ID:

dsi_108

 Coordinate:

chrX_Mrandom_244:3945-4022 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-48.7 -47.8 -47.8

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CCGTTACTCCTCGACAGCAGTTCTCCTCTTCTCGCCACGGCGGCAGCAGCAGCGGCAATAACAACAATAACAGTGCATGCCATCCAGCACTGGATGCCAGCAGTGATGTTGTTGTTGTTGAACCGGCTGCGGTAGGAGTCGCACAGGAGAAAGAGAAAGAGCCGGGGCAGAAGCCAGA
***********************************..((((....((.(((((((((((((((((((((.((.(((.((.((((((....)))))).))))).)).))))))))))))))..)).))))).))....))))************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553487
Ovary		 SRR553485
Ovary		 SRR553486
Ovary		 SRR553488
Ovary		 M025
embryo
 M023
head
 O001
Testis
 SRR618934
Ovary		 M024
male body
 O002
Head
 GSM343915
embryo
 M053
Female-body
.........................................................................................................ATGTTGTTGTTGTTGAACCGG.................................................... 21 0 1 117.00 117 44 23 12 26 1 0 0 10 0 0 1 0
.........................................................................................................ATGTTGTTGTTGTTGAACCGGC................................................... 22 0 1 106.00 106 22 24 13 7 16 15 0 5 4 0 0 0
.........................................................................................................ATGTTGTTGTTGTTGAACCGGCT.................................................. 23 0 1 38.00 38 6 0 4 4 13 8 0 2 1 0 0 0
.........................................................................................................ATGTTGTTGTTGTTGAACCGGCTGC................................................ 25 0 1 29.00 29 5 5 12 0 1 1 0 5 0 0 0 0
.........................................................................................................ATGTTGTTGTTGTTGAACCG..................................................... 20 0 1 22.00 22 7 3 1 2 1 5 1 1 1 0 0 0
..................................................AGCGGCAATAACAACAATAACA.......................................................................................................... 22 0 1 8.00 8 1 2 0 0 0 0 1 2 0 1 1 0
.........................................................................................................ATGTTGTTGTTGTTGAACC...................................................... 19 0 1 8.00 8 1 0 0 0 0 4 0 1 1 1 0 0
..............................................................................................TGCCAGCAGTGATGTTGTTGTT.............................................................. 22 0 1 8.00 8 0 0 0 0 2 0 4 0 0 1 0 1
.........................................................................................................ATGTTGTTGTTGTTGAACCGGCC.................................................. 23 1 1 4.00 4 0 0 0 0 3 0 0 0 1 0 0 0
..............................................................................................TGCCAGCAGTGATGTTGTT................................................................. 19 0 1 4.00 4 0 0 0 0 0 0 4 0 0 0 0 0
..............................................................................................TGCCAGCAGTGATGTTGT.................................................................. 18 0 1 4.00 4 0 0 0 0 0 0 4 0 0 0 0 0
........................................................................................................GATGTTGTTGTTGTTGAACCGGCT.................................................. 24 0 1 4.00 4 0 1 0 0 3 0 0 0 0 0 0 0
.........................................................................................................ATGTTGTTGTTGTTGAACCGGCTA................................................. 24 1 1 3.00 3 1 1 0 0 0 0 0 1 0 0 0 0
................................................................................................CCAGCAGTGATGTTGTTGTT.............................................................. 20 0 1 3.00 3 0 0 0 0 0 0 3 0 0 0 0 0
..........................................................TAACAACAATAACAGTGCATGCCA................................................................................................ 24 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0
.........CTCGACAGCAGTTCTCCTCTTCT.................................................................................................................................................. 23 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0
.................................................CAGCGGCAATAACAACAATAACA.......................................................................................................... 23 0 1 2.00 2 0 0 0 1 0 0 1 0 0 0 0 0
.........................................................................................................ATGTTGTTGTTGTTGAACCGGCTG................................................. 24 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
.........................................................................................................ATGTTGTTGTTGTTGAACCGGCA.................................................. 23 1 1 2.00 2 0 1 0 0 0 0 0 1 0 0 0 0
..............................................................................................TGCCAGCAGTGATGTTGTTGT............................................................... 21 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0
..............................................................................................TGCCAGCAGTGATGTTGTTGTTG............................................................. 23 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0
.........................................................................................................ATGTTGTTGTTGTTGAACCGGA................................................... 22 1 1 2.00 2 0 0 1 0 0 1 0 0 0 0 0 0
................................................................................................CCAGCAGTGATGTTGTTGTTGT............................................................ 22 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0
.........................................................................................................ATGTTGTTGTTGTTGAACCGGCTT................................................. 24 1 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0
..................................................AGCGGCAATAACAACAATA............................................................................................................. 19 0 2 1.50 3 0 0 0 0 0 0 2 0 0 0 1 0
........................................................................................................GATGTTGTTGTTGTTGAACCGGCC.................................................. 24 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................TAACAACAATAACAGTGCA..................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
..............................CTCGCCACGGCGGCAGCAGCAGCGGC.......................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
..........................................................TAACAACAATAACAGTGCATGCC................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................TTGTTGTTGTTGAACCGGCTGC................................................ 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................ATGTTGTTGTTGTTGAACCGGG................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................GTTGTTGTTGAACCGG.................................................... 16 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................ATGTTGTTGTTGTTGAACCGGT................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................AGGTTGTTGTTGTTGAACCGGCT.................................................. 23 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.........................GTCTTCTCGCCACGGTGGAAG.................................................................................................................................... 21 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................CCAGCAGTGATGTTGTTGTTG............................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................ATGTTGTTGTTGTTGAACCTGCTA................................................. 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................TAACAACAATAACAGTGC...................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................ATGTTGTTGTTGTTGAATCGGC................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................GAAAGAGCCGGGGCA......... 15 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................ATGTTGTTGTTGTTGAACCGGCTAAA............................................... 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................ATGTTGTTGTTGTTGAACCGGCAAA................................................ 25 3 3 1.00 3 3 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................ATGTTGTTGTTGTTGGACCGGC................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
..........................................................TAACAACAATAACAGTGCATG................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................................ATGTTGTCGTTGTTGAACCGGC................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................TGTTGTTGAACCGGC................................................... 15 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................CAGCGGCAATAACAACAATAAC........................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................TGCCAGCAGTGATGTTGTTG................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................GATGTTGTTGTTGTTGAACCG..................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................ATGTTGTTGTTGTTGAACCGT.................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................TGATGTTGTTGTTGTTGAACCGGCT.................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................TGATGTCGTTGTTGTTGAA........................................................ 19 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................AGCGGCAATAACAACAATAACAA......................................................................................................... 23 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................ATGTTGTTGTTGAACCGGCA.................................................. 20 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................GCCACTAGTGATTTTGTTGTT.............................................................. 21 3 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0
.................................................CAGCGGCAATAACAACAATAAAAA......................................................................................................... 24 2 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0
..................AGTTCTCCTCTTCCC................................................................................................................................................. 15 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................CAGGAGTCGCACAGG............................... 15 1 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................GCCACTAGTGATTTTGTTGT............................................................... 20 3 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................TGATGTCGTTGTTGTTGAAA....................................................... 20 2 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................AGTGATTTTGTTGTTGT............................................................ 17 1 15 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0
.............................................GCAGCAGCGGCCATATCA................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

TCTGGCTTCTGCCCCGGCTCTTTCTCTTTCTCCTGTGCGACTCCTACCGCAGCCGGTTCAACAACAACAACATCACTGCTGGCATCCAGTGCTGGATGGCATGCACTGTTATTGTTGTTATTGCCGCTGCTGCTGCCGCCGTGGCGAGAAGAGGAGAACTGCTGTCGAGGAGTAACGG
*************************************((((....((.(((((.((..((((((((((((((.((.(((((.((((((....)))))).)).))).)).))))))))))))))))))))).))....))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M053
Female-body		 SRR553485
Ovary
.........................................................................................................................................GCCGTGGCGAGAAGAGGAGAACTG................. 24 0 1 1.00 1 1 0 0
.................................TGTGCGACTCCTACCGCAGCCGGTT........................................................................................................................ 25 0 1 1.00 1 0 0 1
.....................................................................................................................................................AGAGGAGAACTGCTGTCGAGG........ 21 0 1 1.00 1 0 1 0
........................TCTTTCTCCTGTGCGACTCCC..................................................................................................................................... 21 1 1 1.00 1 1 0 0
..................................................................................CATCCATTGCTGGAGGGCTT............................................................................ 20 3 7 0.29 2 2 0 0
.......................................................................................AGTCCTGGATCGCATGCA......................................................................... 18 2 6 0.17 1 0 0 0
.................................................................................................GCCATCCACTGTTAGTGTT.............................................................. 19 3 16 0.13 2 0 0 0
......................................................................................................................TATGGCCGCTGCTGCT............................................ 16 1 20 0.10 2 0 0 0
............................................TATCGCGGCCGGTTC....................................................................................................................... 15 2 20 0.10 2 0 0 0
......................................................................................................................TATGGCCGCTGCTGAGGCCG........................................ 20 3 18 0.06 1 0 0 0
......................................................................................................................TATGGCCGCTGCTGCCACCG........................................ 20 3 20 0.05 1 0 0 0
......................................................................................................................TATGGCCGCTGCTGCTG........................................... 17 1 20 0.05 1 0 0 0
..................................................................................................................TTGATATGGCCGCTGCTG.............................................. 18 2 20 0.05 1 0 0 0
....................................................................................................................GATATTGCCGCTGCTG.............................................. 16 1 20 0.05 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 chrX_Mrandom_244:3895-4072 - dsi_108 CCGTTACTCCTCGACAGCA-------------GTTCTCCTCTTCTCGCCACGGCGGCAGCAGCAGCGGCAATAACAACAATAA---------------------CAGTGCATGCCATCCAGCACTGGATG---CCAGCA---GTGATG---TTGTTGTTGTTGAACCGGCTGCGGTAGGAGTCGCACAGGA---GAAAGAGAA---------AGAG---CCGGGGCAGAAGCCAGA
droSec2 scaffold_4:2149964-2150135 + dse_197 CCGTTACTCCTCGACAGCA-------------GTTCTCCTCTTCTCGCCACGGCGGCAGCAGCAGCGGCAATAACAACAATAA---------------------CAGTGCATGCCATCCAGCACTGGATG---CCAGCA---GTGATG---TTGTTGTTGTTGAACCGGCTGCGGTAGGAGTCGCACAGGA---GA------A---------AGAG---CCGGAGCAGAAGCCAGA
dm3 chrX:4579780-4579933 - CCGTTACT-------------------------------------CGCCACGGCGGCAGCAGCAGCGGCAATAACAACAATAA---------------------CAGTGCATGCCATCCAGCACTGGATG---CCAGCA---GTGATG---TTGTTGTTGTTGAACCGGCAGCGGTAGGAGTCGCACAGGA---GGAAGAGGA---------AGAG---CCGGAGCAAAGGCCAGA
droEre2 scaffold_4690:1957110-1957273 - CTGTTACTCCGCGACATCA-------------GTTGTCCTCTTCTCGCCACGGCGGCAGCAACAAT---AACAACAACAATAA---------------------CAGTGGGTGCCATCCAGCATTGGATG---TCAGCA---GTGGTG---TTGTTGTTGCTGCACCGGCAGCGATAGGAGGAGCACAG------GAAGAGGA---------AGAG---CCGGAGCAG--------
droYak3 X:3860422-3860596 + CCGTTACTTCGCGACAGCA-------------GTTGTCCTCTTCCCGCCACGGCGGTAGCAACAAT---------AACAATAATAACAGCAACAGCAACAACAGCAGTGGGTGCCATTCAGCATTGGATG---CCAACA---GTGGTG---TTGTTGTTGTTGCACCGGCAGCGGTAGGAGGAGCACAG------GAAGAGGA---------AGAG---CC------------AGA
droEug1 scf7180000409548:355299-355458 - CCGTTAATCCCAGACAGCA-------------GCTGTCCTCTTCTCGCCCCAACGGCAACA---------------ACAATAA---------------------CAGTGATTGTCATCCAGCACTGGATG---CCAACA---GTACTG---TTGTTGTTGTTGCACCGGCAGCGGAAAGTGAGCCTGAG------GAGGA------------AGAACCGCCTGAAGAAGATGAAAA
droBia1 scf7180000301703:117349-117538 + CCGTTAGTCCGCGACAGC-AGCAGCAACAGCAGTTGTCCTCTTCTCGCCACGGCGGCAGCAA---------CAATAACAATAA------------------CGACAGTGGGTGCCATCCAGCACTGGATG---CCAGCA---GTAGTGTTGTTGTTGTTGTTGCACCGGCAGCGGGAAGGGACGAGCA---ACTGGAAGAG------GCCGTGGAG---CTGGAAGTGGTGGTGAA
droTak1 scf7180000414746:63451-63602 - GC----------AGCAGCA-------------GTTGTCCTCTTCTCGCCACGGCGGCGGCAGCAA------CAATAACAATAA---------------------CAGTGGGTGCCATCCAGCACTGGATG---CCAGCAGCAGTAGTGTTGTTGTTGTTGTGGCGCCGGCAGCGGGAAGAG---AACAGGAACTGG------AAGGGG----AG-------------------AGG
droEle1 scf7180000491011:1727310-1727462 + CCGTTTCTCCGCGACAAC-AGC---AACAGCAGTTGTCCTCTTTTCGCCACGGCGGCAA------------CAATAACAATAA---------------------CGGTGAGTGCCATCCAGCATTGGATGGATCCGGCA---G---TG---TTGTTGTTGTTGCACCGGCAGCGGGAAAGGA---------ACTAG------AAGAGAC---AGAA---C----------------
droRho1 scf7180000778083:144963-145121 - CCGTCACTCCGCGACAAC-AGC---AACACCAGTTGTCCTCTTCTCGCCACGGCGGCAA------------CAATAACAATAA---------------------CAGTGAGTGTCATCCTGCATTGGATGGATCCAGCA---GTGTTG---TTGTTGTGGTTGCACCGGCGGCGGGAAGCGA---------ACTCGAAGGG------GC---AGAA---C-------------GGG
droFic1 scf7180000453775:107965-108123 + CCGTTACTCCACGGCAAC-AGCAGAAACAGCATTTGTCCTCTTCTCGCCACGGCAGCAA------------CAATAACAATAA---------------------CAGTGAGTGCCATCCAGCACTGGATG---CCAGCA---GT---G---TTGTTGTTATTGCACCGGCAGCGGGGAGAGG---------TC---------A---------AA---CGTCGGATCAGGATGCAT-
droBip1 scf7180000396383:83283-83399 + TTGTTAATCCACGCCAGCC------AATATC-GCCGGTATCTGCACGCCCTGGCAGCACCATCAG------------CAGCAA------------------CAGTAGTTGCTCCAGTCCAGCATTGGACT---CCAGCA---GTGTTG---TTGTTGTGGGTG-------------------------------------------------------------------------
droGri2 scaffold_15110:15667277-15667348 + CCGCCGCTCATAGGCGGTG-------------GTG-TACCTCCTCCGCCACAGCAGCAACAGCTGCAGCAACAACAACAACAA---------------------CAG---------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
CCGTTACTCCTCGACAGCA-------------GTTCTCCTCTTCTCGCCACGGCGGCAGCAGCAGCGGCAATAACAACAATAA---------------------CAGTGCATGCCATCCAGCACTGGATG---CCAGCA---GTGATG---TTGTTGTTGTTGAACCGGCTGCGGTAGGAGTCGCACAGGA---GAAAGAGAA---------AGAG---CCGGGGCAGAAGCCAGASizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
.................................................................................................................................................ATG---TTGTTGTTGTTGAACCGG...................................................................211117.0011710010002312442610
.................................................................................................................................................ATG---TTGTTGTTGTTGAACCGGC..................................................................221106.0010601541600024132275
.................................................................................................................................................ATG---TTGTTGTTGTTGAACCGGCT.................................................................23138.00380811300004642
.................................................................................................................................................ATG---TTGTTGTTGTTGAACCGGCTGC...............................................................25129.00290101000512505
.................................................................................................................................................ATG---TTGTTGTTGTTGAACCG....................................................................20122.0022051110031721
...............................................................AGCGGCAATAACAACAATAA---------------------CA..................................................................................................................................2218.008100011020102
.................................................................................................................................................ATG---TTGTTGTTGTTGAACC.....................................................................1918.008041001000101
................................................................................................................................TG---CCAGCA---GTGATG---TTGTTGTT.............................................................................2218.008000241100000
................................................................................................................................TG---CCAGCA---GTGATG---TTGTT................................................................................1914.004000040000000
................................................................................................................................TG---CCAGCA---GTGATG---TTGT.................................................................................1814.004000040000000
................................................................................................................................................GATG---TTGTTGTTGTTGAACCGGCT.................................................................2414.004000300010000
.....................................................................................................................................CCAGCA---GTGATG---TTGTTGTT.............................................................................2013.003000030000000
.......................................................................TAACAACAATAA---------------------CAGTGCATGCCA........................................................................................................................2412.002000020000000
.........CTCGACAGCA-------------GTTCTCCTCTTCT...............................................................................................................................................................................................2312.002000200000000
..............................................................CAGCGGCAATAACAACAATAA---------------------CA..................................................................................................................................2312.002000010000010
.................................................................................................................................................ATG---TTGTTGTTGTTGAACCGGCTG................................................................2412.002000000000020
................................................................................................................................TG---CCAGCA---GTGATG---TTGTTGT..............................................................................2112.002000020000000
................................................................................................................................TG---CCAGCA---GTGATG---TTGTTGTTG............................................................................2312.002000020000000
.....................................................................................................................................CCAGCA---GTGATG---TTGTTGTTGT...........................................................................2212.002000020000000
...............................................................AGCGGCAATAACAACAATA..........................................................................................................................................................1921.503100020000000
.......................................................................TAACAACAATAA---------------------CAGTGCA.............................................................................................................................1911.001000010000000
...........................................CTCGCCACGGCGGCAGCAGCAGCGGC.......................................................................................................................................................................2611.001000000100000
.......................................................................TAACAACAATAA---------------------CAGTGCATGCC.........................................................................................................................2311.001000010000000
.......................................................................................................................................................TTGTTGTTGTTGAACCGGCTGC...............................................................2211.001000100000000
.........................................................................................................................................................GTTGTTGTTGAACCGG...................................................................1611.001000000000001
.....................................................................................................................................CCAGCA---GTGATG---TTGTTGTTG............................................................................2111.001000010000000
.......................................................................TAACAACAATAA---------------------CAGTGC..............................................................................................................................1811.001000010000000
........................................................................................................................................................................................................GAA---------AGAG---CCGGGGCA.........1511.001000000000001
.......................................................................TAACAACAATAA---------------------CAGTGCATG...........................................................................................................................2111.001000001000000
...........................................................................................................................................................TGTTGTTGAACCGGC..................................................................1511.001000000010000
..............................................................CAGCGGCAATAACAACAATAA---------------------C...................................................................................................................................2211.001000000010000
................................................................................................................................TG---CCAGCA---GTGATG---TTGTTG...............................................................................2011.001000010000000
................................................................................................................................................GATG---TTGTTGTTGTTGAACCG....................................................................2111.001000100000000
...............................................................................................................................................TGATG---TTGTTGTTGTTGAACCGGCT.................................................................2511.001001000000000
droSec2
CCGTTACTCCTCGACAGCA-------------GTTCTCCTCTTCTCGCCACGGCGGCAGCAGCAGCGGCAATAACAACAATAA---------------------CAGTGCATGCCATCCAGCACTGGATG---CCAGCA---GTGATG---TTGTTGTTGTTGAACCGGCTGCGGTAGGAGTCGCACAGGA---GA------A---------AGAG---CCGGAGCAGAAGCCAGASizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
.................................................................................................................................................ATG---TTGTTGTTGTTGAACCGGC..................................................................22115.00151932
.................................................................................................................................................ATG---TTGTTGTTGTTGAACCGG...................................................................21114.00144343
.................................................................................................................................................ATG---TTGTTGTTGTTGAACCGGCTGC...............................................................25110.00102701
.................................................................................................................................................ATG---TTGTTGTTGTTGAACCGGCT.................................................................2317.0070700
.................................................................................................................................................ATG---TTGTTGTTGTTGAACCG....................................................................2013.0030201
................................................................................................................................TG---CCAGCA---GTGATG---TTGTTGT..............................................................................2112.0022000
...............................................................AGCGGCAATAACAACAATAA---------------------CA..................................................................................................................................2212.0020200
.................................................................................................................................................ATG---TTGTTGTTGTTGAACCGGCTG................................................................2412.0020200
..................................................................................................................................................TG---TTGTTGTTGTTGAACCGGCTG................................................................2311.0010100
........................................................................................................................................................................................CACAGGA---GA------A---------AGAG---CCGGAGC..........2111.0010100
................................................................................................................................TG---CCAGCA---GTGATG---TTGTTGTT.............................................................................2211.0010100
................................................................................................................................TG---CCAGCA---GTGATG---TTGTTGTTG............................................................................2311.0010100
.......................................................................................................................................................................................GCACAGGA---GA------A---------AGAG---CCGGA............2011.0010100
................................................................................................................................................GATG---TTGTTGTTGTTGAACCGGC..................................................................2311.0011000
...............................................................................................................................................................GTTGAACCGGCTGCGGTAGGAGTCG....................................................2511.0010100
droEre2
CTGTTACTCCGCGACATCA-------------GTTGTCCTCTTCTCGCCACGGCGGCAGCAACAAT---AACAACAACAATAA---------------------CAGTGGGTGCCATCCAGCATTGGATG---TCAGCA---GTGGTG---TTGTTGTTGCTGCACCGGCAGCGATAGGAGGAGCACAG------GAAGAGGA---------AGAG---CCGGAGCAG--------SizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
..................................................................................................................................................TG---TTGTTGTTGCTGCACCGGCAG................................................................2312.002100100
.................................................ACGGCGGCAGCAACAAT---AACA...................................................................................................................................................................2111.001000100
.........................................................................................................................................................GTTGTTGCTGCACCGGCAG................................................................1911.001000010
...................................................................................................................ATCCAGCATTGGATG---TCAGCA---GTGGTG---TT...................................................................................2911.001001000
........................................................................................................................................GCA---GTGGTG---TTGTTGTTG............................................................................1811.001001000
.............................................................................................................................................................................GATAGGAGGAGCACAG------GA.......................................1811.001000010
................................................CACGGCGGCAGCAACAAT---AAC....................................................................................................................................................................2111.001000100
.......................................................................................................................................................TTGTTGTTGCTGCACCGGCAG................................................................2111.001000100
..............CATCA-------------GTTGTCCTCTTCTCGCCAC.........................................................................................................................................................................................2411.001000010
............................................................................................................................TGGATG---TCAGCA---GTGGTG---TTGTT................................................................................2311.001000001
.................................................................................................................................................................TGCACCGGCAGCGATAGGAGG......................................................2111.001000010
droYak3
CCGTTACTTCGCGACAGCA-------------GTTGTCCTCTTCCCGCCACGGCGGTAGCAACAAT---------AACAATAATAACAGCAACAGCAACAACAGCAGTGGGTGCCATTCAGCATTGGATG---CCAACA---GTGGTG---TTGTTGTTGTTGCACCGGCAGCGGTAGGAGGAGCACAG------GAAGAGGA---------AGAG---CC------------AGASizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
..........................................................................................................................ATTGGATG---CCAACA---GTGGTG---TTGT.................................................................................2411.0010010000
...................................................................................................................ATTCAGCATTGGATG---CCAACA---GT............................................................................................2311.0010000010
........TCGCGACAGCA-------------GTTGTCCTCTTCCC..............................................................................................................................................................................................2511.0010000001
droEug1
CCGTTAATCCCAGACAGCA-------------GCTGTCCTCTTCTCGCCCCAACGGCAACA---------------ACAATAA---------------------CAGTGATTGTCATCCAGCACTGGATG---CCAACA---GTACTG---TTGTTGTTGTTGCACCGGCAGCGGAAAGTGAGCCTGAG------GAGGA------------AGAACCGCCTGAAGAAGATGAAAASizeHit CountTotal NormTotal
No Reads
droBia1
CCGTTAGTCCGCGACAGC-AGCAGCAACAGCAGTTGTCCTCTTCTCGCCACGGCGGCAGCAA---------CAATAACAATAA------------------CGACAGTGGGTGCCATCCAGCACTGGATG---CCAGCA---GTAGTGTTGTTGTTGTTGTTGCACCGGCAGCGGGAAGGGACGAGCA---ACTGGAAGAG------GCCGTGGAG---CTGGAAGTGGTGGTGAASizeHit CountTotal NormTotal
No Reads
droTak1
GC----------AGCAGCA-------------GTTGTCCTCTTCTCGCCACGGCGGCGGCAGCAA------CAATAACAATAA---------------------CAGTGGGTGCCATCCAGCACTGGATG---CCAGCAGCAGTAGTGTTGTTGTTGTTGTGGCGCCGGCAGCGGGAAGAG---AACAGGAACTGG------AAGGGG----AG-------------------AGGSizeHit CountTotal NormTotal
No Reads
droEle1
CCGTTTCTCCGCGACAAC-AGC---AACAGCAGTTGTCCTCTTTTCGCCACGGCGGCAA------------CAATAACAATAA---------------------CGGTGAGTGCCATCCAGCATTGGATGGATCCGGCA---G---TG---TTGTTGTTGTTGCACCGGCAGCGGGAAAGGA---------ACTAG------AAGAGAC---AGAA---C----------------SizeHit CountTotal NormTotal
No Reads
droRho1
CCGTCACTCCGCGACAAC-AGC---AACACCAGTTGTCCTCTTCTCGCCACGGCGGCAA------------CAATAACAATAA---------------------CAGTGAGTGTCATCCTGCATTGGATGGATCCAGCA---GTGTTG---TTGTTGTGGTTGCACCGGCGGCGGGAAGCGA---------ACTCGAAGGG------GC---AGAA---C-------------GGGSizeHit CountTotal NormTotal
No Reads
droFic1
CCGTTACTCCACGGCAAC-AGCAGAAACAGCATTTGTCCTCTTCTCGCCACGGCAGCAA------------CAATAACAATAA---------------------CAGTGAGTGCCATCCAGCACTGGATG---CCAGCA---GT---G---TTGTTGTTATTGCACCGGCAGCGGGGAGAGG---------TC---------A---------AA---CGTCGGATCAGGATGCAT-SizeHit CountTotal NormTotal
No Reads
droBip1
TTGTTAATCCACGCCAGCC------AATATC-GCCGGTATCTGCACGCCCTGGCAGCACCATCAG------------CAGCAA------------------CAGTAGTTGCTCCAGTCCAGCATTGGACT---CCAGCA---GTGTTG---TTGTTGTGGGTG-------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droGri2
CCGCCGCTCATAGGCGGTG-------------GTG-TACCTCCTCCGCCACAGCAGCAACAGCTGCAGCAACAACAACAACAA---------------------CAG---------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalV109
Male-body		M041
Female-body
No Reads

Generated: 12/06/2013 at 02:31 PM