ID:

dsi_182

 Coordinate:

chrU_M_2709:3139-3248 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.1 -19.5 -19.5 -19.2

Flybase annnotation

intergenic

Repeatable elements

NameClassFamily
XDMRUnknownUnknown

Sense Strand Reads

AAAATTAATTTTTGGCCAAATTTTCGAATTTTTTGTAACACGTACCATCATCAAAATTTGCAAAAAATTGAAACCTCCTAGAGAGCAAAAAGGAGTACCATTTTGTACTCCTTACAAGCAATACTAACAACCCCTTTCACTTTTAAACTGATTTTGTAAAATTAATTTTTGGCCAAATTTTCGAATTTTTTGTAAAATGCGAAAATTTGC
***********************************.........(((.........(((((((((.........(((...))).((...(((((((((......)))))))))....))................................))))))))).........)))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR553488
Ovary		 SRR553485
Ovary		 SRR553486
Ovary		 M053
Female-body		 SRR618934
Ovary		 SRR553487
Ovary
..................................................................ATTGAAACCTCCTAGAGAGCAAAAA....................................................................................................................... 25 0 5 4.00 20 20 0 0 0 0 0 0
..........................................................................................................................................................................GGCCAAATTTTCGAATTTTTTGTA................ 24 0 20 1.40 28 0 0 28 0 0 0 0
............TGGCCAAATTTTCGAATTTTTTGTA............................................................................................................................................................................. 25 0 20 1.30 26 0 26 0 0 0 0 0
..................................................................ATTGAAACCTCCTAGAGAGCA........................................................................................................................... 21 0 5 1.00 5 5 0 0 0 0 0 0
...................................................................TTGAAACCTCCTAGAGAGCAAAAAGG..................................................................................................................... 26 0 5 0.60 3 0 1 1 1 0 0 0
..........................................................................................................................................................................GGCCAAATTTTCGAATTTTTTGTAA............... 25 0 20 0.45 9 0 9 0 0 0 0 0
...................................................................TTGAAACCTCCTAGAGA.............................................................................................................................. 17 0 5 0.20 1 0 0 0 0 0 1 0
...................................................................TTGAAACCTCCCAGAGAGCAAAAAGG..................................................................................................................... 26 1 5 0.20 1 0 0 0 1 0 0 0
..................................................................ATTGAAACCTCCTAGAGAGCAAAAAGG..................................................................................................................... 27 0 5 0.20 1 0 0 0 0 1 0 0
..................................................................................................................................................................TAATTTTTGGCCAAATTTTCGAATT....................... 25 0 20 0.10 2 0 0 2 0 0 0 0
..........................................................................................................................................................................GGCCAAATTTTCGAATTTTTTGTAGA.............. 26 1 20 0.05 1 0 0 0 1 0 0 0
.............GGCCAAATTTTCGAATTTTTTGTAACT.......................................................................................................................................................................... 27 1 20 0.05 1 0 0 0 1 0 0 0
......................................................................AAACCACATAGAGAGCAA.......................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0
..........................................................................................................................................................................GCCCAAATTTTCGAATTTTTTGTAAAA............. 27 1 20 0.05 1 0 1 0 0 0 0 0
.......................................................................................................................................................................TTTGGCCAAATTTTCGAATTTTTTGTAA............... 28 0 20 0.05 1 0 0 0 0 0 0 1
........................................................................................................................................................................TTGGCCAAATTTTCGAATTTTTTGTAAAA............. 29 0 20 0.05 1 0 0 0 1 0 0 0
.................................................................................................................................................................................TTTTCGAATTTTTTGTAAAATGCGG........ 25 1 20 0.05 1 0 0 1 0 0 0 0
........................................................................................................................................................................TTGGCCAAATTTTCGAATTTTTTGTAA............... 27 0 20 0.05 1 0 0 0 0 1 0 0
........................................................................................................................................TCACTTTTAAACTGATTTTGTAAAATT............................................... 27 0 20 0.05 1 0 0 0 1 0 0 0

Anti-sense strand reads

GCAAATTTTCGCATTTTACAAAAAATTCGAAAATTTGGCCAAAAATTAATTTTACAAAATCAGTTTAAAAGTGAAAGGGGTTGTTAGTATTGCTTGTAAGGAGTACAAAATGGTACTCCTTTTTGCTCTCTAGGAGGTTTCAATTTTTTGCAAATTTTGATGATGGTACGTGTTACAAAAAATTCGAAAATTTGGCCAAAAATTAATTTT
***********************************...(((.........(((((((((................................((....(((((((((......)))))))))...)).(((...))).........))))))))).........))).........*********************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR553486
Ovary		 SRR553488
Ovary		 SRR618934
Ovary		 SRR553485
Ovary		 M053
Female-body		 SRR553487
Ovary		 M025
embryo
.................................................................TAAAAGTGAAAGGGGTTGTTA............................................................................................................................ 21 0 20 55.50 1110 1110 0 0 0 0 0 0 0
...............................................................................GTTGTTAGTATTGCTTGTAAGGAG........................................................................................................... 24 0 10 0.80 8 0 2 3 0 2 0 1 0
....................................................TACAAAATCAGTTTAAAAGTGA........................................................................................................................................ 22 0 20 0.55 11 0 11 0 0 0 0 0 0
..................................................................AAAAGTGAAAGGGGTTGTTAGTATTGC..................................................................................................................... 27 0 2 0.50 1 0 0 0 0 0 1 0 0
..................................................................AAAAGTGAAAGGGGTTGTTAGTATTCC..................................................................................................................... 27 1 2 0.50 1 0 0 0 1 0 0 0 0
................................................ATTTTACAAAATCAGTTTAAAAGTGA........................................................................................................................................ 26 0 20 0.30 6 0 0 6 0 0 0 0 0
...............................................................TTTAAAAGTGAAAGGG................................................................................................................................... 16 0 20 0.25 5 0 5 0 0 0 0 0 0
..........................................................ATCAGTTTAAAAGTGAAAGGG................................................................................................................................... 21 0 20 0.20 4 0 0 0 0 4 0 0 0
.........................................................................................................................TTTGCTCTCTAGGAGGTT....................................................................... 18 0 5 0.20 1 0 0 0 1 0 0 0 0
.........................................................................................TTGCTTGTAAGGAGTACAAAATGG................................................................................................. 24 0 10 0.20 2 0 0 0 1 0 1 0 0
..................................................................AAAAGTGAAAGGGGTTGTTAGTGGTGCTC................................................................................................................... 29 3 5 0.20 1 0 0 0 1 0 0 0 0
..............................................................................................TGTAAGGAGTACAAAATG.................................................................................................. 18 0 20 0.20 4 0 0 0 4 0 0 0 0
..................................................................AAAAGTGAAAGGGGTTGTTAGTATCCC..................................................................................................................... 27 2 6 0.17 1 0 0 0 1 0 0 0 0
..................................................................AAAAGTGAAAGGGGTTGTTAGTACCCC..................................................................................................................... 27 3 6 0.17 1 0 0 0 1 0 0 0 0
...............................................................................................................................................TTTTTTGCAAATTTTGATGATGGTACG........................................ 27 0 6 0.17 1 0 0 1 0 0 0 0 0
..................................................................................................................................................TTTGCAAATTTTGATGATGGTAC......................................... 23 0 20 0.15 3 0 3 0 0 0 0 0 0
..................................................................AAAAGTGAAAGGGGTTGTTAGTAT........................................................................................................................ 24 0 20 0.15 3 0 0 0 0 0 0 0 3
..............................AAATTTGGCCAAAAATTAATTTTACA.......................................................................................................................................................... 26 0 20 0.15 3 0 0 3 0 0 0 0 0
................TACAAAAAATTCGAAAAT................................................................................................................................................................................ 18 0 20 0.15 3 0 3 0 0 0 0 0 0
.......................................................TAAATCAGTTTAAAAGTGAAAGGG................................................................................................................................... 24 1 20 0.15 3 0 3 0 0 0 0 0 0
.............TTTTACAAAAAATTCGAAAATTTGGC........................................................................................................................................................................... 26 0 20 0.15 3 0 1 0 0 2 0 0 0
..................................................................................................................................................TTTGCAAATTTTGATGATGGTACG........................................ 24 0 7 0.14 1 0 0 0 0 1 0 0 0
..................................................................AAAAGTGAAAGGGGTTGTTAGTATGGC..................................................................................................................... 27 1 8 0.13 1 0 0 0 1 0 0 0 0
...................................................................................................................................................................................AAATTCGAAAATTTGGCCAAAAA........ 23 0 20 0.10 2 0 0 0 0 0 0 2 0
..................................................................AAAAGTGAAAGGGGTTGTTAGTATTC...................................................................................................................... 26 1 20 0.10 2 0 0 0 2 0 0 0 0
......................................................................GTGAAAGGGGTTGTTAG........................................................................................................................... 17 0 20 0.10 2 0 0 0 2 0 0 0 0
.........................................................................................TTGCTTGTAAGGAGTACAAAATGGTA............................................................................................... 26 0 10 0.10 1 0 0 0 1 0 0 0 0
..................................................................................................AGGAGTACAAAATGGT................................................................................................ 16 0 20 0.10 2 0 0 0 2 0 0 0 0
........................................................................GAAAGGGGTTGTTAGTAC........................................................................................................................ 18 1 20 0.10 2 0 0 0 2 0 0 0 0
...............................................................................GTTGTTAGTATTGCTTGTAAGGAGT.......................................................................................................... 25 0 10 0.10 1 0 1 0 0 0 0 0 0
.........................................................................................TTGCTTGTAAGGAGTACAAAATGGTAC.............................................................................................. 27 0 10 0.10 1 0 0 0 1 0 0 0 0
..............................................................................................................TGGTACTCCTTTTTGCTCTCGAC............................................................................. 23 2 11 0.09 1 0 0 1 0 0 0 0 0
.........................................................................................TTGCTTGTAAGGAGTA......................................................................................................... 16 0 11 0.09 1 0 0 0 1 0 0 0 0
...............................................................................GTTGTTAGTATTGCTTGTAAGGA............................................................................................................ 23 0 13 0.08 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................TTTTATGATTGTATGTGTTAC.................................. 21 3 14 0.07 1 0 1 0 0 0 0 0 0
..............................................................................................................TGGTACTCCTTTTTGCTCTCAA.............................................................................. 22 1 18 0.06 1 0 1 0 0 0 0 0 0
..................................................................................................................................TAGGAGGTTTCAATTTTTTGCA.......................................................... 22 0 20 0.05 1 0 0 0 0 0 0 1 0
..........................................................................................................................................................................TCTTACAAAAAATTCGAAAATTTGGC.............. 26 1 20 0.05 1 0 0 1 0 0 0 0 0
......................AAATTCGAAAATTTGGCCAAAAATT................................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0 0 0
..........................................................................................................................................TTCAATTTTTTGCAAATTTTGATGATGG............................................ 28 0 20 0.05 1 0 0 1 0 0 0 0 0
.............................................TTAATTTTACAAAATCAGTTTAAAA............................................................................................................................................ 25 0 20 0.05 1 0 0 0 0 0 0 1 0
.................ACAAAAAATTCGAAAAT................................................................................................................................................................................ 17 0 20 0.05 1 0 0 0 1 0 0 0 0
............................................................CAGTTTAAAAGTGAAAGGGGTTGTT............................................................................................................................. 25 0 20 0.05 1 0 0 0 0 0 1 0 0
.................................................................................................................................................TTTTGGAAATTTTGATGATGGTATG........................................ 25 2 20 0.05 1 0 0 0 1 0 0 0 0
..................................................TTTACAAAATCAGTTTAAAAGTGAAA...................................................................................................................................... 26 0 20 0.05 1 0 0 1 0 0 0 0 0
..................................................................AAAAGTGAAAGGGGTTGTTAGTACTACC.................................................................................................................... 28 3 20 0.05 1 0 0 0 1 0 0 0 0
...........CATTTTACAAAAAATTCGAAAATTTGGC........................................................................................................................................................................... 28 0 20 0.05 1 0 0 0 0 1 0 0 0
.........................................................................................................................................TTTCAATTTTTTGCAAATTTTGA.................................................. 23 0 20 0.05 1 0 0 1 0 0 0 0 0
....................................................TACAAAATCAGTTTAAAAGTGAAAGGGG.................................................................................................................................. 28 0 20 0.05 1 0 0 0 0 1 0 0 0
......................................................................................................................................AGGTTTCAATTTTTTGCAAATTTGGA.................................................. 26 1 20 0.05 1 0 0 0 0 1 0 0 0
.............................................................................................................................................................................TACAAAAAATTCGAAAATTTGGCCAAAAAT....... 30 0 20 0.05 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................TTACAAAAAAGTCGAAAATTTGGCCAAAA......... 29 1 20 0.05 1 0 0 0 0 1 0 0 0
..................................................TTTACAAAATCAGTTTAAAAGTGAAAGG.................................................................................................................................... 28 0 20 0.05 1 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 chrU_M_2709:3089-3298 - dsi_182 AAAATT---------AAT-------TTTTGGCCAAA-TTTTC-GAA-TT-TTTTGTA-ACACGTACCATCATCAAAATT-TG--CAAAAAATTGAAACCTCCTAGAGAGCAA-----AAA--GGAGTACCATTTTGTACTCCTTACAAGCA-ATACTAACAACCCCTTTCACTTT-TAAACTGATTTTGTAAAAT-TAATTTTTGGCCAAATTTTCGAATTTTTTGTAAAAT-------------GCGAAAATTTGC
droSec2 scaffold_892:1814-2005 + AAAATT---------AAT-------TTTTGGCCAAA-TTTTC-GAA-TT-TTTTGTA-AGGGGTACCATCATCAAAATT-TG--CAAAAAATTGAAACCTC-----CTAGAATTCCAAAACTTGAATGCAATTCGATTGGGATTC--------AAGAAACAACCCCTTTCACTTT-TAAACTGATTTTGTAAAAT-TAATTTTTGGCCAAAATC--------------------------AAATCATCAAAATTTGC
dm3 chrX:10383010-10383201 + AAAACT---------CAT-------TTTT------------------------CAAGTTG-GCTTTTTTGGCTATAACTTGA--CTAAAAATGGTCG---C----AGAGCAA-----AAA--GATGTACCATTTTATACTCCTTACGACCA-ATACTAACAACCCCTATCACTTT-TAAACGGATTTTGTAAAAT-TAATTTTTGGCCAAATTTTCGCATTTTTTGTAAGGGGTA-----ACATCATCAAAATTTGC
droEre2 scaffold_4690:4033132-4033334 + AAAAAC---------GGA-------TTTCGGC-AAAAATT-CAAA--TATTTTTG-A-TG-GGCATTTTAATCATAACTTGG--CTAAAAATGATCG---T----AAAGAAA-----AAA--GAATAACTGTTTTGAGCAGCTAATTACCA-TTGCTAACGACCCCTATCACTTT-TTGACGGATTTTGGAAAAT-TAATTTTTCGGCCAATTTTCGCATTTTTTGTAA------------CATCATCAAAATTTGC
droYak3 3L:11767612-11767813 + AAAACG---------A---------TTTTGGCCAAA-ATTTC-AAT--ATTTTCG-AATG--GTATTTTTGGTATAATTCGA--CTGAAAATGGTCA---T----AAAGCTA-----AAA--GAATAACATTTTTGTACTCCTAATTACCA-ATACTAACCAACCAAAACACTTT-TTGAGCGACTTTGTAAAAA-TAATTTTTGGCCAAATTTTCGCATTTTTTGTAA-----------AAATCATCAAAAATTGC
droEug1 scf7180000409554:3565570-3565780 - AAAACC---------GAT-------TTCTGAC-ACAAATTTT-CA-ATATTTTTT-A-AA--GTTTTCTAGCTATAACTTTATGAAAACAAACAGCA---A----GCAGCAA-----AAA--GAACGACTATTTTGTGCTGCTAACTACCA-AAACTTACTACCCCTATCACTCG-TTTTCCGATTTAGAGTAAT-TCATTTTTCATCCAAATTTCGCATTTTTGGTAAGGGGT------ACATCATCAAAATTTTC
droBia1 scf7180000302113:806110-806313 + AAATTT----------------------AAGGCAAAAATAGG-A-ACT--TTTTA-G-TA-GAATTTTTGTTCCTAATTTCC--ATAAAAGAAGCGA---C----TCAGCCA-----AGA--TAAACACTGTTTTGATCAGCTAACAACCT-AAGCTAACGATCTGTATCACTTC-CGGGTAGATTTTCGGAAATCTAATTTTTGGCC-AATTTTTGATTTTTTTACAAGGGGTT-----GCATCGAAATTTTTTGC
droTak1 scf7180000414549:259337-259548 + AAAAATTAAGATCTTGAT-------TTTTGGACAAAAATTTC-T-TAT--TTTCAAAATG--GGGTTTTTGATATAACTTGG--ACAAAAATTGTCT---A----AAATCAA-----AAA--GGCATACTGTTTTGTGCAGCTTACAACCGTATAATTAATATC-AGTGCACTTT-CCGACTGATTTCAGAAAAT-TAATTTTCGGCCCAATTTTCGCATTTTTGGTAAAA-------------AATGATTTTTTGC
droEle1 scf7180000491273:2144299-2144506 + TTAATT---------TAT-------T-TGGGC-CAA-ATGTA-TA-GTT-TTTGC-TATG--GTTTTTTAGAAATATTTTTC--TCAAATGACAACC---C----ACAACTA-----AAA--GAAAGACTGTTCTACACAGCTGACAAGCT-AAACTAACGACCCTCATCACTTT-TTGGCTAATTTTGAATAAT-TAAAATTTTGCCCATTTTTCGATTTTTTTATAAGGGGTA-----ACATCATAATTTTTTGC
droRho1 scf7180000757951:281-475 + TAAT----------------------TTTGGTCAAAAATTTC-C-GAG--TTTCAATACG--GGTATTTTGTTCTAACTTAG--CCCAAAAATGTCG---C----ACACCAA-----AAA--GAATAACCGTTTTGTGCAGCTGATGACCT-AAACTTTCAATCCCAAGT-----------CGATTTAAACATTTTTAATTTTGGACC-GATTTTTCATTTTTTTATAAGGGGTT-----AGGTCGTCATTATTTGC
droFic1 scf7180000453912:1568759-1568965 + AAAGAT---------TTGTTGACAATTTTGGT-AAAAATCAC-TAT--ATTTTTA-G-TA--ATTTTTCGGTTGTAAAAAGG--AAAAATAGTGACT---T----ACAGCGG-----AAC--CAAATACTATTTTGAGCACCTTATGACCA-ATGTTAACAAGTCCTATCACTTT-TTAAACGATTTAAAAAAAA-TGATTTTTGGCCT-ATTTTTGCATTTTTGGTAAT-------------TTTCCATTTTTTGC
droKik1 scf7180000302414:744807-745017 + AAAAAA---------AAT-------TTTCGATCGAT-TTTTT-CAA-AA-TTTGATA-AGGGGTACCATCATTAAAATT-TG--CAAAAAATCGAAAA--A----AATGAAATTTAAAATTCAGTATGCAGATTTATAGCCCTTATAAAAA-CTAGCACA-----AAACCGCTTTCCAAATTGATTTT----AAT-GCATTTTTGGCGAAATTACAGATTTTTTTAAATTTGGTT-----TTTTCCCAAAAATAATC
droWil2 scf2_1100000006624:679-889 - AAAACG---------GAT-------T-TTG-CCAAAAAG-TT-GAT--ATTTACA-AACG--GAACTTTCGTCATAACTTCG--CTAAAAATTGTCT---T----ATAGAAG-----TAA--GAATAACTGTTTTGAGAAACTAATTACCA-GCGCTAACGATCCCTATTACTTT-TTGAAT-ATTTAGGGAAAT-TAGTTTTGGGTC-AATTTACGCATTTTTTGTAAGGGGATGAGGGGAGTCATTAAAACTTGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
AAAATT---------AAT-------TTTTGGCCAAA-TTTTC-GAA-TT-TTTTGTA-ACACGTACCATCATCAAAATT-TG--CAAAAAATTGAAACCTCCTAGAGAGCAA-----AAA--GGAGTACCATTTTGTACTCCTTACAAGCA-ATACTAACAACCCCTTTCACTTT-TAAACTGATTTTGTAAAAT-TAATTTTTGGCCAAATTTTCGAATTTTTTGTAAAAT-------------GCGAAAATTTGCSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
..........................................................................................ATTGAAACCTCCTAGAGAGCAA-----AAA--.......................................................................................................................................2554.00200000200000000
............................................................................................................................................................................................................GGCCAAATTTTCGAATTTTTTGTA.............................24201.40280000000280000
............................TGGCCAAA-TTTTC-GAA-TT-TTTTGTA-.......................................................................................................................................................................................................25201.30260000000000260
..........................................................................................ATTGAAACCTCCTAGAGAGCA..................................................................................................................................................2151.005000050000000
...........................................................................................TTGAAACCTCCTAGAGAGCAA-----AAA--GG.....................................................................................................................................2650.603000000011010
............................................................................................................................................................................................................GGCCAAATTTTCGAATTTTTTGTAA............................25200.459000000000090
...........................................................................................TTGAAACCTCCTAGAGA.....................................................................................................................................................1750.201000000000001
..........................................................................................ATTGAAACCTCCTAGAGAGCAA-----AAA--GG.....................................................................................................................................2750.201000000100000
....................................................................................................................................................................................................TAATTTTTGGCCAAATTTTCGAATT....................................25200.102000000020000
.........................................................................................................................................................................................................TTTGGCCAAATTTTCGAATTTTTTGTAA............................28200.051000000000100
..........................................................................................................................................................................................................TTGGCCAAATTTTCGAATTTTTTGTAAAA..........................29200.051000000001000
..........................................................................................................................................................................................................TTGGCCAAATTTTCGAATTTTTTGTAA............................27200.051000000100000
........................................................................................................................................................................TCACTTT-TAAACTGATTTTGTAAAAT-T............................................................27200.051000000001000
droSec2
AAAATT---------AAT-------TTTTGGCCAAA-TTTTC-GAA-TT-TTTTGTA-AGGGGTACCATCATCAAAATT-TG--CAAAAAATTGAAACCTC-----CTAGAATTCCAAAACTTGAATGCAATTCGATTGGGATTC--------AAGAAACAACCCCTTTCACTTT-TAAACTGATTTTGTAAAAT-TAATTTTTGGCCAAAATC--------------------------AAATCATCAAAATTTGCSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
........................................................................................................................CTTGAATGCAATTCGATTGGGATTC--------AA......................................................................................................27200.1020002
.....................................TTTTC-GAA-TT-TTTTGTA-AGGGGTACCA.............................................................................................................................................................................................27200.0510001
...........................................................GGGGTACCATCATCAAAATT-TG--CA...........................................................................................................................................................................24200.0510001
.....................................TTTTC-GAA-TT-TTTTGTA-AGGGGTACC..............................................................................................................................................................................................26200.0510100
.................................................................................G--CAAAAAATTGAAACCTC-----CTAGAAT................................................................................................................................................25200.0510001
droEre2
AAAAAC---------GGA-------TTTCGGC-AAAAATT-CAAA--TATTTTTG-A-TG-GGCATTTTAATCATAACTTGG--CTAAAAATGATCG---T----AAAGAAA-----AAA--GAATAACTGTTTTGAGCAGCTAATTACCA-TTGCTAACGACCCCTATCACTTT-TTGACGGATTTTGGAAAAT-TAATTTTTCGGCCAATTTTCGCATTTTTTGTAA------------CATCATCAAAATTTGCSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
..................................................................TTTAATCATAACTTGG--CTAAAAATGATCG---.............................................................................................................................................................29200.051000010
droYak3
AAAACG---------A---------TTTTGGCCAAA-ATTTC-AAT--ATTTTCG-AATG--GTATTTTTGGTATAATTCGA--CTGAAAATGGTCA---T----AAAGCTA-----AAA--GAATAACATTTTTGTACTCCTAATTACCA-ATACTAACCAACCAAAACACTTT-TTGAGCGACTTTGTAAAAA-TAATTTTTGGCCAAATTTTCGCATTTTTTGTAA-----------AAATCATCAAAAATTGCSizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
.................................................................................................................................................................................................AA-TAATTTTTGGCCAAATTTTCGC.......................................24200.0510000010
............................................................................................................................................CCTAATTACCA-ATACTAACC................................................................................................20200.0510000001
droEug1
AAAACC---------GAT-------TTCTGAC-ACAAATTTT-CA-ATATTTTTT-A-AA--GTTTTCTAGCTATAACTTTATGAAAACAAACAGCA---A----GCAGCAA-----AAA--GAACGACTATTTTGTGCTGCTAACTACCA-AAACTTACTACCCCTATCACTCG-TTTTCCGATTTAGAGTAAT-TCATTTTTCATCCAAATTTCGCATTTTTGGTAAGGGGT------ACATCATCAAAATTTTCSizeHit CountTotal NormTotal
No Reads
droBia1
AAATTT----------------------AAGGCAAAAATAGG-A-ACT--TTTTA-G-TA-GAATTTTTGTTCCTAATTTCC--ATAAAAGAAGCGA---C----TCAGCCA-----AGA--TAAACACTGTTTTGATCAGCTAACAACCT-AAGCTAACGATCTGTATCACTTC-CGGGTAGATTTTCGGAAATCTAATTTTTGGCC-AATTTTTGATTTTTTTACAAGGGGTT-----GCATCGAAATTTTTTGCSizeHit CountTotal NormTotal
No Reads
droTak1
AAAAATTAAGATCTTGAT-------TTTTGGACAAAAATTTC-T-TAT--TTTCAAAATG--GGGTTTTTGATATAACTTGG--ACAAAAATTGTCT---A----AAATCAA-----AAA--GGCATACTGTTTTGTGCAGCTTACAACCGTATAATTAATATC-AGTGCACTTT-CCGACTGATTTCAGAAAAT-TAATTTTCGGCCCAATTTTCGCATTTTTGGTAAAA-------------AATGATTTTTTGCSizeHit CountTotal NormTotal
No Reads
droEle1
TTAATT---------TAT-------T-TGGGC-CAA-ATGTA-TA-GTT-TTTGC-TATG--GTTTTTTAGAAATATTTTTC--TCAAATGACAACC---C----ACAACTA-----AAA--GAAAGACTGTTCTACACAGCTGACAAGCT-AAACTAACGACCCTCATCACTTT-TTGGCTAATTTTGAATAAT-TAAAATTTTGCCCATTTTTCGATTTTTTTATAAGGGGTA-----ACATCATAATTTTTTGCSizeHit CountTotal NormTotal
No Reads
droRho1
TAAT----------------------TTTGGTCAAAAATTTC-C-GAG--TTTCAATACG--GGTATTTTGTTCTAACTTAG--CCCAAAAATGTCG---C----ACACCAA-----AAA--GAATAACCGTTTTGTGCAGCTGATGACCT-AAACTTTCAATCCCAAGT-----------CGATTTAAACATTTTTAATTTTGGACC-GATTTTTCATTTTTTTATAAGGGGTT-----AGGTCGTCATTATTTGCSizeHit CountTotal NormTotal
No Reads
droFic1
AAAGAT---------TTGTTGACAATTTTGGT-AAAAATCAC-TAT--ATTTTTA-G-TA--ATTTTTCGGTTGTAAAAAGG--AAAAATAGTGACT---T----ACAGCGG-----AAC--CAAATACTATTTTGAGCACCTTATGACCA-ATGTTAACAAGTCCTATCACTTT-TTAAACGATTTAAAAAAAA-TGATTTTTGGCCT-ATTTTTGCATTTTTGGTAAT-------------TTTCCATTTTTTGCSizeHit CountTotal NormTotal
No Reads
droKik1
AAAAAA---------AAT-------TTTCGATCGAT-TTTTT-CAA-AA-TTTGATA-AGGGGTACCATCATTAAAATT-TG--CAAAAAATCGAAAA--A----AATGAAATTTAAAATTCAGTATGCAGATTTATAGCCCTTATAAAAA-CTAGCACA-----AAACCGCTTTCCAAATTGATTTT----AAT-GCATTTTTGGCGAAATTACAGATTTTTTTAAATTTGGTT-----TTTTCCCAAAAATAATCSizeHit CountTotal NormTotal
No Reads
droWil2
AAAACG---------GAT-------T-TTG-CCAAAAAG-TT-GAT--ATTTACA-AACG--GAACTTTCGTCATAACTTCG--CTAAAAATTGTCT---T----ATAGAAG-----TAA--GAATAACTGTTTTGAGAAACTAATTACCA-GCGCTAACGATCCCTATTACTTT-TTGAAT-ATTTAGGGAAAT-TAGTTTTGGGTC-AATTTACGCATTTTTTGTAAGGGGATGAGGGGAGTCATTAAAACTTGTSizeHit CountTotal NormTotalV117
Male-body		V118
Embryo		V119
Head		M020
Head		M045
Female-body
..............................................................................................................................................TAATTACCA-GCGCTAACGATCCC...........................................................................................2311.00101000

Generated: 12/06/2013 at 02:34 PM