCTGGAGCCAGCTCTAGGGSizeHit CountTotal NormTotal
No Reads
droRho1
GTGCATTGCAGCGA------------------------------------------------------------------------------------------TGAAATGCTTGTGAATACATGTACACACATACAGTCG-----------TCGGCTGTAGCAGTATGCGTACAAGAGAGCGGCTGGCTCTAGAGCGCTTTC--TCGCTGGCTTTTGGAC--------AAGAGAGCGAAAAGCCACTTGAAAAGSizeHit CountTotal NormTotal
No Reads
droKik1
AAAT----------------------------------------------------------------------------------------------------TGCCCTTCTTGAGG-TCCGTTTGCACACAAACACCCG-----------GCTGC-GTCGCTGAATGCGTACAAGAGAACGGCTGGCTCTAGAGCGCTCTC-TTCGCTGGCTTTTGAACAA-AATTTAAGAGAGCCTGGAGCCAGTTCAAAAGSizeHit CountTotal NormTotal
No Reads
dp5
GATC----------------------------------------------------------------------------------------------------TCCAATGCATGAGCATACGTGTGCACACACACAGTCATATCTCAGTCCTCGGCTGCCTCATGACGAACACGAAAGAGCGGCTAGCTTTTGAGTGCTCTC--GCTCCTTCTCTCA-----GAAGGCAGAAGAGCAAGAAGC-----------SizeHit CountTotal NormTotalV112
Male-body		V043
Embryo		V051
Head		M022
Male-body		M040
Female-body		M059
Embryo		M062
Head
No Reads

Generated: 12/06/2013 at 02:33 PM