ID:

dsi-mir-iab-4

 Coordinate:

3R:8791217-8791284 -

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-35.1 -35.0 -34.6

Flybase annnotation

Antisense to intron [Dsim\GD20268-in]; pre_miRNA [Dsim\mir-iab-4-RM]; miRNA [Dsim\miR-iab-4-3p-RB]; miRNA [Dsim\miR-iab-4-5p-RA]

No Repeatable elements found

Sense Strand Reads

GACACGGCATAATTTTCAGCACTTTTGGATAATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGATAGCACGAGCAACGTGGGATGTGAAACACTTTTAATACACTTTAATAC
*****************************************(((((...(((((..((((((((((((.((((((.((..........)).)).)))).))))))))))))...)))))...)))))...************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
Ovary		 M025
embryo
 SRR553487
Ovary		 O001
Testis
 M053
Female-body		 GSM343915
embryo
 O002
Head
 SRR618934
Ovary		 SRR553485
Ovary		 M024
male body
 SRR553486
Ovary		 M023
head
........................................................ACGTATACTGAATGTATCCTGA.......................................................................................... 22 0 1 3627.00 3627 1303 871 822 137 140 130 103 34 38 19 24 6
........................................................ACGTATACTGAATGTATCCTG........................................................................................... 21 0 1 460.00 460 36 236 27 22 75 24 7 10 1 18 1 3
........................................................ACGTATACTGAATGTATCCTGG.......................................................................................... 22 1 1 205.00 205 0 199 0 0 0 0 0 0 0 3 0 3
........................................................ACGTATACTGAATGTATCC............................................................................................. 19 0 1 137.00 137 0 69 1 39 0 0 25 0 0 3 0 0
........................................................ACGTATACTGAATGTATCCT............................................................................................ 20 0 1 94.00 94 15 6 13 23 1 4 10 6 8 2 5 1
........................................................ACGTATACTGAATTTATCCTGA.......................................................................................... 22 1 1 43.00 43 3 36 4 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATC.............................................................................................. 18 0 1 32.00 32 0 16 0 4 0 0 5 6 0 1 0 0
........................................................ACGTATACTGAATGTATCCTGAA......................................................................................... 23 1 1 27.00 27 3 19 3 0 0 0 0 0 0 1 1 0
.........................................................CGTATACTGAATGTATCCTGA.......................................................................................... 21 0 1 20.00 20 7 0 3 0 10 0 0 0 0 0 0 0
........................................................ACGTATACTGAATTTATCCTG........................................................................................... 21 1 1 15.00 15 0 15 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCTGAT......................................................................................... 22 1 1 13.00 13 3 5 3 0 0 2 0 0 0 0 0 0
........................................................ACGTATACTGAATCTATCCTGA.......................................................................................... 22 1 1 12.00 12 0 12 0 0 0 0 0 0 0 0 0 0
.............................................................................................TATACCTTCAGTATACGTAACA..................................................... 22 0 1 12.00 12 7 0 2 0 0 3 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCTG........................................................................................... 20 0 1 11.00 11 1 1 0 0 8 0 0 0 0 1 0 0
..........................................................................................CGGTATACCTTCAGTATACGTAAC...................................................... 24 0 1 11.00 11 0 4 1 3 0 1 2 0 0 0 0 0
........................................................ACTTATACTGAATGTATCCTGA.......................................................................................... 22 1 1 10.00 10 2 4 3 0 1 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCTGAA......................................................................................... 22 1 1 10.00 10 2 4 4 0 0 0 0 0 0 0 0 0
..........................................................................................CGGTATACCTTCAGTATACGTA........................................................ 22 0 1 9.00 9 1 0 1 5 0 1 1 0 0 0 0 0
........................................................ACGTATACTGAATTTATCCTGG.......................................................................................... 22 2 1 8.00 8 0 8 0 0 0 0 0 0 0 0 0 0
.............................................................................................TATACCTTCAGTATACGTAAC...................................................... 21 0 1 7.00 7 0 4 1 0 1 1 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATTC............................................................................................. 19 1 1 7.00 7 0 7 0 0 0 0 0 0 0 0 0 0
................................................................TGAATGTATCCTGAGTA....................................................................................... 17 1 3 6.67 20 0 0 0 0 0 0 0 0 9 0 11 0
........................................................ACGTATACTGAATGTATCCTGAT......................................................................................... 23 1 1 6.00 6 1 3 0 0 1 0 0 0 1 0 0 0
..............................................................ACTGAATGTATCCTGA.......................................................................................... 16 0 1 5.00 5 1 0 1 0 0 0 0 3 0 0 0 0
..........................................................................................CGGTATACCTTCAGTATACGTAA....................................................... 23 0 1 5.00 5 2 0 1 0 0 1 0 1 0 0 0 0
......................................................AAACGTATACTGAATGTATCCT............................................................................................ 22 0 1 5.00 5 1 1 0 0 1 2 0 0 0 0 0 0
..........................................................................................CGGTATACCTTCAGTATACG.......................................................... 20 0 1 5.00 5 0 0 0 3 1 0 1 0 0 0 0 0
..........................................................................................CGGTATACCTTCAGTATACGT......................................................... 21 0 1 5.00 5 0 0 0 0 0 0 0 5 0 0 0 0
........................................................ACGTATACTGAATGTATCCTTA.......................................................................................... 22 1 1 4.00 4 1 0 0 0 2 1 0 0 0 0 0 0
........................................................ACGTATACTGAATTTATCCT............................................................................................ 20 1 1 4.00 4 0 3 0 0 0 0 0 0 0 0 1 0
........................................................ACGTATACTGAATTTATCC............................................................................................. 19 1 1 4.00 4 0 4 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATCTATCC............................................................................................. 19 1 1 4.00 4 0 4 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGCATGTATCCTGA.......................................................................................... 22 1 1 4.00 4 0 0 3 0 1 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCGG........................................................................................... 21 1 1 4.00 4 0 4 0 0 0 0 0 0 0 0 0 0
............................................................ATACTGAATGTATCCTGA.......................................................................................... 18 0 1 4.00 4 0 0 0 0 0 0 0 4 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGC.......................................................................................... 22 1 1 4.00 4 3 0 1 0 0 0 0 0 0 0 0 0
................................................................TGAATGTATCCTGAGT........................................................................................ 16 0 3 3.33 10 0 0 0 0 0 0 0 0 5 0 5 0
........................................................ACGTATACTGATTGTATCCTGA.......................................................................................... 22 1 1 3.00 3 1 0 1 0 1 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCCGA.......................................................................................... 22 1 1 3.00 3 1 1 0 0 1 0 0 0 0 0 0 0
........................................................ATGTATACTGAATGTATCCTGA.......................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCTGAC......................................................................................... 22 1 1 3.00 3 0 1 0 0 1 1 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGT.......................................................................................... 22 1 1 3.00 3 1 0 0 0 0 1 0 1 0 0 0 0
..........................................................................................CGGTATACCTTCAGTATA............................................................ 18 0 1 3.00 3 0 0 0 1 0 0 2 0 0 0 0 0
........................................................ACGTATACTGAATCTATCCTG........................................................................................... 21 1 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAG......................................................................................... 23 0 1 3.00 3 0 0 0 2 0 0 1 0 0 0 0 0
........................................................ACGTATACTGAATGT................................................................................................. 15 0 1 3.00 3 0 0 0 0 0 0 0 3 0 0 0 0
..........................................................................................CGGTATACCTTCAGTATAC........................................................... 19 0 1 3.00 3 0 1 0 1 1 0 0 0 0 0 0 0
......................................................AAACGTATACTGAATGTATCCTG........................................................................................... 23 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTAACCTGA.......................................................................................... 22 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAAAGT...................................................................................... 26 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATTCTGA.......................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGCATCCTGA.......................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
...................................................CGTGGACGTATACTGAATGTATCCTGA.......................................................................................... 27 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTAAATGTATCCTGA.......................................................................................... 22 1 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................ATACCTTCAGTATACGT......................................................... 17 0 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0
...........................................................................................GGTATACCTTCAGTATACG.......................................................... 19 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTCA.......................................................................................... 22 1 1 2.00 2 0 0 0 0 1 1 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCCG........................................................................................... 21 1 1 2.00 2 0 1 0 0 0 1 0 0 0 0 0 0
..........................................................GTATACTGAATGTATCCTGA.......................................................................................... 20 0 1 2.00 2 0 0 0 0 1 1 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCGA........................................................................................... 21 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TATACCTTCAGTATACGTAACT..................................................... 22 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................CACGTATACTGAATGTATCCTG........................................................................................... 22 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGACTGTATCCTGA.......................................................................................... 22 1 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAAC........................................................................................ 24 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACCGAATGTATCCTGA.......................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCTGACT........................................................................................ 23 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAAA........................................................................................ 24 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGGATCCTGA.......................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCT............................................................................................ 19 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATACTGA.......................................................................................... 22 1 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................AACGTATACTGAATGTATCCTG........................................................................................... 22 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCTGAAA........................................................................................ 23 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTACCCTGA.......................................................................................... 22 1 1 2.00 2 0 0 1 0 0 1 0 0 0 0 0 0
...................................................CGTGGACGTATACTGAATGTATCCTG........................................................................................... 26 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.................................................................GAATGTATCCTGAGT........................................................................................ 15 0 3 1.67 5 0 0 0 0 0 0 0 0 2 0 3 0
................................................................TGAATGTATCCTGAG......................................................................................... 15 0 3 1.67 5 0 0 0 0 0 0 0 0 3 0 2 0
........................................................ACGTATTCTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCTGATT........................................................................................ 23 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................CGTATACTGAATTTATCCTGAAA........................................................................................ 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................GCGTATACTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTAAATGTATCCTGAC......................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATAATGAATGTATCCTGA.......................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................ACGTACACTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................ACGTATATTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................ACATACTGAATGTATCCTGA.......................................................................................... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
........................................................ACGTATACTGAATGGATCCTGC.......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................ACGTATCCTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................ACGTATACTTAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGGATGTCTCCTGA.......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................CGTATACTGAATTTATCCTGAA......................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................ACGTTTACTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGCATGTATCCT............................................................................................ 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................ACATATACTGAATGTATCCTGG.......................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATAATGAATGTTTCCTGA.......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCTTGA.......................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATATATCCTTA.......................................................................................... 21 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCTGGT......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
........................................................ACGTATACTGAATATATCCTG........................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................ACTTATACTGAATGTATCCTG........................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................ACGTATACTCAATGTATCCTCA.......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCGTGA.......................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................ACGTATACTGCATGTATCCTGT.......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAGGCT...................................................................................... 26 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................TACCTTCAGTATACGTA........................................................ 17 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
........................................................ACGTATACTGAATGTATCCTA........................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................ACTTATACTGAATGTATCCTC........................................................................................... 21 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................ACGGATACTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
.........................................................CGTATACTGAATGTATCC............................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
........................................................ACGTATACTGAATGTA................................................................................................ 16 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
........................................................ACGGATACTGAATGTATACTGA.......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................TATACTGAATGTATCCTGATA........................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................CGGCATACCTTCAGTATACGTAAC...................................................... 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................ACGTATAATGAATGTATCATGA.......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................ACGGATACTGAATGTATCCTG........................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCTGG.......................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................CGGTATACCTTCAGT............................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGGATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAACGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGGATGTATCCTGG.......................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGAATCCTGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATGCTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
........................................................ACGTATACTGAATGTATCATGA.......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTGTCCTGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTTTCCTGA.......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAACGTATCCTG........................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................ACGTATACTCAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................AAACGTATACTGAATCTATCCT............................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATTTACCCTGA.......................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAGT........................................................................................ 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATTCTG........................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAC......................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................CAGACGTATACTGAATGTATCCTGA.......................................................................................... 25 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................ATACCTTCAGTATACGTAACA..................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................AAACGTACACTGAATGTATCCT............................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAGGCG...................................................................................... 26 3 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
........................................................ACGTATACTGAAATTATCCTGA.......................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................GGTATACCTTCAGTATACGTA........................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................CGGTATACCTTCAGTATCCGTAA....................................................... 23 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATGCTGA.......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATTTATCCTGT.......................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................AGGTATACTGAATGTATCCTGG.......................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTTTACTG........................................................................................... 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGACA........................................................................................ 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................ACCTATACTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................TATACTGAATGTATCCTGAAA........................................................................................ 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................ACGTATACTGAATTTATCCGG........................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCTTA.......................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................ATACCTTCAGTATACGTAA....................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................CGTATACTGAATTTATCC............................................................................................. 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................TATACTGAATGTATCCTG........................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
........................................................ACGTATACTGAATGAATCCTGG.......................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATACTGAATGTATCCTGAAT........................................................................................ 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGAATGTATCCGTA.......................................................................................... 21 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................ACGTATACTGAACTTATCCTGA.......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................ACGTATAATGAATGTATCCTG........................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................AAGTATACTGAATGTATACTGA.......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................ACGTATAATGAATGTCTCCTGC.......................................................................................... 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................ACATATACTGAATGTATCCTGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................CGTATACTGACTGTCTCCTGAG......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................AATGTATCCTGAGTA....................................................................................... 15 1 10 0.90 9 0 0 0 0 0 0 0 0 3 0 6 0
.................................................................GAATGTATCCTGAGTA....................................................................................... 16 1 4 0.50 2 0 0 0 0 0 0 0 0 0 0 2 0
..............................................................ACTGAATGTATCCTG........................................................................................... 15 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0
........................................................ACGTATACTGTATGTATCCTTG.......................................................................................... 22 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................ACCTATACTGAATGTATTC............................................................................................. 19 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
................CAGCACTTTTGGAAAACGGC.................................................................................................................................... 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1
........................................................ACGCATACTGGATGTATCCTGC.......................................................................................... 22 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................TATACTGAATGTCTCCTGACTT....................................................................................... 22 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................TATACTGAATGTATCCTGAAAA....................................................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................TTGAATGTATCCTGA.......................................................................................... 15 1 15 0.47 7 0 0 0 0 0 0 0 0 2 0 5 0
..........................................................ACGTACTGAATGTATCCTGA.......................................................................................... 20 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................TCTTGAATGTATCCTGAGTA....................................................................................... 20 3 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0
........................................................GCGTATACTGAATGTATC.............................................................................................. 18 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................TGAGTGTATCCTGAGT........................................................................................ 16 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0
...............................................................CTTAATGTATCCTGA.......................................................................................... 15 1 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0
................................................................TGAATGTATCCTTAGT........................................................................................ 16 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0
................................................................TTAATGTATCCTGAGT........................................................................................ 16 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0
...............................................................TTGAATGTATCCTGAGTA....................................................................................... 18 2 7 0.14 1 0 0 0 0 0 0 0 0 1 0 0 0
................................................................TGAATGTACCCTGAGTA....................................................................................... 17 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................GAATGTATCCTGAGTAC...................................................................................... 17 2 13 0.08 1 0 0 0 0 0 0 0 0 0 0 1 0
................................................................TGAATGTATCTTGAG......................................................................................... 15 1 18 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................TCTTGAATGTATCCTGA.......................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0
....................AATTTTGGATAATGG..................................................................................................................................... 15 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................GAATGTACCCTGAGTA....................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

GTATTAAAGTGTATTAAAAGTGTTTCACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCATTATCCAAAAGTGCTGAAAATTATGCCGTGTC
**************************************...(((((...(((((...((((((((((((.((((.((.((..........)).)))))).))))))))))))..)))))...)))))***************************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 M053
Female-body		 GSM343915
embryo
 SRR553488
Ovary		 M024
male body
 SRR553487
Ovary		 M025
embryo
 O002
Head
 SRR618934
Ovary		 SRR553486
Ovary		 SRR553485
Ovary		 M023
head
.............................................................................................GGATACATTCAGTATACGTTTACG................................................... 24 0 1 196.00 196 194 0 0 0 0 0 0 2 0 0 0 0
............................................................................................AGGATACATTCAGTATACGTTTACG................................................... 25 0 1 142.00 142 142 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AGGATACATTCAGTATACGTTT...................................................... 22 0 1 109.00 109 107 1 0 0 0 0 0 1 0 0 0 0
.......................................................TTACGTATACTGAAGGTA............................................................................................... 18 0 1 106.00 106 99 0 0 0 0 0 0 6 0 1 0 0
.......................................................TTACGTATACTGAAGGTATACCGG......................................................................................... 24 0 1 105.00 105 26 10 3 39 0 22 0 1 3 0 1 0
.......................................................TTACGTATACTGAAGGTAT.............................................................................................. 19 0 1 105.00 105 61 3 3 1 24 1 1 0 2 5 3 1
.......................................................TTACGTATACTGAAGGTATA............................................................................................. 20 0 1 103.00 103 84 8 5 0 2 0 2 2 0 0 0 0
.......................................................TTACGTATACTGAAGGTATACC........................................................................................... 22 0 1 73.00 73 4 24 27 2 7 4 5 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTATAC............................................................................................ 21 0 1 48.00 48 5 30 6 1 4 0 0 0 1 0 1 0
............................................................................................AGGATACATTCAGTATAC.......................................................... 18 0 1 38.00 38 38 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AGGATACATTCAGTATACG......................................................... 19 0 1 34.00 34 33 0 0 0 0 0 0 1 0 0 0 0
.......................................................TTACGTATACTGAAGGTATACCGGA........................................................................................ 25 0 1 26.00 26 6 1 4 5 2 2 5 0 1 0 0 0
............................................................................................AGGATACATTCAGTATACGT........................................................ 20 0 1 20.00 20 20 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................GGATACATTCAGTATACGTTT...................................................... 21 0 1 19.00 19 18 0 0 0 0 0 0 1 0 0 0 0
.......................................................TTACGTATACTGAAGGTATACCG.......................................................................................... 23 0 1 18.00 18 14 1 0 0 0 0 2 0 1 0 0 0
.............................................................................................GGATACATTCAGTATACG......................................................... 18 0 1 15.00 15 15 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................GGATACATTCAGTATACGT........................................................ 19 0 1 11.00 11 11 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................GGATACATTCAGTATACGTT....................................................... 20 0 1 11.00 11 11 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AGGATACATTCAGTATACGTT....................................................... 21 0 1 9.00 9 9 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTATACCGGT........................................................................................ 25 1 1 8.00 8 0 0 0 2 1 2 0 0 1 0 2 0
........................................................TACGTATACTGAAGGTAT.............................................................................................. 18 0 1 8.00 8 6 1 0 0 0 0 0 1 0 0 0 0
.............................................................................................GGATACATTCAGTATACGTTTA..................................................... 22 0 1 7.00 7 5 0 2 0 0 0 0 0 0 0 0 0
........................................................TACGTATACTGAAGGTATACCGG......................................................................................... 23 0 1 7.00 7 4 1 0 1 0 0 0 0 1 0 0 0
........................................................TACGTATACTGAAGGTATACCG.......................................................................................... 22 0 1 6.00 6 4 2 0 0 0 0 0 0 0 0 0 0
....................................TTGCTCGTGCTATCTCGTG................................................................................................................. 19 0 1 6.00 6 0 0 2 0 0 0 3 0 1 0 0 0
........................................................TACGTATACTGAAGGTATACCGGA........................................................................................ 24 0 1 5.00 5 2 0 0 1 1 0 0 0 0 1 0 0
.............................................................................................GGATACATTCAGTATACGTTTAC.................................................... 23 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTATACCGT......................................................................................... 24 1 1 3.00 3 0 1 0 0 0 0 0 0 2 0 0 0
........................................................TACGTATACTGAAGGTATACC........................................................................................... 21 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0
..............................................................................................GATACATTCAGTATACGTTTAA.................................................... 22 1 1 3.00 3 0 1 0 2 0 0 0 0 0 0 0 0
...................................GTTGCTCGTGCTATCTCGTG................................................................................................................. 20 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0
........................................................TACGTATACTGAAGGTATAC............................................................................................ 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTATACCGGAT....................................................................................... 26 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTATACCGGG........................................................................................ 25 1 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0
.......................................................TTACGTATACTGAAGGGATACCGG......................................................................................... 24 1 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0
........................................................TACGTATACTGAAGGTATA............................................................................................. 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTATACCA.......................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................TTACGTATACTGAATGTATA............................................................................................. 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGGATACCGGA........................................................................................ 25 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTATACCGGC........................................................................................ 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................TTAAGTATACTGAAGGTATACC........................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGGAGGTATACC........................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................GATACATTCAGTATACGTTTA..................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAGGGTAT.............................................................................................. 19 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................TTACGTATACTTAAGGTATACCGG......................................................................................... 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................GATAGGATACACTCAGGATACATTCA................................................................ 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................CATTCAGTATACGTTTACG................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................GTTACGTATACTGAAGGTATACCGGA........................................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTATAAC........................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................CTTACGTATACTGAAGGTAT.............................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTATT............................................................................................. 20 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTATACT........................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................TACGTATACTGAAGGTATACCGGAT....................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................TAGGATACACTCAGGATACATTCAGT.............................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTAAAGGTATAC............................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................ATACTGAAGGTATACCGG......................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................TTACGTATACTGAAGGT................................................................................................ 17 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
...............................................................................................ATACATTCAGTATACGTTTAT.................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGGATTCC........................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................CGTTGCTCGTGCTATCTCGTG................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTATAA............................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................AGGATACATTCAGTATACGTTTAC.................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGGATAC............................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGTAC.............................................................................................. 19 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................GATACATTCAGTATACGT........................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AGGATACATTCAGTATACGTTTA..................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................TTACGTACACCGAAGGTATACCA.......................................................................................... 23 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGACGGTCTA............................................................................................. 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAGGAAT.............................................................................................. 19 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................TTACGTATACTGAAAGCGTA............................................................................................. 20 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................GGTATACCGGTAAGGA................................................................................... 16 2 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 3R:8791167-8791334 - dsi-mir-iab-4 GACACGGCATAATT-TTCAG-CAC-TTTT---GGATA--ATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGATAGCACGAGCAACGTGGGATGTG---------------------AA---ACACTTTT-AATACAC----------------------------------------TTTAATA--------C
droSec2 scaffold_12:1472194-1472362 - dse-mir-iab-4 GACACGGCATAATT-TTCAG-CAC-TTTT---GGATA--ATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGATAGCACGAGCAACGTGGGATGTG---------------------AA---ACACTTTTTAATACAT----------------------------------------CTTAATA--------C
dm3 chr3R:12681947-12682115 + dme-mir-iab-4 GACGACGCATAATT-TTCAG-CAC-TTTT---GAATA--ATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAGAGCACTAACAACGTGGGATGTG---------------------AA---ACACTTTTTAAGACAC----------------------------------------CTTAATA--------C
droEre2 scaffold_4770:8952366-8952534 - der-mir-iab-4 GACGACGTATAATT-TTCAG-CAC-TTTT---GGATT--AAGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAAAGCACGAGCAACGTGGGATGTG---------------------AA---ACACTTTTTAAGACTC----------------------------------------TACAATA--------C
droYak3 3R:11708917-11709085 - dya-mir-iab-4 GACGACGCGTAATT-TTCAG-CAC-TTTT---GGACT--AAGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAAAGCACGAGCAACGTGGGATGTG---------------------AA---ACACTTTTTAATACTG----------------------------------------CTTAATA--------C
droEug1 scf7180000409804:92878-93035 + A------CTTCATT-TTGGT-CAC-TTTC---GGATT--ATAGTGATTGTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGTGGGATGTG---------------------AA---ACAGTTTA-------CT-T----------------------------TAA---------AAAC--------C
droBia1 scf7180000299102:622743-622906 + AGCGGCGCATCTTT-CTCGG-CAC-TTTT---GGATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG---------------------AA---ACACTTTA-------TT-T----------------------------TTG---------AAAA--------C
droTak1 scf7180000411269:86541-86713 + AGCGGCGCATCCTTCTTTGG-CAC-TTTT---GGATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGTGGGATGTG---------------------AA---ACACTTTT-------CT-T----------------------------TTT---------AAAACTCGACGAA
droEle1 scf7180000486474:1729419-1729567 + GT-------------------CAC-TTTC---GGATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG---------------------AA---ACACTTTA-------CT-T----------------------------TAAA--------AATA--------T
droRho1 scf7180000759657:23955-24125 + AGCGACGCATCCTG-TTTGG-CAC-TTTC---GGATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG---------------------AA---ACACTTTA-------CT-G----------------------------TTAAAACTGTTGA--A--------T
droFic1 scf7180000452523:122324-122489 + AGCGACACGTC--T-TTCAGTCAC-TTTCGCCGGATTTCATAGTGATTGTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG---------------------AA---ACACTTTT-------C----------------------------------------CTTAAAA--------C
droKik1 scf7180000302313:151140-151299 + TTT-TCGTGTCCTTTATAAG-CAC-TTGC---GGATG--ATGATGACTCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACAAGCAACGCGGGATGTG---------------------AA---ACACTTGAAA-------------------------------------------------AAAA--------T
droAna3 scaffold_13340:7215149-7215302 - dan-mir-iab-4 A----------------------CATTAC---GGAGG--ATGGTGATTTTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGTAACACCTTCAACGCGGGACGTG---------------------AA---A-ACTTAA---TATTC--------------------------------TGA--------AAT-ATTTAAAAC
droBip1 scf7180000396708:1638832-1639003 + AGCACTACTATCTT-ACCAG-AAAATTAC---GATGG--ATGGTGATTTTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACTTTCAACGCGGGACGTG---------------------AA---A-ACTTTG-------TT-T----------------------------TAGA--------AAT-ATTTCAAAC
dp5 2:17671733-17671899 + dps-mir-iab-4 -------------T-TTCAG-CGG-TTAT---G---T--AGGATGAACCTGTGCGACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATACGT-------------------CGA---ACTG--------------------AAACCGAGCACTGTGATTTATTCTTGC-----AC---TT--------T
droPer2 scaffold_0:11526539-11526705 + dpe-mir-iab-4 -------------T-TTCAG-CGG-TTAT---G---T--AGGATGAACCTGTGCGACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATATGT-------------------CGA---ACTGAATTTAA-A--C--GTGTAA--ACCGAGCAC---------------------TGTGATT--------T
droWil2 scf2_1100000004943:4905554-4905684 - dwi-mir-iab-4 -----------------------------------------GATGAATCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATGCTATCCGGTATACCTTCAGTATACGTAACACGATGAAACACCAACAACGCGGGATGTGT-------------------GAA---ACACTTTTTAT-T--C--------------------------------------------TTT--------T
droVir3 scaffold_12855:414656-414794 - dvi-mir-iab-4 TA-------------------------------------TTGTAGAGCCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCGACGCGGGATGTG---------------------TG---ATATATTT-AGATTGC----------------------------------------ATTAAAA--------T
droMoj3 scaffold_6540:1943726-1943850 + dmo-mir-iab-4 ----------------------------------------TGTTGAGCCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATGTGT-------------------GAA---A-ACTTC--AATA-----------------------------------------------------------
droGri2 scaffold_14906:12815095-12815263 + dgr-mir-iab-4 ---------------------CAC-TCTT---G---------TAGAACCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATGTGTTTTGTATATATATAAATTTCGATAAATAATACA-------CTG------AA----AACAC---------------------TTTGTCA--------C

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
GACACGGCATAATT-TTCAG-CAC-TTTT---GGATA--ATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGATAGCACGAGCAACGTGGGATGTG---------------------AA---ACACTTTT-AATACAC----------------------------------------TTTAATA--------CSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
................................................................ACGTATACTGAATGTATCCTGA...................................................................................................................................................................2213627.0036271306198711371031403824822130334
................................................................ACGTATACTGAATGTATCCTG....................................................................................................................................................................211460.00460243182362277511273610
................................................................ACGTATACTGAATGTATCC......................................................................................................................................................................191137.00137003693925000100
................................................................ACGTATACTGAATGTATCCT.....................................................................................................................................................................20194.00944126231018513156
................................................................ACGTATACTGAATGTATC.......................................................................................................................................................................18132.00320011645000006
.................................................................CGTATACTGAATGTATCCTGA...................................................................................................................................................................21120.00200000001000370
.....................................................................................................TATACCTTCAGTATACGTAACA..............................................................................................................................22112.0012300000000270
.................................................................CGTATACTGAATGTATCCTG....................................................................................................................................................................20111.0011001100800010
..................................................................................................CGGTATACCTTCAGTATACGTAAC...............................................................................................................................24111.0011100432000100
..................................................................................................CGGTATACCTTCAGTATACGTA.................................................................................................................................2219.009100051000110
.....................................................................................................TATACCTTCAGTATACGTAAC...............................................................................................................................2117.007100400100100
......................................................................ACTGAATGTATCCTGA...................................................................................................................................................................1615.005000000000113
..................................................................................................CGGTATACCTTCAGTATACGTAA................................................................................................................................2315.005100000000121
..............................................................AAACGTATACTGAATGTATCCT.....................................................................................................................................................................2215.005200100100010
..................................................................................................CGGTATACCTTCAGTATACG...................................................................................................................................2015.005000031100000
..................................................................................................CGGTATACCTTCAGTATACGT..................................................................................................................................2115.005000000000005
....................................................................ATACTGAATGTATCCTGA...................................................................................................................................................................1814.004000000000004
........................................................................TGAATGTATCCTGAGT.................................................................................................................................................................1633.3310000000055000
..................................................................................................CGGTATACCTTCAGTATA.....................................................................................................................................1813.003000012000000
................................................................ACGTATACTGAATGTATCCTGAG..................................................................................................................................................................2313.003000021000000
................................................................ACGTATACTGAATGT..........................................................................................................................................................................1513.003000000000003
..................................................................................................CGGTATACCTTCAGTATAC....................................................................................................................................1913.003000110100000
..............................................................AAACGTATACTGAATGTATCCTG....................................................................................................................................................................2313.003000300000000
......................................................................................................ATACCTTCAGTATACGT..................................................................................................................................1712.002000000000002
...................................................................................................GGTATACCTTCAGTATACG...................................................................................................................................1912.002000020000000
..................................................................GTATACTGAATGTATCCTGA...................................................................................................................................................................2012.002100000100000
.................................................................CGTATACTGAATGTATCCT.....................................................................................................................................................................1912.002000020000000
...............................................................AACGTATACTGAATGTATCCTG....................................................................................................................................................................2212.002000200000000
.........................................................................GAATGTATCCTGAGT.................................................................................................................................................................1531.675000000023000
........................................................................TGAATGTATCCTGAG..................................................................................................................................................................1531.675000000032000
.......................................................................................................TACCTTCAGTATACGTA.................................................................................................................................1711.001000000000001
.................................................................CGTATACTGAATGTATCC......................................................................................................................................................................1811.001000001000000
................................................................ACGTATACTGAATGTA.........................................................................................................................................................................1611.001000000000001
..................................................................................................CGGTATACCTTCAGT........................................................................................................................................1511.001000000000010
................................................................ACGTATACTGAATGTATCCTGAGT.................................................................................................................................................................2411.001000000100000
......................................................................................................ATACCTTCAGTATACGTAACA..............................................................................................................................2111.001000000000100
...................................................................................................GGTATACCTTCAGTATACGTA.................................................................................................................................2111.001000000100000
......................................................................................................ATACCTTCAGTATACGTAA................................................................................................................................1911.001000000000001
...................................................................TATACTGAATGTATCCTG....................................................................................................................................................................1811.001000000000001
......................................................................ACTGAATGTATCCTG....................................................................................................................................................................1520.501000000000001
droSec2
GACACGGCATAATT-TTCAG-CAC-TTTT---GGATA--ATGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGATAGCACGAGCAACGTGGGATGTG---------------------AA---ACACTTTTTAATACAT----------------------------------------CTTAATA--------CSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
................................................................ACGTATACTGAATGTATCCTGA...................................................................................................................................................................221859.0085934771378
................................................................ACGTATACTGAATGTATCCTG....................................................................................................................................................................211247.002471230223
.................................................................CGTATACTGAATGTATCCTGA...................................................................................................................................................................21157.005705052
................................................................ACGTATACTGAATGTATCCT.....................................................................................................................................................................20123.002316016
.................................................................CGTATACTGAATGTATCCTG....................................................................................................................................................................20122.002200022
..................................................................................................CGGTATACCTTCAGTATACGTA.................................................................................................................................2218.0080107
................................................................ACGTATACTGAATGTATCC......................................................................................................................................................................1916.0060303
..................................................................................................CGGTATACCTTCAGTATACGT..................................................................................................................................2115.0050500
..................................................................................................CGGTATACCTTCAGTATACG...................................................................................................................................2015.0050104
.....................................................................................................TATACCTTCAGTATACGTAACA..............................................................................................................................2214.0041201
.....................................................................................................TATACCTTCAGTATACGTAAC...............................................................................................................................2114.0040103
................................................................ACGTATACTGAATGTATC.......................................................................................................................................................................1813.0030300
.................................................................CGTATACTGAATGTATCCT.....................................................................................................................................................................1912.0020002
..................................................................................................CGGTATACCTTCAGTATACGTAAC...............................................................................................................................2412.0020101
..............................................................AAACGTATACTGAATGTATCCT.....................................................................................................................................................................2212.0020200
..................................................................GTATACTGAATGTATCCTGA...................................................................................................................................................................2012.0020101
..................................................................GTATACTGAATGTATCCTG....................................................................................................................................................................1911.0010001
.................................................................CGTATACTGAATGTATCCTGAGT.................................................................................................................................................................2311.0010100
.................................................................................................................................AGCACGAGCAACGTGGGATGTG---------------------.............................................................................2211.0010100
................................................................ACGTATACTGAATGTATCCTGAG..................................................................................................................................................................2311.0010100
.................................................................CGTATACTGAATGTATCCTGAG..................................................................................................................................................................2211.0010100
...................................................................TATACTGAATGTATCCTGA...................................................................................................................................................................1911.0010100
...................................................................................................GGTATACCTTCAGTATACGTA.................................................................................................................................2111.0010001
...............................................................AACGTATACTGAATGTATCCTG....................................................................................................................................................................2211.0010001
..................................................GTGCGACCTCGTAAACGTA....................................................................................................................................................................................1911.0010100
....................................................................ATACTGAATGTATCCTGA...................................................................................................................................................................1811.0010100
......................................................................................................ATACCTTCAGTATACGTAACA..............................................................................................................................2111.0010100
..................................................................................................CGGTATACCTTCAGTATACGTAA................................................................................................................................2311.0010001
droEre2
GACGACGTATAATT-TTCAG-CAC-TTTT---GGATT--AAGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAAAGCACGAGCAACGTGGGATGTG---------------------AA---ACACTTTTTAAGACTC----------------------------------------TACAATA--------CSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
................................................................ACGTATACTGAATGTATCCTGA...................................................................................................................................................................2211839.001839770521431324
................................................................ACGTATACTGAATGTATCCTG....................................................................................................................................................................211645.00645803161815
.................................................................CGTATACTGAATGTATCCTGA...................................................................................................................................................................211144.0014410001358
.................................................................CGTATACTGAATGTATCCTG....................................................................................................................................................................20156.00560000560
................................................................ACGTATACTGAATGTATCC......................................................................................................................................................................19134.00340010231
................................................................ACGTATACTGAATGTATCCT.....................................................................................................................................................................20131.00312011234
..............................................................AAACGTATACTGAATGTATCCT.....................................................................................................................................................................22115.00152000211
.....................................................................................................TATACCTTCAGTATACGTAACA..............................................................................................................................22110.0010200035
.....................................................................................................TATACCTTCAGTATACGTAAC...............................................................................................................................2118.008000008
.....................................................................................................TATACCTTCAGTATACGTAACAC.............................................................................................................................2318.008000008
..................................................................GTATACTGAATGTATCCTGA...................................................................................................................................................................2018.008000080
..................................................................................................CGGTATACCTTCAGTATACG...................................................................................................................................2015.005000050
..................................................................................................CGGTATACCTTCAGTATACGTA.................................................................................................................................2214.004000040
..................................................................GTATACTGAATGTATCCTG....................................................................................................................................................................1913.003000030
....................................................................ATACTGAATGTATCCTGA...................................................................................................................................................................1812.002000011
.................................................................CGTATACTGAATGTATCCT.....................................................................................................................................................................1912.002000020
..............................................................AAACGTATACTGAATGTATCC......................................................................................................................................................................2112.002000002
...................................................................................................GGTATACCTTCAGTATACG...................................................................................................................................1912.002000020
................................................................ACGTATACTGAATGTATC.......................................................................................................................................................................1812.002000002
......................................................................................................ATACCTTCAGTATACGTAACAC.............................................................................................................................2212.002000002
...................................................................TATACTGAATGTATCCTGA...................................................................................................................................................................1912.002000020
..................................................................................................CGGTATACCTTCAGTATACGTAAC...............................................................................................................................2412.002000002
.................................................................................................CCGGTATACCTTCAGTATACGTAAC...............................................................................................................................2511.001000001
.............................................................TAAACGTATACTGAATGTATCC......................................................................................................................................................................2211.001000001
......................................................................................................ATACCTTCAGTATACGTAAC...............................................................................................................................2011.001000010
.......................................................................................................TACCTTCAGTATACGTAAC...............................................................................................................................1911.001000001
..................................................................................................CGGTATACCTTCAGTATACGT..................................................................................................................................2111.001100000
.................................................................CGTATACTGAATGTATCCTGAG..................................................................................................................................................................2211.001000010
........................................................................................................ACCTTCAGTATACGTAACA..............................................................................................................................1911.001000001
..................................................................................................CGGTATACCTTCAGTATA.....................................................................................................................................1811.001001000
...................................................................TATACTGAATGTATCCTG....................................................................................................................................................................1811.001000010
................................................................ACGTATACTGAATGTATCCTGAG..................................................................................................................................................................2311.001000010
..............................................................AAACGTATACTGAATGTATCCTGA...................................................................................................................................................................2411.001000010
.................................................................CGTATACTGAATGTATCC......................................................................................................................................................................1811.001000001
droYak3
GACGACGCGTAATT-TTCAG-CAC-TTTT---GGACT--AAGGCGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGAAAGCACGAGCAACGTGGGATGTG---------------------AA---ACACTTTTTAATACTG----------------------------------------CTTAATA--------CSizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
................................................................ACGTATACTGAATGTATCCTGA...................................................................................................................................................................2214335.00433513000022823921
................................................................ACGTATACTGAATGTATCC......................................................................................................................................................................191495.00495000002493
................................................................ACGTATACTGAATGTATCCTG....................................................................................................................................................................211409.00409130010287108
..............................................................AAACGTATACTGAATGTATCCT.....................................................................................................................................................................22195.009510000094
.................................................................CGTATACTGAATGTATCCTGA...................................................................................................................................................................21179.0079100004434
.....................................................................................................TATACCTTCAGTATACGTAACAC.............................................................................................................................23165.006500000065
................................................................ACGTATACTGAATGTATCCT.....................................................................................................................................................................20162.0062200002238
................................................................ACGTATACTGAATGTATC.......................................................................................................................................................................18146.004610000045
.....................................................................................................TATACCTTCAGTATACGTAAC...............................................................................................................................21135.003510000034
.................................................................CGTATACTGAATGTATCCTG....................................................................................................................................................................20129.002910000271
..............................................................AAACGTATACTGAATGTATCC......................................................................................................................................................................21122.002200000022
..................................................................................................CGGTATACCTTCAGTATACGTAAC...............................................................................................................................24114.001400000014
.....................................................................................................TATACCTTCAGTATACGTAACA..............................................................................................................................2219.0091000035
..................................................................................................CGGTATACCTTCAGTATACGT..................................................................................................................................2118.0082000024
..................................................................................................CGGTATACCTTCAGTATACGTA.................................................................................................................................2217.0071000006
..................................................................GTATACTGAATGTATCCTGA...................................................................................................................................................................2016.0060000042
..................................................................................................CGGTATACCTTCAGTATACG...................................................................................................................................2016.0060000033
................................................................ACGTATACTGAATGTATCCTGAGT.................................................................................................................................................................2413.0031000002
..............................................................AAACGTATACTGAATGTATCCTG....................................................................................................................................................................2313.0030000003
...................................................................TATACTGAATGTATCCTGA...................................................................................................................................................................1912.0020000011
.................................................................CGTATACTGAATGTATCC......................................................................................................................................................................1812.0020000002
...............................................................AACGTATACTGAATGTATCCTG....................................................................................................................................................................2212.0020000002
..............................................................AAACGTATACTGAATGTATCCTGA...................................................................................................................................................................2411.0010000001
..................................................................GTATACTGAATGTATCCTG....................................................................................................................................................................1911.0010000010
..................................................................GTATACTGAATGTATCCTGAG..................................................................................................................................................................2111.0010000010
................................................................ACGTATACTGAATGTATCCTGAG..................................................................................................................................................................2311.0010000001
...............................................................AACGTATACTGAATGTATCCT.....................................................................................................................................................................2111.0010000001
.................................................................CGTATACTGAATGTATCCT.....................................................................................................................................................................1911.0010000010
......................................................................................................ATACCTTCAGTATACGTAAC...............................................................................................................................2011.0010000001
................................................................ACGTATACTGAATGTATCCTGAGTGTATC............................................................................................................................................................2911.0010000001
.............................................................TAAACGTATACTGAATGTATCC......................................................................................................................................................................2211.0010000001
....................................................................ATACTGAATGTATCCTGAGTGTATCCT..........................................................................................................................................................2711.0010000001
...................................................................TATACTGAATGTATCCTG....................................................................................................................................................................1811.0010000010
....................................................................ATACTGAATGTATCCTGA...................................................................................................................................................................1811.0010000001
droEug1
A------CTTCATT-TTGGT-CAC-TTTC---GGATT--ATAGTGATTGTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGTGGGATGTG---------------------AA---ACAGTTTA-------CT-T----------------------------TAA---------AAAC--------CSizeHit CountTotal NormTotal
No Reads
droBia1
AGCGGCGCATCTTT-CTCGG-CAC-TTTT---GGATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG---------------------AA---ACACTTTA-------TT-T----------------------------TTG---------AAAA--------CSizeHit CountTotal NormTotal
No Reads
droTak1
AGCGGCGCATCCTTCTTTGG-CAC-TTTT---GGATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGTGGGATGTG---------------------AA---ACACTTTT-------CT-T----------------------------TTT---------AAAACTCGACGAASizeHit CountTotal NormTotal
No Reads
droEle1
GT-------------------CAC-TTTC---GGATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG---------------------AA---ACACTTTA-------CT-T----------------------------TAAA--------AATA--------TSizeHit CountTotal NormTotal
No Reads
droRho1
AGCGACGCATCCTG-TTTGG-CAC-TTTC---GGATT--ATGGTGATTCTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG---------------------AA---ACACTTTA-------CT-G----------------------------TTAAAACTGTTGA--A--------TSizeHit CountTotal NormTotal
No Reads
droFic1
AGCGACACGTC--T-TTCAGTCAC-TTTCGCCGGATTTCATAGTGATTGTGTGCGACCTCGTAAACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAGCACGAGCAACGCGGGATGTG---------------------AA---ACACTTTT-------C----------------------------------------CTTAAAA--------CSizeHit CountTotal NormTotal
No Reads
droKik1
TTT-TCGTGTCCTTTATAAG-CAC-TTGC---GGATG--ATGATGACTCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACAAGCAACGCGGGATGTG---------------------AA---ACACTTGAAA-------------------------------------------------AAAA--------TSizeHit CountTotal NormTotal
No Reads
droAna3
A----------------------CATTAC---GGAGG--ATGGTGATTTTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGTAACACCTTCAACGCGGGACGTG---------------------AA---A-ACTTAA---TATTC--------------------------------TGA--------AAT-ATTTAAAACSizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
.................................................................ACGTATACTGAATGTATCCTGA..................................................................................................................................................................221744.007441021463691
.................................................................ACGTATACTGAATGTATCCTG...................................................................................................................................................................211507.0050702034993
..................................................................CGTATACTGAATGTATCCTGA..................................................................................................................................................................21164.00640000631
..................................................................CGTATACTGAATGTATCCTG...................................................................................................................................................................20148.00480000480
.................................................................ACGTATACTGAATGTATCCT....................................................................................................................................................................20135.00350101285
.................................................................ACGTATACTGAATGTATCC.....................................................................................................................................................................19132.00320000329
......................................................................................................TATACCTTCAGTATACGTAAC..............................................................................................................................21112.00120000012
.................................................................ACGTATACTGAATGTATC......................................................................................................................................................................1815.005000005
......................................................................................................TATACCTTCAGTATACGTAACA.............................................................................................................................2215.005000104
...................................................................GTATACTGAATGTATCCTG...................................................................................................................................................................1914.004000040
...................................................................................................CGGTATACCTTCAGTATACGTAAC..............................................................................................................................2413.003000003
..................................................................CGTATACTGAATGTATCCT....................................................................................................................................................................1913.003000030
...................................................................................................CGGTATACCTTCAGTATACGTA................................................................................................................................2212.002000110
.................................................................ACGTATACTGAATGTATCCTGAGT................................................................................................................................................................2411.001000010
...................................................................GTATACTGAATGTATCCTGA..................................................................................................................................................................2011.001000010
..................................................................CGTATACTGAATGTATCCTGAGT................................................................................................................................................................2311.001000010
.....................................................................ATACTGAATGTATCCTGA..................................................................................................................................................................1811.001000010
..................................................................CGTATACTGAATGTATCCTGAG.................................................................................................................................................................2211.001000001
....................................................................TATACTGAATGTATCCTGA..................................................................................................................................................................1911.001000010
...................................................................................................CGGTATACCTTCAGTATACGT.................................................................................................................................2111.001000001
..................................................................CGTATACTGAATGTATCC.....................................................................................................................................................................1811.001000001
.................................................................ACGTATACTGAATGTATCCTGAG.................................................................................................................................................................2311.001000010
droBip1
AGCACTACTATCTT-ACCAG-AAAATTAC---GATGG--ATGGTGATTTTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACTTTCAACGCGGGACGTG---------------------AA---A-ACTTTG-------TT-T----------------------------TAGA--------AAT-ATTTCAAACSizeHit CountTotal NormTotal
No Reads
dp5
-------------T-TTCAG-CGG-TTAT---G---T--AGGATGAACCTGTGCGACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATACGT-------------------CGA---ACTG--------------------AAACCGAGCACTGTGATTTATTCTTGC-----AC---TT--------TSizeHit CountTotal NormTotalV112
Male-body		V043
Embryo		V051
Head		M022
Male-body		M040
Female-body		M059
Embryo		M062
Head
................................................................ACGTATACTGAATGTATCCTGA...................................................................................................................................................................2211865.0018650250519316753
................................................................ACGTATACTGAATGTATCCTG....................................................................................................................................................................211704.0070411411650370
................................................................ACGTATACTGAATGTATCC......................................................................................................................................................................19189.008901001861
.................................................................CGTATACTGAATGTATCCTGA...................................................................................................................................................................21189.008903008150
.................................................................CGTATACTGAATGTATCCTG....................................................................................................................................................................20160.006000006000
.....................................................................................................TATACCTTCAGTATACGTAAC...............................................................................................................................21136.003601003311
................................................................ACGTATACTGAATGTATCCT.....................................................................................................................................................................20133.003308002140
..................................................................................................CGGTATACCTTCAGTATACGTAAC...............................................................................................................................24131.003101002271
.....................................................................................................TATACCTTCAGTATACGTAACA..............................................................................................................................22121.002105005110
................................................................ACGTATACTGAATGTATC.......................................................................................................................................................................18112.001202000100
..................................................................GTATACTGAATGTATCCTG....................................................................................................................................................................1919.0090000900
..................................................................................................CGGTATACCTTCAGTATACG...................................................................................................................................2015.0050100400
..................................................................................................CGGTATACCTTCAGTATACGTA.................................................................................................................................2214.0040000400
..................................................................................................CGGTATACCTTCAGTATACGT..................................................................................................................................2114.0041000210
..................................................................GTATACTGAATGTATCCTGA...................................................................................................................................................................2014.0040000400
......................................................................................................ATACCTTCAGTATACGTAAC...............................................................................................................................2013.0030000120
.................................................................CGTATACTGAATGTATCCT.....................................................................................................................................................................1912.0020000200
.....................................................................................................TATACCTTCAGTATACGTAACAC.............................................................................................................................2312.0020000020
...................................................................TATACTGAATGTATCCTGA...................................................................................................................................................................1912.0020100100
...................................................................................................GGTATACCTTCAGTATAC....................................................................................................................................1812.0020000200
...............................................................TACGTATACTGAATGTATCCTG....................................................................................................................................................................2211.0010000100
...................................................................................................GGTATACCTTCAGTATACGTAAC...............................................................................................................................2311.0010000100
..................................................................................................CGGTATACCTTCAGTATACGTAA................................................................................................................................2311.0010100000
..................................................................................................CGGTATACCTTCAGTATAC....................................................................................................................................1911.0010000100
.....................................................................................................TATACCTTCAGTATACGTAA................................................................................................................................2011.0010000100
.................................................................CGTATACTGAATGTATCCTGAG..................................................................................................................................................................2211.0010000100
.................................................................CGTATACTGAATGTATCC......................................................................................................................................................................1811.0010000010
...................................................................TATACTGAATGTATCCTG....................................................................................................................................................................1811.0010000100
................................................................ACGTATACTGAATGTATCCTGAG..................................................................................................................................................................2311.0010000100
......................................................................................................ATACCTTCAGTATACGTAACA..............................................................................................................................2111.0010000100
.......................................................................................................TACCTTCAGTATACGTAACACGA...........................................................................................................................2311.0010000010
droPer2
-------------T-TTCAG-CGG-TTAT---G---T--AGGATGAACCTGTGCGACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATATGT-------------------CGA---ACTGAATTTAA-A--C--GTGTAA--ACCGAGCAC---------------------TGTGATT--------TSizeHit CountTotal NormTotalV111
Male-body		V042
Embryo		V050
Head		V057
Head		M021
Embryo		M042
Female-body
................................................................ACGTATACTGAATGTATCCTGA...................................................................................................................................................................221266.002660460191128
................................................................ACGTATACTGAATGTATCCTG....................................................................................................................................................................211115.0011505101891
.................................................................CGTATACTGAATGTATCCTGA...................................................................................................................................................................21110.0010000028
.................................................................CGTATACTGAATGTATCCTG....................................................................................................................................................................2018.008000008
................................................................ACGTATACTGAATGTATCC......................................................................................................................................................................1916.006010050
................................................................ACGTATACTGAATGTATCCT.....................................................................................................................................................................2015.005020003
.....................................................................................................TATACCTTCAGTATACGTAAC...............................................................................................................................2112.002000002
................................................................ACGTATACTGAATGTATC.......................................................................................................................................................................1812.002000011
...............................................................TACGTATACTGAATGTATCCTG....................................................................................................................................................................2211.001000010
..................................................................GTATACTGAATGTATCCTGA...................................................................................................................................................................2011.001000001
................................................................ACGTATACTGAATGTATCCTGAG..................................................................................................................................................................2311.001000001
.....................................................................................................TATACCTTCAGTATACGTAACA..............................................................................................................................2211.001000001
..................................................................................................CGGTATACCTTCAGTATACG...................................................................................................................................2011.001000001
.................................................................CGTATACTGAATGTATCCTGAG..................................................................................................................................................................2211.001000001
....................................................................ATACTGAATGTATCCTGA...................................................................................................................................................................1811.001000001
......................................................................................................ATACCTTCAGTATACGTAAC...............................................................................................................................2011.001010000
droWil2
-----------------------------------------GATGAATCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATGCTATCCGGTATACCTTCAGTATACGTAACACGATGAAACACCAACAACGCGGGATGTGT-------------------GAA---ACACTTTTTAT-T--C--------------------------------------------TTT--------TSizeHit CountTotal NormTotalV117
Male-body		V118
Embryo		V119
Head		M020
Head		M045
Female-body
................................................................ACGTATACTGAATGTATCCTGA...................................................................................................................................................................221693.00693033311358
................................................................ACGTATACTGAATGTATCCTG....................................................................................................................................................................211361.0036104702312
.................................................................CGTATACTGAATGTATCCTGA...................................................................................................................................................................21142.0042150036
................................................................ACGTATACTGAATGTATCCT.....................................................................................................................................................................20135.00350141020
.................................................................CGTATACTGAATGTATCCTG....................................................................................................................................................................20126.0026000026
.....................................................................................................TATACCTTCAGTATACGTAACA..............................................................................................................................22118.0018015003
..................................................................................................CGGTATACCTTCAGTATACGT..................................................................................................................................2116.00606000
..................................................................GTATACTGAATGTATCCTGA...................................................................................................................................................................2014.00401012
................................................................ACGTATACTGAATGTATCCTGAG..................................................................................................................................................................2313.00302001
..................................................................................................CGGTATACCTTCAGTATACGTA.................................................................................................................................2213.00301002
...............................................................TACGTATACTGAATGTATCCT.....................................................................................................................................................................2112.00202000
..................................................................................................CGGTATACCTTCAGTATACGTAA................................................................................................................................2312.00202000
.................................................................CGTATACTGAATGTATCCT.....................................................................................................................................................................1912.00200002
................................................................ACGTATACTGAATGTATCCTGAGT.................................................................................................................................................................2412.00201001
...................................................................TATACTGAATGTATCCTGAGTG................................................................................................................................................................2212.00202000
................................................................ACGTATACTGAATGTATCCTGAGTGT...............................................................................................................................................................2612.00202000
.....................................................................................................TATACCTTCAGTATACGTAAC...............................................................................................................................2112.00202000
..................................................................................................CGGTATACCTTCAGTATACG...................................................................................................................................2012.00201001
................................................................ACGTATACTGAATGTATCC......................................................................................................................................................................1912.00201001
...................................................................TATACTGAATGTATCCTG....................................................................................................................................................................1811.00100001
................................................................ACGTATACTGAATGTATCCTGAGTG................................................................................................................................................................2511.00101000
.................................................................CGTATACTGAATGTATCC......................................................................................................................................................................1811.00100001
.............................................................TATACGTATACTGAATGTATCC......................................................................................................................................................................2211.00101000
...............................................................TACGTATACTGAATGTATC.......................................................................................................................................................................1911.00101000
......................................................................................................ATACCTTCAGTATACGTAAC...............................................................................................................................2011.00100001
..................................................................................................CGGTATACCTTCAGTATACGTAAC...............................................................................................................................2411.00100001
.....................................................................................................TATACCTTCAGTATACGTAA................................................................................................................................2011.00101000
................................................................ACGTATACTGAATGTATC.......................................................................................................................................................................1811.00101000
droVir3
TA-------------------------------------TTGTAGAGCCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCGACGCGGGATGTG---------------------TG---ATATATTT-AGATTGC----------------------------------------ATTAAAA--------TSizeHit CountTotal NormTotalV116
Male-body		V053
Head		V047
Embryo		M027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis
................................................................ACGTATACTGAATGTATCCTGA...................................................................................................................................................................2211351.0013510018113421270263110100031158179201530431155036136633679504118315
................................................................ACGTATACTGAATGTATCCTG....................................................................................................................................................................211729.007290015140314020010000016124161374822195966126165406110104
................................................................ACGTATACTGAATGTATCCT.....................................................................................................................................................................201151.00151001003320000000000792890188023149572501100041
.................................................................CGTATACTGAATGTATCCTGA...................................................................................................................................................................21170.007000000388000000000000022000101010811400011001
................................................................ACGTATACTGAATGTATCC......................................................................................................................................................................19155.005500020543000000000000020200000000000100000000
.................................................................CGTATACTGAATGTATCCTG....................................................................................................................................................................20153.005300000470000000000000000200100000111000000000
..................................................................................................CGGTATACCTTCAGTATACG...................................................................................................................................20122.002200000210000000000000010000000000000000000000
..................................................................................................CGGTATACCTTCAGTATACGT..................................................................................................................................21122.00220000040000000000001101003600100301000000010
..................................................................................................CGGTATACCTTCAGTATACGTAAC...............................................................................................................................24119.00190000017000000000000020100000000000000152000
................................................................ACGTATACTGAATGTATC.......................................................................................................................................................................18110.00100001112000000000000010100001100000100000000
.....................................................................................................TATACCTTCAGTATACGTAAC...............................................................................................................................2116.0060000014000000000000000000000001000000000000
.....................................................................................................TATACCTTCAGTATACGTAACA..............................................................................................................................2216.0060000060000000000000000000000000000000000000
..................................................................................................CGGTATACCTTCAGTATACGTA.................................................................................................................................2216.0060000050000000000000000000000000000000100000
..................................................................GTATACTGAATGTATCCTG....................................................................................................................................................................1914.0040000040000000000000000000000000000000000000
..................................................................GTATACTGAATGTATCCTGA...................................................................................................................................................................2014.0040000040000000000000000000000000000000000000
.....................................................................................................TATACCTTCAGTATACGTAA................................................................................................................................2013.0030000000000000000000000000000000000200000001
.................................................................CGTATACTGAATGTATCCT.....................................................................................................................................................................1913.0030000030000000000000000000000000000000000000
..................................................................................................CGGTATACCTTCAGTATACGTAA................................................................................................................................2312.0020000000000000000010000000000010000000000000
...................................................................................................GGTATACCTTCAGTATACGTAAC...............................................................................................................................2312.0020000011000000000000000000000000000000000000
.................................................................CGTATACTGAATGTATCCTGAG..................................................................................................................................................................2211.0010000000000000000000001000000000000000000000
....................................................................ATACTGAATGTATCCTGA...................................................................................................................................................................1811.0010000010000000000000000000000000000000000000
...................................................................TATACTGAATGTATCCTGA...................................................................................................................................................................1911.0010000010000000000000000000000000000000000000
.......................................................................................................TACCTTCAGTATACGTAAC...............................................................................................................................1911.0010000010000000000000000000000000000000000000
......................................................................................................ATACCTTCAGTATACGTAAC...............................................................................................................................2011.0010000010000000000000000000000000000000000000
..................................................................................................CGGTATACCTTCAGTATAC....................................................................................................................................1911.0010000010000000000000000000000000000000000000
................................................................................................TCCGGTATACCTTCAGTATACGTAAC...............................................................................................................................2611.0010000000000000000000000000000000000000010000
...................................................................................................GGTATACCTTCAGTATACGT..................................................................................................................................2011.0010000000000000000000000000000000000000000010
...................................................................................................GGTATACCTTCAGTATACGTA.................................................................................................................................2111.0010000010000000000000000000000000000000000000
................................................................ACGTATACTGAATGTATCCTGAG..................................................................................................................................................................2311.0010000000000000000000000000000000000100000000
droMoj3
----------------------------------------TGTTGAGCCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATGTGT-------------------GAA---A-ACTTC--AATA-----------------------------------------------------------SizeHit CountTotal NormTotalV110
Male-body		V056
Head		V049
Head		V041
Embryo		M046
Female-body		M060
Embryo
................................................................ACGTATACTGAATGTATCCTGA...................................................................................................................................................................22113359.001335901019768012481
................................................................ACGTATACTGAATGTATCCTG....................................................................................................................................................................211937.0093700022565350
................................................................ACGTATACTGAATGTATCC......................................................................................................................................................................191784.0078400006778
.................................................................CGTATACTGAATGTATCCTGA...................................................................................................................................................................211170.00170000167102
..................................................................................................CGGTATACCTTCAGTATACGTAAC...............................................................................................................................241147.0014700020145
................................................................ACGTATACTGAATGTATCCT.....................................................................................................................................................................201125.0012500074078
................................................................ACGTATACTGAATGTATC.......................................................................................................................................................................181108.0010800001107
.....................................................................................................TATACCTTCAGTATACGTAAC...............................................................................................................................21182.00820002080
.................................................................CGTATACTGAATGTATCCTG....................................................................................................................................................................20170.00700000700
.....................................................................................................TATACCTTCAGTATACGTAACA..............................................................................................................................22132.00320003524
..................................................................GTATACTGAATGTATCCTGA...................................................................................................................................................................20122.00220001516
..................................................................................................CGGTATACCTTCAGTATACG...................................................................................................................................20111.00110000110
..................................................................................................CGGTATACCTTCAGTATACGT..................................................................................................................................21111.0011000326
.................................................................CGTATACTGAATGTATCC......................................................................................................................................................................1819.009000018
....................................................................ATACTGAATGTATCCTGA...................................................................................................................................................................1819.009000009
..................................................................GTATACTGAATGTATCCTG....................................................................................................................................................................1919.009000081
..................................................................................................CGGTATACCTTCAGTATACGTA.................................................................................................................................2218.008000026
...................................................................TATACTGAATGTATCCTGA...................................................................................................................................................................1917.007000034
.....................................................................................................TATACCTTCAGTATACGTAACAC.............................................................................................................................2315.005000104
...................................................................................................GGTATACCTTCAGTATACGTAAC...............................................................................................................................2314.004000004
.................................................................CGTATACTGAATGTATCCT.....................................................................................................................................................................1914.004000040
................................................................ACGTATACTGAATGTATCCTGAG..................................................................................................................................................................2314.004000004
..............................................................ATACGTATACTGAATGTATCCT.....................................................................................................................................................................2214.004000004
......................................................................................................ATACCTTCAGTATACGTAAC...............................................................................................................................2014.004000004
.............................................................TATACGTATACTGAATGTATCC......................................................................................................................................................................2214.004000013
................................................................ACGTATACTGAATGTATCCTGAGT.................................................................................................................................................................2413.003000003
......................................................................................................ATACCTTCAGTATACGTAACAC.............................................................................................................................2213.003000003
....................................................................................................GTATACCTTCAGTATACGTAAC...............................................................................................................................2213.003000012
...............................................................TACGTATACTGAATGTATCCTG....................................................................................................................................................................2213.003000111
.................................................................CGTATACTGAATGTATCCTGAG..................................................................................................................................................................2213.003000102
..................................................................................................CGGTATACCTTCAGTATACGTAA................................................................................................................................2312.002000002
...............................................................TACGTATACTGAATGTATCCTGA...................................................................................................................................................................2312.002000020
......................................................................................................ATACCTTCAGTATACGTAACA..............................................................................................................................2112.002000011
...................................................................TATACTGAATGTATCCTG....................................................................................................................................................................1811.001000010
...................................................................................................GGTATACCTTCAGTATACGTA.................................................................................................................................2111.001000010
droGri2
---------------------CAC-TCTT---G---------TAGAACCTGTGCAACTTCGTATACGTATACTGAATGTATCCTGAGTGTATCCTATCCGGTATACCTTCAGTATACGTAACACGAGGAAACACCAGCAACGCGGGATGTGTTTTGTATATATATAAATTTCGATAAATAATACA-------CTG------AA----AACAC---------------------TTTGTCA--------CSizeHit CountTotal NormTotalV109
Male-body		M041
Female-body
................................................................ACGTATACTGAATGTATCCTGA...................................................................................................................................................................221145.001450145
................................................................ACGTATACTGAATGTATCCTG....................................................................................................................................................................21134.0034034
.................................................................CGTATACTGAATGTATCCTGA...................................................................................................................................................................21113.0013013
.................................................................CGTATACTGAATGTATCCTG....................................................................................................................................................................2016.00606
................................................................ACGTATACTGAATGTATCCT.....................................................................................................................................................................2015.00505
..................................................................................................CGGTATACCTTCAGTATACG...................................................................................................................................2012.00202
..................................................................GTATACTGAATGTATCCTGA...................................................................................................................................................................2011.00101
...................................................................................................GGTATACCTTCAGTATACGTAAC...............................................................................................................................2311.00101
................................................................ACGTATACTGAATGTATCC......................................................................................................................................................................1911.00101
.....................................................................................................TATACCTTCAGTATACGTAACA..............................................................................................................................2211.00101
.................................................................CGTATACTGAATGTATCCT.....................................................................................................................................................................1911.00101

Generated: 12/06/2013 at 02:40 PM