ID:

dsi_144

 Coordinate:

chr3R_Mrandom_124:285-343 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.3 -30.3 -30.1

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AGCAATATGTTTATTTTGAGGAATAGCGTAATGGAAATTGATAGATCCGCTTGATCATGCCCACAAACAATCAATATATGCGTTGGCTGTTTGTGGACATGGACGAGAGGAGGCGTTACAAGTACAACATACGACACACACCGTGCATCAAACAACCGA
***********************************...((((...(((.((((.(((((.(((((((((.(((((......))))).))))))))).))))).)))).)))...)))).....************************************ 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M025
embryo
 SRR553486
Ovary		 M024
male body
 SRR553485
Ovary		 SRR553487
Ovary		 O001
Testis
 O002
Head
 SRR618934
Ovary		 M053
Female-body		 SRR553488
Ovary
......................................................................................CTGTTTGTGGACATGGACGAGA................................................... 22 0 1 38.00 38 13 11 4 6 0 2 0 0 0 1 1
......................................................................................CTGTTTGTGGACATGGACGAGG................................................... 22 1 1 7.00 7 2 3 0 2 0 0 0 0 0 0 0
......................................................................................CTGTTTGTGGACATGGACGAG.................................................... 21 0 1 5.00 5 0 0 4 0 0 0 0 0 1 0 0
..................................................TTGATCATGCCCACAAACAATC....................................................................................... 22 0 1 3.00 3 0 0 0 0 0 0 0 3 0 0 0
.......................TAGCGTAATGGAAATTGATAGATC................................................................................................................ 24 0 1 3.00 3 0 0 1 0 2 0 0 0 0 0 0
.....................................................................................GCTGTTTGTGGACATGGACGA..................................................... 21 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0
...............................TGGAAATTGATAGATCCGCTCGATCGT..................................................................................................... 27 2 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0
......................................................................................CTGTTTGTGGACATGGACGAGAT.................................................. 23 1 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0
..................................................................................TTGGCTGTTTGTGGACATGGAC....................................................... 22 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0
.....................................................................ATCAATATATGCGTTGGC........................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
......................................................................................CTGTTTGTGGACATGGACGAGAAA................................................. 24 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
........................................................................................GTTTGTGGACATGGACGAGAG.................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................TACGACACACACCGTGCATCA......... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.................................................................AACAATCAATATATGCGTTGGCTGT..................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................GCTGTTTGTGGACATGGACGAG.................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
......................................................................................CTGTTTGTTGACATGGACGAGAT.................................................. 23 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................TGTTTGTGGACATGGACGAGAGGAGG.............................................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.............................AATGGAAATTGATAGATCCGCTCGATCGT..................................................................................................... 29 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................TTGTCGACATGCAAGAGAGGAGG.............................................. 23 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1
..................................................................................TTGGCTGTTTGTGGACATGGA........................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.......................TAGCGTAATGGAAATTGATAGATCCGCT............................................................................................................ 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..............................ATGGAAATTGATAGATC................................................................................................................ 17 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..................................................................................TTGGCTGTTTGTGGACATGGATGAGGG.................................................. 27 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.................................................................................GTTGGCTGTTTGTGGACATG.......................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.................................GAAATTGATAGATCCGCTTGACA....................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................TGAGGAATAGCGTAATGGAAATTGAT..................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................GTACAACATACGACACACACCGTGCA............ 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
......................................................................................CTGTTTGTGGACATGGACGAGAA.................................................. 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................................TGATAGATCCGCTCGATCGTGCCCACAAAC........................................................................................... 30 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................TTTGTGGACATGGACGAGAGT................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
........GTTTATGTTGAGGAATA...................................................................................................................................... 17 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0
.................................GAAATTGATAGATCCGTTTGACA....................................................................................................... 23 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTGTGGACAGGGACG...................................................... 15 1 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................ACACACCGCGCGTCAAACC..... 19 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1
....................................................................................................GGACGATAGGAGGCGT........................................... 16 1 12 0.17 2 0 0 0 0 0 0 0 0 2 0 0
........................................GCAGATCCGCTTGATCA...................................................................................................... 17 2 20 0.10 2 0 0 0 0 0 0 0 0 2 0 0
.GCAATATCTTTATTTGGAGTA......................................................................................................................................... 21 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

TCGGTTGTTTGATGCACGGTGTGTGTCGTATGTTGTACTTGTAACGCCTCCTCTCGTCCATGTCCACAAACAGCCAACGCATATATTGATTGTTTGTGGGCATGATCAAGCGGATCTATCAATTTCCATTACGCTATTCCTCAAAATAAACATATTGCT
************************************.....((((...(((.((((.(((((.(((((((((.(((((......))))).))))))))).))))).)))).)))...))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body
 O002
Head
 O001
Testis
 SRR553485
Ovary		 SRR618934
Ovary
............................TATGTTGTACTTGTAACGCCT.............................................................................................................. 21 0 1 35.00 35 32 3 0 0 0 0
...........................GTATGTTGTACTTGTAACGCC............................................................................................................... 21 0 1 9.00 9 9 0 0 0 0 0
............................TATGTTGTACTTGTAACGCCC.............................................................................................................. 21 1 1 6.00 6 6 0 0 0 0 0
............................TATGTTGTACTTGTAACGCCG.............................................................................................................. 21 1 1 2.00 2 1 1 0 0 0 0
...........................GTATGTTGTACTTGTAACGCCT.............................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0
..........................................AACGCCTCCTCTCGTCCATG................................................................................................. 20 0 1 1.00 1 0 0 0 1 0 0
.........................................................................................TTGTTTGTGGGCATGATCGAG................................................. 21 1 1 1.00 1 0 0 0 0 0 0
.....................................................TCGTCCATGTCCACAAACAGCC.................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0
..............................................................................................TGTGGGCATGATCAAGCGGAT............................................ 21 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................ATCAAGCGGATCTATCAAT.................................... 19 0 1 1.00 1 0 0 1 0 0 0
....................GTGTGTCGTATGTTGTACT........................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................ATTTCCATTACGCTATTCC................... 19 0 1 1.00 1 0 0 1 0 0 0
.................................................................................................GGGCATGATCAAGCGG.............................................. 16 0 1 1.00 1 0 0 0 0 1 0
.....TGTTTGATGCACGGTGTGTGG..................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
............................TATGTTGTACTTGTA.................................................................................................................... 15 0 3 0.33 1 0 0 0 0 0 1
........................GTCGTATGGTGCATTTGTA.................................................................................................................... 19 3 16 0.06 1 0 0 0 0 0 0
..............................................................................................TGTGGCCATGATTAAGAGG.............................................. 19 3 20 0.05 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 chr3R_Mrandom_124:235-393 - dsi_144 AGCAA-----TATGTTTAT--TTTGAGGAATAGCGTAATG-GAAATT-G--ATAGATCCGCTTGATCATGCCCACAAACAATCAAT--ATATG--------CGTTGGCTGTTTGTGGACATGGACGAGAGGAGGCG--TTAC----A-------AGTA------CAACATACGA--CACACACCGTGC----------ATCAAACAACCGA
droSec2 scaffold_0:12486090-12486248 + dse_135 AGCAA-----TATGTTTAT--TTTGAGGAATAGCGTAATG-GAAATT-G--ATAGATCCGCTCGATCATGCCCACAAACAATCAGT--CTATG--------CGTTGGCTGTTTGTGGACATGGACGAGAGGAGGCG--TTAC----A-------AGTA------CAACATACGA--CACACACCGTGC----------ATCAACCAACCGA
dm3 chr3R:9521062-9521220 - AGCAA-----TATGTTTAT--TTTGAGGAATAGCGTAATG-GAAATT-G--ATAGATCCGCTCGACCATGCCCACAAACAATCAAT--CTATG--------GATTGGCTGTTTGTGGACATGGATGAGGGGTGGCG--TTAC----A-------AGTA------CAACATACGA--CACACACCGTGC----------ATCAACCAACCAA
droEre2 scaffold_4770:12114097-12114258 + AGCAA-----TATTTTTAT--TTTGATGAATAGCGTAATG-GAAATT-A--ATAGATCCCCTCGACCATGCCCACAAACAATCAAT--CCATA--------GGTTGGCTGTTTGTGGACATAGACGAGAGGAGGCG--GTAC----GAGTACCAAGTA------CAACATAAAA------CACTGTGC----------ATCCACCAACCGA
droYak3 3R:13829456-13829614 - AGCAA-----TATGTTTAT--TTTGAGGAATAGAGTAATG-GAAATT-A--ATAGATTCCCTCGACCATGCCCACAAGCAATCAAC--CTATG--------GGTTGGATGTTTGTAGACATGGACGAGAGGAGCCG--GTAC----A-------AGTA------CAACATACGA--CACACCCTGTGC----------ATCCACCAACCGA
droEug1 scf7180000409802:453288-453444 + AGCAA-----TATGTTTAT--TTTGACAAAAAGCTTAATG-GAAATT-A--ATAGATACACTCGACCATGCCCACACACAACCCAC--TA-TC-GTTTCTGGGTTGGTTGTGTGTGGACAAGGACGAGTAGTGACC--AGAC----A-------AGTA------CAACATAAGG--T--------CAC----------ATCCACCAACTGA
droBia1 scf7180000302402:2257639-2257797 - AGCAA-----TATGTTTAT--TTTGAGGAAAAGCTTAATG-GAAATT-AGTATAGATTCCCCTGACCATGTCCGCACACAATCCAC--CTACT--AGTCTGC----GTTGTATGTGGACATGGACAGGAGGAGACG--AGAC----A-------AGTA------CAA----GTA--CACACCCTGTGC----------ATCCACCAAACGA
droTak1 scf7180000415380:348700-348870 - AGCAA-----TATGTTTAT--TTTGACGAAAAGCTTAATG-GAAATT-A--TTAGATCCCCTCGACCATGCCCACACACAATCCCCCGTT-TC-GAATCTGGGTTGGATGTGTGTGGACATGGACGAGTGGAGATG--AGAGAC--A-------AGTA------CAACATAAGACACACACCCTGTGC----------AACCACCAACTGA
droEle1 scf7180000491047:1670847-1671018 + AGCAT-----TATATTTAT--TTTTACGAAAAGCGTAACCCAAAATT-G--ATAGTTCCGCCCGACCATGCCCACACACATTCCTCAGCT-TC-GTGGCTGGGTTGGCTGTGTGTGGACATGAGCGAGCGGAGATG--GGACACATA-------AGTA------CAACATAAGA--CACACCCTGTGC----------ATCCACCAACTGA
droRho1 scf7180000769095:41483-41655 + AGCAA-----GTTGTTTAT--TTTGACGAAAAGCGTAATA-GAAATT-A--ATAGTTCCACTCGACTATGCCCACACACATCCCCCACCA-TA-AAATCTGGGTCGGATGTGTGTGGACATGGGCGAGTGGATACACGGGACACATA-------AGTA------CAACATAAGA--CACACCCTGTGC----------ATCTATCAACTGA
droFic1 scf7180000453912:20388-20549 - AGCAA-----TATGTTTAT--TTTTACGAAAAGCGTAACC-GAAATT-G--ATCATTTTACCCGGCCATGTCCATGCACAACCCAC--TCCTC-GAATC----TGGAATGTGTGCGGACATGGGCGAGTGAAAACG--GAGC----A-------AGTA------AAACATAACA--CACACCTTGTGC----------ATCCACCAACTGA
droKik1 scf7180000302706:531091-531275 - AGCAGCAATATTTGTTTAT--TTTGTCGGAAAGCCTTACC-GAAATCTATTGTAGTTTCGCTCGACCATGCCCACACTTGGCCCAC--CTCTGAA-TAAGGCTTCGGCTAGGTGTGGACATGGGCGAGTGAAAACA--ACGC----GCA-----TGTTATATTTGAACGTAAGA--CACACCCTGTAC-------CTTATCCAGCAACTGA
droAna3 scaffold_13340:10521960-10522120 + AGCAA-----TCTGTTTAA--TTTGACGAAAGTTTATACC-GAAATT-T--GCAGTTCTGTTCGATCCCGTCCACACACAGCCAAT--CTTTGGGTTCAAGGTTTGAGTCTGTGTGGGCGCAATCGCTTGGATACT--TTAG-----------------------ATACTAAGA--GACACTCCGTGT----------GACCATCAACTGA
droBip1 scf7180000396708:5537324-5537484 + AGCAA-----TCTGTTTAA--TTTAAAGAACCTCTATACC-GAAATT-T--GTAGCTCCGCTTGATTACGTCCACACACAGCCAAT--CTTTGGGTTCAAGGTTTGAATCTGTGTGGACGTGATCGGTCGGATACT--TTGG----A---------TA------CA----AAGA--GACACTTCGTGT----------TACCACCAACTGA
dp5 2:10072318-10072498 - GGTAT-----AATGTTTTTTTTTTTGGGACAAACATAACC-GATACT----TTACCAATGCTCCACCACGCCCACACACATCCATA--CT-TA-ACCTATAGTCTGCCTGTGTGTGGACGATGCGGAGATCGCGCA--AGGA----AGGTACC-T-TA------TAACATAGAA--AGCATCCCGCATTTACCATCTACTCTACCAACTGA
droPer2 scaffold_0:10409010-10409190 + GGTAT-----AGCGTTTTTTTTTTTTGGACAAACATAACC-GATACT----TTACCAATACTCCACCACGCCCACACACATCCATA--CT-TA-ACTATAAGTCTGCCTGTGTGTGGACGAGGCGGAGATCGCGCA--AGGA----AGGTACC-T-TA------TAACATAGAA--AGCATCCCGCATTTACCATCTACTCTACCAACTGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
AGCAA-----TATGTTTAT--TTTGAGGAATAGCGTAATG-GAAATT-G--ATAGATCCGCTTGATCATGCCCACAAACAATCAAT--ATATG--------CGTTGGCTGTTTGTGGACATGGACGAGAGGAGGCG--TTAC----A-------AGTA------CAACATACGA--CACACACCGTGC----------ATCAAACAACCGASizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
...........................................................................................................CTGTTTGTGGACATGGACGAGA..................................................................................22138.003801361100104210
...........................................................................................................CTGTTTGTGGACATGGACGAG...................................................................................2115.005000000004001
.............................................................TTGATCATGCCCACAAACAATC................................................................................................................................2213.003000003000000
..............................TAGCGTAATG-GAAATT-G--ATAGATC.........................................................................................................................................................2413.003000000021000
..........................................................................................................GCTGTTTGTGGACATGGACGA....................................................................................2112.002000000000200
.......................................................................................................TTGGCTGTTTGTGGACATGGAC......................................................................................2212.002001000001000
................................................................................ATCAAT--ATATG--------CGTTGGC.......................................................................................................1811.001000010000000
.............................................................................................................GTTTGTGGACATGGACGAGAG.................................................................................2111.001001000000000
.........................................................................................................................................................................TACGA--CACACACCGTGC----------ATCA.........2111.001000010000000
............................................................................AACAATCAAT--ATATG--------CGTTGGCTGT....................................................................................................2511.001000000000001
..........................................................................................................GCTGTTTGTGGACATGGACGAG...................................................................................2211.001000000010000
............................................................................................................TGTTTGTGGACATGGACGAGAGGAGG.............................................................................2611.001000000010000
.......................................................................................................TTGGCTGTTTGTGGACATGGA.......................................................................................2111.001000000000100
..............................TAGCGTAATG-GAAATT-G--ATAGATCCGCT.....................................................................................................................................................2811.001000000010000
.....................................ATG-GAAATT-G--ATAGATC.........................................................................................................................................................1711.001000000010000
......................................................................................................GTTGGCTGTTTGTGGACATG.........................................................................................2011.001000010000000
.......................TGAGGAATAGCGTAATG-GAAATT-G--AT..............................................................................................................................................................2611.001000000000001
...........................................................................................................................................................GTA------CAACATACGA--CACACACCGTGC----------A............2611.001000000010000
droSec2
AGCAA-----TATGTTTAT--TTTGAGGAATAGCGTAATG-GAAATT-G--ATAGATCCGCTCGATCATGCCCACAAACAATCAGT--CTATG--------CGTTGGCTGTTTGTGGACATGGACGAGAGGAGGCG--TTAC----A-------AGTA------CAACATACGA--CACACACCGTGC----------ATCAACCAACCGASizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
...........................................................................................................CTGTTTGTGGACATGGACGAGA..................................................................................22126.00268972
...........................................................................................................CTGTTTGTGGACATGGACGAG...................................................................................2118.0082132
.............................................................TCGATCATGCCCACAAACAATC................................................................................................................................2214.0041003
...........................................................................................................CTGTTTGTGGACATGGACG.....................................................................................1913.0033000
...........................................................................................................CTGTTTGTGGACATGGACGA....................................................................................2013.0030102
.......................................................................................................TTGGCTGTTTGTGGACATGGAC......................................................................................2211.0011000
.....................TTTGAGGAATAGCGTAATG-GAAATT-G--................................................................................................................................................................2611.0010100
...................................................................................................................................................................................ACACCGTGC----------ATCAACCAACCG.2111.0010010
.............................................................TCGATCATGCCCACAAACAATCAG..............................................................................................................................2411.0010010
.................AT--TTTGAGGAATAGCGTAATG-..........................................................................................................................................................................2111.0010001
................................................................ATCATGCCCACAAACAATCAGT--C..........................................................................................................................2311.0010001
.................................................................TCATGCCCACAAACAATCAGT--C..........................................................................................................................2211.0010010
..........................................................................................................GCTGTTTGTGGACATGGACGAG...................................................................................2211.0010010
..........................................................................................ATG--------CGTTGGCTGTTTGTGGACATGGAC......................................................................................2711.0011000
droEre2
AGCAA-----TATTTTTAT--TTTGATGAATAGCGTAATG-GAAATT-A--ATAGATCCCCTCGACCATGCCCACAAACAATCAAT--CCATA--------GGTTGGCTGTTTGTGGACATAGACGAGAGGAGGCG--GTAC----GAGTACCAAGTA------CAACATAAAA------CACTGTGC----------ATCCACCAACCGASizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
....................................................................TGCCCACAAACAATCAAT--CCATA--------GGT...........................................................................................................2612.002000020
....................................................................................AT--CCATA--------GGTTGGCTGTTTGT................................................................................................2111.001000010
............................................................................................................TGTTTGTGGACATAGACGAGAGGAG..............................................................................2511.001000010
..................................................................................CAAT--CCATA--------GGTTGGCTGTTTGTGGAC............................................................................................2711.001000010
......................................................................................................................CATAGACGAGAGGAGGCG--GT.......................................................................2011.001000010
..............................................................................................................TTTGTGGACATAGACGAGAGG................................................................................2111.001000010
.............................................................................................................GTTTGTGGACATAGACGAGA..................................................................................2011.001001000
..................T--TTTGATGAATAGCGTAATG-GA........................................................................................................................................................................2211.001100000
.................................................................................................................GTGGACATAGACGAGAGGAGGC............................................................................2211.001001000
......................................................................................................GTTGGCTGTTTGTGGACATAGA.......................................................................................2211.001001000
......................................................................................................................CATAGACGAGAGGAGGCG--GTA......................................................................2111.001000100
...................................................................................AAT--CCATA--------GGTTGGCTGTTTGTGGA.............................................................................................2511.001001000
......................................................................................................................................................................ACATAAAA------CACTGTGC----------ATCCA........2111.001000100
..................................................................................................................................GAGGCG--GTAC----GAGTACCAAGTA------CAAC...........................................2611.001000010
.........................................................................................................GGCTGTTTGTGGACATAGAC......................................................................................2011.001000010
.............TTTTAT--TTTGATGAATAGCG................................................................................................................................................................................2011.001000100
droYak3
AGCAA-----TATGTTTAT--TTTGAGGAATAGAGTAATG-GAAATT-A--ATAGATTCCCTCGACCATGCCCACAAGCAATCAAC--CTATG--------GGTTGGATGTTTGTAGACATGGACGAGAGGAGCCG--GTAC----A-------AGTA------CAACATACGA--CACACCCTGTGC----------ATCCACCAACCGASizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
.................AT--TTTGAGGAATAGAGTAATG-GA........................................................................................................................................................................2312.0020010010
.....................................................................................................................................................................AACATACGA--CACACCCTGTGC----------.............2111.0010000010
........................................................................................CTATG--------GGTTGGATGTTTGTAGACAT..........................................................................................2511.0010010000
.....................................................................................................GGTTGGATGTTTGTAGACATG.........................................................................................2111.0010000001
................................GAGTAATG-GAAATT-A--ATAGAT..........................................................................................................................................................2111.0010010000
............................................................................................................................CGAGAGGAGCCG--GTAC----A-------AGTA------CAAC...........................................2511.0010010000
droEug1
AGCAA-----TATGTTTAT--TTTGACAAAAAGCTTAATG-GAAATT-A--ATAGATACACTCGACCATGCCCACACACAACCCAC--TA-TC-GTTTCTGGGTTGGTTGTGTGTGGACAAGGACGAGTAGTGACC--AGAC----A-------AGTA------CAACATAAGG--T--------CAC----------ATCCACCAACTGASizeHit CountTotal NormTotal
No Reads
droBia1
AGCAA-----TATGTTTAT--TTTGAGGAAAAGCTTAATG-GAAATT-AGTATAGATTCCCCTGACCATGTCCGCACACAATCCAC--CTACT--AGTCTGC----GTTGTATGTGGACATGGACAGGAGGAGACG--AGAC----A-------AGTA------CAA----GTA--CACACCCTGTGC----------ATCCACCAAACGASizeHit CountTotal NormTotal
No Reads
droTak1
AGCAA-----TATGTTTAT--TTTGACGAAAAGCTTAATG-GAAATT-A--TTAGATCCCCTCGACCATGCCCACACACAATCCCCCGTT-TC-GAATCTGGGTTGGATGTGTGTGGACATGGACGAGTGGAGATG--AGAGAC--A-------AGTA------CAACATAAGACACACACCCTGTGC----------AACCACCAACTGASizeHit CountTotal NormTotal
No Reads
droEle1
AGCAT-----TATATTTAT--TTTTACGAAAAGCGTAACCCAAAATT-G--ATAGTTCCGCCCGACCATGCCCACACACATTCCTCAGCT-TC-GTGGCTGGGTTGGCTGTGTGTGGACATGAGCGAGCGGAGATG--GGACACATA-------AGTA------CAACATAAGA--CACACCCTGTGC----------ATCCACCAACTGASizeHit CountTotal NormTotal
No Reads
droRho1
AGCAA-----GTTGTTTAT--TTTGACGAAAAGCGTAATA-GAAATT-A--ATAGTTCCACTCGACTATGCCCACACACATCCCCCACCA-TA-AAATCTGGGTCGGATGTGTGTGGACATGGGCGAGTGGATACACGGGACACATA-------AGTA------CAACATAAGA--CACACCCTGTGC----------ATCTATCAACTGASizeHit CountTotal NormTotal
No Reads
droFic1
AGCAA-----TATGTTTAT--TTTTACGAAAAGCGTAACC-GAAATT-G--ATCATTTTACCCGGCCATGTCCATGCACAACCCAC--TCCTC-GAATC----TGGAATGTGTGCGGACATGGGCGAGTGAAAACG--GAGC----A-------AGTA------AAACATAACA--CACACCTTGTGC----------ATCCACCAACTGASizeHit CountTotal NormTotal
No Reads
droKik1
AGCAGCAATATTTGTTTAT--TTTGTCGGAAAGCCTTACC-GAAATCTATTGTAGTTTCGCTCGACCATGCCCACACTTGGCCCAC--CTCTGAA-TAAGGCTTCGGCTAGGTGTGGACATGGGCGAGTGAAAACA--ACGC----GCA-----TGTTATATTTGAACGTAAGA--CACACCCTGTAC-------CTTATCCAGCAACTGASizeHit CountTotal NormTotal
No Reads
droAna3
AGCAA-----TCTGTTTAA--TTTGACGAAAGTTTATACC-GAAATT-T--GCAGTTCTGTTCGATCCCGTCCACACACAGCCAAT--CTTTGGGTTCAAGGTTTGAGTCTGTGTGGGCGCAATCGCTTGGATACT--TTAG-----------------------ATACTAAGA--GACACTCCGTGT----------GACCATCAACTGASizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
........................................................................................................TGAGTCTGTGTGGGCGCAATCGCTTGG................................................................................2712.002000020
............................................................................................................................................AG-----------------------ATACTAAGA--GACACTCCGT.........................2112.002020000
...................................ATACC-GAAATT-T--GCAGTTCTG.......................................................................................................................................................2111.001010000
droBip1
AGCAA-----TCTGTTTAA--TTTAAAGAACCTCTATACC-GAAATT-T--GTAGCTCCGCTTGATTACGTCCACACACAGCCAAT--CTTTGGGTTCAAGGTTTGAATCTGTGTGGACGTGATCGGTCGGATACT--TTGG----A---------TA------CA----AAGA--GACACTTCGTGT----------TACCACCAACTGASizeHit CountTotal NormTotal
No Reads
dp5
GGTAT-----AATGTTTTTTTTTTTGGGACAAACATAACC-GATACT----TTACCAATGCTCCACCACGCCCACACACATCCATA--CT-TA-ACCTATAGTCTGCCTGTGTGTGGACGATGCGGAGATCGCGCA--AGGA----AGGTACC-T-TA------TAACATAGAA--AGCATCCCGCATTTACCATCTACTCTACCAACTGASizeHit CountTotal NormTotalV112
Male-body		V043
Embryo		V051
Head		M022
Male-body		M040
Female-body		M059
Embryo		M062
Head
...........................................................................................TA-ACCTATAGTCTGCCTGTGTGTGGA.............................................................................................2611.0010000100
...................................................................................ATA--CT-TA-ACCTATAGTCTGCCTGTGT..................................................................................................2611.0010000010
.................................................................................CCATA--CT-TA-ACCTATAGTCTGCCTG.....................................................................................................2511.0010000100
...........................................................................................TA-ACCTATAGTCTGCCTGTGT..................................................................................................2111.0010000100
..............................................................................................................................AGATCGCGCA--AGGA----AGGTACC-T-.......................................................2211.0010000100
droPer2
GGTAT-----AGCGTTTTTTTTTTTTGGACAAACATAACC-GATACT----TTACCAATACTCCACCACGCCCACACACATCCATA--CT-TA-ACTATAAGTCTGCCTGTGTGTGGACGAGGCGGAGATCGCGCA--AGGA----AGGTACC-T-TA------TAACATAGAA--AGCATCCCGCATTTACCATCTACTCTACCAACTGASizeHit CountTotal NormTotalV111
Male-body		V042
Embryo		V050
Head		V057
Head		M021
Embryo		M042
Female-body
...........................................................................................TA-ACTATAAGTCTGCCTGT....................................................................................................1912.002000020
..............................................................................................................TGTGTGGACGAGGCGGAGAT.................................................................................2011.001100000
..................................................................................................TAAGTCTGCCTGTGTGTGGACGAGGC.......................................................................................2611.001100000
...............................................................................................................GTGTGGACGAGGCGGAGATC................................................................................2011.001100000
.............................................................................................................GTGTGTGGACGAGGCGGAG...................................................................................1911.001100000
..........AGCGTTTTTTTTTTTTGGAC.....................................................................................................................................................................................2011.001000010
............................................................................................................................GGAGATCGCGCA--AGGA----AG...............................................................1811.001000010

Generated: 12/06/2013 at 02:32 PM