ID:

dsi_137

 Coordinate:

2R:2140247-2140323 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.1 -19.0 -18.6

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CGTCACCGGCTTTTTTGCTTTTTAGCTGGCGCATCGAGTGGCAGCGGCTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGTCGTCGGAAAAACGCTGAGAAGCGAGTGCAGCTAAAGAAAAATCTAGCCAATTCACAAGTAAAAGTGTTAGCCAGTTTGCAATACACAACACTGTTGA
***********************************.....(((((..(((((.((((.(((.((.....(((.....)))..)).))).)))))))))..))...)))..******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M024
male body
 M023
head
 M025
embryo
 M053
Female-body		 SRR618934
Ovary		 O002
Head
 GSM343915
embryo
 O001
Testis
 SRR553487
Ovary
..................................................AGATGTTCTTTGGAAGTG............................................................................................................. 18 0 1 46.00 46 9 31 0 4 2 0 0 0 0
.....................................................................GCTGGTCAAGTCGTCGGAAAAACGCT.................................................................................. 26 0 1 14.00 14 14 0 0 0 0 0 0 0 0
........................................................................GGTCAAGTCGTCGGAAAAACGCT.................................................................................. 23 0 1 12.00 12 9 0 3 0 0 0 0 0 0
.........................................................................GTCAAGTCGTCGGAAAAACGCT.................................................................................. 22 0 1 11.00 11 9 2 0 0 0 0 0 0 0
.................................................................................GTCGGAAAAACGCTGAGAAG............................................................................ 20 0 1 10.00 10 1 6 3 0 0 0 0 0 0
...........................................................................CAAGTCGTCGGAAAAACGCT.................................................................................. 20 0 1 8.00 8 7 0 1 0 0 0 0 0 0
.....................................................................GCTGGTCAAGTCGTCGGA.......................................................................................... 18 0 1 8.00 8 0 3 1 0 2 1 1 0 0
.........................................................................GTCAAGTCGTCGGAAAAAC..................................................................................... 19 0 1 4.00 4 0 3 1 0 0 0 0 0 0
.................................................................................GTCGGAAAAACGCTGAGAA............................................................................. 19 0 1 3.00 3 1 2 0 0 0 0 0 0 0
.........................................................................GTCAAGTCGTCGGAAAAACGCTGAGA.............................................................................. 26 0 1 3.00 3 2 0 1 0 0 0 0 0 0
..................................................AGATGTTCTTTGGAAGTGCGC.......................................................................................................... 21 0 1 3.00 3 0 0 0 0 0 1 1 1 0
.........................................................................GTCAAGTCGTCGGAAAAACG.................................................................................... 20 0 1 2.00 2 0 2 0 0 0 0 0 0 0
..................................................AGATGTTCTGTGGAAGTG............................................................................................................. 18 1 1 2.00 2 0 2 0 0 0 0 0 0 0
..................................................AGATGTTCTTTGGAAGTGCG........................................................................................................... 20 0 1 2.00 2 1 0 0 0 1 0 0 0 0
........................................................................GGTCAAGTCGTCGGAAAAACGCTGAGA.............................................................................. 27 0 1 2.00 2 1 0 1 0 0 0 0 0 0
......................................................................CTGGTCAAGTCGTCGGAA......................................................................................... 18 0 1 2.00 2 0 2 0 0 0 0 0 0 0
...................................................................................CGGAAAAACGCTGAGAAG............................................................................ 18 0 1 2.00 2 0 2 0 0 0 0 0 0 0
.............................................................................AGTCGTCGGAAAAACGCT.................................................................................. 18 0 1 2.00 2 0 0 0 0 2 0 0 0 0
................................................................AGTGCGCTGGTCAAGTCGTC............................................................................................. 20 0 1 2.00 2 0 0 2 0 0 0 0 0 0
...........................................................................................................................................................TTGCAATACACAACACTG.... 18 0 1 2.00 2 1 1 0 0 0 0 0 0 0
..................................................................................TCGGAAAAACGCTGAGAAG............................................................................ 19 0 1 2.00 2 0 2 0 0 0 0 0 0 0
.........................................................................GTCAAGTCGTCGGAAAAACGCTGAGG.............................................................................. 26 1 1 2.00 2 2 0 0 0 0 0 0 0 0
......................................................GTTCTTTGGAAGTGCGCTG........................................................................................................ 19 0 1 2.00 2 1 0 0 0 1 0 0 0 0
.....................................................................................................................AAAATCTAGCCAATTCACAAGTAAAAGT................................ 28 0 1 2.00 2 0 0 0 2 0 0 0 0 0
..............................................................................GTCGTCGGAAAAACGCTGAGAAGCG.......................................................................... 25 0 1 2.00 2 0 0 0 0 0 2 0 0 0
..........................................................TTTGGAAGTGCGCTGGTCA.................................................................................................... 19 0 1 2.00 2 0 0 2 0 0 0 0 0 0
......................................................................CTGGTCAAGTCGTCGGAAAAAC..................................................................................... 22 0 1 2.00 2 1 1 0 0 0 0 0 0 0
..........................................................................................................................CTAGCCAATTCACAAGTAAAAGT................................ 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..................................................................TGCGCTGGTCAAGTCGTC............................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................GTCAAGTCGTCGGAAAAA...................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................TAGCCAGTTTGCAATACAC........... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.........................................................................................AACGCTGAGAAGCGAGTGCAGCTAAAGA............................................................ 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.........................................................CTTTGGAAGTGCGCTGGTCAAGG................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................GAAGTGCGCTGGTCAAGTCGTC............................................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.........................................................................GTCAAGCCGTCGGAAAAACGCT.................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................AGATGTTCTTTGGAAGT.............................................................................................................. 17 0 1 1.00 1 0 0 0 0 1 0 0 0 0
......................................................................................................GAGTGCAGCTAAAGAAAAATCTAGCC................................................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.....................................................................GCTGGTCAAGTCGTCGGCAAAACGCT.................................................................................. 26 1 1 1.00 1 0 0 0 0 0 0 1 0 0
.....................................................................GCTGGTCAAGTCGTCGGAAAAA...................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................TTCTTTGGAAGTGCGCTGGTCAAG.................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................................................GGAAGTGCGCTGGTCAAGT................................................................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0
......................................................................CTGGTCAAGTCGTCGGAAAAACGCT.................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................AGTGTTAGCCAGTTTGCA................. 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0
.................................................................................GTCGGAAAAACGCTGAGA.............................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
................................................TCAGATGTTCTTTGGAAGTGCGCTG........................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.....................................................TGTTCTTTGGAAGTG............................................................................................................. 15 0 1 1.00 1 0 0 0 0 1 0 0 0 0
......................................................GTTCTTTGGAAGTGCGCTGG....................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0
........................................................................................AAACGCTGAGAAGCGAGTGCAGCTAA............................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0
.............................................................................AGTCGTCGGAAAAACGCTGAGAAGCGAGT....................................................................... 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0
................................................TCAGATGTTCTTTGGAAGTGCGCT......................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..................................................................TGCGCTGGTCAAGTCGTCGGA.......................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0
...............................................................AAGTGCGCTGGTCAAGTCGT.............................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0
...........................................................................................................CAGCTAAAGAAAAATCTAGC.................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0
..................................................AGATGTTCTTTGGAAGTGC............................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................CAAGCCGTCGGAAAAA...................................................................................... 16 1 1 1.00 1 0 0 0 0 0 0 0 0 0
......................................................................CTGGTCAAGTCGTCGGCAA........................................................................................ 19 1 1 1.00 1 0 0 0 0 0 0 1 0 0
..................................................................................TCGGAAAAACGCTGAGAAGC........................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................CGCTGGTCAAGTCGTCGGAAAAACGCT.................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................GTTAGCCAGTTTGCAATACACA.......... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.................................................................................................GAAGCGAGTGCAGCTAAAGA............................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1
..........................................................................TCAAGTCGTCGGAAAAACGCTGAGA.............................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................GTTCTTTGGAAGTGCGC.......................................................................................................... 17 0 1 1.00 1 0 0 0 0 1 0 0 0 0
............................................................................AAGTCGTCGGAAAAACGCTGAGAAGC........................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0
............................................................................AAGTCGTCGGAAAAACGCT.................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................AACGCTGAGAAGCGAGTGC..................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.................................................................................GTCGGAAAAACGCTGAGAAGGGAGT....................................................................... 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0
.........................................................................GTCAAGGCGTCGGAAAAAC..................................................................................... 19 1 1 1.00 1 0 0 1 0 0 0 0 0 0
...................................................................................CGGAAAAACGCTGAGAAGCGAGTGC..................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0
.........................................................CTTTGGAAGTGCGCTGGT...................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0
........................................................................GGTCAAGTCGTCGGAAAAACGCC.................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................AAGTGCGCTGGTCAAGTCGAC............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................GTCAAGTCGTCGGAAAAACGCTGA................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................AAATCTAGCCAATTCACAAGTAAAAGT................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0
......................................................................................AAAAACGCTGAGAAGCGAG........................................................................ 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................CGCTGAGAAGCGAGTGCAGCTAAAGA............................................................ 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.................................................CAGATGTTCTTTGGAAGTGCGCTGG....................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0
....................................................ATGTTCTTTGGAAGTGCGCT......................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.................................................................................................................................ATTCACAAGTAAAAGTGTTAGCC......................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..............................................................................GTCGTCGGAAAAACGCTG................................................................................. 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0
..........................................................................................................................CTAGCCAATTCACAAGTAAAAGTGT.............................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.........................................................................................AACGCTGAGAAGCGAGTG...................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.....................................................................GCTGGTCAAGTCGTCGGAAAAACGC................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................CTAGCCCACTCACAAGTAAAAGT................................ 23 2 1 1.00 1 0 0 0 1 0 0 0 0 0
...............................................................................................GAGAAGCGAGTGCAGCTAAAGAAAAATC...................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.....................................................................GCTGGTCAAGTCGTCGGAAAAAC..................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................TTCTTTGGAAGTGCCC.......................................................................................................... 16 1 4 0.25 1 0 0 0 0 1 0 0 0 0
.......................................................TGCTTTGGCAGTACGCTGG....................................................................................................... 19 3 20 0.15 3 0 0 0 0 0 0 0 0 0
.........................................................CTTTGGCAGTACGCTGG....................................................................................................... 17 2 20 0.10 2 0 0 0 0 0 0 0 0 0
............................................................ACGGAGTGCGCTGGTCAAG.................................................................................................. 19 3 11 0.09 1 0 0 0 1 0 0 0 0 0
..................TTCTTAGTTGGTGCATCGA............................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1
..............................................................GAAGTTCGGTGGTCAAGTA................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0
....ACCGGATTTTTTACTTT............................................................................................................................................................ 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TCAACAGTGTTGTGTATTGCAAACTGGCTAACACTTTTACTTGTGAATTGGCTAGATTTTTCTTTAGCTGCACTCGCTTCTCAGCGTTTTTCCGACGACTTGACCAGCGCACTTCCAAAGAACATCTGAGCCGCTGCCACTCGATGCGCCAGCTAAAAAGCAAAAAAGCCGGTGACG
*******************************************************************..(((...((..(((((((((.(((.((..(((.....))).....)).))).)))).)))))..))))).....*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
Ovary		 SRR553486
Ovary		 SRR553487
Ovary		 M023
head
 SRR618934
Ovary
........................TGGCTAACACTTTTACTTGTGAATGGGC............................................................................................................................. 28 1 1 5.00 5 0 5 0 0 0
................................................................................................................TTCCAAAGAACATCTGAGCCGCTGC........................................ 25 0 1 2.00 2 1 1 0 0 0
.....................................TACTTGTGAATGGGCTAGATTTTTCT.................................................................................................................. 26 1 1 2.00 2 1 1 0 0 0
........................................................................................................CAGCGCACTTCCAAAGAACATCTGAGC.............................................. 27 0 1 2.00 2 2 0 0 0 0
........................TGGCTAACACTTTTACTTGTGAATGGGG............................................................................................................................. 28 2 1 2.00 2 2 0 0 0 0
............................................................................................................................TCTGAGCCGCTGCCACTCGATGCGC............................ 25 0 1 2.00 2 1 1 0 0 0
.....................AACTGGCTAACACTTTTACTTGTGA................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0
....................................................................................................................AAAGAACATGTGAGC.............................................. 15 1 10 1.50 15 0 0 0 0 15
.............................................................................TTCTCAGCGCTTTTCCGACGACT............................................................................. 23 1 1 1.00 1 1 0 0 0 0
...............................................................................................................CTTCCAAAGAACATCTGAGCCGCTGCCAC..................................... 29 0 1 1.00 1 0 1 0 0 0
.........................................................................................................AGCGCACTTCCAAAGAACATCTGAGC.............................................. 26 0 1 1.00 1 0 1 0 0 0
....CAGTGTTGTGTATTGCAAACTGGC..................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1
.....................AACTGGCTAACACTTTTACTTGTGAA.................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
..................................................................GCTGCCCTCGCTTCGCAGCGTG......................................................................................... 22 3 1 1.00 1 0 0 0 0 0
.................................................................AGCTGCCCTCGCTTCGCAG............................................................................................. 19 2 1 1.00 1 0 0 0 0 0
............................................................................................................GCACTTCCAAAGAACATCTGAGCCGCTG......................................... 28 0 1 1.00 1 0 1 0 0 0
............................TAACACTTTTACTTGTGAATGGGCTAGA......................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0
................................................................................................................TTCCAAAGAACATCTGAGCCGC........................................... 22 0 1 1.00 1 0 0 0 1 0
.................TGCAAACTGGCTAACACTTTTACTTGTGA................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
...................................................................................................................CAAAGAACATCTGAGCCGCTGCCACT.................................... 26 0 1 1.00 1 0 0 1 0 0
...........................................................................................................CGCACTTCCAAAGAACATCTGAGC.............................................. 24 0 1 1.00 1 1 0 0 0 0
.................................................................................................................TCCAAAGAACATCTGAGCCGCTGCCACT.................................... 28 0 1 1.00 1 0 0 1 0 0
.............................................................................................................CACTTCCAAAGAACATCTGAGCCGCTGCCAC..................................... 31 0 1 1.00 1 0 1 0 0 0
...................................................................................................................................................CCCAGCTAGAAATCAAAAAA.......... 20 3 20 0.10 2 2 0 0 0 0
................................................................CAGCTGCCCTCGCTTCGCA.............................................................................................. 19 3 20 0.05 1 0 0 0 0 0
.................................................................................................ACTTGGCCAGCGCAC................................................................. 15 1 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 2R:2140197-2140373 - dsi_137 CGTCACCGGCTT-TTTTGCTTTTTAGCTGGCGCATCGAGTGGC-A-GCGGCTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGTCGTCGGAAAAACG---CTGAGAAGCG-AG-----TGCAGCT--AA--AGAAAAATCTAGC-CAA-TT-------CACAAGT-------AAAAGTGTT---------AGCCAGTTTGCA------ATACACAACACT--GTTGA
droSec2 scaffold_1:1073587-1073755 - C--------CAT-TTTTGCTTTTTAGCTGGCGCATCGGGTGGA-A-GCGGCTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGTCGTCGGAAAAGCG---CTGAGAAGCG-AA-----TGCAGCT--AA--AGAAAAATCTAGC-CCA-TT-------CACAAGT-------AAAAGTGTT---------AGCCAGTTTGCA------ATACACAACACT--GTTGA
dm3 chr2R:3416658-3416839 - CGTCACCGGCTT-TTTTGCTTTTTAGCTGCCGCATCGAGTGAA---GCGGCTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGTCGTCGGAAAAGCG---CCGAGAAGCA-AT-----TGCAGCT--AA--AGAAAAATCTAGC-CAA-TT-------CACAAGT-------AAAAGTGTT---------AGTCAGTTTGTATAATAAATACACAACGCA--GTTGA
droEre2 scaffold_4929:19182000-19182172 + C---ACCGGCTT--TTTGCTTTTTAGCTGGCTCATCGACCGAA---TCGCCTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGACGTGGGAAAAGCG---CTGAGAAGCG-AG-----TGCAGC---AA-AAGAAAAATCTAGC-CAA-TT-------CACAAGT-------AAAAGTGTT---------ACCCAGTTTGCA------ATACACACCGCA--GTATA
droYak3 2L:16093878-16094018 - C-----CGGCT----GTGCTTTTTAGCTGGCTCATCGGCAGAA---TCGCCTCAGATGTTCTTTGAAAGTGCGCTGGTCAAGACGTCGA---------------------AG-----TGCAGCT--AAAGAGAAAAATCTAGC-CAA-TT-ACAAG-TACAAGT-------AAAAGTGTT---------ACCCAGTTTGC--------------------------
droEug1 scf7180000409672:5431348-5431506 - CGTCACCGGCTT-TTTTGCTTTTTAGCTGGCGCATCGACTGAA-A-TCATTTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGACGTGAGAAAAGC--AACC--GTAGCT-AG-----TGCAGCT--AA-AAGAAAAATCTAGC-CAA-TT-------TACAAGT-------AAAAGTGCC---------AACCAGTTTAC--------------------------
droBia1 scf7180000302292:2726013-2726180 + CGTCACCGGCTT-TTTTGCTTTTTAGCTGGCGCATCGACTGAA-A-ACGCCTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGACGTGAGAAAATCGTATCC--CAAGCG-AG-----TGCAGCG--AA-GAGAAAAATCTAGC-CAA-TT-------CACAAGT-------AAAAGTGTT---------AACCAGTTTACC--------------CCCA--GT---
droTak1 scf7180000416016:19063-19221 - CGTCACCGGCTT-TTTTGCTTTTTAGCTGGCGCATCGACTGAA-A-ACGTTTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGACGTGAGAAAATT--AGCC--GAAGCG-AG-----TGCAGCT--AA-GAGAAAAATCTAGC-CAA-TT-------CACCAGT-------AAAAGTGTT---------AACCAGTTTAC--------------------------
droEle1 scf7180000491347:252812-252979 - CGTGACCGGCTT-TTTTGCTTTTTAGCTGGCGCATCGACTGAA-A-ACGCTTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGACGTGAGAAAAAT--ATCC--GAAGCG-AG-----TGCAGCG--AA-AAGAAAAATCTAGC-CAA-TT-------CACAAGT-------AAAAGTGTT---------AACCAGCTTACC------------AA--CA--GT-GC
droRho1 scf7180000780160:30774-30943 - CGTCACCGGCTT-TTTTGCTTTTTAGCTGGCGCATCGACTGAA-A-ACTTTTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGACGTGAAACAAATTCAGCC--AAAGCG-AG-----TGCAGCT--AA-GAGAAAAATCTAGC-CAA-TT-------CACAAGT-------AAAAGTGTT---------AACCAGTTTACC------AT--------CA--GT-GC
droFic1 scf7180000453948:174233-174391 - CGTCACCGGCTT-TTTTGCTTTTTAGCTGGCGCATCGACTGAA-A-TCGTTTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGACGTGAAAAAAAC---------AAGCA-AG-----TGCAGCT--AA-AAGAAAAATCTTGC-CAA-TT-------TACAAGT-------AAAAGTGTT---------AACCAGTTTACC--------------------GTT-G
droKik1 scf7180000302471:24471-24612 + CGTCACCGGCTT-TTTTGCTTTTTAGCTGGCGCATCGACCGAG-C-TCGCCTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGACGTAAAACA-------------AAAA-AG-----TGCAGCT--AA-AAGAAAAATCTA---------------------GT-------AAAAGTGCT---------AAAGAGTTAAAA------AA----------------A
droAna3 scaffold_13266:9941103-9941242 - C-----CGGCTT-TTTTGCTTTTTAGCTGGCGCATCGGCGTTA-G-CGGGCTCAGATGTTCTTTGGAAGTGCGCTGGCCAAGACGT-------------------------G-----TGCAGCG--AA-AAGAAAGATCTGCT-TTT-GTTAAAAGTTAAAAGTTTGAAAGAAAAGTGTC---------AA-----------------------------------
droBip1 scf7180000396759:1657425-1657579 - GCTCGCCGGCTT-TTTTGCTTTTTAGCTGGCGCATCGGCGTTA-G-CGGGCTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGACGT-------------------------G-----TGCAGCG--AA-AAGAAAAATCTACTTCAA-GT-------CTCAAGCT--AAAGAAAAGTGCT---------AACTAAAGTGCC------ATTCAAAA----------T
dp5 3:12326219-12326401 + C-----CGGCCTGTTTTGCTT-TTAGCTGCCGCTCCGGCGCAT-TTACGACTGAGTTGTTCTTTGGAAGTGCGCTGGTCAAGACGCGAAA--A-----TCT--GAAACAAAG-----TGCATCA--AA-GAGAAAGATCCGTC-TAAAAA-------TATTAGT-------AAAAGTGTTAAAAGAAAG----TGCTAGCAGTACTAATTGACAAAATTGTGCTAC
droPer2 scaffold_44:508342-508524 + C-----CGGCCTGTTTTGCTT-TTAGCTGCCGCTCCGGCGCAT-TTACGACTGAGTTGTTCTTTGGAAGTGCGCTGGTCAAGACGCGAAA--A-----TCT--GAAACAAAG-----TGCAGCA--AA-GAGAAAGATCCGTC-TAAAAA-------TATTAGT-------AAAAGTGTTAAAAGAAAG----TGTTAGCAGTACTAATTTACAAAATTGTGCTAC
droGri2 scaffold_15245:17100231-17100408 - CGCTGCCGGTTTATTTTGCTTTTTAGAGCGTACATCGTGTGGAAA-AAATGTTAGTTGTTCTTTGGAAGTGCGCTCGAGAAGTC---CAA--C-----GTT--GGAGCGAGTTGCTCTGCAAATAGAA-AAGAAAAATCTG----------------------A-------GAAAGTGTTAAAAAGAAC----T-TAAGCAAACAAAGTGAATAAGCTTACAACAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
CGTCACCGGCTT-TTTTGCTTTTTAGCTGGCGCATCGAGTGGC-A-GCGGCTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGTCGTCGGAAAAACG---CTGAGAAGCG-AG-----TGCAGCT--AA--AGAAAAATCTAGC-CAA-TT-------CACAAGT-------AAAAGTGTT---------AGCCAGTTTGCA------ATACACAACACT--GTTGASizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
.....................................................AGATGTTCTTTGGAAGTG...........................................................................................................................................................18146.00460319000400002
........................................................................GCTGGTCAAGTCGTCGGAAAAACG---CT.............................................................................................................................26114.00140014000000000
...........................................................................GGTCAAGTCGTCGGAAAAACG---CT.............................................................................................................................23112.0012009300000000
............................................................................GTCAAGTCGTCGGAAAAACG---CT.............................................................................................................................22111.0011029000000000
....................................................................................GTCGGAAAAACG---CTGAGAAG.......................................................................................................................20110.0010061300000000
..............................................................................CAAGTCGTCGGAAAAACG---CT.............................................................................................................................2018.008007100000000
........................................................................GCTGGTCAAGTCGTCGGA........................................................................................................................................1818.008130101000002
............................................................................GTCAAGTCGTCGGAAAAAC...................................................................................................................................1914.004030100000000
....................................................................................GTCGGAAAAACG---CTGAGAA........................................................................................................................1913.003021000000000
............................................................................GTCAAGTCGTCGGAAAAACG---CTGAGA.........................................................................................................................2613.003002100000000
.....................................................AGATGTTCTTTGGAAGTGCGC........................................................................................................................................................2113.003100011000000
............................................................................GTCAAGTCGTCGGAAAAACG---...............................................................................................................................2012.002020000000000
.....................................................AGATGTTCTTTGGAAGTGCG.........................................................................................................................................................2012.002001000000001
...........................................................................GGTCAAGTCGTCGGAAAAACG---CTGAGA.........................................................................................................................2712.002001100000000
.........................................................................CTGGTCAAGTCGTCGGAA.......................................................................................................................................1812.002020000000000
......................................................................................CGGAAAAACG---CTGAGAAG.......................................................................................................................1812.002020000000000
................................................................................AGTCGTCGGAAAAACG---CT.............................................................................................................................1812.002000000000002
...................................................................AGTGCGCTGGTCAAGTCGTC...........................................................................................................................................2012.002000200000000
....................................................................................................................................................................................................TTGCA------ATACACAACACT--G....1812.002011000000000
.....................................................................................TCGGAAAAACG---CTGAGAAG.......................................................................................................................1912.002020000000000
.........................................................GTTCTTTGGAAGTGCGCTG......................................................................................................................................................1912.002001000000001
.....................................................................................................................................AAAATCTAGC-CAA-TT-------CACAAGT-------AAAAGT.................................................2812.002000000200000
.................................................................................GTCGTCGGAAAAACG---CTGAGAAGCG-....................................................................................................................2512.002000002000000
.............................................................TTTGGAAGTGCGCTGGTCA..................................................................................................................................................1912.002000200000000
.........................................................................CTGGTCAAGTCGTCGGAAAAAC...................................................................................................................................2212.002011000000000
..........................................................................................................................................CTAGC-CAA-TT-------CACAAGT-------AAAAGT.................................................2311.001000000100000
.....................................................................TGCGCTGGTCAAGTCGTC...........................................................................................................................................1811.001000100000000
............................................................................GTCAAGTCGTCGGAAAAA....................................................................................................................................1811.001010000000000
...................................................................................................................................................................................T---------AGCCAGTTTGCA------ATACAC.............1911.001000000100000
............................................................................................AACG---CTGAGAAGCG-AG-----TGCAGCT--AA--AGA.............................................................................................2811.001000001000000
.................................................................GAAGTGCGCTGGTCAAGTCGTC...........................................................................................................................................2211.001000000100000
.....................................................AGATGTTCTTTGGAAGT............................................................................................................................................................1711.001000000000001
............................................................................................................G-AG-----TGCAGCT--AA--AGAAAAATCTAGC-C.................................................................................2611.001000000100000
........................................................................GCTGGTCAAGTCGTCGGAAAAA....................................................................................................................................2211.001001000000000
..........................................................TTCTTTGGAAGTGCGCTGGTCAAG................................................................................................................................................2411.001010000000000
................................................................GGAAGTGCGCTGGTCAAGT...............................................................................................................................................1911.001000000100000
.........................................................................CTGGTCAAGTCGTCGGAAAAACG---CT.............................................................................................................................2511.001001000000000
..............................................................................................................................................................................AGTGTT---------AGCCAGTTTGCA------...................1811.001100000000000
....................................................................................GTCGGAAAAACG---CTGAGA.........................................................................................................................1811.001010000000000
...................................................TCAGATGTTCTTTGGAAGTGCGCTG......................................................................................................................................................2511.001000100000000
........................................................TGTTCTTTGGAAGTG...........................................................................................................................................................1511.001000000000001
.........................................................GTTCTTTGGAAGTGCGCTGG.....................................................................................................................................................2011.001000000000001
...........................................................................................AAACG---CTGAGAAGCG-AG-----TGCAGCT--AA--................................................................................................2611.001000010000000
................................................................................AGTCGTCGGAAAAACG---CTGAGAAGCG-AG-----T............................................................................................................2911.001000100000000
...................................................TCAGATGTTCTTTGGAAGTGCGCT.......................................................................................................................................................2411.001000000100000
.....................................................................TGCGCTGGTCAAGTCGTCGGA........................................................................................................................................2111.001100000000000
..................................................................AAGTGCGCTGGTCAAGTCGT............................................................................................................................................2011.001100000000000
.......................................................................................................................CAGCT--AA--AGAAAAATCTAGC-..................................................................................2011.001000010000000
.....................................................AGATGTTCTTTGGAAGTGC..........................................................................................................................................................1911.001010000000000
.....................................................................................TCGGAAAAACG---CTGAGAAGC......................................................................................................................2011.001010000000000
.......................................................................CGCTGGTCAAGTCGTCGGAAAAACG---CT.............................................................................................................................2711.001001000000000
.................................................................................................................................................................................GTT---------AGCCAGTTTGCA------ATACACA............2211.001000000100000
.......................................................................................................GAAGCG-AG-----TGCAGCT--AA--AGA.............................................................................................2011.001000000000100
.............................................................................TCAAGTCGTCGGAAAAACG---CTGAGA.........................................................................................................................2511.001001000000000
.........................................................GTTCTTTGGAAGTGCGC........................................................................................................................................................1711.001000000000001
...............................................................................AAGTCGTCGGAAAAACG---CTGAGAAGC......................................................................................................................2611.001100000000000
...............................................................................AAGTCGTCGGAAAAACG---CT.............................................................................................................................1911.001001000000000
............................................................................................AACG---CTGAGAAGCG-AG-----TGC..........................................................................................................1911.001000001000000
......................................................................................CGGAAAAACG---CTGAGAAGCG-AG-----TGC..........................................................................................................2511.001000010000000
............................................................CTTTGGAAGTGCGCTGGT....................................................................................................................................................1811.001000000000001
............................................................................GTCAAGTCGTCGGAAAAACG---CTGA...........................................................................................................................2411.001001000000000
......................................................................................................................................AAATCTAGC-CAA-TT-------CACAAGT-------AAAAGT.................................................2711.001000000100000
.........................................................................................AAAAACG---CTGAGAAGCG-AG-----.............................................................................................................1911.001000000000001
..............................................................................................CG---CTGAGAAGCG-AG-----TGCAGCT--AA--AGA.............................................................................................2611.001000000100000
....................................................CAGATGTTCTTTGGAAGTGCGCTGG.....................................................................................................................................................2511.001000000000001
.......................................................ATGTTCTTTGGAAGTGCGCT.......................................................................................................................................................2011.001000000100000
..................................................................................................................................................A-TT-------CACAAGT-------AAAAGTGTT---------AGCC.................................2311.001000000100000
.................................................................................GTCGTCGGAAAAACG---CTG............................................................................................................................1811.001000000000001
..........................................................................................................................................CTAGC-CAA-TT-------CACAAGT-------AAAAGTGT...............................................2511.001000000100000
............................................................................................AACG---CTGAGAAGCG-AG-----TG...........................................................................................................1811.001000000000001
........................................................................GCTGGTCAAGTCGTCGGAAAAACG---C..............................................................................................................................2511.001000100000000
.....................................................................................................GAGAAGCG-AG-----TGCAGCT--AA--AGAAAAATC.......................................................................................2811.001000000100000
........................................................................GCTGGTCAAGTCGTCGGAAAAAC...................................................................................................................................2311.001001000000000
droSec2
C--------CAT-TTTTGCTTTTTAGCTGGCGCATCGGGTGGA-A-GCGGCTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGTCGTCGGAAAAGCG---CTGAGAAGCG-AA-----TGCAGCT--AA--AGAAAAATCTAGC-CCA-TT-------CACAAGT-------AAAAGTGTT---------AGCCAGTTTGCA------ATACACAACACT--GTTGASizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
.....................................................AGATGTTCTTTGGAAGTG...........................................................................................................................................................18147.0047017291
.....................................................AGATGTTCTTTGGAAGTGC..........................................................................................................................................................1918.0080530
.....................................................AGATGTTCTTTGGAAGTGCG.........................................................................................................................................................2016.0061131
..............................................................................CAAGTCGTCGGAAAAGCG---CTGAGAAGC......................................................................................................................2715.0053200
............................................................................GTCAAGTCGTCGGAAAAGCG---CTGA...........................................................................................................................2415.0051040
.....................................................AGATGTTCTTTGGAAGTGCGCTGGTC...................................................................................................................................................2614.0042200
.....................................................AGATGTTCTTTGGAAGTGCGC........................................................................................................................................................2113.0030300
.....................................................................TGCGCTGGTCAAGTCGTCGGAAAAGCG---...............................................................................................................................2713.0033000
.....................................................AGATGTTCTTTGGAAGTGCGCTGGT....................................................................................................................................................2512.0021010
...........................................................................................................................................................................AAAAGTGTT---------AGCCAGTTTGCA------ATA................2412.0021100
...............................................................................................................A-----TGCAGCT--AA--AGAAAAATCT......................................................................................2012.0020110
......................................................GATGTTCTTTGGAAGTGCG.........................................................................................................................................................1912.0020002
............................................................................GTCAAGTCGTCGGAAAAGCG---...............................................................................................................................2012.0020011
.........................................................................CTGGTCAAGTCGTCGGAAAAGC...................................................................................................................................2212.0022000
...................................................TCAGATGTTCTTTGGAAGTG...........................................................................................................................................................2012.0020110
.....................................................AGATGTTCTTTGGAAGTGCGCTGG.....................................................................................................................................................2411.0010010
....................................................................GTGCGCTGGTCAAGTCGT............................................................................................................................................1811.0010001
............................................................................GTCAAGTCGTCGGAAAAGCG---CTGAGA.........................................................................................................................2611.0010010
......................................................................GCGCTGGTCAAGTCGTCGGAAAAGCG---...............................................................................................................................2611.0011000
............................................................................GTCAAGTCGTCGGAAAAG....................................................................................................................................1811.0010010
........................................................................GCTGGTCAAGTCGTCGGA........................................................................................................................................1811.0010100
.......................................................................CGCTGGTCAAGTCGTCGGA........................................................................................................................................1911.0010010
.....................................................................................................GAGAAGCG-AA-----TGCAGCT--AA--AG..............................................................................................2111.0011000
.......................................................................CGCTGGTCAAGTCGTCGGAAAAG....................................................................................................................................2311.0010010
.............................................................................TCAAGTCGTCGGAAAAGCG---CTGAGAAGCG-....................................................................................................................2911.0010100
................................................................................AGTCGTCGGAAAAGCG---CTGAGAA........................................................................................................................2311.0011000
..........................................................................................................GCG-AA-----TGCAGCT--AA--AGAAAAA.........................................................................................2111.0011000
..........................................................................................................................CT--AA--AGAAAAATCTAGC-CCA-T.............................................................................2111.0010100
...................................................................................................................................................................T-------AAAAGTGTT---------AGCCAGTT.............................1811.0010100
............................................................................................................G-AA-----TGCAGCT--AA--AGAAAAATCTAGC-..................................................................................2511.0010100
...............................................................................AAGTCGTCGGAAAAGCG---CTGAGAAGC......................................................................................................................2611.0010100
...........................................................................................AAGCG---CTGAGAAGCG-AA-----TGCA.........................................................................................................2111.0010001
...............................................................................................................A-----TGCAGCT--AA--AGAAAAATCTAGC-CCA-..............................................................................2611.0010010
.......................................................................CGCTGGTCAAGTCGTCGG.........................................................................................................................................1811.0010100
...................................................TCAGATGTTCTTTGGAAG.............................................................................................................................................................1811.0010100
.........................................................GTTCTTTGGAAGTGCGCTGGTC...................................................................................................................................................2211.0011000
..............................................................................................................AA-----TGCAGCT--AA--AGAAAAATC.......................................................................................2011.0010010
...........................................................................................................CG-AA-----TGCAGCT--AA--AGAAA...........................................................................................1811.0010010
...................................................TCAGATGTTCTTTGGAAGTGC..........................................................................................................................................................2111.0010100
............................................................................................................G-AA-----TGCAGCT--AA--AGAAAAAT........................................................................................2011.0011000
....................................GGGTGGA-A-GCGGCTCAGATGTTCTTTG.................................................................................................................................................................2711.0011000
....................................................................GTGCGCTGGTCAAGTCGTC...........................................................................................................................................1911.0010100
...................................................................AGTGCGCTGGTCAAGTCGTC...........................................................................................................................................2011.0010100
............................................................................GTCAAGTCGTCGGAAAAGCG---C..............................................................................................................................2111.0010010
..............................CGCATCGGGTGGA-A-GCGGC...............................................................................................................................................................................1911.0010010
...................................................................................CGTCGGAAAAGCG---CTGAGAAGCG-A...................................................................................................................2411.0011000
...................................................................AGTGCGCTGGTCAAGTCGTCGGAA.......................................................................................................................................2411.0011000
....................................................................GTGCGCTGGTCAAGTCGTCGGAAAAGC...................................................................................................................................2711.0011000
.................................................................GAAGTGCGCTGGTCAAGTCGTCGGA........................................................................................................................................2511.0011000
............................................................................................AGCG---CTGAGAAGCG-AA-----TGCAGCT--A...................................................................................................2411.0010010
...........................................................................................................CG-AA-----TGCAGCT--AA--AGAAAAATCT......................................................................................2311.0011000
..............................................................................CAAGTCGTCGGAAAAGCG---CTGAGAAG.......................................................................................................................2611.0011000
........................................................................GCTGGTCAAGTCGTCGGAAAAGCG---CTGA...........................................................................................................................2811.0011000
...................................................................................CGTCGGAAAAGCG---CTGAGAAGCG-AA-----TG...........................................................................................................2711.0010001
............................................................................................AGCG---CTGAGAAGCG-AA-----TG...........................................................................................................1811.0010010
.........................................................................CTGGTCAAGTCGTCGGAAAAGCG---CTGA...........................................................................................................................2711.0011000
..............................................................................................................................................................ACAAGT-------AAAAGTGTT---------AGCCAGTTTGC..........................2611.0011000
....................................................................................GTCGGAAAAGCG---CTGAGAA........................................................................................................................1911.0010001
............................................................................GTCAAGTCGTCGGAAAAGCG---CTGAGAAG.......................................................................................................................2811.0011000
.....................................................................................................................TGCAGCT--AA--AGAAAAATCTA.....................................................................................2011.0011000
..........................................................TTCTTTGGAAGTGCGCTGGTCAAGTC..............................................................................................................................................2611.0011000
............................GGCGCATCGGGTGGA-A-GCGGCTCAGATG........................................................................................................................................................................2811.0011000
..............................................................................................................AA-----TGCAGCT--AA--AGAAAAATCT......................................................................................2111.0011000
droEre2
C---ACCGGCTT--TTTGCTTTTTAGCTGGCTCATCGACCGAA---TCGCCTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGACGTGGGAAAAGCG---CTGAGAAGCG-AG-----TGCAGC---AA-AAGAAAAATCTAGC-CAA-TT-------CACAAGT-------AAAAGTGTT---------ACCCAGTTTGCA------ATACACACCGCA--GTATASizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
......................................................AGATGTTCTTTGGAAGTGC.........................................................................................................................................................1913.003003000
...........................................................................................................................................CTAG-CCA-AT-------TCACAAG-------TAAAAGT................................................2313.003001200
.....................................................................GTGCGCTGGTCAAGACGTGGGA.......................................................................................................................................2213.003002010
...............................................................................................................A-----GTGCAG---CA-AAAGAAAAAT.......................................................................................1912.002101000
.............................................................CTTTGGAAGTGCGCTGGTC..................................................................................................................................................1912.002101000
.............................................................CTTTGGAAGTGCGCTGGTCAAGAC.............................................................................................................................................2412.002000110
.........................................................................GCTGGTCAAGACGTGGGA.......................................................................................................................................1812.002001100
......................................................................................................GAGAAGC-GA-----GTGCAG---CA-AAAG.............................................................................................2112.002100100
......................................................AGATGTTCTTTGGAAGTGCGCTGGT...................................................................................................................................................2512.002001100
.....................................................................GTGCGCTGGTCAAGACGTG..........................................................................................................................................1912.002100100
......................................................AGATGTTCTTTGGAAGTG..........................................................................................................................................................1812.002001100
..........................................................GTTCTTTGGAAGTGCGCTGGTCAAGAC.............................................................................................................................................2711.001000001
...........................................................................................AAAGC---GCTGAGAAGC-GA-----GTGC.........................................................................................................2111.001100000
......................................................................................................GAGAAGC-GA-----GTGCAG---CA-AAAGAAA..........................................................................................2411.001001000
....................................................................................CGTGGGAAAAGC---GCTGAGAAGC-GA-----GTGC.........................................................................................................2811.001000001
......................................................................................................GAGAAGC-GA-----GTGCAG---CA-AAAGAAAAAT.......................................................................................2711.001001000
.............................................................................................................................................AG-CCA-AT-------TCACAAG-------TAAAAGTGT---------.....................................2311.001001000
........................................................................................................................................AATCTAG-CCA-AT-------TCACAAG-------T......................................................2011.001000100
.............................................................................................AGC---GCTGAGAAGC-GA-----GTGCAG---C...................................................................................................2211.001000100
..........................................................................................AAAAGC---GCTGAGAAGC-GA-----GTGCA........................................................................................................2311.001000010
.............................................................................GTCAAGACGTGGGAAAAGC---GCTG...........................................................................................................................2311.001000100
.........................................................................................................................AG---CA-AAAGAAAAATCTAG-CC................................................................................2011.001000001
......................................................................................................................................AAAATCTAG-CCA-AT-------TCACAAG-------TA.....................................................2311.001000010
...............................................................................................................................................................ACAAG-------TAAAAGTGT---------TACCCAGTTTGC------...................2611.001001000
.......................................................................GCGCTGGTCAAGACGTGGGAAAAGC---G..............................................................................................................................2611.001000100
....................................................................................CGTGGGAAAAGC---GCTGAGAAGC-....................................................................................................................2211.001001000
.............................................................CTTTGGAAGTGCGCTGGTCAAGA..............................................................................................................................................2311.001000010
.........................................................................GCTGGTCAAGACGTGGGAA......................................................................................................................................1911.001001000
............................................................................................................C-GA-----GTGCAG---CA-AAAGAAAAATCTA....................................................................................2411.001000100
..............................................................................TCAAGACGTGGGAAAAGC---G..............................................................................................................................1911.001000100
.............................................................................................AGC---GCTGAGAAGC-GA-----GTGCAG---CA-AAAG.............................................................................................2711.001100000
.............................................................................................................................................AG-CCA-AT-------TCACAAG-------TAAAAGT................................................2111.001001000
..........................................................................................AAAAGC---GCTGAGAAGC-GA-----GTGCAG---C...................................................................................................2511.001000001
..............................................................................................................................................................................AAGTGT---------TACCCAGTTTGC------...................1811.001000100
.............................................................................GTCAAGACGTGGGAAAAGC---G..............................................................................................................................2011.001001000
..................................................................GAAGTGCGCTGGTCAAGAC.............................................................................................................................................1911.001001000
............................................................TCTTTGGAAGTGCGCTGGTC..................................................................................................................................................2011.001000100
......................................................................................TGGGAAAAGC---GCTGAGAAGC-....................................................................................................................2011.001000001
..............................................................................................................................................................................................ACCCAGTTTGC------AATACACACCGC--A....2411.001001000
..............................................................................TCAAGACGTGGGAAAAGC---...............................................................................................................................1811.001000100
.......................................................GATGTTCTTTGGAAGTGCGCT......................................................................................................................................................2111.001001000
..........................................................GTTCTTTGGAAGTGCGCTGGTCA.................................................................................................................................................2311.001000100
..............................................................................................GC---GCTGAGAAGC-GA-----GTGCAG---CA-AAAGA............................................................................................2711.001000100
.........................................................TGTTCTTTGGAAGTGCGCTGGT...................................................................................................................................................2211.001000100
..............................................................TTTGGAAGTGCGCTGGTCA.................................................................................................................................................1911.001000100
.....................................................................................................TGAGAAGC-GA-----GTGCAG---CA-AAAGA............................................................................................2311.001001000
........................................................................................................................CAG---CA-AAAGAAAAATCTAG-..................................................................................1911.001000100
...................................................................................ACGTGGGAAAAGC---GCTGAG.........................................................................................................................1911.001001000
.........................................................TGTTCTTTGGAAGTGCGCTG.....................................................................................................................................................2011.001000100
..................................................................................GACGTGGGAAAAGC---GCTGAGAAGC-GA-----.............................................................................................................2611.001000100
...................................................................................................................................................................G-------TAAAAGTGT---------TACCCAGTTTGC------...................2211.001000100
.....................................................................................GTGGGAAAAGC---GCTGAGAAG......................................................................................................................2011.001001000
...................................................................................................................................................................................T---------TACCCAGTTTGC------AATACA.............1911.001000010
.........................................................................GCTGGTCAAGACGTGGGAAAAGC---...............................................................................................................................2311.001001000
.............................................................................GTCAAGACGTGGGAAAAGC---GCTGA..........................................................................................................................2411.001001000
.............................................................................GTCAAGACGTGGGAAAAG...................................................................................................................................1811.001000100
.........................................................................GCTGGTCAAGACGTGGGAAA.....................................................................................................................................2011.001000100
................................................................TGGAAGTGCGCTGGTCAAGACGT...........................................................................................................................................2311.001000010
.............................................................CTTTGGAAGTGCGCTGGTCAAGACGT...........................................................................................................................................2611.001001000
.......................................................................GCGCTGGTCAAGACGTGGGA.......................................................................................................................................2011.001001000
.................................................................................................................................................................AAG-------TAAAAGTGT---------TACCCAGTT............................2111.001001000
.......................................................................................GGGAAAAGC---GCTGAGAAGC-GA-----.............................................................................................................2111.001001000
...............................................................................CAAGACGTGGGAAAAGC---GCT............................................................................................................................2011.001001000
..............................................................TTTGGAAGTGCGCTGGTC..................................................................................................................................................1811.001000010
..........................................................GTTCTTTGGAAGTGCGCTGGTCAAGA..............................................................................................................................................2611.001000010
..........................................................GTTCTTTGGAAGTGCGCTGG....................................................................................................................................................2011.001000010
............................................................................GGTCAAGACGTGGGAAAAGC---GCT............................................................................................................................2311.001001000
............................................................................................AAGC---GCTGAGAAGC-GA-----GTGCAG---C...................................................................................................2311.001000100
.....................................................................................GTGGGAAAAGC---GCTGAGAAGC-....................................................................................................................2111.001001000
droYak3
C-----CGGCT----GTGCTTTTTAGCTGGCTCATCGGCAGAA---TCGCCTCAGATGTTCTTTGAAAGTGCGCTGGTCAAGACGTCGA---------------------AG-----TGCAGCT--AAAGAGAAAAATCTAGC-CAA-TT-ACAAG-TACAAGT-------AAAAGTGTT---------ACCCAGTTTGC--------------------------SizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
..........................................................GTTCTTTGAAAGTGCGCTGGT...................................................................................................................................................2114.0040040000
.................................................................GAAAGTGCGCTGGTCAAGA..............................................................................................................................................1913.0030030000
.............................................................CTTTGAAAGTGCGCTGGTCAAGACGTC..........................................................................................................................................2713.0030021000
..............................................................TTTGAAAGTGCGCTGGTCAAGACGT...........................................................................................................................................2512.0020020000
..................................................................................GACGTCG---------------------AA-----GTGCAGC--TAA.................................................................................................1912.0021000010
.....................................................................................GTCG---------------------AA-----GTGCAGC--TAAAGAG.............................................................................................2012.0020020000
...............................................................................CAAGACGTCG---------------------AA-----GTGCAGC--T...................................................................................................2012.0020010100
.....................................................................................GTCG---------------------AA-----GTGCAGC--TAAAGAGAA...........................................................................................2212.0020000200
.........................................................................GCTGGTCAAGACGTCG---------------------AA-----GTGC.........................................................................................................2212.0020020000
........................................................................................G---------------------AA-----GTGCAGC--TAAAGAGAAAA.........................................................................................2112.0020020000
....................................................................AGTGCGCTGGTCAAGACG............................................................................................................................................1812.0020000200
..........................................................................CTGGTCAAGACGTCG---------------------AA-----GTGCAGC--T...................................................................................................2512.0020020000
.....................................................................GTGCGCTGGTCAAGACGTCG---------------------AA-----GTGC.........................................................................................................2612.0020020000
.................................................................GAAAGTGCGCTGGTCAAGACGTC..........................................................................................................................................2312.0020020000
...............................................................TTGAAAGTGCGCTGGTCAAGACGT...........................................................................................................................................2412.0020010010
..............................................................................................................................................G-CCA-AT-TACAA-GTACAAG-------T......................................................1911.0010000010
..................................................................AAAGTGCGCTGGTCAAGACGTC..........................................................................................................................................2211.0010010000
...............................................................TTGAAAGTGCGCTGGTCAA................................................................................................................................................1911.0010010000
...............................................................TTGAAAGTGCGCTGGTCAAGACGTC..........................................................................................................................................2511.0010010000
.........................................................................GCTGGTCAAGACGTCG---------------------AA-----GTGCA........................................................................................................2311.0010010000
.............................................................................GTCAAGACGTCG---------------------AA-----GTGC.........................................................................................................1811.0010000001
...............................................................................................................................AAAGAGAAAAATCTAG-CCA-AT-TACAA-GT...................................................................2811.0010010000
............................................................TCTTTGAAAGTGCGCTGGTCAAGAC.............................................................................................................................................2511.0010010000
.....................................................................................GTCG---------------------AA-----GTGCAGC--TAAAGAGA............................................................................................2111.0010010000
........................................................................................................................................AATCTAG-CCA-AT-TACAA-GTACAAG-------T......................................................2511.0010000010
................................................................TGAAAGTGCGCTGGTCAAG...............................................................................................................................................1911.0010010000
..............................................................TTTGAAAGTGCGCTGGTCAAGA..............................................................................................................................................2211.0010010000
............................................................................GGTCAAGACGTCG---------------------AA-----GTGCAGC--TAAAG...............................................................................................2711.0010010000
.....................................................................GTGCGCTGGTCAAGACGTCG---------------------AA-----GT...........................................................................................................2411.0010010000
..........................................................GTTCTTTGAAAGTGCGCTGGTCAAG...............................................................................................................................................2511.0010010000
............................................................TCTTTGAAAGTGCGCTGGTCAAG...............................................................................................................................................2311.0010010000
........................................................................CGCTGGTCAAGACGTCG---------------------AA-----GTGCAGC--T...................................................................................................2711.0010010000
...............................................................................CAAGACGTCG---------------------AA-----GTGCAGC--....................................................................................................1911.0010010000
...............................................................................CAAGACGTCG---------------------AA-----GTGCAGC--TAAAGAG.............................................................................................2611.0010010000
.............................................................CTTTGAAAGTGCGCTGGTCAAGACGT...........................................................................................................................................2611.0010010000
.............................................................................GTCAAGACGTCG---------------------AA-----GTGCAGC--TAAAGA..............................................................................................2711.0010000100
.........................................................TGTTCTTTGAAAGTGCGCTGGTCAA................................................................................................................................................2511.0010010000
.......................................................................................CG---------------------AA-----GTGCAGC--TAAAGAGA............................................................................................1911.0010010000
......................................................................................................................TGCAGC--TAAAGAGAAAAATCTAG-..................................................................................2311.0010000100
............................................................TCTTTGAAAGTGCGCTGGTCA.................................................................................................................................................2111.0010010000
..............................................................................TCAAGACGTCG---------------------AA-----GTGCAGC--TAAAGAGA............................................................................................2811.0010000100
.....................................................................GTGCGCTGGTCAAGACGTCG---------------------AA-----G............................................................................................................2311.0010000001
.........................................................TGTTCTTTGAAAGTGCGCTGGTCAAGA..............................................................................................................................................2711.0010010000
.....................................................................GTGCGCTGGTCAAGACGTCG---------------------A...................................................................................................................2111.0011000000
...................................................................AAGTGCGCTGGTCAAGACGTC..........................................................................................................................................2111.0010010000
................................................................TGAAAGTGCGCTGGTCAAGACGT...........................................................................................................................................2311.0010010000
....................................................................AGTGCGCTGGTCAAGACGTCG---------------------AA-----GT...........................................................................................................2511.0010000001
.............................................................CTTTGAAAGTGCGCTGGTCAAGAC.............................................................................................................................................2411.0010010000
............................................................................GGTCAAGACGTCG---------------------AA-----GTGCAG.......................................................................................................2111.0010000010
.........................................................................GCTGGTCAAGACGTCG---------------------AA-----GTGCAGC--TA..................................................................................................2711.0010000010
.......................................................................................................................GCAGC--TAAAGAGAAAAATCT.....................................................................................2011.0010010000
....................................................................AGTGCGCTGGTCAAGACGTCG---------------------....................................................................................................................2111.0010010000
.............................................................................GTCAAGACGTCG---------------------AA-----GTGCAGC--....................................................................................................2111.0010000001
.....................................................................................GTCG---------------------AA-----GTGCAGC--TAAAGAGAAAAATCT.....................................................................................2811.0010010000
.....................................................................GTGCGCTGGTCAAGACGTCG---------------------AA-----GTG..........................................................................................................2511.0010010000
....................................................................AGTGCGCTGGTCAAGACGTCG---------------------AA-----GTG..........................................................................................................2611.0010010000
............................................................................GGTCAAGACGTCG---------------------AA-----GTGCAGC--TAAAGAG.............................................................................................2911.0010000001
...................................................................AAGTGCGCTGGTCAAGACGTCG---------------------AA-----G............................................................................................................2511.0010010000
.....................................................................GTGCGCTGGTCAAGACGTC..........................................................................................................................................1911.0010010000
...............................................................................CAAGACGTCG---------------------AA-----GTGCAGC--TAAAGA..............................................................................................2511.0010000010
......................................................AGATGTTCTTTGAAAGTGC.........................................................................................................................................................1911.0010000001
............................................................................GGTCAAGACGTCG---------------------AA-----GTGCAGC--....................................................................................................2211.0010000001
............................................................................GGTCAAGACGTCG---------------------AA-----GTGC.........................................................................................................1911.0010000010
...................................................................AAGTGCGCTGGTCAAGACGT...........................................................................................................................................2011.0010010000
......................................................AGATGTTCTTTGAAAGTG..........................................................................................................................................................1811.0010000010
............................................................................GGTCAAGACGTCG---------------------AA-----GTGCA........................................................................................................2011.0010000010
...............................................................................................................................AAAGAGAAAAATCTAG-CCA-AT-T..........................................................................2211.0010010000
................................................................................AAGACGTCG---------------------AA-----GTGCAGC--TAAAG...............................................................................................2311.0010010000
....................................................................AGTGCGCTGGTCAAGACGTCG---------------------AA-----GTGC.........................................................................................................2711.0010000001
.......................................................................................................................................................TACAA-GTACAAG-------TAAAAGT................................................1911.0010010000
.....................................................................GTGCGCTGGTCAAGACGTCG---------------------....................................................................................................................2011.0010010000
......................................................................................................................................AAAATCTAG-CCA-AT-TACAA-.....................................................................1911.0010000010
.........................................................................GCTGGTCAAGACGTCG---------------------AA-----GT...........................................................................................................2011.0010010000
...........................................................................................................................................CTAG-CCA-AT-TACAA-GTACAAG-------T......................................................2211.0010010000
.............................................................................................................................................AG-CCA-AT-TACAA-GTACAAG-------T......................................................2011.0010010000
droEug1
CGTCACCGGCTT-TTTTGCTTTTTAGCTGGCGCATCGACTGAA-A-TCATTTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGACGTGAGAAAAGC--AACC--GTAGCT-AG-----TGCAGCT--AA-AAGAAAAATCTAGC-CAA-TT-------TACAAGT-------AAAAGTGCC---------AACCAGTTTAC--------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CGTCACCGGCTT-TTTTGCTTTTTAGCTGGCGCATCGACTGAA-A-ACGCCTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGACGTGAGAAAATCGTATCC--CAAGCG-AG-----TGCAGCG--AA-GAGAAAAATCTAGC-CAA-TT-------CACAAGT-------AAAAGTGTT---------AACCAGTTTACC--------------CCCA--GT---SizeHit CountTotal NormTotal
No Reads
droTak1
CGTCACCGGCTT-TTTTGCTTTTTAGCTGGCGCATCGACTGAA-A-ACGTTTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGACGTGAGAAAATT--AGCC--GAAGCG-AG-----TGCAGCT--AA-GAGAAAAATCTAGC-CAA-TT-------CACCAGT-------AAAAGTGTT---------AACCAGTTTAC--------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CGTGACCGGCTT-TTTTGCTTTTTAGCTGGCGCATCGACTGAA-A-ACGCTTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGACGTGAGAAAAAT--ATCC--GAAGCG-AG-----TGCAGCG--AA-AAGAAAAATCTAGC-CAA-TT-------CACAAGT-------AAAAGTGTT---------AACCAGCTTACC------------AA--CA--GT-GCSizeHit CountTotal NormTotal
No Reads
droRho1
CGTCACCGGCTT-TTTTGCTTTTTAGCTGGCGCATCGACTGAA-A-ACTTTTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGACGTGAAACAAATTCAGCC--AAAGCG-AG-----TGCAGCT--AA-GAGAAAAATCTAGC-CAA-TT-------CACAAGT-------AAAAGTGTT---------AACCAGTTTACC------AT--------CA--GT-GCSizeHit CountTotal NormTotal
No Reads
droFic1
CGTCACCGGCTT-TTTTGCTTTTTAGCTGGCGCATCGACTGAA-A-TCGTTTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGACGTGAAAAAAAC---------AAGCA-AG-----TGCAGCT--AA-AAGAAAAATCTTGC-CAA-TT-------TACAAGT-------AAAAGTGTT---------AACCAGTTTACC--------------------GTT-GSizeHit CountTotal NormTotal
No Reads
droKik1
CGTCACCGGCTT-TTTTGCTTTTTAGCTGGCGCATCGACCGAG-C-TCGCCTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGACGTAAAACA-------------AAAA-AG-----TGCAGCT--AA-AAGAAAAATCTA---------------------GT-------AAAAGTGCT---------AAAGAGTTAAAA------AA----------------ASizeHit CountTotal NormTotal
No Reads
droAna3
C-----CGGCTT-TTTTGCTTTTTAGCTGGCGCATCGGCGTTA-G-CGGGCTCAGATGTTCTTTGGAAGTGCGCTGGCCAAGACGT-------------------------G-----TGCAGCG--AA-AAGAAAGATCTGCT-TTT-GTTAAAAGTTAAAAGTTTGAAAGAAAAGTGTC---------AA-----------------------------------SizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
............................................................................GGCCAAGACG-------------------------T-----GTGCAGC--GA-AAAGA............................................................................................2518.008400013
............................................................................GGCCAAGACG-------------------------T-----GTGCAGC--GA-AAAG.............................................................................................2414.004200020
.....................................................................................G-------------------------T-----GTGCAGC--GA-AAAGAAAGAT.......................................................................................2113.003120000
................................................................................AAGACG-------------------------T-----GTGCAGC--GA-AAAGA............................................................................................2112.002000020
..........................................................................................................................GC--GA-AAAGAAAGATCTGC-..................................................................................1812.002020000
............................................................................GGCCAAGACG-------------------------T-----GTGCAGC--GA-AA...............................................................................................2212.002100001
............................................................................GGCCAAGACG-------------------------T-----GTGCAGC--G...................................................................................................1912.002100001
....................................................................AGTGCGCTGGCCAAGACG-------------------------T-----GTGCA........................................................................................................2412.002000020
..................................................................................................................................................................AGTTTGAAAGAAAAGTGT---------CA-----------------------------------2111.001010000
................................................................................................................................................................AAAGTTTGAAAGAAAAGTGT---------.....................................2011.001100000
.....................................................................................G-------------------------T-----GTGCAGC--GA-AAAGAAAGATCTGC-..................................................................................2511.001010000
......................................................AGATGTTCTTTGGAAGTGC.........................................................................................................................................................1911.001010000
....................................................................AGTGCGCTGGCCAAGACG-------------------------T-----GTGCAGC--....................................................................................................2611.001000001
..........................................................GTTCTTTGGAAGTGCGCTGGCC..................................................................................................................................................2211.001000001
......................................................AGATGTTCTTTGGAAGTGCGCT......................................................................................................................................................2211.001100000
.........................................................................................................................AGC--GA-AAAGAAAGATCTGC-TTT-T.............................................................................2311.001100000
......................................................AGATGTTCTTTGGAAGTGCGCTGGCC..................................................................................................................................................2611.001010000
............................................................................GGCCAAGACG-------------------------T-----GTGCAGC--GA-AAAGAAA..........................................................................................2711.001010000
.............................................................................................................................................................TTAAAAGTTTGAAAGAAAAGT................................................2111.001100000
......................................................AGATGTTCTTTGGAAGTG..........................................................................................................................................................1811.001010000
.................................................................................AGACG-------------------------T-----GTGCAGC--GA-AAAG.............................................................................................1911.001000100
....................................................................................................................................GAAAGATCTGC-TTT-TGTTAAAAGT....................................................................2411.001000010
............................................................................................................................................................GTTAAAAGTTTGAAAGAAAAGTGT---------.....................................2411.001100000
...........................................................................TGGCCAAGACG-------------------------T-----GTGCAGC--GA-A................................................................................................2211.001000010
......................................................AGATGTTCTTTGGAAGTGCGCTGG....................................................................................................................................................2411.001010000
..........................................................................................................................GC--GA-AAAGAAAGATCTGC-TTT-T.............................................................................2211.001000010
...............................................................................CAAGACG-------------------------T-----GTGCAGC--GA-AAA..............................................................................................2011.001100000
...............................................................................................................................................................AAAAGTTTGAAAGAAAAGTGT---------.....................................2111.001100000
.......................................................................GCGCTGGCCAAGACG-------------------------T-----GTGCAGC--....................................................................................................2311.001010000
.....................................................................................................................GTGCAGC--GA-AAAGAAAGATCT.....................................................................................2111.001100000
.......................................................................................................................GCAGC--GA-AAAGAAAGATCT.....................................................................................1911.001000001
.....................................................................................G-------------------------T-----GTGCAGC--GA-AAAGAAAGATCTG....................................................................................2411.001010000
.............................................................................GCCAAGACG-------------------------T-----GTGCAGC--GA-AAAGA............................................................................................2411.001000010
..........................................................................................................................GC--GA-AAAGAAAGATCTGC-TT................................................................................2011.001100000
.............................................................................GCCAAGACG-------------------------T-----GTGCAGC--G...................................................................................................1811.001000010
.....................................................................................................................GTGCAGC--GA-AAAGAAAGATCTG....................................................................................2211.001000010
.........................................................................GCTGGCCAAGACG-------------------------T-----GTGCAG.......................................................................................................2011.001010000
......................................................AGATGTTCTTTGGAAGTGCGC.......................................................................................................................................................2111.001100000
.....................................................................................G-------------------------T-----GTGCAGC--GA-AAAGAAAGATC......................................................................................2211.001100000
.......................................................................GCGCTGGCCAAGACG-------------------------T-----GTG..........................................................................................................1911.001001000
..................................................................................................................................................................AGTTTGAAAGAAAAGTGT---------C....................................1911.001100000
....................................................................AGTGCGCTGGCCAAGACG-------------------------...................................................................................................................1811.001010000
droBip1
GCTCGCCGGCTT-TTTTGCTTTTTAGCTGGCGCATCGGCGTTA-G-CGGGCTCAGATGTTCTTTGGAAGTGCGCTGGTCAAGACGT-------------------------G-----TGCAGCG--AA-AAGAAAAATCTACTTCAA-GT-------CTCAAGCT--AAAGAAAAGTGCT---------AACTAAAGTGCC------ATTCAAAA----------TSizeHit CountTotal NormTotal
No Reads
dp5
C-----CGGCCTGTTTTGCTT-TTAGCTGCCGCTCCGGCGCAT-TTACGACTGAGTTGTTCTTTGGAAGTGCGCTGGTCAAGACGCGAAA--A-----TCT--GAAACAAAG-----TGCATCA--AA-GAGAAAGATCCGTC-TAAAAA-------TATTAGT-------AAAAGTGTTAAAAGAAAG----TGCTAGCAGTACTAATTGACAAAATTGTGCTACSizeHit CountTotal NormTotalV112
Male-body		V043
Embryo		V051
Head		M022
Male-body		M040
Female-body		M059
Embryo		M062
Head
....................................................GAGTTGTTCTTTGGAAGTG...........................................................................................................................................................1912.0021000100
...................................................................AGTGCGCTGGTCAAGACG.............................................................................................................................................1811.0010000100
...........................................................TCTTTGGAAGTGCGCTGGTCAAGAC..............................................................................................................................................2511.0010000100
.........................................................................CTGGTCAAGACGCGAAA--A-----TCT--...........................................................................................................................2111.0010001000
...............................................................................................................................................................................GTGTTAAAAGAAAG----TGCTAGCAGTA......................2511.0011000000
.................................................................................................................................................................................GTTAAAAGAAAG----TGCTAGCAGTA......................2311.0010000100
..................................................................AAGTGCGCTGGTCAAGAC..............................................................................................................................................1811.0010000001
...............................................................................AAGACGCGAAA--A-----TCT--GAAACAA....................................................................................................................2211.0010000100
.....................................................................................................................................................................................AAAGAAAG----TGCTAGCAGTAC.....................2011.0010000100
...............................................................................AAGACGCGAAA--A-----TCT--GAAACAAAG-----TGCA.........................................................................................................2811.0010000100
......................................................GTTGTTCTTTGGAAGTGCGCTGGT....................................................................................................................................................2411.0010000100
........................................................................GCTGGTCAAGACGCGAAA--A-----TCT--GAAAC......................................................................................................................2711.0010000100
........................................................................GCTGGTCAAGACGCGAAA--A-----TCT--G..........................................................................................................................2311.0010000100
....................................................................................................................................AAAGATCCGTC-TAAAAA-------TATTAGT-------AAA....................................................2711.0010000100
.................................................................................GACGCGAAA--A-----TCT--GAAACAAAG-----TGC..........................................................................................................2511.0010000100
......................................................GTTGTTCTTTGGAAGTGCGCTG......................................................................................................................................................2211.0010000100
........................................................................................................AAACAAAG-----TGCATCA--AA-GA...............................................................................................1911.0010000100
....................................................GAGTTGTTCTTTGGAAGTGC..........................................................................................................................................................2011.0011000000
...................................................................AGTGCGCTGGTCAAGACGCGAAA--A-----TCT--...........................................................................................................................2711.0010000100
..................................................................................................................................AGAAAGATCCGTC-TAAAAA-------T....................................................................2011.0010100000
droPer2
C-----CGGCCTGTTTTGCTT-TTAGCTGCCGCTCCGGCGCAT-TTACGACTGAGTTGTTCTTTGGAAGTGCGCTGGTCAAGACGCGAAA--A-----TCT--GAAACAAAG-----TGCAGCA--AA-GAGAAAGATCCGTC-TAAAAA-------TATTAGT-------AAAAGTGTTAAAAGAAAG----TGTTAGCAGTACTAATTTACAAAATTGTGCTACSizeHit CountTotal NormTotalV111
Male-body		V042
Embryo		V050
Head		V057
Head		M021
Embryo		M042
Female-body
.....................................................................................CGAAA--A-----TCT--GAAACAAAG-----TGC..........................................................................................................2113.003000030
.........................................................................................................AACAAAG-----TGCAGCA--AA-GAGA.............................................................................................2013.003300000
.........................................................................CTGGTCAAGACGCGAAA--A-----TCT--G..........................................................................................................................2211.001010000
............................................................................................................AAAG-----TGCAGCA--AA-GAGAAAG..........................................................................................2011.001100000
..................................................................................................................................................................GT-------AAAAGTGTTAAAAGAAAG----TGT..............................2311.001100000
....................................................GAGTTGTTCTTTGGAAGTG...........................................................................................................................................................1911.001000010
..................................................................AAGTGCGCTGGTCAAGAC..............................................................................................................................................1811.001010000
...................................................................AGTGCGCTGGTCAAGACGC............................................................................................................................................1911.001000001
.............................................................TTTGGAAGTGCGCTGGTCAAGACGC............................................................................................................................................2511.001000010
..............................................................................................................................................................ATTAGT-------AAAAGTGTTAAAAGAA.......................................2211.001100000
............................................................................................................AAAG-----TGCAGCA--AA-GAGAAA...........................................................................................1911.001100000
.....................................................AGTTGTTCTTTGGAAGTGC..........................................................................................................................................................1911.001100000
..............................................................TTGGAAGTGCGCTGGTCAAGAC..............................................................................................................................................2211.001100000
....................................................GAGTTGTTCTTTGGAAGTGCGCT.......................................................................................................................................................2311.001000100
....................................................................GTGCGCTGGTCAAGACGC............................................................................................................................................1811.001000100
droGri2
CGCTGCCGGTTTATTTTGCTTTTTAGAGCGTACATCGTGTGGAAA-AAATGTTAGTTGTTCTTTGGAAGTGCGCTCGAGAAGTC---CAA--C-----GTT--GGAGCGAGTTGCTCTGCAAATAGAA-AAGAAAAATCTG----------------------A-------GAAAGTGTTAAAAAGAAC----T-TAAGCAAACAAAGTGAATAAGCTTACAACATSizeHit CountTotal NormTotalV109
Male-body		M041
Female-body
.............................................................................AGAAGTC---CAA--C-----GTT--GGAGCGAGTTG................................................................................................................2514.00431
.................................................................GAAGTGCGCTCGAGAAGTC---CA.........................................................................................................................................2111.00110
.....................................................................................................................................................................................................AGCAAACAAAGTGAATAAGCT........2111.00110
.................................................................GAAGTGCGCTCGAGAAGTC---CAA--C-----................................................................................................................................2311.00101
................................................................................AGTC---CAA--C-----GTT--GGAGCGAG...................................................................................................................1911.00110
.....................................................................................................................................................................................AAAAGAAC----T-TAAGCAAACAAAGTG................2411.00101
.........................................................................................................................AATAGAA-AAGAAAAATCTG----------------------A-------GA.....................................................2211.00101
.......................................................TTGTTCTTTGGAAGTGCGCTCGAGA..................................................................................................................................................2511.00101

Generated: 12/06/2013 at 02:32 PM