ID:

dsi_162

 Coordinate:

chr2h_Mrandom_024:141347-141411 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TTTTTTCACGTTTTTTCTTTTCACTTCGGGTGATTGTTTTTTGTTCGCGAATTCCGTCTCGCTCTCGCTCTATTTATTTACCCCTCTCCCGTTAGAGCGAGGGTCACAATATTCGGATATATATAATTACAAGGCGTAAGCCTCGGAGTATGATTAAATACTAAC
***********************************............(((((...((...((((((((((((....................)))))))))))).))...))))).************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Ovary		 M025
embryo
 SRR553487
Ovary		 SRR553486
Ovary		 SRR618934
Ovary		 SRR553488
Ovary		 O001
Testis
 M053
Female-body
..................................................ATTCCGTCTCGCTCTCGCTCTATT........................................................................................... 24 0 1 11.00 11 0 11 0 0 0 0 0 0
.....................CACTTCGGGTGATTGTTTTTTGTTCGC..................................................................................................................... 27 0 2 4.50 9 7 0 1 0 1 0 0 0
...............................................................................................................TTCGGATATATATAATTACAAGGCGTA........................... 27 0 1 4.00 4 1 0 1 2 0 0 0 0
.........................TCGGGTGATTGTTTTTTGTTCGCGAA.................................................................................................................. 26 0 2 2.50 5 0 0 4 0 0 1 0 0
.....................CACTTCGGGTGATTGTTTTTTGTT........................................................................................................................ 24 0 2 2.50 5 4 0 1 0 0 0 0 0
....TTCACGTTTTTTCTTTTCACTTCGGG....................................................................................................................................... 26 0 2 2.00 4 0 0 2 0 0 2 0 0
................................................................................................................TCGGATATATATAATTACAAGGCGTA........................... 26 0 1 2.00 2 1 0 0 0 0 1 0 0
...........................................................................................................................TAATTACAAGGCGTAAGCCTCGGAGT................ 26 0 20 1.55 31 19 0 0 0 7 4 0 1
...........................................................................................................................TAATTACAAGGCGTAAGCCTCGGAGTA............... 27 0 20 1.35 27 10 0 8 0 8 0 0 1
...........................................................................................................................TAATTACAAGGCGTAAGCCTCGGA.................. 24 0 20 1.20 24 13 0 10 0 1 0 0 0
............................................................................................................................AATTACAAGGCGTAAGCCTCGGAGTA............... 26 0 20 1.10 22 0 0 0 0 0 0 22 0
..............................TGATTGTTTTTTGTTCGC..................................................................................................................... 18 0 2 1.00 2 0 0 0 0 0 0 2 0
...........................................................................................TTAGAGCGAGGGTCACAATATTCGGA................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................GGGTGATTGTTTTTTGTTCGCGAA.................................................................................................................. 24 0 2 1.00 2 0 0 1 1 0 0 0 0
..................................................................................................GAGGGTCACAATATTCGGATATATA.......................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................TAGAGCGAGGGTCACAATATTCGGATA.............................................. 27 0 1 1.00 1 0 0 0 0 0 1 0 0
............................................................................TTTACCCCTCTCCCGTTAGAGCGAG................................................................ 25 0 1 1.00 1 0 0 0 0 1 0 0 0
............................................................................................TAGAGCGAGGGTCACAATATTCGGATATA............................................ 29 0 1 1.00 1 0 0 1 0 0 0 0 0
........................................................................................................................................TAAGCCTCGGAGTATGATTAAATACTAAC 29 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................TATTCGGATATATATAATTACAAGGCG............................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0
.....................CACTTCGGGTGATTGTTTTTTGTTCG...................................................................................................................... 26 0 2 1.00 2 1 0 1 0 0 0 0 0
..............................TGATTGTTTTTTGTTCGCGAATTC............................................................................................................... 24 0 2 1.00 2 0 0 2 0 0 0 0 0
.............................................................................................................................................CTCGGAGTATGATTAAATACTAAC 24 0 1 1.00 1 0 0 0 1 0 0 0 0
.................................................................................................CGAGGGTCACAATATTCGGATATATA.......................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0
........CGTTTTTTCTTTTCACTTCGG........................................................................................................................................ 21 0 2 1.00 2 0 0 0 0 0 0 2 0
................................ATTGTTTTTTGTTCGCGAATT................................................................................................................ 21 0 2 1.00 2 2 0 0 0 0 0 0 0
...............................................................................................................TTCGGATATATATAATTACAAGGCGT............................ 26 0 1 1.00 1 0 0 0 0 0 1 0 0
............................................................................TTTACCCCTCTCCCGTTAGAGCGAGG............................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0
.................................................................................................................CGGATATATATAATTACAAGGCGTA........................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................TTTGTTCGCGAATTCCGTC........................................................................................................... 19 0 5 1.00 5 0 0 0 0 0 0 5 0
.............................................................................................................TATTCGGATATATATAATTACAAGGCGTA........................... 29 0 1 1.00 1 0 0 0 1 0 0 0 0
.............................................................................................................TATTCGGATATATATAATTACAAGGC.............................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................TGTTCGCGAATTCCGTCTCGCTCTCGCTA............................................................................................... 29 1 1 1.00 1 0 0 0 1 0 0 0 0
...........................................................................................................................TAATTACAAGGCGTAAGCCTCGGAG................. 25 0 20 0.60 12 2 1 3 0 4 0 0 2
....................................TTTTTTGTTCGCGAATTCCGTCTCG........................................................................................................ 25 0 5 0.60 3 1 0 1 1 0 0 0 0
.....................CACTTCGGGTGATTGTTTTTTGTTCGA..................................................................................................................... 27 1 2 0.50 1 0 0 1 0 0 0 0 0
..........................CGGGTGATTGTTTTTTGTTCGCGA................................................................................................................... 24 0 2 0.50 1 0 0 1 0 0 0 0 0
...TTTCACGTTTTTTCTTTTCACTTCGGG....................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0 0 0 0
.TTTTTCACGTTTTTTCTTTTCACTT........................................................................................................................................... 25 0 2 0.50 1 0 0 0 0 1 0 0 0
............................GGTGATTGTTTTTTGTTCGC..................................................................................................................... 20 0 2 0.50 1 0 0 0 0 1 0 0 0
...............................GATTGTTTTTTGTTCGCGAA.................................................................................................................. 20 0 2 0.50 1 0 0 0 0 1 0 0 0
.....................CACTTCGGGTGATTGTTTTTTGTTCGCGA................................................................................................................... 29 0 2 0.50 1 1 0 0 0 0 0 0 0
...........................................................................................................................TAATTACAAGGCGTAAGCCTCGG................... 23 0 20 0.50 10 3 0 4 0 3 0 0 0
..............................TGATTGTTTTTTGTTCGCGAAA................................................................................................................. 22 1 2 0.50 1 1 0 0 0 0 0 0 0
.....TCACGTTTTTTCTTTTCACTTCGGGTG..................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0 0 0 0
.....................CACTTCGGGTGATTGTTTTTTGTTCGCG.................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0 0 0 0
..............................TGATTGTTTTTTGTTCGCGAATTCCGTC........................................................................................................... 28 0 2 0.50 1 0 0 0 0 1 0 0 0
....TTCACGTTTTTTCTTTTCACT............................................................................................................................................ 21 0 2 0.50 1 0 0 0 0 1 0 0 0
TTTTTTCACGTTTTTTCTTTTCACT............................................................................................................................................ 25 0 2 0.50 1 0 0 0 1 0 0 0 0
........................................................................................................................................TAAGCCTCGGAGTATGATTAATTA..... 24 1 2 0.50 1 0 0 0 1 0 0 0 0
.....................CACTTCGGGTGATTGTTTTTTGTTC....................................................................................................................... 25 0 2 0.50 1 0 0 1 0 0 0 0 0
.....TCACGTTTTTTCTTTTCACTTCGGG....................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0
...............................................................................................................................TACAAGGCGTAAGCCTCGGAGTATGATT.......... 28 0 20 0.45 9 5 0 0 3 1 0 0 0
.........................................................................................................................TATAATTACAAGGCGTAAGCCTCGGA.................. 26 0 20 0.35 7 0 0 0 6 0 1 0 0
................................................................................................GCGAGGGTCACAATATTCGGGTATA............................................ 25 1 3 0.33 1 0 0 0 0 0 1 0 0
.......................................................................................................................TATATAATTACAAGGCGTAAGCCTCGG................... 27 0 3 0.33 1 0 0 0 1 0 0 0 0
........................................................................................................................................TAAGCCTCGGAGTATGATTAAA....... 22 0 6 0.33 2 0 0 1 1 0 0 0 0
.................TTTTCACTTCGGGTGATT.................................................................................................................................. 18 0 10 0.30 3 0 0 0 0 3 0 0 0
...............................................................................................................TTCGGGTATATATAATTACAAGGCGTA........................... 27 1 4 0.25 1 0 0 0 0 0 1 0 0
...................................................................................................AGGGTCACAATATTCGGGTATATATA........................................ 26 1 4 0.25 1 0 0 0 0 0 1 0 0
......................................TTTTGTTCGCGAATTCCGTCTCGC....................................................................................................... 24 0 5 0.20 1 0 0 0 0 1 0 0 0
.....................................TTTTTGTTCGCGAATTCCGTCTC......................................................................................................... 23 0 5 0.20 1 0 0 0 1 0 0 0 0
..................................................................................................................................AAGGCGTAAGCCTCGGAGTATGATT.......... 25 0 20 0.20 4 0 0 0 4 0 0 0 0
..................................TGTTTTTTGTTCGCGAATTCCGTCT.......................................................................................................... 25 0 5 0.20 1 0 0 0 0 0 0 0 1
............................................TCGCGAATTCCGTCTCGC....................................................................................................... 18 0 5 0.20 1 0 0 0 0 1 0 0 0
........................................TTGTTCGCGAATTCCGTCTCG........................................................................................................ 21 0 5 0.20 1 0 0 0 1 0 0 0 0
.....................................TTTTTGTTCGCGAATTCCGTCTCGC....................................................................................................... 25 0 5 0.20 1 0 0 0 1 0 0 0 0
...............TCTTTTCACTTCGGGTGATT.................................................................................................................................. 20 0 5 0.20 1 0 0 0 0 1 0 0 0
.........................................................................................................................TATAATTACAAGGCGTAAGCCTCGGAG................. 27 0 20 0.20 4 0 0 0 2 2 0 0 0
.....................................TTTTTGTTCGCGAATTCCGTCTCG........................................................................................................ 24 0 5 0.20 1 0 0 0 0 1 0 0 0
..................................TGTTTTTTGTTCGCGAATTCCGTCTC......................................................................................................... 26 0 5 0.20 1 1 0 0 0 0 0 0 0
........................................................................................................................................TAAGCCTCGGAGTATGTATAAA....... 22 2 6 0.17 1 0 0 0 1 0 0 0 0
...............................................................................................................................TACAAGGCGTAAGCCTCGGAGT................ 22 0 20 0.15 3 1 0 0 0 2 0 0 0
........................................TTGTTCGCGAATTCCGG............................................................................................................ 17 1 7 0.14 1 0 0 0 0 1 0 0 0
........................................................................................................................................TAAGCCTCGGAGTATGTTAAAC....... 22 3 7 0.14 1 0 0 0 1 0 0 0 0
.....................CACTTCGGGTGATTTTTTTTTGTCCG...................................................................................................................... 26 2 7 0.14 1 0 0 1 0 0 0 0 0
.....................CACTTCGGGTGATTTTTTTTTGTC........................................................................................................................ 24 2 8 0.13 1 0 0 1 0 0 0 0 0
..........TTTTTTCTTTTCACTTCG......................................................................................................................................... 18 0 8 0.13 1 0 0 0 0 1 0 0 0
..............TTCTTTTCACTTCGGGT...................................................................................................................................... 17 0 8 0.13 1 0 0 0 0 1 0 0 0
.........................TCGGGTGATTGTTTTTTGTGCGCAAA.................................................................................................................. 26 2 8 0.13 1 1 0 0 0 0 0 0 0
.....................CACTTCGGGTGATTGTTTTTTGT......................................................................................................................... 23 0 8 0.13 1 1 0 0 0 0 0 0 0
..............................TGATTTTTTTTTGTCCGCGAATTCCG............................................................................................................. 26 2 9 0.11 1 1 0 0 0 0 0 0 0
..................TTTCACTTCGGGTGATT.................................................................................................................................. 17 0 10 0.10 1 0 0 0 0 1 0 0 0
...........................................................................................................................TAATTACAAGGCGTAAGC........................ 18 0 20 0.10 2 0 0 0 0 2 0 0 0
...........................................................................................................................TAATTACAAGGCGTAAGCCTCGGAT................. 25 1 20 0.10 2 1 0 1 0 0 0 0 0
.......................CTTCGGGTGATTGTT............................................................................................................................... 15 0 10 0.10 1 0 0 0 0 1 0 0 0
.........................................................................................................................TATAATTACAAGGCGTA........................... 17 0 20 0.10 2 1 0 0 0 1 0 0 0
..................TTTCACTTCGGGTGATC.................................................................................................................................. 17 1 10 0.10 1 0 0 0 0 1 0 0 0
.......................CTTCGGGTGATTGTTTT............................................................................................................................. 17 0 10 0.10 1 0 0 0 0 1 0 0 0
.............GTTCGTTTCACGTCGGGT...................................................................................................................................... 18 3 20 0.10 2 0 0 2 0 0 0 0 0
..............TTCGTTTCACGTCGGGT...................................................................................................................................... 17 2 15 0.07 1 1 0 0 0 0 0 0 0
.......................................................................................CCGGTTAGAGCGACGG.............................................................. 16 2 16 0.06 1 1 0 0 0 0 0 0 0
...................................................................................................................................AGGCGTAAGCCTCGGAGTATGATT.......... 24 0 20 0.05 1 0 0 0 1 0 0 0 0
......................................................................................................................................CGTAAGCCTCGGAGTATGA............ 19 0 20 0.05 1 0 0 0 0 1 0 0 0
...........................................................................................................................TAATTACAAGGCGTAAGCCTCGGAGA................ 26 1 20 0.05 1 0 0 0 0 1 0 0 0
.............................................................................................................................ATTACAAGGCGTAAGCCTCGGAGTAA.............. 26 1 20 0.05 1 0 0 0 0 1 0 0 0
..........................................................................................................................ATAATTACAAGGCGTAAGCCTCGG................... 24 0 20 0.05 1 0 0 0 0 0 0 0 1
.....................................................................................................................................GCGTAGGCCTCGGAGTA............... 17 1 20 0.05 1 0 0 0 0 1 0 0 0
...............................................................................................................................TACAAGGCGTAAGCCTCGGAGTATGA............ 26 0 20 0.05 1 1 0 0 0 0 0 0 0
............................................................................................................................AATTACAGGGCGTAA.......................... 15 1 20 0.05 1 0 0 0 0 0 1 0 0
...................................................................................................................................AGGCGTAAGCCTCGGAGTATG............. 21 0 20 0.05 1 0 0 0 0 1 0 0 0
...........................................................................................................................TAATTACAAGGCGTAAGCCTCGGAGCA............... 27 1 20 0.05 1 0 0 0 0 1 0 0 0
...................................................................................................................................AGGCGTAAGCCTCGGAG................. 17 0 20 0.05 1 0 0 0 0 1 0 0 0
...................................................................................................................................AGGCGTAAGCCTCGGAGTATGAT........... 23 0 20 0.05 1 0 0 0 0 1 0 0 0
...............................................................................................................................TACAAGGCGTAAGCCTCGGAGTATGAT........... 27 0 20 0.05 1 0 0 0 0 1 0 0 0
..........................................................................................................................ATAATTACAAGGCGTAAGCCTCGGA.................. 25 0 20 0.05 1 0 0 1 0 0 0 0 0
...............................................................................................................................TACAAGGCGTAAGCCTCGGAGTATG............. 25 0 20 0.05 1 0 0 0 0 1 0 0 0
..................................................................................................................................AAGGCGTAAGCCTCGGAGTATGATG.......... 25 1 20 0.05 1 0 0 0 0 1 0 0 0
................................................................................................................................ACAAGGCGTAAGCCTCGGAG................. 20 0 20 0.05 1 0 0 0 0 1 0 0 0
.................................................................................................................................CAAGGCGTAAGCCTCGGAGTATGATT.......... 26 0 20 0.05 1 0 0 0 1 0 0 0 0
................................................................................................................................ACAAGGCGTAAGCCTCGGAGTATGATT.......... 27 0 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................................................................................TAATTACAAGGCGTAAGCCTCAGAGT................ 26 1 20 0.05 1 0 0 0 0 0 1 0 0
...................................................................................................................................AGGCGTAAGCCTCGGA.................. 16 0 20 0.05 1 0 0 0 0 1 0 0 0
.........................................................................TTATTTACCACTCTCCCGTTAGAGCGA................................................................. 27 1 20 0.05 1 1 0 0 0 0 0 0 0
................................................................................................GCGAGGGTCACAATAT..................................................... 16 0 20 0.05 1 0 0 0 0 1 0 0 0
.......................................................................ATTTATATACCCCTC............................................................................... 15 1 20 0.05 1 0 0 0 0 1 0 0 0
...............TCTTTTCACGTCGGGTT..................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 1 0 0
...............................................................................................................................TACAAGGCGTAAGCCTCGG................... 19 0 20 0.05 1 0 0 0 0 1 0 0 0
...............................................................................................................................TACAAGGCGTAAGCCTCGGAGTATGAA........... 27 1 20 0.05 1 0 0 0 0 1 0 0 0
..................................................................................................................................AAGGCGTAAGCCTCGGAGT................ 19 0 20 0.05 1 0 0 0 0 1 0 0 0
..................................................................................................................................AAGGCGTAAGCCTCGGAGTA............... 20 0 20 0.05 1 0 0 0 0 1 0 0 0
..................................................................................................................GGATATCTATAATGACGAG................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0
........................................................................................................................................TAAGCCTCGGAGTATGATT.......... 19 0 20 0.05 1 0 0 0 0 1 0 0 0
..............................................................................................................................TTACAAGGCGTAAGCCTCGGAGT................ 23 0 20 0.05 1 0 0 0 0 1 0 0 0
...............................................................................................................................TACAAGGCGTAAGCCTCGGA.................. 20 0 20 0.05 1 0 0 0 0 1 0 0 0
...........................................................................................................................TAATTACAAGGCGTAAGCCTTGGA.................. 24 1 20 0.05 1 1 0 0 0 0 0 0 0

Anti-sense strand reads

GTTAGTATTTAATCATACTCCGAGGCTTACGCCTTGTAATTATATATATCCGAATATTGTGACCCTCGCTCTAACGGGAGAGGGGTAAATAAATAGAGCGAGAGCGAGACGGAATTCGCGAACAAAAAACAATCACCCGAAGTGAAAAGAAAAAACGTGAAAAAA
*************************************************.(((((...((.((((((((((((....................))))))))))))...))...)))))............*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Ovary		 SRR553486
Ovary		 SRR553487
Ovary		 SRR553488
Ovary		 SRR618934
Ovary		 M025
embryo
 O001
Testis
 M053
Female-body
..................................................................................GGGTAAATAAATAGAGCGAGAGCGAGA........................................................ 27 0 1 5.00 5 3 0 2 0 0 0 0 0
......................................................................................................................................ACCCGAAGTGAAAAGAAAAAACGTGA..... 26 0 2 5.00 10 8 0 1 1 0 0 0 0
......................................................TATTGTGACCCTCGCTCTAACGGGAGA.................................................................................... 27 0 1 4.00 4 1 2 0 0 1 0 0 0
........................................................TTGTGACCCTCGCTCTAACGGGAGA.................................................................................... 25 0 1 4.00 4 2 0 0 0 1 0 0 1
...........................TACGCCTTGTAATTATATATATCCGAATA............................................................................................................. 29 0 1 2.00 2 1 1 0 0 0 0 0 0
................................CTTGTAATTATATATATCCGAATA............................................................................................................. 24 0 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................CGCGAACAAAAAACAATCACCCGAAGTGA.................... 29 0 2 1.50 3 2 1 0 0 0 0 0 0
...........................................................TGCCCCTCGCTCTAA........................................................................................... 15 1 5 1.40 7 0 7 0 0 0 0 0 0
..........AATCATACTCCGAGGCTTAC....................................................................................................................................... 20 0 20 1.10 22 0 0 0 0 0 0 22 0
.............................................ATATCCGAAGATTGTTACCCGC.................................................................................................. 22 3 1 1.00 1 0 0 0 0 0 0 0 0
.................................................................TCGCTCTAACGGGAGAG................................................................................... 17 0 1 1.00 1 0 0 0 0 1 0 0 0
......................................................TATTGTGACCCTCGCTCTAACGGGA...................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0
.........................................................................................TAAATAGAGCGAGAGCGAGACGGAATT................................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0
....................................................AATATTGTGACCCTCGCTCTAACGGGA...................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................TAGAGCGAGAGCGAGACGGAATT................................................. 23 0 1 1.00 1 0 0 0 1 0 0 0 0
............................................................................................................ACGGAATTCGCGAACAAAA...................................... 19 0 5 1.00 5 0 0 0 0 0 0 5 0
..................................................................................GGGTAAATAAATAGAGCGAGAGCGCT......................................................... 26 2 1 1.00 1 0 0 0 0 1 0 0 0
.................................................................TCGCTCTAACGGGAGAGGGGTAAATA.......................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................TACGCCTTGTAATTATATATATCCGAA............................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0
......................................................................................................................................ACCCGAAGTGAAAAGAAAAAACGTGAA.... 27 0 2 1.00 2 2 0 0 0 0 0 0 0
...................................................GAATATTGTGACCCTCGCTCTAACGGGA...................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0
..................................TGTAATTATATATATCCGAATATTGTGA....................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0
..........................TTACGCCTTGTAATTATATATATCCGAATA............................................................................................................. 30 0 1 1.00 1 0 1 0 0 0 0 0 0
.........................................................TGTGACCCTCGCTCTAACGGGAGA.................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................GGGTAAATAAATAGAGCGAGAGCGT.......................................................... 25 1 1 1.00 1 0 0 0 0 1 0 0 0
........................................................TTGTGACCCTCGCTCTAACGGGAGAG................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0
.........................................................................................TAAATAGAGCGAGAGCGAGACGGAA................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0
.................................................................................................GCGAGAGCGAGACGGAATTCGCGAACA......................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0
..................................................................................GGGTAAATAAATAGAGCGAGAGCGA.......................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0
.........................................................................................................GAGACGGAATTCGCGAACAAAAAAC................................... 25 0 5 0.80 4 0 0 0 0 0 4 0 0
.........................................................................................................GAGACGGAATTCGCGAACAAAAAACAAT................................ 28 0 2 0.50 1 0 0 0 0 0 0 0 1
.............................................................................................................CGGAATTCGCGAACAAAAAACAATCAC............................. 27 0 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................................................................TCACCCGAAGTGAAAAGAAAAAACGTGA..... 28 0 2 0.50 1 1 0 0 0 0 0 0 0
.............................................................................................................CGGAATTCGCGAACAAAAAACAATCACC............................ 28 0 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................................................CGCGAACAAGGAACAATCACC............................ 21 2 2 0.50 1 0 0 0 0 0 0 0 0
................................................................................................................AATTCGCGAACAAAAAACAATCACCCGA......................... 28 0 2 0.50 1 0 1 0 0 0 0 0 0
..................................................................................................................TTCGCGAACAAAAAACAATCACCCGAA........................ 27 0 2 0.50 1 0 0 0 0 0 1 0 0
.............................................................................................................CGGAATTCGCGAACAAAAAACAAT................................ 24 0 2 0.50 1 0 0 0 0 0 0 0 1
...........................................................................................................GACGGAATTCGCGAACAAAAAACAAT................................ 26 0 2 0.50 1 0 0 1 0 0 0 0 0
..................................................................................................................TTCGCGAACAAAAAACAATCACCCGA......................... 26 0 2 0.50 1 0 1 0 0 0 0 0 0
.....................................................................................................................................CACCCGAAGTGAAAAGAAAAAACGTGA..... 27 0 2 0.50 1 0 1 0 0 0 0 0 0
......................................................................................................................................ACCCGAAGTGAAAAGAAAAAACGTG...... 25 0 2 0.50 1 0 0 0 0 1 0 0 0
....................................................................................................................CGCGAACAAAAAACAATCACCCGAAGTGT.................... 29 1 2 0.50 1 1 0 0 0 0 0 0 0
..................................................................................................................TTCGCGAACAAAAAACAATCACCCG.......................... 25 0 2 0.50 1 0 1 0 0 0 0 0 0
.........................................................................................................GAGACGGAATTCGCGAACAAAAAACA.................................. 26 0 5 0.40 2 0 1 0 0 0 1 0 0
...............................................ATCGGAATTTTTTGACCCTC.................................................................................................. 20 3 3 0.33 1 1 0 0 0 0 0 0 0
...........................................................TGTCCCTCGCTCTAA........................................................................................... 15 1 4 0.25 1 0 1 0 0 0 0 0 0
...........................TACGCCTTGTAATTATATATACCCGAATA............................................................................................................. 29 1 4 0.25 1 0 1 0 0 0 0 0 0
...........................................................................................................................AAAAAACAATCACCCGAAGTGAAAAGA............... 27 0 4 0.25 1 0 1 0 0 0 0 0 0
................ACTCCGAGGCTTACGC..................................................................................................................................... 16 0 20 0.15 3 0 0 0 0 3 0 0 0
.........TAATCATACTTCGAGGCTTACGCTCT.................................................................................................................................. 26 3 7 0.14 1 1 0 0 0 0 0 0 0
...........................................................................................................................AATAAACAATCACCCGAAGCGA.................... 22 2 9 0.11 1 0 0 1 0 0 0 0 0
............................................................................................................ACGGAATTCGCGGACAAAAAAAAATC............................... 26 2 9 0.11 1 0 1 0 0 0 0 0 0
..........................................................................................................................TAATAAACAATCACCCGAAGCGA.................... 23 3 9 0.11 1 0 0 1 0 0 0 0 0
...........................................................................................................GACGGAATTCGCGGACAAAAAAAAAT................................ 26 2 10 0.10 1 0 1 0 0 0 0 0 0
...............TACTCCGAGGCTTACGC..................................................................................................................................... 17 0 20 0.10 2 0 0 0 0 2 0 0 0
.........TAATCTTGCTCCGAGCCTT......................................................................................................................................... 19 3 19 0.05 1 0 0 0 0 0 0 0 1
..................................................................CGTTCTAACGGGAGAGTGGTAAATAAATA...................................................................... 29 2 20 0.05 1 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 chr2h_Mrandom_024:141297-141461 + dsi_162 TTTTTT--CACGTTTTTTCTTTTCACTTCGGGTGATTGTTTTTTGT-TCGCGAATT---CCGTCTCGC----------------------------------------------------TCTCGCTC----TATTTATTTACCCCTCTCCCGTTAGAGCGAGGG-TCACAATATT---CG-GA--------TATA-TATA-ATTACAAGGCGTAAGCCTCGGAGT-ATGATTAAATACTAAC
droSec2 scaffold_7192:1182-1395 - TTTTTT--CACTTTTTATCTTTTCACTTCGGGTGATTGTTTTTTTTCTCGCGAATT---CCGTCTCGCGTGAGTCCGATTTCTTCGTTGGGCGACAATTATAAGTCGTTTGTTTAG----TTTGGTTA----TATTTATTTACCACTCTCCCGTTAGGGCGAGGG-TCACAATATT---TG-GG--------TATT-TATA-ATTACAAGGCGTAAGCCTCGGAGT-ATGATTTAAAACTAAC
dm3 chrUextra:6759296-6759492 + TTTTTT--CA---------------CTTCGGGCTATTGTTTTTAGT-TCGCAAATT---TCGTATCGCGTGAGTCCGATTTCTTCGTTGGGTGACAATTATAAGTCGTTGG-TTAA----TTTAATGA----TATTTATTTACCACTCTCCCGTTAGGGCGAGGG-TCACAATATT---TG-GG--------TATT-TATA-ATTACAAGGCGTAAGCCTCGGAGT-ATGATTAAAAACTAAC
droYak3 chr2h:611006-611178 + GTTTTT--TATATCCCC-----------------------------------AATTAGACCTTCTCG-GCGGGTTCG--TGC--CGTTGGGCGACAATTATAAGTCGTT---TTAA----GTTGAT-T----TATTTAT-TACCACTCTCCCGTTAGGGCGAGGG-TCTTAATATT---------TTATGTAGGTT-TATA-A-TACGAGGCGTAAGCCACGGAGT-ATGATTTATAACTGA-
droEug1 scf7180000408831:28341-28461 + TTTTTT--CTTACTTTCA-------C-----------------------------------------------------------------------------------------------------T----TTTTTATTTCCCCTAAACCTGTTAAGGTAAAGG-ATGGTATAAA---TG-GATTTATGATAATT-ATTT-ATTACACAGCTATGGCTGCGGAGT-ACGATTTTAGACTAAC
droBia1 scf7180000302512:147342-147446 - T------------------------------------------------------------------------------------------------------------------------------------ATTTATTT-TCCAAAACCTCTTAAGGCAAGGA-TAA-GATACATTGTTGGGTTA-CAATGGTAGTAAG-ATTACGCAGCTAAGGCTACGGAGT-ATAATTTTAGACTAAC
droEle1 scf7180000488503:23249-23422 + TTTTTAGTGAGATTCTTTATTTTCACGT----------------------------------------------------------TAGGGCGCCAAGTACTTTTTGTTCGTTTTGTATTTTTGTCTATTTTTATTTACTACTCCCTAGCCTGTTTAAGCAAAGG-GTTAGATAAAT-------ATA-CAAAGGGT-TATC-TTAACACAGCTATGGCTGCGGATTACCAAACCTAGACTAAC
droRho1 scf7180000777239:19900-19992 - T------------------------------------------------------------------------------------------------------------------------------------ATTTATTTCTCCTAAACCTGTTAAGGTAGAGGATAAACAAGTC---TT-GA----------TT-TACA-A-AACACAGCTAAGCATGCGGAGT-ACAATTTTAGACTAAC
droFic1 scf7180000452073:7710-7730 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGAGT-GTAATT-AAGACTAAT
droKik1 scf7180000299739:27478-27581 - TC----------------------------------------------------------------------------------------------------------------------------------CGTTTATTAGTCTTAGACCCGTTAGGGCAAGAT-ATAAAATCAGT-------ATTACAGAGATT-ATTAATTTACACAGCTAAGGCTGTGGAGTTACGATTAAAAACTAAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
TTTTTT--CACGTTTTTTCTTTTCACTTCGGGTGATTGTTTTTTGT-TCGCGAATT---CCGTCTCGC----------------------------------------------------TCTCGCTC----TATTTATTTACCCCTCTCCCGTTAGAGCGAGGG-TCACAATATT---CG-GA--------TATA-TATA-ATTACAAGGCGTAAGCCTCGGAGT-ATGATTAAATACTAACSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
.....................................................ATT---CCGTCTCGC----------------------------------------------------TCTCGCTC----TATT...........................................................................................................24111.00110001100000000
.......................CACTTCGGGTGATTGTTTTTTGT-TCGC................................................................................................................................................................................................2724.509000000070101
..............................................................................................................................................................................TT---CG-GA--------TATA-TATA-ATTACAAGGCGTA............................2714.004000000012100
...........................TCGGGTGATTGTTTTTTGT-TCGCGAA.............................................................................................................................................................................................2622.505000000000410
.......................CACTTCGGGTGATTGTTTTTTGT-T...................................................................................................................................................................................................2422.505000000040100
....TT--CACGTTTTTTCTTTTCACTTCGGG...................................................................................................................................................................................................................2622.004000000000220
...............................................................................................................................................................................T---CG-GA--------TATA-TATA-ATTACAAGGCGTA............................2612.002000000010010
.......................................................................................................................................................................................................TA-ATTACAAGGCGTAAGCCTCGGAGT-................26201.55310000001190047
.......................................................................................................................................................................................................TA-ATTACAAGGCGTAAGCCTCGGAGT-A...............27201.35270000001100808
.......................................................................................................................................................................................................TA-ATTACAAGGCGTAAGCCTCGGA...................24201.202400000001301001
........................................................................................................................................................................................................A-ATTACAAGGCGTAAGCCTCGGAGT-A...............26201.10220000220000000
................................TGATTGTTTTTTGT-TCGC................................................................................................................................................................................................1821.002000020000000
.........................................................................................................................................................TTAGAGCGAGGG-TCACAATATT---CG-GA--------...................................................2611.001000000010000
.............................GGGTGATTGTTTTTTGT-TCGCGAA.............................................................................................................................................................................................2421.002000000001100
................................................................................................................................................................GAGGG-TCACAATATT---CG-GA--------TATA-TA............................................2511.001000000010000
..........................................................................................................................................................TAGAGCGAGGG-TCACAATATT---CG-GA--------TA.................................................2711.001000000000010
..........................................................................................................................................TTTACCCCTCTCCCGTTAGAGCGAG................................................................................2511.001000000000001
..........................................................................................................................................................TAGAGCGAGGG-TCACAATATT---CG-GA--------TATA-..............................................2911.001000000000100
.....................................................................................................................................................................................................................TAAGCCTCGGAGT-ATGATTAAATACTAAC2911.001000000010000
............................................................................................................................................................................TATT---CG-GA--------TATA-TATA-ATTACAAGGCG..............................2711.001000000001000
.......................CACTTCGGGTGATTGTTTTTTGT-TCG.................................................................................................................................................................................................2621.002000000010100
................................TGATTGTTTTTTGT-TCGCGAATT---C.......................................................................................................................................................................................2421.002000000000200
..........................................................................................................................................................................................................................CTCGGAGT-ATGATTAAATACTAAC2411.001000000001000
...............................................................................................................................................................CGAGGG-TCACAATATT---CG-GA--------TATA-TA............................................2611.001000000001000
..........CGTTTTTTCTTTTCACTTCGG....................................................................................................................................................................................................................2121.002000020000000
..................................ATTGTTTTTTGT-TCGCGAATT---........................................................................................................................................................................................2121.002000000020000
..............................................................................................................................................................................TT---CG-GA--------TATA-TATA-ATTACAAGGCGT.............................2611.001000000000010
..........................................................................................................................................TTTACCCCTCTCCCGTTAGAGCGAGG...............................................................................2611.001000000000010
...................................................................................................................................................................................CG-GA--------TATA-TATA-ATTACAAGGCGTA............................2511.001000000010000
.........................................TTTGT-TCGCGAATT---CCGTC...................................................................................................................................................................................1951.005000050000000
............................................................................................................................................................................TATT---CG-GA--------TATA-TATA-ATTACAAGGCGTA............................2911.001000000001000
............................................................................................................................................................................TATT---CG-GA--------TATA-TATA-ATTACAAGGC...............................2611.001000000010000
.......................................................................................................................................................................................................TA-ATTACAAGGCGTAAGCCTCGGAG..................25200.6012000100220304
......................................TTTTTTGT-TCGCGAATT---CCGTCTCG................................................................................................................................................................................2550.603000000011100
............................CGGGTGATTGTTTTTTGT-TCGCGA..............................................................................................................................................................................................2420.501000000000100
...TTT--CACGTTTTTTCTTTTCACTTCGGG...................................................................................................................................................................................................................2720.501000000010000
.TTTTT--CACGTTTTTTCTTTTCACTT.......................................................................................................................................................................................................................2520.501000000000001
..............................GGTGATTGTTTTTTGT-TCGC................................................................................................................................................................................................2020.501000000000001
.................................GATTGTTTTTTGT-TCGCGAA.............................................................................................................................................................................................2020.501000000000001
.......................CACTTCGGGTGATTGTTTTTTGT-TCGCGA..............................................................................................................................................................................................2920.501000000010000
.......................................................................................................................................................................................................TA-ATTACAAGGCGTAAGCCTCGG....................23200.5010000000030403
.....T--CACGTTTTTTCTTTTCACTTCGGGTG.................................................................................................................................................................................................................2720.501000000010000
.......................CACTTCGGGTGATTGTTTTTTGT-TCGCG...............................................................................................................................................................................................2820.501000000010000
................................TGATTGTTTTTTGT-TCGCGAATT---CCGTC...................................................................................................................................................................................2820.501000000000001
....TT--CACGTTTTTTCTTTTCACT........................................................................................................................................................................................................................2120.501000000000001
TTTTTT--CACGTTTTTTCTTTTCACT........................................................................................................................................................................................................................2520.501000000001000
.......................CACTTCGGGTGATTGTTTTTTGT-TC..................................................................................................................................................................................................2520.501000000000100
.....T--CACGTTTTTTCTTTTCACTTCGGG...................................................................................................................................................................................................................2520.501000000010000
............................................................................................................................................................................................................TACAAGGCGTAAGCCTCGGAGT-ATGATT..........28200.459000000053001
.....................................................................................................................................................................................................TATA-ATTACAAGGCGTAAGCCTCGGA...................26200.357000000006010
..................................................................................................................................................................................................TA-TATA-ATTACAAGGCGTAAGCCTCGG....................2730.331000000001000
.....................................................................................................................................................................................................................TAAGCCTCGGAGT-ATGATTAAA.......2260.332000000001100
...................TTTTCACTTCGGGTGATT..............................................................................................................................................................................................................18100.303000000000003
........................................TTTTGT-TCGCGAATT---CCGTCTCGC----------------------------------------------------...........................................................................................................................2450.201000000000001
.......................................TTTTTGT-TCGCGAATT---CCGTCTC.................................................................................................................................................................................2350.201000000001000
...............................................................................................................................................................................................................AAGGCGTAAGCCTCGGAGT-ATGATT..........25200.204000000004000
....................................TGTTTTTTGT-TCGCGAATT---CCGTCT..................................................................................................................................................................................2550.201000000100000
...............................................TCGCGAATT---CCGTCTCGC----------------------------------------------------...........................................................................................................................1850.201000000000001
..........................................TTGT-TCGCGAATT---CCGTCTCG................................................................................................................................................................................2150.201000000001000
.......................................TTTTTGT-TCGCGAATT---CCGTCTCGC----------------------------------------------------...........................................................................................................................2550.201000000001000
.................TCTTTTCACTTCGGGTGATT..............................................................................................................................................................................................................2050.201000000000001
.....................................................................................................................................................................................................TATA-ATTACAAGGCGTAAGCCTCGGAG..................27200.204000000002002
.......................................TTTTTGT-TCGCGAATT---CCGTCTCG................................................................................................................................................................................2450.201000000000001
....................................TGTTTTTTGT-TCGCGAATT---CCGTCTC.................................................................................................................................................................................2650.201000000010000
............................................................................................................................................................................................................TACAAGGCGTAAGCCTCGGAGT-................22200.153000000010002
............TTTTTTCTTTTCACTTCG.....................................................................................................................................................................................................................1880.131000000000001
................TTCTTTTCACTTCGGGT..................................................................................................................................................................................................................1780.131000000000001
.......................CACTTCGGGTGATTGTTTTTTGT-....................................................................................................................................................................................................2380.131000000010000
....................TTTCACTTCGGGTGATT..............................................................................................................................................................................................................17100.101000000000001
.......................................................................................................................................................................................................TA-ATTACAAGGCGTAAGC.........................18200.102000000000002
.........................CTTCGGGTGATTGTT...........................................................................................................................................................................................................15100.101000000000001
.....................................................................................................................................................................................................TATA-ATTACAAGGCGTA............................17200.102000000010001
.........................CTTCGGGTGATTGTTTT.........................................................................................................................................................................................................17100.101000000000001
................................................................................................................................................................................................................AGGCGTAAGCCTCGGAGT-ATGATT..........24200.051000000001000
...................................................................................................................................................................................................................CGTAAGCCTCGGAGT-ATGA............19200.051000000000001
......................................................................................................................................................................................................ATA-ATTACAAGGCGTAAGCCTCGG....................24200.051000000100000
............................................................................................................................................................................................................TACAAGGCGTAAGCCTCGGAGT-ATGA............26200.051000000010000
................................................................................................................................................................................................................AGGCGTAAGCCTCGGAGT-ATG.............21200.051000000000001
................................................................................................................................................................................................................AGGCGTAAGCCTCGGAG..................17200.051000000000001
................................................................................................................................................................................................................AGGCGTAAGCCTCGGAGT-ATGAT...........23200.051000000000001
............................................................................................................................................................................................................TACAAGGCGTAAGCCTCGGAGT-ATGAT...........27200.051000000000001
......................................................................................................................................................................................................ATA-ATTACAAGGCGTAAGCCTCGGA...................25200.051000000000100
............................................................................................................................................................................................................TACAAGGCGTAAGCCTCGGAGT-ATG.............25200.051000000000001
.............................................................................................................................................................................................................ACAAGGCGTAAGCCTCGGAG..................20200.051000000000001
..............................................................................................................................................................................................................CAAGGCGTAAGCCTCGGAGT-ATGATT..........26200.051000000001000
.............................................................................................................................................................................................................ACAAGGCGTAAGCCTCGGAGT-ATGATT..........27200.051000000010000
................................................................................................................................................................................................................AGGCGTAAGCCTCGGA...................16200.051000000000001
..............................................................................................................................................................GCGAGGG-TCACAATAT....................................................................16200.051000000000001
............................................................................................................................................................................................................TACAAGGCGTAAGCCTCGG....................19200.051000000000001
...............................................................................................................................................................................................................AAGGCGTAAGCCTCGGAGT-................19200.051000000000001
...............................................................................................................................................................................................................AAGGCGTAAGCCTCGGAGT-A...............20200.051000000000001
.....................................................................................................................................................................................................................TAAGCCTCGGAGT-ATGATT..........19200.051000000000001
...........................................................................................................................................................................................................TTACAAGGCGTAAGCCTCGGAGT-................23200.051000000000001
............................................................................................................................................................................................................TACAAGGCGTAAGCCTCGGA...................20200.051000000000001
droSec2
TTTTTT--CACTTTTTATCTTTTCACTTCGGGTGATTGTTTTTTTTCTCGCGAATT---CCGTCTCGCGTGAGTCCGATTTCTTCGTTGGGCGACAATTATAAGTCGTTTGTTTAG----TTTGGTTA----TATTTATTTACCACTCTCCCGTTAGGGCGAGGG-TCACAATATT---TG-GG--------TATT-TATA-ATTACAAGGCGTAAGCCTCGGAGT-ATGATTTAAAACTAACSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
...TTT--CACTTTTTATCTTTTCACTTCGG....................................................................................................................................................................................................................26200.4080107
..................................................................................TTCGTTGGGCGACAATTATAAGTCGTT......................................................................................................................................27180.3360006
....................................TGTTTTTTTTCTCGCGAATT---CCGTC...................................................................................................................................................................................2560.3320101
...............................................................................TTCTTCGTTGGGCGACAATTATAAGT..........................................................................................................................................26190.3261023
.....T--CACTTTTTATCTTTTCACTTCGGG...................................................................................................................................................................................................................25200.2550005
...TTT--CACTTTTTATCTTTTCACTTCG.....................................................................................................................................................................................................................25200.2040202
....................................TGTTTTTTTTCTCGCGAATT---CCGTCT..................................................................................................................................................................................2660.1710001
...................................................................................TCGTTGGGCGACAATTATAAGTCGTT......................................................................................................................................26180.1730003
...................................TTGTTTTTTTTCTCGCGAATT---CCGTC...................................................................................................................................................................................2660.1710001
................................TGATTGTTTTTTTTCTCGCGAATT---C.......................................................................................................................................................................................2560.1710100
.............................................................................................................TGTTTAG----TTTGGTTA----TATTTATTTAC....................................................................................................26200.1020002
............................................................................................................TTGTTTAG----TTTGGTTA----TATTTATTTACC...................................................................................................28200.1020002
............................................................................................................TTGTTTAG----TTTGGTTA----TATTTAT........................................................................................................23200.1020002
................................................................TCGCGTGAGTCCGATTTCTTCGTT...........................................................................................................................................................24200.1020110
............................................................................................................................................TACCACTCTCCCGTTAGGGCGAGGG-.............................................................................25200.1020020
.......................................................T---CCGTCTCGCGTGAGTCCGATTTCTT...............................................................................................................................................................26200.1020011
......................................TTTTTTTTCTCGCGAATT---CCGTCTC.................................................................................................................................................................................25100.1010100
............................................................................................................TTGTTTAG----TTTGGTTA----TATTTATTTA.....................................................................................................26200.1020002
......................................................................................................................................TTTATTTACCACTCTCCCGTTAGGGCGA.................................................................................28200.1020002
...TTT--CACTTTTTATCTTTTCACTTCGGGT..................................................................................................................................................................................................................28200.1020002
.........................................TTTTTCTCGCGAATT---CCGTCTCGCGTGA...........................................................................................................................................................................28120.0810001
............................................TTCTCGCGAATT---CCGTCTCGCGTGA...........................................................................................................................................................................25130.0810001
.............................................TCTCGCGAATT---CCGTCTCGCGTGA...........................................................................................................................................................................24130.0810001
....................................................................................CGTTGGGCGACAATTATAAGTCGTT......................................................................................................................................25180.0610001
................................................................................TCTTCGTTGGGCGACAATTATAAGTCGTT......................................................................................................................................29180.0610001
................................................................................TCTTCGTTGGGCGACAATTATAAGT..........................................................................................................................................25190.0510001
..............................................................................TTTCTTCGTTGGGCGACAATTATAAGT..........................................................................................................................................27190.0510001
..............................................................................TTTCTTCGTTGGGCGACAATTAT..............................................................................................................................................23190.0510001
...............................................................................TTCTTCGTTGGGCGACAATTATA.............................................................................................................................................23190.0510001
.............TTTATCTTTTCACTTCGGGTGATTGT............................................................................................................................................................................................................26200.0510001
..............................................................................................................GTTTAG----TTTGGTTA----TATTTATTT......................................................................................................23200.0510001
....................................................................GTGAGTCCGATTTCTTCGTTGGGC.......................................................................................................................................................24200.0510100
............................................................................................................TTGTTTAG----TTTGGTTA----TATTTATTTAC....................................................................................................27200.0510010
........CACTTTTTATCTTTTCACTTCGGG...................................................................................................................................................................................................................24200.0510001
............................................................................................................................................TACCACTCTCCCGTTAGGGCGAGGG-T............................................................................26200.0510001
.................................................................CGCGTGAGTCCGATTTCTTCGTTG..........................................................................................................................................................24200.0510001
......................................................TT---CCGTCTCGCGTGAGTCCGATTTC.................................................................................................................................................................25200.0510001
...............................................................CTCGCGTGAGTCCGATTTCTTCGTT...........................................................................................................................................................25200.0510001
...................................................................................................................................................................................TG-GG--------TATT-TATA-ATTACAAGGCGTAAGC.........................28200.0511000
...........................................................................CGATTTCTTCGTTGGGCGACAAT.................................................................................................................................................23200.0510001
.......................................................T---CCGTCTCGCGTGAGTCCGATTTCTTC..............................................................................................................................................................27200.0510001
.........................................................................................................................TTGGTTA----TATTTATTTACCACTCTC.............................................................................................25200.0510001
....TT--CACTTTTTATCTTTTCACTTCGGG...................................................................................................................................................................................................................26200.0510001
..............................................................TCTCGCGTGAGTCCGATTTCTTCGTT...........................................................................................................................................................26200.0510001
.....................................................................TGAGTCCGATTTCTTCGTTGGG........................................................................................................................................................22200.0510001
.................................................................CGCGTGAGTCCGATTTCTTCGTTGGGC.......................................................................................................................................................27200.0510001
...TTT--CACTTTTTATCTTTTCACTT.......................................................................................................................................................................................................................23200.0510001
......................................................TT---CCGTCTCGCGTGAGTCCGATTT..................................................................................................................................................................24200.0510001
.................................................................CGCGTGAGTCCGATTTCTTCGTTGG.........................................................................................................................................................25200.0510100
..............................................................TCTCGCGTGAGTCCGATTTCTTC..............................................................................................................................................................23200.0510001
........CACTTTTTATCTTTTCACTTCGGGTGA................................................................................................................................................................................................................27200.0510001
..............................................................TCTCGCGTGAGTCCGATTTCTTCGT............................................................................................................................................................25200.0510001
..................................................................................................................................................TCTCCCGTTAGGGCGAGGG-TCACAA.......................................................................25200.0510001
.TTTTT--CACTTTTTATCTTTTCACTTCGGG...................................................................................................................................................................................................................29200.0510001
................................................................TCGCGTGAGTCCGATTTCTTCGTTGGG........................................................................................................................................................27200.0510010
...............................................................................................................TTTAG----TTTGGTTA----TATTTATTTA.....................................................................................................23200.0510001
droYak3
GTTTTT--TATATCCCC-----------------------------------AATTAGACCTTCTCG-GCGGGTTCG--TGC--CGTTGGGCGACAATTATAAGTCGTT---TTAA----GTTGAT-T----TATTTAT-TACCACTCTCCCGTTAGGGCGAGGG-TCTTAATATT---------TTATGTAGGTT-TATA-A-TACGAGGCGTAAGCCACGGAGT-ATGATTTATAACTGA-SizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
............TCCCC-----------------------------------AATTAGACCTTCTCG-GCGGGT.........................................................................................................................................................................2640.5020000020
.....T--TATATCCCC-----------------------------------AATTAGACCTTCTCG-...............................................................................................................................................................................2540.5020000020
..............CCC-----------------------------------AATTAGACCTTCTCG-GCGGG..........................................................................................................................................................................2340.2510000010
..TTTT--TATATCCCC-----------------------------------AATTAGACCTTCTCG-G..............................................................................................................................................................................2940.2510000010
............TCCCC-----------------------------------AATTAGACCTTCTCG-GCGGG..........................................................................................................................................................................2540.2510000010
.................................................................................................................TAA----GTTGAT-T----TATTTAT-TACCACTCT..............................................................................................2670.1410000010
droEug1
TTTTTT--CTTACTTTCA-------C-----------------------------------------------------------------------------------------------------T----TTTTTATTTCCCCTAAACCTGTTAAGGTAAAGG-ATGGTATAAA---TG-GATTTATGATAATT-ATTT-ATTACACAGCTATGGCTGCGGAGT-ACGATTTTAGACTAACSizeHit CountTotal NormTotal
No Reads
droBia1
T------------------------------------------------------------------------------------------------------------------------------------ATTTATTT-TCCAAAACCTCTTAAGGCAAGGA-TAA-GATACATTGTTGGGTTA-CAATGGTAGTAAG-ATTACGCAGCTAAGGCTACGGAGT-ATAATTTTAGACTAACSizeHit CountTotal NormTotal
No Reads
droEle1
TTTTTAGTGAGATTCTTTATTTTCACGT----------------------------------------------------------TAGGGCGCCAAGTACTTTTTGTTCGTTTTGTATTTTTGTCTATTTTTATTTACTACTCCCTAGCCTGTTTAAGCAAAGG-GTTAGATAAAT-------ATA-CAAAGGGT-TATC-TTAACACAGCTATGGCTGCGGATTACCAAACCTAGACTAACSizeHit CountTotal NormTotal
No Reads
droRho1
T------------------------------------------------------------------------------------------------------------------------------------ATTTATTTCTCCTAAACCTGTTAAGGTAGAGGATAAACAAGTC---TT-GA----------TT-TACA-A-AACACAGCTAAGCATGCGGAGT-ACAATTTTAGACTAACSizeHit CountTotal NormTotal
No Reads
droFic1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGAGT-GTAATT-AAGACTAATSizeHit CountTotal NormTotal
No Reads
droKik1
TC----------------------------------------------------------------------------------------------------------------------------------CGTTTATTAGTCTTAGACCCGTTAGGGCAAGAT-ATAAAATCAGT-------ATTACAGAGATT-ATTAATTTACACAGCTAAGGCTGTGGAGTTACGATTAAAAACTAACSizeHit CountTotal NormTotal
No Reads

Generated: 12/06/2013 at 02:33 PM