ID:

dsi_113

 Coordinate:

2R:11454492-11454544 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-41.2 -40.6 -40.6

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AAAAGAAAGCAACACTCAAATAAACTCACAAAGAATTCCTTATCGCCAAGAGGGGGCCAATGTTCCAAGGTTCTTTCGCCTTGAGAACTTTGAGCTTCCTCTGGCAAAGGAGATTATAATGTACAAATAATGTTGCAATAACCAGTTGAATGC
***********************************((((((...((((.(((((((((((.((((((((((......)))))).)))).))).)))))))))))).))))))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body
 M025
embryo
 SRR553485
Ovary		 SRR553486
Ovary		 O002
Head
 GSM343915
embryo
 M053
Female-body		 O001
Testis
 SRR553487
Ovary		 SRR553488
Ovary
................................................................................TTGAGAACTTTGAGCTTCCTCT................................................... 22 0 1 241.00 241 158 67 12 0 1 2 0 1 0 0 0
................................................................................TTGAGAACTTTGAGCTTCCTCTG.................................................. 23 0 1 33.00 33 14 9 8 2 0 0 0 0 0 0 0
................................................................................TTGAGAACTTTGAGCTTCCTCC................................................... 22 1 1 31.00 31 22 8 1 0 0 0 0 0 0 0 0
................................................................................TTGAGAACTTTGAGCTTCCTC.................................................... 21 0 1 28.00 28 21 4 2 0 0 0 0 0 0 1 0
................................................................................TTGAGAACTTTGAGCTTCCT..................................................... 20 0 1 23.00 23 16 6 0 0 1 0 0 0 0 0 0
................................................................................TTGAGAACTTTGAGCTTCCTCTGG................................................. 24 0 1 18.00 18 5 4 4 2 1 0 1 0 0 0 1
................................................................................TTGAGAACTTTGAGCTTCCTCTT.................................................. 23 1 1 11.00 11 7 4 0 0 0 0 0 0 0 0 0
................................................................................TTGAGAACTTTGAGCTTCCTCTGGT................................................ 25 1 1 7.00 7 2 0 3 1 0 0 0 0 0 1 0
................................................................................TTGAGAACTTTGAGCTTCCTCG................................................... 22 1 1 6.00 6 4 2 0 0 0 0 0 0 0 0 0
.........................................................................TTTCGCCTTGAGAACTTTGAGCTTCCT..................................................... 27 0 1 5.00 5 0 0 5 0 0 0 0 0 0 0 0
................................................................................TTGAGAACTTTGAGCTTCCTCTGGG................................................ 25 1 1 3.00 3 0 1 2 0 0 0 0 0 0 0 0
................................................................................TTGAGAACTTTGAGCTTCCTCTGGA................................................ 25 1 1 3.00 3 0 2 1 0 0 0 0 0 0 0 0
................................................................................TTGAGAACTTTGAGCTTCCTCTGGC................................................ 25 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0
................................................................................TTGAGAACTTTGAGCTTCCTCTGA................................................. 24 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
.................................................................................TGAGAACTTTGAGCTTCCT..................................................... 19 0 1 2.00 2 1 0 0 0 0 0 1 0 0 0 0
................................................................................TTGAGAACTTTGAGCTTCCC..................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.............................................................................GCCTTGAGAACTTTGAGCTTCC...................................................... 22 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
................................................................................TTGAGAACTTTGAGCTTCCTCTGCT................................................ 25 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
................................................................................TTGAGAACTTTGAGCTTCCTCA................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
................................................................................TTGAGAACTTTGAGCTTCCTCTGGTT............................................... 26 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................CAAGGTTCTTTCGCCTTG...................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
................................................................................TTGAGAACTTTGAGCTTCC...................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................GTGAGAACTTTGAGCTTCCTCTGG................................................. 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................TTGAGAACTTTGAGCTTCCTCTGGATT.............................................. 27 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................TCCTCTGGCAAAGGAGATTATAAT................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................CGCCTTGAGAACTTTGAGCTTCCT..................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................CTTGAGAACTTTGAGCTTCCTCT................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................TTGAGAACTTTGACCTTCCTC.................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................TTGAGAACTTTGAGCTTCCTCCG.................................................. 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................TTGAGAACTTTGAGCTTCCCCT................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................TTGAGAACTTTGAGCTTCTT..................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................TTTGAGCTTCCTCTGGCAAA............................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................TGAGAACTTTGAGCTTCCG..................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................CTTTCGCCTTGAGAACTTTGAGCTTCCT..................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................ATAACTTTGAGCTTCCTCTG.................................................. 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................TTGGGAACTTTGAGCTTCCTCTG.................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................CGCCTTGAGAACTTTGAGCTTCCTCTG.................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................TTGAGAACTTTGAGCTTCCTCTGGAA............................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................TGAGAACTTTGAGCTTCCTCTGG................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................TTGAGAACTTTGAGCTTCCTCTGAT................................................ 25 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................CCTTGAGAACTTTGAGCTTCCTCTGG................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................CGGCTTTGAGAACTTTGAGC.......................................................... 20 3 16 0.13 2 0 0 2 0 0 0 0 0 0 0 0
........................................TATGGACTAGAGGGGGCC............................................................................................... 18 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................TGAGAACTTTGAACGTC....................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GCATTCAACTGGTTATTGCAACATTATTTGTACATTATAATCTCCTTTGCCAGAGGAAGCTCAAAGTTCTCAAGGCGAAAGAACCTTGGAACATTGGCCCCCTCTTGGCGATAAGGAATTCTTTGTGAGTTTATTTGAGTGTTGCTTTCTTTT
***********************************......((((((.((((((((((((.(((.((((.((((((......)))))))))).))))))))))).))))...))))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total
................................CATTCTAATCTCCTT.......................................................................................................... 15 1 9 0.11 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 2R:11454442-11454594 + dsi_113 AAAAGAAAG------C-------------------------AAC-ACTCAA----------ATAAACTCA------CAAAGAATTCCTTATCGCCAAG---------A-GGGGGCCAATGTTC--CAAGGTTCTTTCG---------------CCTTGAGAACTTTGAGCTTCCTC-----------------------------TGGC----------------AAAGGAGATTATAA------------------T--G--TACAAATAATGTTGCAAT------AAC---------CAGTT---------GAATGC
droSec2 scaffold_1:10223628-10223779 + AAAAGAAAG------A-------------------------AAC-ACTCAA----------ATAAACTCA------CAAAGAATTCCTTATCGCCAA-----------GAGGGGCCAATGTTC--CAAGGTTCTTTCG---------------CCTTGAGAACTTTGAGCTTCCTC-----------------------------TGGC----------------AAAGGAGATTATAA------------------T--G--TACAAATAATGTTGCAAT------AAC---------CAGTT---------GGATGC
dm3 chr2R:12718754-12718908 + AAGAA--AGAAAAAAA-------------------------AAC-ACTCAA----------ATAAACTCA------CAAAGAATTCCTTATCGCCAA------------GGGGGCCAATGTTC--TAAGGTTCTTTCG---------------CCTTGAGAACTTTGAGCTTCCTC-----------------------------TGGC----------------AAAGGAGATTATAA------------------T--G--TACAAATAATGTTGCAAT------AAC---------CAGTT---------GAAACC
droEre2 scaffold_4845:13131250-13131399 - AAATGAAAG------A-------------------------AAC-ACTCGA----------ATAAACTCG------CAAGAAATTTCTTATCGCCAA------------GGGGGCCAATGTTC--CAAGGTTCTTTCG---------------C-CTGAGACCTTTGAGCTTCCTG-----------------------------TGGA----------------AAAGGAGATTATAA------------------T--G--TACAAATAATGTTGGAAT------AAC---------CAGTT---------AAACGC
droYak3 2R:16257353-16257515 - AAAAGAAAG------A-------------------------AAC-ACTCAA----------ATAAACTCG------CAAAGAATTCCTTATCGCCAA------------GGGGGCCAATGTTCGCCAAGGTTCTGTCG---------------C-CTGAGAACTTTGAGCTTCCTC-----------------------------TGGA-AT-------------AAAGGAGATTATAA------------------T--G--TACAAATAATGTTGGAAT------AAC---------CAGTTAAGCAGAATAAACCC
droEug1 scf7180000409672:2416375-2416548 - AAAATAAGA------A-------------------------AAC-ACA-AA----------ATAAACTCG------CAAAGAGTTTCTTATCGCCAA------------GGGGGCCAATGTTC--CAAGGTTTTCTTGCTA----TGCTGCGCCTTTGAGAACTTTGAGCTTCCTC-----------------------------TGGAAAG-------------AAAGGAGATTATAAA-------------AA--A------ATAAAATATATAACAAA------AAAAAACCAAACCAGTT---------AAATTT
droBia1 scf7180000301506:2134358-2134513 + GAAAAAAAA------ACGAG------------------A--AACGATTTAA----------ATAAACTCG------GAAAGAATTTCTTATCGCCCG------------GGGGGCCAATGTTC--CAAGGTTTTTGTG---------------GCCTCAGAACTTTGAGCTTCCTC-----------------------------TGGA----------------AAAGGAGATTATAAA-------------ACCAT--G--TGTAAAGCAT------AG------AAC---------CAGTT---------GGAGAA
droTak1 scf7180000415389:230381-230521 + AAAAAAAAA------C-------------------------G-A-ATTTAA----------ATAAACTTG------CAAAGAATTTCTTATCGCCAA-------------GGGGCCAATGTTC--CAAGGTTTTTT-G---------------C-CTGAGAACTTTGAGCTTCCTC-----------------------------TGGA----------------AAAGGAGATTATAAA-------------AT--A--TTATA-----------AAAAT------AAC---------CAGTT---------AAACAA
droEle1 scf7180000491214:1653010-1653146 - AAAAA----------A-------------------------AAC-ATGTAA----------ATCAACTCG------CAACGAATTTCTTATCGCCAA-------------GGGGCCAATGTTC--CAAGGTTTTCT-------------------TTTGGAACTTTGAGCTTCCTC-----------------------------TGCA----------------AGTGGAGATTATAAA-------------AC--T--G--TAAAAATAAGGA----A-------AAC---------C---T---------ATACAA
droRho1 scf7180000780084:626337-626474 - AAACAAA--------A-------------------------AAC-ATTTAA----------ATAAAATCG------CAAAGAATTTCTTATCGCCAA-------------GGGGCCAATGTTC--CAAGGTTTTCT-------------------TTGAGGACTTTGAGCTTCCTC-----------------------------TGGA----------------AATGGAGATTATAAA-------------ACT-T--G--TAAAA-----------AC------AAC---------CAACC---------AAACCA
droFic1 scf7180000453851:951342-951487 + CAAGAAA--------A-------------------------ACC-ATTTAA----------ATAAACTCG------CGAAGAATTTCTTATCGCCAA-------------GGGGCCAATGTTC--CAAGGTTTCTTTG---------------C-CTGAGAACTTTGAGCTTCCTC-----------------------------TGGA----------------GGAGGAGATTATAAA-------------ACT-C--T--TACAAACTA----CC---------AAC-----CAACCAACC---------A--ACC
droKik1 scf7180000302470:1132051-1132200 + AACAAGA-GCGTAAAA-------------------------AGC-ATTAAA----------ATAAACTCGAATAAACAGAGTCTTTCTTATCGCCAG-----------AAGGGGCCAATGTTC--C-----------------------------TTAGGAACTTTGAGCTTTCAT-----------------------------TA------------------AGAAGAGATTATAAA-------------AG--A--T--TATAAATTATGTAA-AGTAAT---AA-----------AAAT---------GACTGC
droAna3 scaffold_13266:13876762-13876965 - AATAAAA-------------------TAAAAGAAATAAAAAAGC---TTTAAAAAAACTAAATAAACTTG------GAAGAAATTCCTTATCGGGCCTTTGGGCCAC-GGGGGGCCAATGTTC--CAAGGTTTTCTCGAAAAAAATAAAAC-AC-TTTGGTACTTTGAGCTCCCAT-----------------------------TAAAA--AAAAAATTATAAAAAAAAAGATTATAA-------------TAAAACGAT--TAAAAAGT--------A-------------------AAATT---------AAATTT
droBip1 scf7180000396759:2259353-2259528 + AAAAAAAAA------TCAAAATAAAATAAAAGAAATAAAAAAGC--TTTA-------------AAACTCG------GAAGAAATTCCTTATCGGA--------------GGGGGCCAATGTTC--CAAGGTTTTCTCGAAAAA---------AC-TTTGATACTTTGAGCTCCCAT-----------------------------TAAA----------------AAAATACGATTTAAT-------------CGC-T--T--TAAAAATT--------AAAATAAAATA---------CACTT---------GGA-GT
dp5 Unknown_singleton_1898:47672-47859 - AAAAAAA--------A-------------------------AAC-ATTCGAAGAGAATGAAATA--------------CATTACTTCTTATCGGGGAA---------C-TGGGGACAATGTTC--CAAGGTTTTCGAA---------------AACTGAGAACTTTGAGCCGGCGCACACTCGATAATAATTAACAAGAATTCTCGGC-AATAAATATGTACAT-------------AAAAGAAGAAAATACT-----------A-----------AAAAT------AAC-----AAAAGAGGG---------AAACAC
droPer2 scaffold_4:6545544-6545731 + AAAAAAT--------A-------------------------AAC-GTTCGAAGAGAATGAAATA--------------CATTTCTTCTTATCGGGGAG---------C-TGGGGACAATGTTC--CAAGGTTTTCGAA---------------AACTGAGAACTTTGAGCCGGCGCACACTCGATAATAATTAACTAGAATTCTCGGC-AATAAATATGTACAT-------------AAAAGAAGAAAATACT-----------A-----------AAAAT------AAC-----AAAAGAGGG---------AAACAC
droWil2 scf2_1100000004513:6380387-6380398 + AAACGTGAG------C-------------------------GA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
AAAAGAAAG------C-------------------------AAC-ACTCAA----------ATAAACTCA------CAAAGAATTCCTTATCGCCAAG---------A-GGGGGCCAATGTTC--CAAGGTTCTTTCG---------------CCTTGAGAACTTTGAGCTTCCTC-----------------------------TGGC----------------AAAGGAGATTATAA------------------T--G--TACAAATAATGTTGCAAT------AAC---------CAGTT---------GAATGCSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
...........................................................................................................................................................TTGAGAACTTTGAGCTTCCTC-----------------------------T.................................................................................................................221241.002410158671202101000
...........................................................................................................................................................TTGAGAACTTTGAGCTTCCTC-----------------------------TG................................................................................................................23133.00330149800020000
...........................................................................................................................................................TTGAGAACTTTGAGCTTCCTC-----------------------------..................................................................................................................21128.00280214200000100
...........................................................................................................................................................TTGAGAACTTTGAGCTTCCT................................................................................................................................................20123.00230166000001000
...........................................................................................................................................................TTGAGAACTTTGAGCTTCCTC-----------------------------TGG...............................................................................................................24118.0018154400021010
.....................................................................................................................................TTTCG---------------CCTTGAGAACTTTGAGCTTCCT................................................................................................................................................2715.005000500000000
...........................................................................................................................................................TTGAGAACTTTGAGCTTCCTC-----------------------------TGGC----------------..............................................................................................2513.003020100000000
............................................................................................................................................................TGAGAACTTTGAGCTTCCT................................................................................................................................................1912.002110000000000
.........................................................................................................................................G---------------CCTTGAGAACTTTGAGCTTCC.................................................................................................................................................2212.002000200000000
.............................................................................................................................CAAGGTTCTTTCG---------------CCTTG.................................................................................................................................................................1811.001000010000000
...........................................................................................................................................................TTGAGAACTTTGAGCTTCC.................................................................................................................................................1911.001000100000000
...........................................................................................................................................................................TCCTC-----------------------------TGGC----------------AAAGGAGATTATAA------------------T--...........................................................2411.001010000000000
........................................................................................................................................CG---------------CCTTGAGAACTTTGAGCTTCCT................................................................................................................................................2411.001001000000000
..........................................................................................................................................................CTTGAGAACTTTGAGCTTCCTC-----------------------------T.................................................................................................................2311.001000100000000
...................................................................................................................................................................TTTGAGCTTCCTC-----------------------------TGGC----------------AAA...........................................................................................2011.001000100000000
....................................................................................................................................CTTTCG---------------CCTTGAGAACTTTGAGCTTCCT................................................................................................................................................2811.001010000000000
........................................................................................................................................CG---------------CCTTGAGAACTTTGAGCTTCCTC-----------------------------TG................................................................................................................2711.001001000000000
............................................................................................................................................................TGAGAACTTTGAGCTTCCTC-----------------------------TGG...............................................................................................................2311.001010000000000
.........................................................................................................................................................CCTTGAGAACTTTGAGCTTCCTC-----------------------------TGG...............................................................................................................2611.001001000000000
droSec2
AAAAGAAAG------A-------------------------AAC-ACTCAA----------ATAAACTCA------CAAAGAATTCCTTATCGCCAA-----------GAGGGGCCAATGTTC--CAAGGTTCTTTCG---------------CCTTGAGAACTTTGAGCTTCCTC-----------------------------TGGC----------------AAAGGAGATTATAA------------------T--G--TACAAATAATGTTGCAAT------AAC---------CAGTT---------GGATGCSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
..................................................................................ATTCCTTATCGCCAA-----------GAGGGGCCA..........................................................................................................................................................................................................2411.0010100
...............................................................................................AA-----------GAGGGGCCAATGTTC--CAAGG.............................................................................................................................................................................................2211.0010010
....................................................................................................................................................................TTGAGCTTCCTC-----------------------------TGGC----------------AAAGG.........................................................................................2111.0011000
..............................................................................................CAA-----------GAGGGGCCAATGTTC--CAAG..............................................................................................................................................................................................2211.0010100
droEre2
AAATGAAAG------A-------------------------AAC-ACTCGA----------ATAAACTCG------CAAGAAATTTCTTATCGCCAA------------GGGGGCCAATGTTC--CAAGGTTCTTTCG---------------C-CTGAGACCTTTGAGCTTCCTG-----------------------------TGGA----------------AAAGGAGATTATAA------------------T--G--TACAAATAATGTTGGAAT------AAC---------CAGTT---------AAACGCSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
....................................................................................................................................................................TTGAGCTTCCTG-----------------------------TGGA----------------AAAG..........................................................................................2011.001000100
.............................................................................................................................................................GAGACCTTTGAGCTTCCTG-----------------------------TGG...............................................................................................................2211.001000010
droYak3
AAAAGAAAG------A-------------------------AAC-ACTCAA----------ATAAACTCG------CAAAGAATTCCTTATCGCCAA------------GGGGGCCAATGTTCGCCAAGGTTCTGTCG---------------C-CTGAGAACTTTGAGCTTCCTC-----------------------------TGGA-AT-------------AAAGGAGATTATAA------------------T--G--TACAAATAATGTTGGAAT------AAC---------CAGTTAAGCAGAATAAACCCSizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
No Reads
droEug1
AAAATAAGA------A-------------------------AAC-ACA-AA----------ATAAACTCG------CAAAGAGTTTCTTATCGCCAA------------GGGGGCCAATGTTC--CAAGGTTTTCTTGCTA----TGCTGCGCCTTTGAGAACTTTGAGCTTCCTC-----------------------------TGGAAAG-------------AAAGGAGATTATAAA-------------AA--A------ATAAAATATATAACAAA------AAAAAACCAAACCAGTT---------AAATTTSizeHit CountTotal NormTotal
No Reads
droBia1
GAAAAAAAA------ACGAG------------------A--AACGATTTAA----------ATAAACTCG------GAAAGAATTTCTTATCGCCCG------------GGGGGCCAATGTTC--CAAGGTTTTTGTG---------------GCCTCAGAACTTTGAGCTTCCTC-----------------------------TGGA----------------AAAGGAGATTATAAA-------------ACCAT--G--TGTAAAGCAT------AG------AAC---------CAGTT---------GGAGAASizeHit CountTotal NormTotal
No Reads
droTak1
AAAAAAAAA------C-------------------------G-A-ATTTAA----------ATAAACTTG------CAAAGAATTTCTTATCGCCAA-------------GGGGCCAATGTTC--CAAGGTTTTTT-G---------------C-CTGAGAACTTTGAGCTTCCTC-----------------------------TGGA----------------AAAGGAGATTATAAA-------------AT--A--TTATA-----------AAAAT------AAC---------CAGTT---------AAACAASizeHit CountTotal NormTotal
No Reads
droEle1
AAAAA----------A-------------------------AAC-ATGTAA----------ATCAACTCG------CAACGAATTTCTTATCGCCAA-------------GGGGCCAATGTTC--CAAGGTTTTCT-------------------TTTGGAACTTTGAGCTTCCTC-----------------------------TGCA----------------AGTGGAGATTATAAA-------------AC--T--G--TAAAAATAAGGA----A-------AAC---------C---T---------ATACAASizeHit CountTotal NormTotal
No Reads
droRho1
AAACAAA--------A-------------------------AAC-ATTTAA----------ATAAAATCG------CAAAGAATTTCTTATCGCCAA-------------GGGGCCAATGTTC--CAAGGTTTTCT-------------------TTGAGGACTTTGAGCTTCCTC-----------------------------TGGA----------------AATGGAGATTATAAA-------------ACT-T--G--TAAAA-----------AC------AAC---------CAACC---------AAACCASizeHit CountTotal NormTotal
No Reads
droFic1
CAAGAAA--------A-------------------------ACC-ATTTAA----------ATAAACTCG------CGAAGAATTTCTTATCGCCAA-------------GGGGCCAATGTTC--CAAGGTTTCTTTG---------------C-CTGAGAACTTTGAGCTTCCTC-----------------------------TGGA----------------GGAGGAGATTATAAA-------------ACT-C--T--TACAAACTA----CC---------AAC-----CAACCAACC---------A--ACCSizeHit CountTotal NormTotal
No Reads
droKik1
AACAAGA-GCGTAAAA-------------------------AGC-ATTAAA----------ATAAACTCGAATAAACAGAGTCTTTCTTATCGCCAG-----------AAGGGGCCAATGTTC--C-----------------------------TTAGGAACTTTGAGCTTTCAT-----------------------------TA------------------AGAAGAGATTATAAA-------------AG--A--T--TATAAATTATGTAA-AGTAAT---AA-----------AAAT---------GACTGCSizeHit CountTotal NormTotal
No Reads
droAna3
AATAAAA-------------------TAAAAGAAATAAAAAAGC---TTTAAAAAAACTAAATAAACTTG------GAAGAAATTCCTTATCGGGCCTTTGGGCCAC-GGGGGGCCAATGTTC--CAAGGTTTTCTCGAAAAAAATAAAAC-AC-TTTGGTACTTTGAGCTCCCAT-----------------------------TAAAA--AAAAAATTATAAAAAAAAAGATTATAA-------------TAAAACGAT--TAAAAAGT--------A-------------------AAATT---------AAATTTSizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
...........................................................................................................................................................TTTGGTACTTTGAGCTCCCAT-----------------------------T.................................................................................................................2214.004220000
..................................................AAAAAAACTAAATAAACT...........................................................................................................................................................................................................................................................18110.091000010
droBip1
AAAAAAAAA------TCAAAATAAAATAAAAGAAATAAAAAAGC--TTTA-------------AAACTCG------GAAGAAATTCCTTATCGGA--------------GGGGGCCAATGTTC--CAAGGTTTTCTCGAAAAA---------AC-TTTGATACTTTGAGCTCCCAT-----------------------------TAAA----------------AAAATACGATTTAAT-------------CGC-T--T--TAAAAATT--------AAAATAAAATA---------CACTT---------GGA-GTSizeHit CountTotal NormTotal
No Reads
dp5
AAAAAAA--------A-------------------------AAC-ATTCGAAGAGAATGAAATA--------------CATTACTTCTTATCGGGGAA---------C-TGGGGACAATGTTC--CAAGGTTTTCGAA---------------AACTGAGAACTTTGAGCCGGCGCACACTCGATAATAATTAACAAGAATTCTCGGC-AATAAATATGTACAT-------------AAAAGAAGAAAATACT-----------A-----------AAAAT------AAC-----AAAAGAGGG---------AAACACSizeHit CountTotal NormTotalV112
Male-body		V043
Embryo		V051
Head		M022
Male-body		M040
Female-body		M059
Embryo		M062
Head
................................................................................................................................................................AACTTTGAGCCGGCGCACACTCGAT......................................................................................................................................2511.0010000100
.....................................................................................................................ATGTTC--CAAGGTTTTCGAA---------------......................................................................................................................................................................1911.0010100000
droPer2
AAAAAAT--------A-------------------------AAC-GTTCGAAGAGAATGAAATA--------------CATTTCTTCTTATCGGGGAG---------C-TGGGGACAATGTTC--CAAGGTTTTCGAA---------------AACTGAGAACTTTGAGCCGGCGCACACTCGATAATAATTAACTAGAATTCTCGGC-AATAAATATGTACAT-------------AAAAGAAGAAAATACT-----------A-----------AAAAT------AAC-----AAAAGAGGG---------AAACACSizeHit CountTotal NormTotalV111
Male-body		V042
Embryo		V050
Head		V057
Head		M021
Embryo		M042
Female-body
...................................................................................................................................TTTCGAA---------------AACTGAGAACTTTGAGCC....................................................................................................................................................2519.009000090
......................................................................................................................................CGAA---------------AACTGAGAACTTTGAGCC....................................................................................................................................................2218.008000080
.............................................................................................................................................................GAGAACTTTGAGCCGGCGCACACTCGAT......................................................................................................................................2815.005000050
.........................................................................................................................................................AACTGAGAACTTTGAGCC....................................................................................................................................................1814.004000040
....................................................................................................................................TTCGAA---------------AACTGAGAACTTTGAGCC....................................................................................................................................................2412.002000020
.................................................................................................................................GTTTTCGAA---------------AACTGAGAACTTTGAGCC....................................................................................................................................................2712.002000020
.......................................................................................................................................GAA---------------AACTGAGAACTTTGAGCCGGCGC...............................................................................................................................................2612.002000020
.........................................................................................................................................A---------------AACTGAGAACTTTGAGCCGGC.................................................................................................................................................2211.001000010
.........................................................................................................................................A---------------AACTGAGAACTTTGAGCC....................................................................................................................................................1911.001000010
...........................................................................................CGGGGAG---------C-TGGGGACAAT........................................................................................................................................................................................................1811.001000010
..................................................................................TCTTCTTATCGGGGAG---------C-TGG...............................................................................................................................................................................................................2011.001000001
.........................................................................................................................................................................................AATAATTAACTAGAATTCTCGGC-..............................................................................................................2311.001000010
......................................................................................................................................CGAA---------------AACTGAGAACTTTGA.......................................................................................................................................................1911.001000010
droWil2
AAACGTGAG------C-------------------------GA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalV117
Male-body		V118
Embryo		V119
Head		M020
Head		M045
Female-body
No Reads

Generated: 12/06/2013 at 02:31 PM