ID:

dsi-mir-iab-8

 Coordinate:

3R:8791201-8791300 +

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-39.4 -38.9 -38.9

Flybase annnotation

intron [Dsim\GD20268-in]; Antisense to pre_miRNA [Dsim\mir-iab-4-RM]; Antisense to miRNA [Dsim\miR-iab-4-3p-RB]; Antisense to miRNA [Dsim\miR-iab-4-5p-RA]

No Repeatable elements found

Sense Strand Reads

TAACAAAGTGCTACGTGTATTAAAGTGTATTAAAAGTGTTTCACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCATTATCCAAAAGTGCTGAAAATTATGCCGTGTCGCGGATCTAGATGCAG
********************************************************((((((.((((((((..((((((((((((.((((.((....((......))..)))))).)))))))))))).)))))))).)))).))...**************************************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 M053
Female-body		 GSM343915
embryo
 SRR553488
Ovary		 M024
male body
 SRR553487
Ovary		 M025
embryo
 O002
Head
 SRR618934
Ovary		 SRR553486
Ovary		 SRR553485
Ovary		 M023
head
.............................................................................................................GGATACATTCAGTATACGTTTACG................................................................... 24 0 1 196.00 196 194 0 0 0 0 0 0 2 0 0 0 0
............................................................................................................AGGATACATTCAGTATACGTTTACG................................................................... 25 0 1 142.00 142 142 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................AGGATACATTCAGTATACGTTT...................................................................... 22 0 1 109.00 109 107 1 0 0 0 0 0 1 0 0 0 0
.......................................................................TTACGTATACTGAAGGTA............................................................................................................... 18 0 1 106.00 106 99 0 0 0 0 0 0 6 0 1 0 0
.......................................................................TTACGTATACTGAAGGTATACCGG......................................................................................................... 24 0 1 105.00 105 26 10 3 39 0 22 0 1 3 0 1 0
.......................................................................TTACGTATACTGAAGGTAT.............................................................................................................. 19 0 1 105.00 105 61 3 3 1 24 1 1 0 2 5 3 1
.......................................................................TTACGTATACTGAAGGTATA............................................................................................................. 20 0 1 103.00 103 84 8 5 0 2 0 2 2 0 0 0 0
.......................................................................TTACGTATACTGAAGGTATACC........................................................................................................... 22 0 1 73.00 73 4 24 27 2 7 4 5 0 0 0 0 0
.......................................................................TTACGTATACTGAAGGTATAC............................................................................................................ 21 0 1 48.00 48 5 30 6 1 4 0 0 0 1 0 1 0
............................................................................................................AGGATACATTCAGTATAC.......................................................................... 18 0 1 38.00 38 38 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................AGGATACATTCAGTATACG......................................................................... 19 0 1 34.00 34 33 0 0 0 0 0 0 1 0 0 0 0
.......................................................................TTACGTATACTGAAGGTATACCGGA........................................................................................................ 25 0 1 26.00 26 6 1 4 5 2 2 5 0 1 0 0 0
............................................................................................................AGGATACATTCAGTATACGT........................................................................ 20 0 1 20.00 20 20 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GGATACATTCAGTATACGTTT...................................................................... 21 0 1 19.00 19 18 0 0 0 0 0 0 1 0 0 0 0
.......................................................................TTACGTATACTGAAGGTATACCG.......................................................................................................... 23 0 1 18.00 18 14 1 0 0 0 0 2 0 1 0 0 0
.............................................................................................................GGATACATTCAGTATACG......................................................................... 18 0 1 15.00 15 15 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GGATACATTCAGTATACGT........................................................................ 19 0 1 11.00 11 11 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GGATACATTCAGTATACGTT....................................................................... 20 0 1 11.00 11 11 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................AGGATACATTCAGTATACGTT....................................................................... 21 0 1 9.00 9 9 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TTACGTATACTGAAGGTATACCGGT........................................................................................................ 25 1 1 8.00 8 0 0 0 2 1 2 0 0 1 0 2 0
........................................................................TACGTATACTGAAGGTAT.............................................................................................................. 18 0 1 8.00 8 6 1 0 0 0 0 0 1 0 0 0 0
.............................................................................................................GGATACATTCAGTATACGTTTA..................................................................... 22 0 1 7.00 7 5 0 2 0 0 0 0 0 0 0 0 0
........................................................................TACGTATACTGAAGGTATACCGG......................................................................................................... 23 0 1 7.00 7 4 1 0 1 0 0 0 0 1 0 0 0
........................................................................TACGTATACTGAAGGTATACCG.......................................................................................................... 22 0 1 6.00 6 4 2 0 0 0 0 0 0 0 0 0 0
....................................................TTGCTCGTGCTATCTCGTG................................................................................................................................. 19 0 1 6.00 6 0 0 2 0 0 0 3 0 1 0 0 0
........................................................................TACGTATACTGAAGGTATACCGGA........................................................................................................ 24 0 1 5.00 5 2 0 0 1 1 0 0 0 0 1 0 0
.............................................................................................................GGATACATTCAGTATACGTTTAC.................................................................... 23 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TTACGTATACTGAAGGTATACCGT......................................................................................................... 24 1 1 3.00 3 0 1 0 0 0 0 0 0 2 0 0 0
........................................................................TACGTATACTGAAGGTATACC........................................................................................................... 21 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0
..............................................................................................................GATACATTCAGTATACGTTTAA.................................................................... 22 1 1 3.00 3 0 1 0 2 0 0 0 0 0 0 0 0
...................................................GTTGCTCGTGCTATCTCGTG................................................................................................................................. 20 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0
........................................................................TACGTATACTGAAGGTATAC............................................................................................................ 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TTACGTATACTGAAGGTATACCGGAT....................................................................................................... 26 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................................TTACGTATACTGAAGGTATACCGGG........................................................................................................ 25 1 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0
.......................................................................TTACGTATACTGAAGGGATACCGG......................................................................................................... 24 1 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0
........................................................................TACGTATACTGAAGGTATA............................................................................................................. 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TTACGTATACTGAAGGTATACCA.......................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................TTACGTATACTGAATGTATA............................................................................................................. 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................TTACGTATACTGAAGGGATACCGGA........................................................................................................ 25 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................TTACGTATACTGAAGGTATACCGGC........................................................................................................ 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................TTAAGTATACTGAAGGTATACC........................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................TTACGTATACTGGAGGTATACC........................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................GATACATTCAGTATACGTTTA..................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TTACGTATACTGAGGGTAT.............................................................................................................. 19 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................TTACGTATACTTAAGGTATACCGG......................................................................................................... 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................GATAGGATACACTCAGGATACATTCA................................................................................ 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................CATTCAGTATACGTTTACG................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................GTTACGTATACTGAAGGTATACCGGA........................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................TTACGTATACTGAAGGTATAAC........................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................CTTACGTATACTGAAGGTAT.............................................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................TTACGTATACTGAAGGTATT............................................................................................................. 20 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................TTACGTATACTGAAGGTATACT........................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................TACGTATACTGAAGGTATACCGGAT....................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................TAGGATACACTCAGGATACATTCAGT.............................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................TTACGTATACTAAAGGTATAC............................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................ATACTGAAGGTATACCGG......................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................TTACGTATACTGAAGGT................................................................................................................ 17 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
...............................................................................................................ATACATTCAGTATACGTTTAT.................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................TTACGTATACTGAAGGGATTCC........................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................CGTTGCTCGTGCTATCTCGTG................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................TTACGTATACTGAAGGTATAA............................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................AGGATACATTCAGTATACGTTTAC.................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TTACGTATACTGAAGGGATAC............................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................TTACGTATACTGAAGGTAC.............................................................................................................. 19 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................GATACATTCAGTATACGT........................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................AGGATACATTCAGTATACGTTTA..................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................TTACGTACACCGAAGGTATACCA.......................................................................................................... 23 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................TTACGTATACTGACGGTCTA............................................................................................................. 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................TTACGTATACTGAAGGAAT.............................................................................................................. 19 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................TTACGTATACTGAAAGCGTA............................................................................................................. 20 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................GGTATACCGGTAAGGA................................................................................................... 16 2 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

CTGCATCTAGATCCGCGACACGGCATAATTTTCAGCACTTTTGGATAATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGATAGCACGAGCAACGTGGGATGTGAAACACTTTTAATACACTTTAATACACGTAGCACTTTGTTA
****************************************************...((.((((.((((((((.((((((((((((.((((((..((......))....)).)))).))))))))))))..)))))))).))))))******************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
Ovary		 M025
embryo
 SRR553487
Ovary		 O001
Testis
 M053
Female-body		 GSM343915
embryo
 O002
Head
 SRR618934
Ovary		 SRR553485
Ovary		 M024
male body
 SRR553486
Ovary		 M023
head
........................................................................ACGTATACTGAATGTATCCTGA.......................................................................................................... 22 0 1 3627.00 3627 1303 871 822 137 140 130 103 34 38 19 24 6
........................................................................ACGTATACTGAATGTATCCTG........................................................................................................... 21 0 1 460.00 460 36 236 27 22 75 24 7 10 1 18 1 3
........................................................................ACGTATACTGAATGTATCCTGG.......................................................................................................... 22 1 1 205.00 205 0 199 0 0 0 0 0 0 0 3 0 3
........................................................................ACGTATACTGAATGTATCC............................................................................................................. 19 0 1 137.00 137 0 69 1 39 0 0 25 0 0 3 0 0
........................................................................ACGTATACTGAATGTATCCT............................................................................................................ 20 0 1 94.00 94 15 6 13 23 1 4 10 6 8 2 5 1
........................................................................ACGTATACTGAATTTATCCTGA.......................................................................................................... 22 1 1 43.00 43 3 36 4 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATC.............................................................................................................. 18 0 1 32.00 32 0 16 0 4 0 0 5 6 0 1 0 0
........................................................................ACGTATACTGAATGTATCCTGAA......................................................................................................... 23 1 1 27.00 27 3 19 3 0 0 0 0 0 0 1 1 0
.........................................................................CGTATACTGAATGTATCCTGA.......................................................................................................... 21 0 1 20.00 20 7 0 3 0 10 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATTTATCCTG........................................................................................................... 21 1 1 15.00 15 0 15 0 0 0 0 0 0 0 0 0 0
.........................................................................CGTATACTGAATGTATCCTGAT......................................................................................................... 22 1 1 13.00 13 3 5 3 0 0 2 0 0 0 0 0 0
........................................................................ACGTATACTGAATCTATCCTGA.......................................................................................................... 22 1 1 12.00 12 0 12 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TATACCTTCAGTATACGTAACA..................................................................... 22 0 1 12.00 12 7 0 2 0 0 3 0 0 0 0 0 0
.........................................................................CGTATACTGAATGTATCCTG........................................................................................................... 20 0 1 11.00 11 1 1 0 0 8 0 0 0 0 1 0 0
..........................................................................................................CGGTATACCTTCAGTATACGTAAC...................................................................... 24 0 1 11.00 11 0 4 1 3 0 1 2 0 0 0 0 0
........................................................................ACTTATACTGAATGTATCCTGA.......................................................................................................... 22 1 1 10.00 10 2 4 3 0 1 0 0 0 0 0 0 0
.........................................................................CGTATACTGAATGTATCCTGAA......................................................................................................... 22 1 1 10.00 10 2 4 4 0 0 0 0 0 0 0 0 0
..........................................................................................................CGGTATACCTTCAGTATACGTA........................................................................ 22 0 1 9.00 9 1 0 1 5 0 1 1 0 0 0 0 0
........................................................................ACGTATACTGAATTTATCCTGG.......................................................................................................... 22 2 1 8.00 8 0 8 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TATACCTTCAGTATACGTAAC...................................................................... 21 0 1 7.00 7 0 4 1 0 1 1 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATTC............................................................................................................. 19 1 1 7.00 7 0 7 0 0 0 0 0 0 0 0 0 0
................................................................................TGAATGTATCCTGAGTA....................................................................................................... 17 1 3 6.67 20 0 0 0 0 0 0 0 0 9 0 11 0
........................................................................ACGTATACTGAATGTATCCTGAT......................................................................................................... 23 1 1 6.00 6 1 3 0 0 1 0 0 0 1 0 0 0
..............................................................................ACTGAATGTATCCTGA.......................................................................................................... 16 0 1 5.00 5 1 0 1 0 0 0 0 3 0 0 0 0
..........................................................................................................CGGTATACCTTCAGTATACGTAA....................................................................... 23 0 1 5.00 5 2 0 1 0 0 1 0 1 0 0 0 0
......................................................................AAACGTATACTGAATGTATCCT............................................................................................................ 22 0 1 5.00 5 1 1 0 0 1 2 0 0 0 0 0 0
..........................................................................................................CGGTATACCTTCAGTATACG.......................................................................... 20 0 1 5.00 5 0 0 0 3 1 0 1 0 0 0 0 0
..........................................................................................................CGGTATACCTTCAGTATACGT......................................................................... 21 0 1 5.00 5 0 0 0 0 0 0 0 5 0 0 0 0
........................................................................ACGTATACTGAATGTATCCTTA.......................................................................................................... 22 1 1 4.00 4 1 0 0 0 2 1 0 0 0 0 0 0
........................................................................ACGTATACTGAATTTATCCT............................................................................................................ 20 1 1 4.00 4 0 3 0 0 0 0 0 0 0 0 1 0
........................................................................ACGTATACTGAATTTATCC............................................................................................................. 19 1 1 4.00 4 0 4 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATCTATCC............................................................................................................. 19 1 1 4.00 4 0 4 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGCATGTATCCTGA.......................................................................................................... 22 1 1 4.00 4 0 0 3 0 1 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATCCGG........................................................................................................... 21 1 1 4.00 4 0 4 0 0 0 0 0 0 0 0 0 0
............................................................................ATACTGAATGTATCCTGA.......................................................................................................... 18 0 1 4.00 4 0 0 0 0 0 0 0 4 0 0 0 0
........................................................................ACGTATACTGAATGTATCCTGC.......................................................................................................... 22 1 1 4.00 4 3 0 1 0 0 0 0 0 0 0 0 0
................................................................................TGAATGTATCCTGAGT........................................................................................................ 16 0 3 3.33 10 0 0 0 0 0 0 0 0 5 0 5 0
........................................................................ACGTATACTGATTGTATCCTGA.......................................................................................................... 22 1 1 3.00 3 1 0 1 0 1 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATCCCGA.......................................................................................................... 22 1 1 3.00 3 1 1 0 0 1 0 0 0 0 0 0 0
........................................................................ATGTATACTGAATGTATCCTGA.......................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
.........................................................................CGTATACTGAATGTATCCTGAC......................................................................................................... 22 1 1 3.00 3 0 1 0 0 1 1 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATCCTGT.......................................................................................................... 22 1 1 3.00 3 1 0 0 0 0 1 0 1 0 0 0 0
..........................................................................................................CGGTATACCTTCAGTATA............................................................................ 18 0 1 3.00 3 0 0 0 1 0 0 2 0 0 0 0 0
........................................................................ACGTATACTGAATCTATCCTG........................................................................................................... 21 1 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATCCTGAG......................................................................................................... 23 0 1 3.00 3 0 0 0 2 0 0 1 0 0 0 0 0
........................................................................ACGTATACTGAATGT................................................................................................................. 15 0 1 3.00 3 0 0 0 0 0 0 0 3 0 0 0 0
..........................................................................................................CGGTATACCTTCAGTATAC........................................................................... 19 0 1 3.00 3 0 1 0 1 1 0 0 0 0 0 0 0
......................................................................AAACGTATACTGAATGTATCCTG........................................................................................................... 23 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTAACCTGA.......................................................................................................... 22 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATCCTGAAAGT...................................................................................................... 26 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATTCTGA.......................................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATGCATCCTGA.......................................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................CGTGGACGTATACTGAATGTATCCTGA.......................................................................................................... 27 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTAAATGTATCCTGA.......................................................................................................... 22 1 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................ATACCTTCAGTATACGT......................................................................... 17 0 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0
...........................................................................................................GGTATACCTTCAGTATACG.......................................................................... 19 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATCCTCA.......................................................................................................... 22 1 1 2.00 2 0 0 0 0 1 1 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATCCCG........................................................................................................... 21 1 1 2.00 2 0 1 0 0 0 1 0 0 0 0 0 0
..........................................................................GTATACTGAATGTATCCTGA.......................................................................................................... 20 0 1 2.00 2 0 0 0 0 1 1 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATCCGA........................................................................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TATACCTTCAGTATACGTAACT..................................................................... 22 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................CACGTATACTGAATGTATCCTG........................................................................................................... 22 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGACTGTATCCTGA.......................................................................................................... 22 1 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATCCTGAAC........................................................................................................ 24 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACCGAATGTATCCTGA.......................................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................CGTATACTGAATGTATCCTGACT........................................................................................................ 23 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATCCTGAAA........................................................................................................ 24 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATGGATCCTGA.......................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................CGTATACTGAATGTATCCT............................................................................................................ 19 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATACTGA.......................................................................................................... 22 1 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................................AACGTATACTGAATGTATCCTG........................................................................................................... 22 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.........................................................................CGTATACTGAATGTATCCTGAAA........................................................................................................ 23 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTACCCTGA.......................................................................................................... 22 1 1 2.00 2 0 0 1 0 0 1 0 0 0 0 0 0
...................................................................CGTGGACGTATACTGAATGTATCCTG........................................................................................................... 26 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.................................................................................GAATGTATCCTGAGT........................................................................................................ 15 0 3 1.67 5 0 0 0 0 0 0 0 0 2 0 3 0
................................................................................TGAATGTATCCTGAG......................................................................................................... 15 0 3 1.67 5 0 0 0 0 0 0 0 0 3 0 2 0
........................................................................ACGTATTCTGAATGTATCCTGA.......................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................CGTATACTGAATGTATCCTGATT........................................................................................................ 23 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................CGTATACTGAATTTATCCTGAAA........................................................................................................ 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................GCGTATACTGAATGTATCCTGA.......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................CGTATACTAAATGTATCCTGAC......................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................CGTATAATGAATGTATCCTGA.......................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................ACGTACACTGAATGTATCCTGA.......................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................ACGTATATTGAATGTATCCTGA.......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................ACATACTGAATGTATCCTGA.......................................................................................................... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
........................................................................ACGTATACTGAATGGATCCTGC.......................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................ACGTATCCTGAATGTATCCTGA.......................................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................ACGTATACTTAATGTATCCTGA.......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGGATGTCTCCTGA.......................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................CGTATACTGAATTTATCCTGAA......................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTTTACTGAATGTATCCTGA.......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGCATGTATCCT............................................................................................................ 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................ACATATACTGAATGTATCCTGG.......................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATAATGAATGTTTCCTGA.......................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATCTTGA.......................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................CGTATACTGAATATATCCTTA.......................................................................................................... 21 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................CGTATACTGAATGTATCCTGGT......................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
........................................................................ACGTATACTGAATATATCCTG........................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................ACTTATACTGAATGTATCCTG........................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................ACGTATACTCAATGTATCCTCA.......................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATCGTGA.......................................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................ACGTATACTGCATGTATCCTGT.......................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATCCTGAGGCT...................................................................................................... 26 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................................TACCTTCAGTATACGTA........................................................................ 17 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................ACGTATACTGAATGTATCCTA........................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................ACTTATACTGAATGTATCCTC........................................................................................................... 21 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................ACGGATACTGAATGTATCCTGA.......................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
.........................................................................CGTATACTGAATGTATCC............................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................ACGTATACTGAATGTA................................................................................................................ 16 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................ACGGATACTGAATGTATACTGA.......................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................TATACTGAATGTATCCTGATA........................................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................CGGCATACCTTCAGTATACGTAAC...................................................................... 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................ACGTATAATGAATGTATCATGA.......................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................ACGGATACTGAATGTATCCTG........................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................CGTATACTGAATGTATCCTGG.......................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................CGGTATACCTTCAGT............................................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGGATGTATCCTGA.......................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAACGTATCCTGA.......................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGGATGTATCCTGG.......................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATGAATCCTGA.......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATGCTGAATGTATCCTGA.......................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................ACGTATACTGAATGTATCATGA.......................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTGTCCTGA.......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTTTCCTGA.......................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAACGTATCCTG........................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................ACGTATACTCAATGTATCCTGA.......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................AAACGTATACTGAATCTATCCT............................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATTTACCCTGA.......................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATCCTGAGT........................................................................................................ 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATTCTG........................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATCCTGAC......................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................CAGACGTATACTGAATGTATCCTGA.......................................................................................................... 25 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................ATACCTTCAGTATACGTAACA..................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................AAACGTACACTGAATGTATCCT............................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATCCTGAGGCG...................................................................................................... 26 3 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................ACGTATACTGAAATTATCCTGA.......................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................GGTATACCTTCAGTATACGTA........................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................CGGTATACCTTCAGTATCCGTAA....................................................................... 23 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATGCTGA.......................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATTTATCCTGT.......................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................AGGTATACTGAATGTATCCTGG.......................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTTTACTG........................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATCCTGACA........................................................................................................ 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................ACCTATACTGAATGTATCCTGA.......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................TATACTGAATGTATCCTGAAA........................................................................................................ 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................ACGTATACTGAATTTATCCGG........................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................CGTATACTGAATGTATCCTTA.......................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................ATACCTTCAGTATACGTAA....................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................CGTATACTGAATTTATCC............................................................................................................. 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................TATACTGAATGTATCCTG........................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................ACGTATACTGAATGAATCCTGG.......................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATACTGAATGTATCCTGAAT........................................................................................................ 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CACTTTAATACACGTAGCACT...... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................................CGTATACTGAATGTATCCGTA.......................................................................................................... 21 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................ACGTATACTGAACTTATCCTGA.......................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTATAATGAATGTATCCTG........................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................AAGTATACTGAATGTATACTGA.......................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................ACGTATAATGAATGTCTCCTGC.......................................................................................................... 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................ACATATACTGAATGTATCCTGA.......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................CGTATACTGACTGTCTCCTGAG......................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................AATGTATCCTGAGTA....................................................................................................... 15 1 10 0.90 9 0 0 0 0 0 0 0 0 3 0 6 0
.................................................................................GAATGTATCCTGAGTA....................................................................................................... 16 1 4 0.50 2 0 0 0 0 0 0 0 0 0 0 2 0
..............................................................................ACTGAATGTATCCTG........................................................................................................... 15 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................ACGTATACTGTATGTATCCTTG.......................................................................................................... 22 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................ACCTATACTGAATGTATTC............................................................................................................. 19 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
................................CAGCACTTTTGGAAAACGGC.................................................................................................................................................... 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1
........................................................................ACGCATACTGGATGTATCCTGC.......................................................................................................... 22 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................TATACTGAATGTCTCCTGACTT....................................................................................................... 22 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................TATACTGAATGTATCCTGAAAA....................................................................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TTGAATGTATCCTGA.......................................................................................................... 15 1 15 0.47 7 0 0 0 0 0 0 0 0 2 0 5 0
..........................................................................ACGTACTGAATGTATCCTGA.......................................................................................................... 20 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................TCTTGAATGTATCCTGAGTA....................................................................................................... 20 3 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................GCGTATACTGAATGTATC.............................................................................................................. 18 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................TGAGTGTATCCTGAGT........................................................................................................ 16 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0
...............................................................................CTTAATGTATCCTGA.......................................................................................................... 15 1 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................TGAATGTATCCTTAGT........................................................................................................ 16 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................TTAATGTATCCTGAGT........................................................................................................ 16 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0
...............................................................................TTGAATGTATCCTGAGTA....................................................................................................... 18 2 7 0.14 1 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................TGAATGTACCCTGAGTA....................................................................................................... 17 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1 0
CTGCATCTCGACCCGCG....................................................................................................................................................................................... 17 2 11 0.09 1 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................................GAATGTATCCTGAGTAC...................................................................................................... 17 2 13 0.08 1 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................TGAATGTATCTTGAG......................................................................................................... 15 1 18 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................TCTTGAATGTATCCTGA.......................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0
....................................AATTTTGGATAATGG..................................................................................................................................................... 15 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................GAATGTACCCTGAGTA....................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 3R:8791151-8791350 + dsi-mir-iab-8 TA-----------ACAAAG----------------------------TGCT--ACGTGTATTAAAGTGTAT----T------AAA---------------------AGTGT--TT--CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCG--------CCAT--TATC---CAAAAG----TG-CTGA----A------------AATTATGCCG--TGTCGCG-----------------GA----------------TCTAGATGCAG
droSec2 scaffold_12:1472178-1472378 + dse_312 TA-----------ACAAAG----------------------------TGCT--ACGTGTATTAAGATGTAT----T-A----AAA---------------------AGTGT--TT--CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCG--------CCAT--TATC---CAAAAG----TG-CTGA----A------------AATTATGCCG--TGTCGCG-----------------GA----------------TCTAGATGCAG
dm3 chr3R:12681931-12682131 - dme-mir-iab-8 TA-----------ACAAAG----------------------------TGCT--ACGTGTATTAAGGTGTCT----T-A----AAA---------------------AGTGT--TT--CACATCCCACGTTGTTAGTGCTCTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCG--------CCAT--TATT---CAAAAG----TG-CTGA----A------------AATTATGCGT--CGTCGCG-----------------GA----------------TCCAAATGCAG
droEre2 scaffold_4770:8952350-8952550 + der_113 TA-----------ACAAAG----------------------------TGCT--ACGTGTATTGTAGAGTCT----T-A----AAA---------------------AGTGT--TT--CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCG--------CCTT--AATC---CAAAAG----TG-CTGA----A------------AATTATACGT--CGTCGCG-----------------GA----------------TCCAGATGCAG
droYak3 3R:11708901-11709101 + dya_90 TA-----------ACACAG----------------------------TGCT--ACGTGTATTAAGCAGTAT----T-A----AAA---------------------AGTGT--TT--CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCG--------CCTT--AGTC---CAAAAG----TG-CTGA----A------------AATTACGCGT--CGTCGCG-----------------GA----------------TCGAGATGTGG
droEug1 scf7180000409804:92862-93048 - ---------------AAAG----------------------------TGTT--TTGTGGTTTTT--------------AAAGTAA---------------------ACTGT--TT--CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCA--------CTAT--AATC---CGAAAG----TG-ACCA----A------------AATGAAG--------TGCA-----------------GT----------------TCCAGATGCAG
droBia1 scf7180000299102:622727-622919 - AA-------ATC-ACA-------------------------------------ACGTGTTTTCA--------------AAAATAA---------------------AGTGT--TT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCA--------CCAT--AATC---CAAAAG----TG-CCGA----G------------AAAGATGCGC--CGCTGCA-----------------GA----------------TCCAGATCCAG
droTak1 scf7180000411269:86525-86729 - TC-----------ACAAAG----------------------------TGTT--CCGTTTCGTC--GAGTTT----TAAAAAGAAA---------------------AGTGT--TT--CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCA--------CCAT--AATC---CAAAAG----TG-CCAA----AG-----------AAGGATGCGC--CGCTGCA-----------------GT----------------TCCAGGTGCAG
droEle1 scf7180000486474:1729407-1729588 - TC-----------AC--AG----------------------------TGCCCTAAATTA--CATATATTTT----T--AAAGTAA---------------------AGTGT--TT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCA--------CCAT--AATC---CGAAAG----TG-ACG--------------------------------ATGCA---------------------------------------GTTGCAG
droRho1 scf7180000759657:23939-24141 - TC-----------ACAATG----------------------------TGTT--CCGT--ATTCAACAGTTT----T-AACAGTAA---------------------AGTGT--TT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCA--------CCAT--AATC---CGAAAG----TG-CCAA----A------------CAGGATGCGT--CGCTGCA-----------------GT----------------TGCAGATGAAG
droFic1 scf7180000452523:122308-122506 - TA-------AT---CACAG----------------------------TGCT--AAGTGTTTTAAG----------------GAAA---------------------AGTGT--TT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCA--------CTATGAAATCCGGCGAAAG----TGACTGA----A------------A--GACGTGT--CGCTGCA-----------------GT----------------TCGTGATGCAG
droKik1 scf7180000302313:151124-151318 - TAAA-----AT---CACAA----------------------------TGTC--ATATATTT---------T----T-T----TCA---------------------AGTGT--TT--CACATCCCGCGTTGCTTGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGAGTCA--------TCAT--CATC---CGCAAG----TG-CTTA----TAAAGGACACGAAAAAGGA--------CTGCA---------------------------------------GTTGCAG
droAna3 scaffold_13340:7215122-7215314 + dan_56 TTTAATTCTATTATAAAAG----------------------------TGCT--TAGTGTTTTAAATATTTCAGAAT-A----TTA---------------------AGT-T--TT--CACGTCCCGCGTTGAAGGTGTTACCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCA--------CCAT--CCTC---CGTAAT----G--------------------------------T--TCT----------------------------------------AGTGCTGCAA
droBip1 scf7180000396708:1638830-1639023 - TG-------ATTTTAAAAG----------------------------TGTT--TAGTGTTTGAAATATTTC----T--AAAACAA---------------------AGT-T--TT--CACGTCCCGCGTTGAAAGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCA--------CCAT--CCAT---CGTAAT----TT-TCTG----G------------TAAGATA-GTAGTGCTGC-----------------------------------------------
dp5 2:17671700-17671913 - dps-mir-iab-8 AG-----------ACAAAGTGTTACAAAGTGCAAGAATAAATCACAGTGCT--CGGTTT------------------------------------------------CAGT--TCGACGTATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCA--------TCCT--A------CATAAC----CG-CTGAAAGAA------------AATTACGAG------TGCAGTCGAAAG---------GA----------------TCC----GCAG
droPer2 scaffold_0:11526506-11526722 - dpe_160 TT-----------ACAAAG----------TGCTAGAATAAATCACAGTGCT--CGGTTT-----ACACGTT----T-A----AAT---------------------TCAGT--TCGACATATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCA--------TCCT--A------CATAAC----CG-CTGAAAGAA------------AATTACGAA------TGCAGTCGAAAG---------GA----------------TCC----GCAG
droWil2 scf2_1100000004943:4905554-4905711 + AA-----------AAGAA---------------------------------------------------------T-A----AAA---------------------AGTGT--TTCACACATCCCGCGTTGTTGGTGTTTCATCGTGTTACGTATACTGAAGGTATACCGGATAGCATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGATTCA--------TCT----------GGAAAG----TG-ACC-------------------------GGT--ACC--CG---------------------------------------GTGACCG
droVir3 scaffold_12855:414636-414837 + dvi_136 -------------ACAAAG----------------------------TGTT--TTG---------GTGTTT----T-A-----------TTTTAATGCAATCTAAATATAT--CA--CACATCCCGCGTCGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCT--------ACA-----------ATAAG----TG-CT----------------------------C--CGCTATA--------AACACCTCAGTTTTCATCGCACGCTCTTC---------
droMoj3 scaffold_6540:1943711-1943850 - dmo_140 TA-----------TTGAAG-----------------------------------------------------------------------------------------T-T--TTCACACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCAACAATTCGC----------------------TC-CTGA----A------------AA---------------------------------------------------------------
droGri2 scaffold_14906:12815069-12815280 - dgr_28 CA-----------ACAGAT----------------------------TGCTC-AAGTGTGACAAAGTGTTT----T---CAGTGTATTATT-TATCGAAATTTATATATATACAAAACACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGTTC-----------------TA---CAAGAGTGTCCT-TTGG----------------------AGTGT--CCC----------------------------------------CCCGGTGTAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
TA-----------ACAAAG----------------------------TGCT--ACGTGTATTAAAGTGTAT----T------AAA---------------------AGTGT--TT--CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCG--------CCAT--TATC---CAAAAG----TG-CTGA----A------------AATTATGCCG--TGTCGCG-----------------GA----------------TCTAGATGCAGSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
.........................................................................................................................................................................................GGATACATTCAGTATACGTTTACG........................................................................................................................................241196.0019600001942000000
........................................................................................................................................................................................AGGATACATTCAGTATACGTTTACG........................................................................................................................................251142.0014200001420000000
........................................................................................................................................................................................AGGATACATTCAGTATACGTTT...........................................................................................................................................221109.0010900001071100000
...................................................................................................................................................TTACGTATACTGAAGGTA....................................................................................................................................................................................181106.001060000996001000
...................................................................................................................................................TTACGTATACTGAAGGTATACCGG..............................................................................................................................................................................241105.001053000261101022393
...................................................................................................................................................TTACGTATACTGAAGGTAT...................................................................................................................................................................................191105.0010531241610335112
...................................................................................................................................................TTACGTATACTGAAGGTATA..................................................................................................................................................................................201103.001035022842800000
...................................................................................................................................................TTACGTATACTGAAGGTATACC................................................................................................................................................................................22173.007327075402400420
...................................................................................................................................................TTACGTATACTGAAGGTATAC.................................................................................................................................................................................21148.00486040503010011
........................................................................................................................................................................................AGGATACATTCAGTATAC...............................................................................................................................................18138.00380000380000000
........................................................................................................................................................................................AGGATACATTCAGTATACG..............................................................................................................................................19134.00340000331000000
...................................................................................................................................................TTACGTATACTGAAGGTATACCGGA.............................................................................................................................................................................25126.0026402560100251
........................................................................................................................................................................................AGGATACATTCAGTATACGT.............................................................................................................................................20120.00200000200000000
.........................................................................................................................................................................................GGATACATTCAGTATACGTTT...........................................................................................................................................21119.00190000181000000
...................................................................................................................................................TTACGTATACTGAAGGTATACCG...............................................................................................................................................................................23118.00180002140100001
.........................................................................................................................................................................................GGATACATTCAGTATACG..............................................................................................................................................18115.00150000150000000
.........................................................................................................................................................................................GGATACATTCAGTATACGT.............................................................................................................................................19111.00110000110000000
.........................................................................................................................................................................................GGATACATTCAGTATACGTT............................................................................................................................................20111.00110000110000000
........................................................................................................................................................................................AGGATACATTCAGTATACGTT............................................................................................................................................2119.009000090000000
....................................................................................................................................................TACGTATACTGAAGGTAT...................................................................................................................................................................................1818.008000061100000
.........................................................................................................................................................................................GGATACATTCAGTATACGTTTA..........................................................................................................................................2217.007200050000000
....................................................................................................................................................TACGTATACTGAAGGTATACCGG..............................................................................................................................................................................2317.007000040100011
....................................................................................................................................................TACGTATACTGAAGGTATACCG...............................................................................................................................................................................2216.006000040200000
................................................................................................................................TTGCTCGTGCTATCTCGTG......................................................................................................................................................................................................1916.006200300000001
....................................................................................................................................................TACGTATACTGAAGGTATACCGGA.............................................................................................................................................................................2415.005001020001010
.........................................................................................................................................................................................GGATACATTCAGTATACGTTTAC.........................................................................................................................................2314.004000040000000
....................................................................................................................................................TACGTATACTGAAGGTATACC................................................................................................................................................................................2113.003000000300000
...............................................................................................................................GTTGCTCGTGCTATCTCGTG......................................................................................................................................................................................................2012.002000200000000
....................................................................................................................................................TACGTATACTGAAGGTATAC.................................................................................................................................................................................2012.002000020000000
...................................................................................................................................................TTACGTATACTGAAGGTATACCGGAT............................................................................................................................................................................2612.002001010000000
....................................................................................................................................................TACGTATACTGAAGGTATA..................................................................................................................................................................................1912.002000020000000
..........................................................................................................................................................................................GATACATTCAGTATACGTTTA..........................................................................................................................................2111.001000010000000
..........................................................................................................................................................................GATAGGATACACTCAGGATACATTCA.....................................................................................................................................................2611.001001000000000
..............................................................................................................................................................................................CATTCAGTATACGTTTACG........................................................................................................................................1911.001000010000000
..................................................................................................................................................GTTACGTATACTGAAGGTATACCGGA.............................................................................................................................................................................2611.001000100000000
....................................................................................................................................................TACGTATACTGAAGGTATACCGGAT............................................................................................................................................................................2511.001000010000000
............................................................................................................................................................................TAGGATACACTCAGGATACATTCAGT...................................................................................................................................................2611.001100000000000
.........................................................................................................................................................ATACTGAAGGTATACCGG..............................................................................................................................................................................1811.001000000000001
...................................................................................................................................................TTACGTATACTGAAGGT.....................................................................................................................................................................................1711.001000000010000
..............................................................................................................................CGTTGCTCGTGCTATCTCGTG......................................................................................................................................................................................................2111.001000000000100
........................................................................................................................................................................................AGGATACATTCAGTATACGTTTAC.........................................................................................................................................2411.001000010000000
..........................................................................................................................................................................................GATACATTCAGTATACGT.............................................................................................................................................1811.001000010000000
........................................................................................................................................................................................AGGATACATTCAGTATACGTTTA..........................................................................................................................................2311.001100000000000
droSec2
TA-----------ACAAAG----------------------------TGCT--ACGTGTATTAAGATGTAT----T-A----AAA---------------------AGTGT--TT--CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCG--------CCAT--TATC---CAAAAG----TG-CTGA----A------------AATTATGCCG--TGTCGCG-----------------GA----------------TCTAGATGCAGSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
...................................................................................................................................................TTACGTATACTGAAGGTAT...................................................................................................................................................................................191185.0018594132751
...................................................................................................................................................TTACGTATACTGAAGGTATACC................................................................................................................................................................................221130.001301634179
...................................................................................................................................................TTACGTATACTGAAGGTATA..................................................................................................................................................................................20170.00702110534
...................................................................................................................................................TTACGTATACTGAAGGTATACCGG..............................................................................................................................................................................24156.0056117038
...................................................................................................................................................TTACGTATACTGAAGGTATAC.................................................................................................................................................................................21147.0047103331
...................................................................................................................................................TTACGTATACTGAAGGTATACCG...............................................................................................................................................................................23127.0027213012
...................................................................................................................................................TTACGTATACTGAAGGTATACCGGA.............................................................................................................................................................................25117.00172906
...................................................................................................................................................TTACGTATACTGAAGGTA....................................................................................................................................................................................18115.001501320
........................................................................................................................................................................................AGGATACATTCAGTATACGTTTA..........................................................................................................................................2319.0093303
....................................................................................................................................................TACGTATACTGAAGGTATAC.................................................................................................................................................................................2018.0080008
........................................................................................................................................................................................AGGATACATTCAGTATACGTTT...........................................................................................................................................2217.0071213
....................................................................................................................................................TACGTATACTGAAGGTAT...................................................................................................................................................................................1815.0050005
....................................................................................................................................................TACGTATACTGAAGGTATACC................................................................................................................................................................................2114.0040004
....................................................................................................................................................TACGTATACTGAAGGTATACCGG..............................................................................................................................................................................2314.0040004
.................................................................................................................................................TGTTACGTATACTGAAGGTAT...................................................................................................................................................................................2114.0042200
................................................................................................................................TTGCTCGTGCTATCTCGTG......................................................................................................................................................................................................1913.0030300
....................................................................................................................................................TACGTATACTGAAGGTATACCGGA.............................................................................................................................................................................2413.0030102
.........................................................................................................................................................................................GGATACATTCAGTATACGTTTA..........................................................................................................................................2213.0031101
.........................................................................................................................................................ATACTGAAGGTATACCGG..............................................................................................................................................................................1812.0020200
....................................................................................................................................................TACGTATACTGAAGGTATA..................................................................................................................................................................................1912.0020002
...............................................................................................................................GTTGCTCGTGCTATCTCGTG......................................................................................................................................................................................................2011.0010100
.........................................................................................................................................................................................GGATACATTCAGTATACGTTT...........................................................................................................................................2111.0010001
......................................................................................................................................................CGTATACTGAAGGTATACCGGA.............................................................................................................................................................................2211.0010100
....................................................................................................................................................TACGTATACTGAAGGTATACCG...............................................................................................................................................................................2211.0010001
...................................................................................................................................................TTACGTATACTGAAGGTATACCGGATA...........................................................................................................................................................................2711.0010100
droEre2
TA-----------ACAAAG----------------------------TGCT--ACGTGTATTGTAGAGTCT----T-A----AAA---------------------AGTGT--TT--CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCG--------CCTT--AATC---CAAAAG----TG-CTGA----A------------AATTATACGT--CGTCGCG-----------------GA----------------TCCAGATGCAGSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
...................................................................................................................................................TTACGTATACTGAAGGTAT...................................................................................................................................................................................191533.005334437581690
...................................................................................................................................................TTACGTATACTGAAGGTATACC................................................................................................................................................................................221264.002649181415577
...................................................................................................................................................TTACGTATACTGAAGGTATAC.................................................................................................................................................................................211143.0014332889626
...................................................................................................................................................TTACGTATACTGAAGGTATA..................................................................................................................................................................................201105.001051701214557
...................................................................................................................................................TTACGTATACTGAAGGTATACCGG..............................................................................................................................................................................24195.00951060835
...................................................................................................................................................TTACGTATACTGAAGGTATACCG...............................................................................................................................................................................23134.00340130282
....................................................................................................................................................TACGTATACTGAAGGTATACC................................................................................................................................................................................21113.00130000121
....................................................................................................................................................TACGTATACTGAAGGTATAC.................................................................................................................................................................................20113.00130010120
...................................................................................................................................................TTACGTATACTGAAGGTA....................................................................................................................................................................................1819.009000810
....................................................................................................................................................TACGTATACTGAAGGTATACCGG..............................................................................................................................................................................2318.008000080
...................................................................................................................................................TTACGTATACTGAAGGTATACCGGA.............................................................................................................................................................................2517.007102031
................................................................................................................................TTGCTCGTGCTTTCTCGTG......................................................................................................................................................................................................1916.006003201
....................................................................................................................................................TACGTATACTGAAGGTATACCG...............................................................................................................................................................................2215.005000050
........................................................................................................................................................................................AGGATACATTCAGTATACGTTT...........................................................................................................................................2215.005112010
....................................................................................................................................................TACGTATACTGAAGGTATA..................................................................................................................................................................................1913.003000030
.........................................................................................................................................................................................GGATACATTCAGTATACGTTTA..........................................................................................................................................2212.002000011
....................................................................................................................................................TACGTATACTGAAGGTAT...................................................................................................................................................................................1812.002000020
........................................................................................................................................................................................AGGATACATTCAGTATACGTTTA..........................................................................................................................................2312.002100010
.................................................................................................................................................TGTTACGTATACTGAAGGTAT...................................................................................................................................................................................2112.002002000
.............................................................................................................................ACGTTGCTCGTGCTTTCTCGTG......................................................................................................................................................................................................2212.002000200
..................................................................................................................................................GTTACGTATACTGAAGGTATACC................................................................................................................................................................................2311.001000010
............................................................................................................................................................................TAGGATACACTCAGGATACATTCA.....................................................................................................................................................2411.001000100
....................................................................................................................................................TACGTATACTGAAGGTATACCGGA.............................................................................................................................................................................2411.001000010
.........................................................................................................................................................................................GGATACATTCAGTATACGTTT...........................................................................................................................................2111.001000010
................................................................................................................................TTGCTCGTGCTTTCTCGTGT.....................................................................................................................................................................................................2011.001000010
.........................................................................................................................................................................................GGATACATTCAGTATACGTT............................................................................................................................................2011.001000010
......................................................................................................................................................CGTATACTGAAGGTATAC.................................................................................................................................................................................1811.001000010
...............................................................................................................................GTTGCTCGTGCTTTCTCGTG......................................................................................................................................................................................................2011.001001000
..................................................................................................................................................GTTACGTATACTGAAGGTATA..................................................................................................................................................................................2111.001000010
droYak3
TA-----------ACACAG----------------------------TGCT--ACGTGTATTAAGCAGTAT----T-A----AAA---------------------AGTGT--TT--CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCG--------CCTT--AGTC---CAAAAG----TG-CTGA----A------------AATTACGCGT--CGTCGCG-----------------GA----------------TCGAGATGTGGSizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
...................................................................................................................................................TTACGTATACTGAAGGTATACC................................................................................................................................................................................221529.0052931200106417
...................................................................................................................................................TTACGTATACTGAAGGTATAC.................................................................................................................................................................................211270.0027060200141121
...................................................................................................................................................TTACGTATACTGAAGGTAT...................................................................................................................................................................................191131.00131145350680
...................................................................................................................................................TTACGTATACTGAAGGTATA..................................................................................................................................................................................20191.00911406005021
...................................................................................................................................................TTACGTATACTGAAGGTATACCGG..............................................................................................................................................................................24186.0086500004239
...................................................................................................................................................TTACGTATACTGAAGGTATACCG...............................................................................................................................................................................23123.002311100164
....................................................................................................................................................TACGTATACTGAAGGTATACC................................................................................................................................................................................21116.001600000151
....................................................................................................................................................TACGTATACTGAAGGTATAC.................................................................................................................................................................................2018.0080000080
........................................................................................................................................................................................AGGATACATTCAGTATACGTTTA..........................................................................................................................................2316.0062000004
....................................................................................................................................................TACGTATACTGAAGGTATACCGG..............................................................................................................................................................................2315.0050000050
........................................................................................................................................................................................AGGATACATTCAGTATACGTTT...........................................................................................................................................2215.0050000023
....................................................................................................................................................TACGTATACTGAAGGTAT...................................................................................................................................................................................1814.0040000040
...................................................................................................................................................TTACGTATACTGAAGGTATACCGGA.............................................................................................................................................................................2514.0042000002
.................................................................................................................................................TGTTACGTATACTGAAGGTATA..................................................................................................................................................................................2213.0030000003
.........................................................................................................................................................................................GGATACATTCAGTATACGTTTA..........................................................................................................................................2213.0030000003
...................................................................................................................................................TTACGTATACTGAAGGTA....................................................................................................................................................................................1812.0020000011
........................................................................................................................................................................................AGGATACATTCAGTATACGTT............................................................................................................................................2112.0020000002
.........................................................................................................................................................................................GGATACATTCAGTATACGTTT...........................................................................................................................................2112.0020000002
.....................................................................................................................................................ACGTATACTGAAGGTATACCGG..............................................................................................................................................................................2211.0010000010
................................................................................................................................TTGCTCGTGCTTTCTCGTG......................................................................................................................................................................................................1911.0010000001
..................................................................................................................................................GTTACGTATACTGAAGGTAT...................................................................................................................................................................................2011.0010010000
....................................................................................................................................................TACGTATACTGAAGGTATACCG...............................................................................................................................................................................2211.0010000010
..............................................................................................................................CGTTGCTCGTGCTTTCTCGTG......................................................................................................................................................................................................2111.0010010000
....................................................................................................................................................TACGTATACTGAAGGTATACCGGA.............................................................................................................................................................................2411.0010000010
..................................................................................................................................................GTTACGTATACTGAAGGTATAC.................................................................................................................................................................................2211.0010000001
.....................................................................................................................................................ACGTATACTGAAGGTATAC.................................................................................................................................................................................1911.0010000010
......................................................................................................................................................CGTATACTGAAGGTATACC................................................................................................................................................................................1911.0010000010
.....................................................................................................................................................ACGTATACTGAAGGTATACC................................................................................................................................................................................2011.0010000010
.......................................................................................................................................................GTATACTGAAGGTATACCG...............................................................................................................................................................................1911.0010000010
....................................................................................................................................................TACGTATACTGAAGGTATA..................................................................................................................................................................................1911.0010000010
droEug1
---------------AAAG----------------------------TGTT--TTGTGGTTTTT--------------AAAGTAA---------------------ACTGT--TT--CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCA--------CTAT--AATC---CGAAAG----TG-ACCA----A------------AATGAAG--------TGCA-----------------GT----------------TCCAGATGCAGSizeHit CountTotal NormTotal
No Reads
droBia1
AA-------ATC-ACA-------------------------------------ACGTGTTTTCA--------------AAAATAA---------------------AGTGT--TT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCA--------CCAT--AATC---CAAAAG----TG-CCGA----G------------AAAGATGCGC--CGCTGCA-----------------GA----------------TCCAGATCCAGSizeHit CountTotal NormTotal
No Reads
droTak1
TC-----------ACAAAG----------------------------TGTT--CCGTTTCGTC--GAGTTT----TAAAAAGAAA---------------------AGTGT--TT--CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCA--------CCAT--AATC---CAAAAG----TG-CCAA----AG-----------AAGGATGCGC--CGCTGCA-----------------GT----------------TCCAGGTGCAGSizeHit CountTotal NormTotal
No Reads
droEle1
TC-----------AC--AG----------------------------TGCCCTAAATTA--CATATATTTT----T--AAAGTAA---------------------AGTGT--TT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCA--------CCAT--AATC---CGAAAG----TG-ACG--------------------------------ATGCA---------------------------------------GTTGCAGSizeHit CountTotal NormTotal
No Reads
droRho1
TC-----------ACAATG----------------------------TGTT--CCGT--ATTCAACAGTTT----T-AACAGTAA---------------------AGTGT--TT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCA--------CCAT--AATC---CGAAAG----TG-CCAA----A------------CAGGATGCGT--CGCTGCA-----------------GT----------------TGCAGATGAAGSizeHit CountTotal NormTotal
No Reads
droFic1
TA-------AT---CACAG----------------------------TGCT--AAGTGTTTTAAG----------------GAAA---------------------AGTGT--TT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCA--------CTATGAAATCCGGCGAAAG----TGACTGA----A------------A--GACGTGT--CGCTGCA-----------------GT----------------TCGTGATGCAGSizeHit CountTotal NormTotal
No Reads
droKik1
TAAA-----AT---CACAA----------------------------TGTC--ATATATTT---------T----T-T----TCA---------------------AGTGT--TT--CACATCCCGCGTTGCTTGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGAGTCA--------TCAT--CATC---CGCAAG----TG-CTTA----TAAAGGACACGAAAAAGGA--------CTGCA---------------------------------------GTTGCAGSizeHit CountTotal NormTotal
No Reads
droAna3
TTTAATTCTATTATAAAAG----------------------------TGCT--TAGTGTTTTAAATATTTCAGAAT-A----TTA---------------------AGT-T--TT--CACGTCCCGCGTTGAAGGTGTTACCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCA--------CCAT--CCTC---CGTAAT----G--------------------------------T--TCT----------------------------------------AGTGCTGCAASizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
...................................................................................................................................................TTACGTATACTGAAGGTAT...................................................................................................................................................................................191232.0023215325100440
...................................................................................................................................................TTACGTATACTGAAGGTATACC................................................................................................................................................................................22189.008936522944
...................................................................................................................................................TTACGTATACTGAAGGTATACCGG..............................................................................................................................................................................24147.00470830333
...................................................................................................................................................TTACGTATACTGAAGGTATA..................................................................................................................................................................................20145.00458800254
...................................................................................................................................................TTACGTATACTGAAGGTATAC.................................................................................................................................................................................21129.00292000207
.................................................................................................................................................TGTTACGTATACTGAAGGTAT...................................................................................................................................................................................21118.00181131030
...................................................................................................................................................TTACGTATACTGAAGGTATACCG...............................................................................................................................................................................23110.0010310060
....................................................................................................................................................TACGTATACTGAAGGTATACC................................................................................................................................................................................2114.004000031
....................................................................................................................................................TACGTATACTGAAGGTAT...................................................................................................................................................................................1814.004000040
.........................................................................................................................................................................................GGATACATTCAGTATACGTATA..........................................................................................................................................2214.004000013
........................................................................................................................................................................................AGGATACATTCAGTATACGT.............................................................................................................................................2013.003300000
....................................................................................................................................................TACGTATACTGAAGGTATACCG...............................................................................................................................................................................2212.002000020
....................................................................................................................................................TACGTATACTGAAGGTATA..................................................................................................................................................................................1912.002000020
...................................................................................................................................................TTACGTATACTGAAGGTATACCGGA.............................................................................................................................................................................2512.002000020
.....................................................................................................................................................ACGTATACTGAAGGTATACC................................................................................................................................................................................2011.001000010
....................................................................................................................................................TACGTATACTGAAGGTATAC.................................................................................................................................................................................2011.001000010
......................................................................................................................................................CGTATACTGAAGGTATACCGG..............................................................................................................................................................................2111.001000010
.................................................................................................................................................TGTTACGTATACTGAAGGTATACC................................................................................................................................................................................2411.001000001
..................................................................................................................................................................................ACACTCAGGATACATTCAG....................................................................................................................................................1911.001000001
.........................................................................................................................................................................................GGATACATTCAGTATACGTAT...........................................................................................................................................2111.001000001
........................................................................................................................................................................................AGGATACATTCAGTATACGTAT...........................................................................................................................................2211.001000010
.................................................................................................................................................TGTTACGTATACTGAAGGT.....................................................................................................................................................................................1960.171000010
droBip1
TG-------ATTTTAAAAG----------------------------TGTT--TAGTGTTTGAAATATTTC----T--AAAACAA---------------------AGT-T--TT--CACGTCCCGCGTTGAAAGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCA--------CCAT--CCAT---CGTAAT----TT-TCTG----G------------TAAGATA-GTAGTGCTGC-----------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
AG-----------ACAAAGTGTTACAAAGTGCAAGAATAAATCACAGTGCT--CGGTTT------------------------------------------------CAGT--TCGACGTATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCA--------TCCT--A------CATAAC----CG-CTGAAAGAA------------AATTACGAG------TGCAGTCGAAAG---------GA----------------TCC----GCAGSizeHit CountTotal NormTotalV112
Male-body		V043
Embryo		V051
Head		M022
Male-body		M040
Female-body		M059
Embryo		M062
Head
...................................................................................................................................................TTACGTATACTGAAGGTATAC.................................................................................................................................................................................211725.00725915606115628
...................................................................................................................................................TTACGTATACTGAAGGTAT...................................................................................................................................................................................191384.0038499537124101
...................................................................................................................................................TTACGTATACTGAAGGTATA..................................................................................................................................................................................201366.00366113730299610
...................................................................................................................................................TTACGTATACTGAAGGTATACC................................................................................................................................................................................221319.003192155010515735
...................................................................................................................................................TTACGTATACTGAAGGTATACCGG..............................................................................................................................................................................24156.005603104840
....................................................................................................................................................TACGTATACTGAAGGTATAC.................................................................................................................................................................................20132.003200003110
....................................................................................................................................................TACGTATACTGAAGGTATA..................................................................................................................................................................................19130.003000003000
....................................................................................................................................................TACGTATACTGAAGGTAT...................................................................................................................................................................................18128.002800002800
...................................................................................................................................................TTACGTATACTGAAGGTATACCG...............................................................................................................................................................................23114.001401001210
...................................................................................................................................................TTACGTATACTGAAGGTATACCGGA.............................................................................................................................................................................25111.00112110700
....................................................................................................................................................TACGTATACTGAAGGTATACC................................................................................................................................................................................21111.001100001100
........................................................................................................................................................................................AGGATACATTCAGTATACGTATA..........................................................................................................................................23110.00100200080
.........................................................................................................................................................................................GGATACATTCAGTATACGTATA..........................................................................................................................................2216.0060000060
......................................................................................................................................................CGTATACTGAAGGTATACCGGA.............................................................................................................................................................................2215.0050300200
....................................................................................................................................................TACGTATACTGAAGGTATACCGG..............................................................................................................................................................................2314.0040000400
........................................................................................................................................................................................AGGATACATTCAGTATACGTA............................................................................................................................................2114.0040000130
........................................................................................................................................................................................AGGATACATTCAGTATACGTAT...........................................................................................................................................2214.0040000310
.....................................................................................................................................................ACGTATACTGAAGGTATAC.................................................................................................................................................................................1913.0030000300
........................................................................................................................................................................................AGGATACATTCAGTATACGT.............................................................................................................................................2012.0022000000
...................................................................................................................................................TTACGTATACTGAAGGTA....................................................................................................................................................................................1812.0020100100
.....................................................................................................................................................ACGTATACTGAAGGTATACCG...............................................................................................................................................................................2111.0010000100
............................................................................................................................................................................................TACATTCAGTATACGTATA..........................................................................................................................................1911.0010000100
..........................................................................................................................................................................................GATACATTCAGTATACGTATAC.........................................................................................................................................2211.0010000010
.........................................................................................................................................................................................................................................................................GAA------------AATTACGAG------TGCAGTCGAAAG---------GA----------------...........2611.0010000010
.....................................................................................................................................................ACGTATACTGAAGGTATACCGG..............................................................................................................................................................................2211.0010000100
............................................................................................................AGT--TCGACGTATCCCGCGTTGCT....................................................................................................................................................................................................................2311.0010100000
.................................................................................................................................................TGTTACGTATACTGAAGGTAT...................................................................................................................................................................................2111.0011000000
......................................................................................................................................................CGTATACTGAAGGTATACCGG..............................................................................................................................................................................2111.0010000100
........................................................................................................................................................................................AGGATACATTCAGTATACGTATAC.........................................................................................................................................2411.0010000100
droPer2
TT-----------ACAAAG----------TGCTAGAATAAATCACAGTGCT--CGGTTT-----ACACGTT----T-A----AAT---------------------TCAGT--TCGACATATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCA--------TCCT--A------CATAAC----CG-CTGAAAGAA------------AATTACGAA------TGCAGTCGAAAG---------GA----------------TCC----GCAGSizeHit CountTotal NormTotalV111
Male-body		V042
Embryo		V050
Head		V057
Head		M021
Embryo		M042
Female-body
...................................................................................................................................................TTACGTATACTGAAGGTAT...................................................................................................................................................................................191543.00543505562025
...................................................................................................................................................TTACGTATACTGAAGGTATA..................................................................................................................................................................................20164.0064281911015
...................................................................................................................................................TTACGTATACTGAAGGTATAC.................................................................................................................................................................................21146.00464300039
...................................................................................................................................................TTACGTATACTGAAGGTATACC................................................................................................................................................................................22124.00241200219
...................................................................................................................................................TTACGTATACTGAAGGTATACCGG..............................................................................................................................................................................24111.0011210008
....................................................................................................................................................TACGTATACTGAAGGTATACC................................................................................................................................................................................2112.002000002
....................................................................................................................................................TACGTATACTGAAGGTATACCGG..............................................................................................................................................................................2312.002000002
....................................................................................................................................................TACGTATACTGAAGGTATACCG...............................................................................................................................................................................2211.001000001
........................................................................................................................................................................................AGGATACATTCAGTATACGT.............................................................................................................................................2011.001100000
....................................................................................................................................................TACGTATACTGAAGGTAT...................................................................................................................................................................................1811.001000001
....................................................................................................................................................TACGTATACTGAAGGTATAC.................................................................................................................................................................................2011.001000001
....................................................................................................................................................TACGTATACTGAAGGTATACCGGA.............................................................................................................................................................................2411.001000001
.........................................................................................................................................................................................GGATACATTCAGTATACGTATA..........................................................................................................................................2211.001000001
........................................................................................................................ATCCCGCGTTGCTGGTGTTTCCTCGTG......................................................................................................................................................................................................2711.001000010
....................................................................................................................................................TACGTATACTGAAGGTATA..................................................................................................................................................................................1911.001000001
...................................................................................................................................................TTACGTATACTGAAGGTATACCG...............................................................................................................................................................................2311.001000001
......................................................................................................................................................CGTATACTGAAGGTATACCGG..............................................................................................................................................................................2111.001000001
droWil2
AA-----------AAGAA---------------------------------------------------------T-A----AAA---------------------AGTGT--TTCACACATCCCGCGTTGTTGGTGTTTCATCGTGTTACGTATACTGAAGGTATACCGGATAGCATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGATTCA--------TCT----------GGAAAG----TG-ACC-------------------------GGT--ACC--CG---------------------------------------GTGACCGSizeHit CountTotal NormTotalV117
Male-body		V118
Embryo		V119
Head		M020
Head		M045
Female-body
...................................................................................................................................................TTACGTATACTGAAGGTAT...................................................................................................................................................................................191236.002366723171128
...................................................................................................................................................TTACGTATACTGAAGGTATAC.................................................................................................................................................................................211224.0022414321177
...................................................................................................................................................TTACGTATACTGAAGGTATA..................................................................................................................................................................................201135.001356448077
...................................................................................................................................................TTACGTATACTGAAGGTATACCGG..............................................................................................................................................................................24187.00870290058
...................................................................................................................................................TTACGTATACTGAAGGTATACC................................................................................................................................................................................22166.00661222041
...................................................................................................................................................TTACGTATACTGAAGGTATACCG...............................................................................................................................................................................23124.0024070017
........................................................................................................................................................................................AGGATACATTCAGTATACGTA............................................................................................................................................21116.0016010204
...................................................................................................................................................TTACGTATACTGAAGGTATACCGGA.............................................................................................................................................................................25114.001419004
....................................................................................................................................................TACGTATACTGAAGGTAT...................................................................................................................................................................................18113.0013000013
......................................................................................................................................................CGTATACTGAAGGTATACCGGA.............................................................................................................................................................................22113.0013011011
....................................................................................................................................................TACGTATACTGAAGGTATAC.................................................................................................................................................................................20111.0011000011
................................................................................................................................TTGTTGGTGTTTCATCGTG......................................................................................................................................................................................................19110.0010010000
........................................................................................................................................................................................AGGATACATTCAGTATACGT.............................................................................................................................................2019.00932004
....................................................................................................................................................TACGTATACTGAAGGTATACCGG..............................................................................................................................................................................2319.00900009
....................................................................................................................................................TACGTATACTGAAGGTATA..................................................................................................................................................................................1919.00900009
........................................................................................................................................................................................AGGATACATTCAGTATACGTAT...........................................................................................................................................2216.00602004
........................................................................................................................................................................................AGGATACATTCAGTATACGTATA..........................................................................................................................................2313.00302001
....................................................................................................................................................TACGTATACTGAAGGTATACC................................................................................................................................................................................2112.00200002
..............................................................................................................................CGTTGTTGGTGTTTCATCGTG......................................................................................................................................................................................................2112.00202000
..................................................................................................................................................GTTACGTATACTGAAGGTATAC.................................................................................................................................................................................2212.00200002
.........................................................................................................................................................................................GGATACATTCAGTATACGTAT...........................................................................................................................................2112.00200002
.....................................................................................................................................................ACGTATACTGAAGGTATA..................................................................................................................................................................................1811.00100001
...................................................................................................................................................TTACGTATACTGAAGGTA....................................................................................................................................................................................1811.00101000
.....................................................................................................................................................ACGTATACTGAAGGTATAC.................................................................................................................................................................................1911.00100001
....................................................................................................................................................TACGTATACTGAAGGTATACCGGA.............................................................................................................................................................................2411.00100001
.................................................................................................................................................TGTTACGTATACTGAAGGTAT...................................................................................................................................................................................2111.00110000
..........................................................................................................................CCCGCGTTGTTGGTGTTTCATCGTG......................................................................................................................................................................................................2511.00110000
....................................................................................................................................................TACGTATACTGAAGGTATACCG...............................................................................................................................................................................2211.00100001
........................................................................................................................ATCCCGCGTTGTTGGTGTTTCATCGTG......................................................................................................................................................................................................2711.00101000
....................................................................................................................................................................................ACTCAGGATACATTCAGT...................................................................................................................................................1811.00110000
...........................................................................................................................................................................................ATACATTCAGTATACGTATACG........................................................................................................................................2211.00101000
droVir3
-------------ACAAAG----------------------------TGTT--TTG---------GTGTTT----T-A-----------TTTTAATGCAATCTAAATATAT--CA--CACATCCCGCGTCGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCT--------ACA-----------ATAAG----TG-CT----------------------------C--CGCTATA--------AACACCTCAGTTTTCATCGCACGCTCTTC---------SizeHit CountTotal NormTotalV116
Male-body		V053
Head		V047
Embryo		M027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis
...................................................................................................................................................TTACGTATACTGAAGGTAT...................................................................................................................................................................................1911123.0011237811111100012112513910000101110692642212521193190014800001120
...................................................................................................................................................TTACGTATACTGAAGGTATACC................................................................................................................................................................................221692.0069210110205540605040000413010328010211206237117040000049
...................................................................................................................................................TTACGTATACTGAAGGTATACCGG..............................................................................................................................................................................241633.006330000023201400000000000000008000001708658242050100024
...................................................................................................................................................TTACGTATACTGAAGGTATAC.................................................................................................................................................................................211529.0052920000201502010100003102103160002380722485020000032
...................................................................................................................................................TTACGTATACTGAAGGTATA..................................................................................................................................................................................201342.00342401006710723801500001101005110000054501862020000011
...................................................................................................................................................TTACGTATACTGAAGGTATACCG...............................................................................................................................................................................231306.0030610010132090101000001101020150000069401583070000143
........................................................................................................................................................................................AGGATACATTCAGTATACGT.............................................................................................................................................20190.009010000000110000000000000061000000152151707000006
........................................................................................................................................................................................AGGATACATTCAGTATACGTA............................................................................................................................................21181.00810000001010000000000000000100000162582402000003
...................................................................................................................................................TTACGTATACTGAAGGTATACCGGA.............................................................................................................................................................................25168.00681000020030000000000001000010000181751301000006
........................................................................................................................................................................................AGGATACATTCAGTATACGTAT...........................................................................................................................................22124.00240000000000000000000000000000000782601000000
........................................................................................................................................................................................AGGATACATTCAGTATACGTATA..........................................................................................................................................23123.00230000010000000000000000000000000960601000000
.........................................................................................................................................................................................GGATACATTCAGTATACGTATA..........................................................................................................................................22120.00200010052000000000000000000000000241401000000
....................................................................................................................................................TACGTATACTGAAGGTATAC.................................................................................................................................................................................20116.001600000150000000000000000000000000100000000000
......................................................................................................................................................CGTATACTGAAGGTATACCGGA.............................................................................................................................................................................22116.00160000010000100000000000000100000631300000000
....................................................................................................................................................TACGTATACTGAAGGTATACC................................................................................................................................................................................21115.001500000141000000000000000000000000000000000000
...................................................................................................................................................TTACGTATACTGAAGGTA....................................................................................................................................................................................1817.0070000000000101000000000020000000010101000000
.....................................................................................................................................................ACGTATACTGAAGGTATACCGG..............................................................................................................................................................................2217.0070000030000000000000000000000000111100000000
....................................................................................................................................................TACGTATACTGAAGGTAT...................................................................................................................................................................................1816.0060000060000000000000000000000000000000000000
.........................................................................................................................................................................................GGATACATTCAGTATACGTAT...........................................................................................................................................2115.0050000020000000000000000000000000021000000000
........................................................................................................................................................................................AGGATACATTCAGTATACG..............................................................................................................................................1914.0040100000000000000000000000000000100200000000
.....................................................................................................................................................ACGTATACTGAAGGTATACCGGA.............................................................................................................................................................................2313.0030000000000000000000000000000000110100000000
.................................................................................................................................CGCTGGTGTTTCCTCGTG......................................................................................................................................................................................................1813.0030000000000000000000000000000000020100000000
.........................................................................................................................................................ATACTGAAGGTATACCGG..............................................................................................................................................................................1813.0030000000010000000000000000000000010000000001
.................................................................................................................................................TGTTACGTATACTGAAGGTAT...................................................................................................................................................................................2113.0030000000020000000000000000000000000100000000
......................................................................................................................................................CGTATACTGAAGGTATACCGG..............................................................................................................................................................................2112.0020000010000000000000000000000000000001000000
....................................................................................................................................................TACGTATACTGAAGGTATA..................................................................................................................................................................................1912.0020000020000000000000000000000000000000000000
......................................................................................................TAAATATAT--CA--CACATCCCGC..........................................................................................................................................................................................................................2112.0020000000000000000000000000000000020000000000
..................................................................................................................................................GTTACGTATACTGAAGGTAT...................................................................................................................................................................................2012.0020000020000000000000000000000000000000000000
...............................................................................................................................GTCGCTGGTGTTTCCTCGTG......................................................................................................................................................................................................2012.0020010010000000000000000000000000000000000000
..........................................................................................................................................................................................GATACATTCAGTATACGTAT...........................................................................................................................................2012.0020000020000000000000000000000000000000000000
.......................................................................................................................................................................................CAGGATACATTCAGTATACGTA............................................................................................................................................2212.0020000000000000000000000000000000101000000000
......................................................................................................................................................................................TCAGGATACATTCAGTATACGTATA..........................................................................................................................................2512.0020000000000000000000000000000000001100000000
........................................................................................................................ATCCCGCGTCGCTGGTGTTTCCTCGTG......................................................................................................................................................................................................2712.0020000000010000000000000000000000000000000001
......................................................................................................................................................................................TCAGGATACATTCAGTATACGT.............................................................................................................................................2211.0010000000000000000000000000000000010000000000
...................................................................................................................................................TTACGTATACTGAAGGTATACCGGAT............................................................................................................................................................................2611.0010000000000000000000000000000000001000000000
....................................................................................................................................................TACGTATACTGAAGGTATACCG...............................................................................................................................................................................2211.0010000000000000000000000000000000010000000000
.........................................................................................................................................................................................GGATACATTCAGTATACGT.............................................................................................................................................1911.0010000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................ATAAG----TG-CT----------------------------C--CGCTATA--------AACA..................................2111.0010000000000000000000000000000000100000000000
.......................................................................................................................................................................................CAGGATACATTCAGTATACGTAT...........................................................................................................................................2311.0010000000000000000000000000000000100000000000
....................................................................................................................................................TACGTATACTGAAGGTATACCGG..............................................................................................................................................................................2311.0010000000000000000000000000000000000100000000
..................................................................................................................................................GTTACGTATACTGAAGGTATA..................................................................................................................................................................................2111.0010000010000000000000000000000000000000000000
.........................................................................................................................................................................................GGATACATTCAGTATACGTA............................................................................................................................................2011.0010000000000000000000000000000000100000000000
..............................................................................................................................CGTCGCTGGTGTTTCCTCGTG......................................................................................................................................................................................................2111.0010000000000000000000000000000000000100000000
..........................................................................................................................CCCGCGTCGCTGGTGTTTCCTCGTG......................................................................................................................................................................................................2511.0010000000000000000000000000000000000001000000
droMoj3
TA-----------TTGAAG-----------------------------------------------------------------------------------------T-T--TTCACACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCAACAATTCGC----------------------TC-CTGA----A------------AA---------------------------------------------------------------SizeHit CountTotal NormTotalV110
Male-body		V056
Head		V049
Head		V041
Embryo		M046
Female-body		M060
Embryo
...................................................................................................................................................TTACGTATACTGAAGGTATACC................................................................................................................................................................................221891.0089191011215655
...................................................................................................................................................TTACGTATACTGAAGGTAT...................................................................................................................................................................................191603.006034278601602
...................................................................................................................................................TTACGTATACTGAAGGTATAC.................................................................................................................................................................................211595.005959004465117
...................................................................................................................................................TTACGTATACTGAAGGTATA..................................................................................................................................................................................201147.001472200310715
...................................................................................................................................................TTACGTATACTGAAGGTATACCGG..............................................................................................................................................................................241104.0010441066627
.........................................................................................................................................................................................GGATACATTCAGTATACGTATA..........................................................................................................................................22192.00920000488
....................................................................................................................................................TACGTATACTGAAGGTATAC.................................................................................................................................................................................20154.00540000495
...................................................................................................................................................TTACGTATACTGAAGGTATACCG...............................................................................................................................................................................23133.00333101253
........................................................................................................................................................................................AGGATACATTCAGTATACGTATA..........................................................................................................................................23123.00230000122
....................................................................................................................................................TACGTATACTGAAGGTATACC................................................................................................................................................................................21116.00160000151
........................................................................................................................................................................................AGGATACATTCAGTATACGTA............................................................................................................................................21111.0011000209
....................................................................................................................................................TACGTATACTGAAGGTAT...................................................................................................................................................................................1818.008000080
....................................................................................................................................................TACGTATACTGAAGGTATA..................................................................................................................................................................................1918.008000080
...................................................................................................................................................TTACGTATACTGAAGGTATACCGGA.............................................................................................................................................................................2517.007200131
....................................................................................................................................................TACGTATACTGAAGGTATACCGG..............................................................................................................................................................................2315.005000050
......................................................................................................................................................CGTATACTGAAGGTATACCGGA.............................................................................................................................................................................2214.004000103
..............TGAAG-----------------------------------------------------------------------------------------T-T--TTCACACATCCCGC..........................................................................................................................................................................................................................2114.004000103
..........................................................................................................................................................................................GATACATTCAGTATACGTATAC.........................................................................................................................................2214.004000004
........................................................................................................................................................................................AGGATACATTCAGTATACGT.............................................................................................................................................2013.003200010
..........................................................................................................................................................................................GATACATTCAGTATACGTATA..........................................................................................................................................2112.002000011
.........................................................................................................................................................................................GGATACATTCAGTATACGTAT...........................................................................................................................................2112.002000020
........................................................................................................................................................................................AGGATACATTCAGTATACGTAT...........................................................................................................................................2212.002000020
...............................................................................................................................................CGTGTTACGTATACTGAAGGTATAC.................................................................................................................................................................................2511.001000010
....................................................................................................................................................................ATACCGGATAGGATACACTCAGGAT............................................................................................................................................................2511.001100000
...................................................................................................................................................TTACGTATACTGAAGGTA....................................................................................................................................................................................1811.001000010
.................................................................................................................................................TGTTACGTATACTGAAGGTAT...................................................................................................................................................................................2111.001100000
.......................................................................................................................................................GTATACTGAAGGTATACC................................................................................................................................................................................1811.001000001
.....................................................................................................................................................................................CTCAGGATACATTCAGTA..................................................................................................................................................1811.001100000
..........................................................................................................................................................................GATAGGATACACTCAGGATACATTCAGT...................................................................................................................................................2811.001100000
..................................................................................................................................................GTTACGTATACTGAAGGTATAC.................................................................................................................................................................................2211.001000010
.....................................................................................................................................................ACGTATACTGAAGGTATACCGG..............................................................................................................................................................................2211.001000010
..........................................................................................................................................................................GATAGGATACACTCAGGATAC..........................................................................................................................................................2111.001000010
..........................................................................................................................................................................................GATACATTCAGTATACGTAT...........................................................................................................................................2011.001000010
.........................................................................................................................................................................................GGATACATTCAGTATACGT.............................................................................................................................................1911.001000010
.....................................................................................................................................................ACGTATACTGAAGGTATA..................................................................................................................................................................................1811.001000010
..........................................................................................................................CCCGCGTTGCTGGTGTTTCCTCGTG......................................................................................................................................................................................................2511.001000001
...........................................................................................................................................................................ATAGGATACACTCAGGAT............................................................................................................................................................1811.001001000
....................................................................................................................................................TACGTATACTGAAGGTATACCG...............................................................................................................................................................................2211.001000010
.....................................................................................................................................................................................CTCAGGATACATTCAGTATACGTATA..........................................................................................................................................2611.001100000
droGri2
CA-----------ACAGAT----------------------------TGCTC-AAGTGTGACAAAGTGTTT----T---CAGTGTATTATT-TATCGAAATTTATATATATACAAAACACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGTTC-----------------TA---CAAGAGTGTCCT-TTGG----------------------AGTGT--CCC----------------------------------------CCCGGTGTAASizeHit CountTotal NormTotalV109
Male-body		M041
Female-body
...................................................................................................................................................TTACGTATACTGAAGGTAT...................................................................................................................................................................................19132.00321913
...................................................................................................................................................TTACGTATACTGAAGGTATA..................................................................................................................................................................................20118.0018117
...................................................................................................................................................TTACGTATACTGAAGGTATAC.................................................................................................................................................................................21115.0015015
...................................................................................................................................................TTACGTATACTGAAGGTATACC................................................................................................................................................................................2219.00909
...................................................................................................................................................TTACGTATACTGAAGGTATACCGG..............................................................................................................................................................................2414.00404
....................................................................................................................................................TACGTATACTGAAGGTATACC................................................................................................................................................................................2114.00404
....................................................................................................................................................TACGTATACTGAAGGTAT...................................................................................................................................................................................1813.00303
....................................................................................................................................................TACGTATACTGAAGGTATAC.................................................................................................................................................................................2012.00202
....................................................................................................................................................TACGTATACTGAAGGTATA..................................................................................................................................................................................1912.00202

Generated: 12/06/2013 at 02:40 PM