ID:

dsi-mir-991

 Coordinate:

2R:15134391-15134508 -

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.1 -18.9 -18.5

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TTGTATAGTACCCTTTTTTGGAACCAAGCCCTTTGAGAAACTTACCTGCGGGGTATATCAAAAATATCACTGCAGTTTCAGGCTTTTCCCAACTACATCTATTAATATTTATTTTAACGTCGTATTAAAGTTGAAGTTTGGAAAATTTTGGTTTTGCATTTGAAATCCGCCACTCAACTTTCTTCTAAAAATATTGAGGTATGCTAGCCCCATTTTGT
**********************************************************************(((((..(((((.((((((.((((.((.((.(((((((.............))))))))).)).)))).)))))).)))))..)))))...********************************************************* 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 M024
male body
 SRR553485
Ovary		 SRR553487
Ovary		 SRR618934
Ovary		 M025
embryo
 SRR553488
Ovary		 O002
Head
 GSM343915
embryo
 M023
head
 M053
Female-body		 SRR553486
Ovary
............................................................................................................................TTAAAGTTGAAGTTTGGAAAAT........................................................................ 22 0 1 1509.00 1509 574 343 188 201 84 44 48 10 9 2 5 1
..........CCCTTTTTTGGAACCAAGCCCT.......................................................................................................................................................................................... 22 0 1 1315.00 1315 997 240 0 0 0 48 0 17 3 9 1 0
..........CCCTTTTTTGGAACCAAGCCC........................................................................................................................................................................................... 21 0 1 1073.00 1073 1003 34 0 0 0 12 0 20 1 3 0 0
............................................................................................................................TTAAAGTTGAAGTTTGGAAAA......................................................................... 21 0 1 744.00 744 270 185 155 67 42 9 6 2 6 0 1 1
............................................................................................................................TTAAAGTTGAAGTTTGGAAA.......................................................................... 20 0 1 494.00 494 104 76 187 71 33 8 3 1 8 1 2 0
............................................................................................................................TTAAAGTTGGAGTTTGGAAAAT........................................................................ 22 1 1 273.00 273 0 0 0 41 0 0 65 0 0 0 0 167
............................................................................................................................TTAAAGTTGAAGTTTGGAA........................................................................... 19 0 1 210.00 210 96 3 80 9 17 0 3 0 1 0 1 0
............................................................................................................................TTAAAGTTGGAGTTTGGAAA.......................................................................... 20 1 1 208.00 208 0 0 0 8 0 0 13 0 0 0 0 187
..........CCCTTTTTTGGAACCAAGCC............................................................................................................................................................................................ 20 0 1 201.00 201 187 9 0 0 0 1 0 2 0 1 1 0
............................................................................................................................TTAAAGTTGGAGTTTGGAAAA......................................................................... 21 1 1 182.00 182 0 0 2 12 0 0 21 0 0 0 0 147
..........CCCTTTTTTGGAACCAAG.............................................................................................................................................................................................. 18 0 1 158.00 158 156 0 0 0 0 0 0 2 0 0 0 0
...........................................................................................................................ATTAAAGTTGAAGTTTGGAAAA......................................................................... 22 0 1 126.00 126 83 4 1 16 8 6 5 2 1 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGGAAAATA....................................................................... 23 1 1 115.00 115 0 87 7 18 0 2 1 0 0 0 0 0
..........CCCTTTTTTGGAACCAAGC............................................................................................................................................................................................. 19 0 1 97.00 97 94 0 0 0 0 0 0 3 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGGA............................................................................ 18 0 1 97.00 97 72 2 14 3 5 0 0 1 0 0 0 0
..........CCCTTTTTTGGAACCAAGCCCTT......................................................................................................................................................................................... 23 0 1 91.00 91 82 6 0 0 0 0 0 3 0 0 0 0
............................................................................................................................TTAAAGTTGGAGTTTGGAA........................................................................... 19 1 1 81.00 81 0 0 1 0 0 0 6 0 0 0 0 74
............................................................................................................................TTAAAGTTGAAGTTTGGAAAAA........................................................................ 22 1 1 57.00 57 0 37 10 2 7 0 0 0 1 0 0 0
...........................................................................................................................ATTAAAGTTGAAGTTTGGAAA.......................................................................... 21 0 1 47.00 47 25 4 3 7 5 2 1 0 0 0 0 0
..................................................................................................................................................................................................TGAGGTATGCTAGCCCCATTTT.. 22 0 1 40.00 40 39 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................TGAGGTATGCTAGCCCCATTT... 21 0 1 36.00 36 36 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGGAAAATT....................................................................... 23 0 1 26.00 26 0 23 2 0 0 1 0 0 0 0 0 0
..........CCCTTTTTTGGAACCAAGCCCC.......................................................................................................................................................................................... 22 1 1 26.00 26 0 20 0 0 0 5 0 0 0 1 0 0
.....................................................................................TTCCCAACTACATCTATTAATAT.............................................................................................................. 23 0 1 26.00 26 22 1 1 1 0 0 0 0 0 0 0 1
..................................................................................................................................................................................................TGAGGTATGCTAGCCCCAT..... 19 0 1 23.00 23 22 0 0 0 0 0 0 1 0 0 0 0
....................................................................................TTTCCCAACTACATCTATTAAT................................................................................................................ 22 0 1 22.00 22 11 8 1 0 0 1 0 0 0 0 0 1
............................................................................................................................TTAAAGTTGAAGTTTGGAAAAAA....................................................................... 23 2 1 21.00 21 0 14 2 1 3 0 0 0 1 0 0 0
............................................................................................................................TTAAAGTTGGAGTTTGGA............................................................................ 18 1 1 20.00 20 0 0 0 0 0 0 1 0 0 0 0 19
............................................................................................................................TTAAAGTTGGAGTTTGGAAAAA........................................................................ 22 2 1 19.00 19 0 0 0 1 0 0 4 0 0 0 0 14
...........................................................................................................................ATTAAAGTTGAAGTTTGGA............................................................................ 19 0 1 17.00 17 15 0 0 0 2 0 0 0 0 0 0 0
....................................................................................TTTCCCAACTACATCTATTA.................................................................................................................. 20 0 1 16.00 16 16 0 0 0 0 0 0 0 0 0 0 0
....................................................................................TTTCCCAACTACATCTAT.................................................................................................................... 18 0 1 16.00 16 16 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGAGGTATGCTAGCCCCATT.... 20 0 1 16.00 16 16 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ATTAAAGTTGAAGTTTGGAA........................................................................... 20 0 1 15.00 15 8 0 4 1 2 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGAGGTATGCTAGCCCCA...... 18 0 1 14.00 14 14 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TAAAGTTGAAGTTTGGAAAAT........................................................................ 21 0 1 13.00 13 11 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................TAAAGTTGAAGTTTGGAAAA......................................................................... 20 0 1 13.00 13 11 0 0 0 0 2 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGGAGTTTGGAAAATA....................................................................... 23 2 1 13.00 13 0 0 0 0 0 0 6 0 0 0 0 7
.....................................................................................TTCCCAACTACATCTATTAATA............................................................................................................... 22 0 1 12.00 12 11 0 0 0 0 0 0 1 0 0 0 0
....................................................................................TTTCCCAACTACATCTATTAA................................................................................................................. 21 0 1 11.00 11 10 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................TTCCCAACTACATCTATT................................................................................................................... 18 0 1 10.00 10 10 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGGAGTTTGGAAAATT....................................................................... 23 1 1 9.00 9 0 0 0 0 0 0 0 0 0 0 0 9
..........CCCTTTTTTGGAACCAAGCCCG.......................................................................................................................................................................................... 22 1 1 9.00 9 0 7 0 0 0 2 0 0 0 0 0 0
...........................................................................................................................ATTAAAGTTGGAGTTTGGAAAA......................................................................... 22 1 1 9.00 9 0 0 0 0 0 0 5 0 0 0 0 4
.....................................................................................TTCCCAACTACATCTATTA.................................................................................................................. 19 0 1 8.00 8 8 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ATTAAAGTTGGAGTTTGGAAA.......................................................................... 21 1 1 8.00 8 0 0 0 0 0 0 3 0 0 0 0 5
...........................................................................................................................ATTAAAGTTGAAGTTTGG............................................................................. 18 0 1 7.00 7 5 0 1 0 1 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGGAAAATAAA..................................................................... 25 3 1 7.00 7 0 2 2 3 0 0 0 0 0 0 0 0
.....................................................................................TTCCCAACTACATCTATTAAT................................................................................................................ 21 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0
..........CCCTTTTTTGGAACCAAGCCT........................................................................................................................................................................................... 21 1 1 5.00 5 0 5 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGGAT........................................................................... 19 1 1 5.00 5 0 3 1 0 1 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGGAGTTTGGAAAT......................................................................... 21 2 1 4.00 4 0 0 0 0 0 0 0 0 0 0 0 4
..........CCCTTTTTTGGAACCAAGCCCTTT........................................................................................................................................................................................ 24 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GTTGAAGTTTGGAAA.......................................................................... 15 0 1 4.00 4 0 0 0 0 4 0 0 0 0 0 0 0
....................................................................................TTTCCCAACTACATCTATT................................................................................................................... 19 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ATTAAAGTTGGAGTTTGGA............................................................................ 19 1 1 3.00 3 0 0 0 1 0 0 0 0 0 0 0 2
.....................................................................................TTCCCAACTACATCTATTAA................................................................................................................. 20 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGGAAAAAAA...................................................................... 24 3 3 3.00 9 0 5 2 0 2 0 0 0 0 0 0 0
.................................................................................................................................GTTGAAGTTTGGAAAA......................................................................... 16 0 1 3.00 3 0 0 0 0 3 0 0 0 0 0 0 0
....................................................................................TTTCCCAACTACATCTATTAATA............................................................................................................... 23 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGG............................................................................. 17 0 1 3.00 3 0 0 1 0 2 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGGAGTTTGGAAAATAA...................................................................... 24 3 1 3.00 3 0 0 0 0 0 0 3 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGGAAAAC........................................................................ 22 1 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................GAGGTATGCTAGCCCCATT.... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TAAAGTTGAAGTTTGGAA........................................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTCGAAAAT........................................................................ 22 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
..........CCCTTTTTTGGAACCAAGCCG........................................................................................................................................................................................... 21 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGGAGTTTGGAAAAAA....................................................................... 23 3 2 2.00 4 0 0 0 0 0 0 2 0 0 0 0 2
............................................................................................................................TTAAAGTTGGAGGTTGGAAAAT........................................................................ 22 2 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 2
.................................................................................................................................GTTGAAGTTTGGAAAAT........................................................................ 17 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0
...........................................................................................................................ATTAAAGTTGGAGTTTGGAA........................................................................... 20 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTG.............................................................................. 16 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0
............................................................................................................................TGAAAGTTGGAGTTTGGAAAAT........................................................................ 22 2 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 2
..............................................................................................................................AAAGTTGAAGTTTGGAAAAT........................................................................ 20 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGGAAAAAT....................................................................... 23 1 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGGAAT.......................................................................... 20 1 1 2.00 2 0 0 1 0 0 0 0 0 0 1 0 0
...............................................................................................................................AAGTTGAAGTTTGGAAAAT........................................................................ 19 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGGAGTTTGG............................................................................. 17 1 2 2.00 4 0 0 0 0 0 0 0 0 0 0 0 4
..................................................................................................................................TTGGAGTTTGGAAAATTTTGGTTTTGCA............................................................ 28 1 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0
............................................................................................................................TTAAAGTTGTAGTTTGGAAAGT........................................................................ 22 2 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
...........CCCTTTTTGGAACCAAGCCCT.......................................................................................................................................................................................... 21 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTTGAAAAT........................................................................ 22 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTCGGAAAAT........................................................................ 22 1 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................CTTAAAGTTGAAGTTTGGAAAA......................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAATTTTGGAA........................................................................... 19 1 2 1.00 2 0 0 2 0 0 0 0 0 0 0 0 0
.....................................................................................TTCCCAACTACATCTATTAATACA............................................................................................................. 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAATTTTGGAAAAA........................................................................ 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGGAAAATTAA..................................................................... 25 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..........CCCTTTTTTGGAACCGAGCCCG.......................................................................................................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGGAGTTTGGAAAG......................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................CTAAAGTTGAAGTTTGGAAAAT........................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGGAAG.......................................................................... 20 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................TAAAGTTGGAGTTTGGAAAAT........................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................TTAAAGTTGAAGTTTGTAAAATA....................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........CCCTTTTTTGCAACCAAGCCCT.......................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TGAAAGTTGGAGTTTGGAAAA......................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................ATTAAAGTTGAAGCTTGGAAAA......................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................ATTAAAGTTGAGGTTTGG............................................................................. 18 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAACGTTGAAGTTTGGAAAAT........................................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................................TTAAAGTTGGAGGTTGGAAA.......................................................................... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
.................TTGGAACCAAGCCCTTTGAGA.................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGCTTGGAAA.......................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TAAAGTTGAAGTTTGGAAA.......................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................TTTGAGAAACTTACCTGCGGGGTATAT................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGGAGTTTGAAAAAT........................................................................ 22 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGGAAAC......................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........CCCTTTTTTGGAACCAAGAC............................................................................................................................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ATTAAAGTTGAAGTTTGGT............................................................................ 19 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTCGGAAA.......................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........CCCTTTTTTTGGAACCAAGCCCT.......................................................................................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TAAAGTTGGAGTTTGGAAAA......................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................TTAAAGTTGGAGTTTTGAAAA......................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................TTAAAGTTGAAGTTTAGAAA.......................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................TTCCCAACTACATCTATTAATATT............................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAATTTTGGAAA.......................................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................AGTTGAAGTTTGGAAAAT........................................................................ 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...........CCTTTTTTGGAACCAAGCCCT.......................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGGAAAATAA...................................................................... 24 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGGAGTTCGGAAAAT........................................................................ 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................TTAAAGTTGAAGTTTGGAAAATGG...................................................................... 24 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................ATAAAGTTGAAGTTTGGAAA.......................................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................GAGGTATGCTAGCCCCAT..... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGGAGTTTGGAAAATG....................................................................... 23 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGGAAAT......................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................AAAGTTGAAGTTTGGAAA.......................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGCAGTTTGGAAAAT........................................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................TTAAAGTCGAAGTTTGGAAAAT........................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGGT............................................................................ 18 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGAGGTATGCTAGCAC........ 16 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAACTTTGGAAAAT........................................................................ 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAATTTGAAGTTTGGAAAAT........................................................................ 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGTAAAAT........................................................................ 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................TAAAGTTGAAGTTTGGAAAATA....................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAGGTTGAAGTTTGGAAAAT........................................................................ 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGGAGAA......................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................................ATAAAGTTGAAGTTTGGAAAAT........................................................................ 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................TCCCAACTACATCTATTAATAT.............................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TAAGGTATGCTAGCCC........ 16 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................TTAGAGTTGAAGTTTGGAAAAT........................................................................ 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........TACCCTTTTTTGGAACCA................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TGAAAGTTGAAGTTTGGAA........................................................................... 19 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........TACCCTTTTTTGGAACCAA............................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............CTTTTTTGGAACCAAGCCCT.......................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................GAGGTATGCTAGCCCCATTTTG. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTGAGGTATGCTAGCCCCATTTT.. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTTAAGTTTGGAAAA......................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................TTGAAGTTGGAGTTTGGAAAAT........................................................................ 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................TTAAAGTTGAAGTTTGGAAAATC....................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGCTGAAGTTTGGAAAA......................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGTAAA.......................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................TTAAAGTTGAAGTTTGGAATAA........................................................................ 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGGAAAATAAT..................................................................... 25 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TTGAAGTTTGGAAAAT........................................................................ 16 0 2 1.00 2 0 0 0 0 2 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGTAGTTTGGAA........................................................................... 19 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................CTTAAAGTTGAAGTTTGGAAAAT........................................................................ 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTGAGGTATGCTAGCCCCATTT... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TAAAAGTTGAAGTTTGGAAAAT........................................................................ 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGTAGTTTGGAAAA......................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGGAGTTTGGAAAAC........................................................................ 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................TTAAAGTTGAAGTTTGGAAAATTA...................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TAAAAGTTGAAGTTTGGAAAA......................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........CCCCTTTTTGGAACCAAGCCCT.......................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........CCCTTTTTTGGAACCAGGCCCT.......................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................AATAAAGTTGGAGTTTGGAAAA......................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................ACTAAAGTTGAAGTTTGGAAAA......................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................ATAAAGTTGGAGTTTGGAAAAT........................................................................ 22 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................TTAAAGTTGGAGTTTGAAAAA......................................................................... 21 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
.........CCCCTTTTTTGGACCCAAGGCC........................................................................................................................................................................................... 22 3 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................TTGAAGTTTGGAAAA......................................................................... 15 0 4 0.50 2 0 0 0 0 2 0 0 0 0 0 0 0
...........................................................................................................................ATTAAAGTTGAATTTTGGAA........................................................................... 20 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................TTAAAGTTCAAGTTTGGAAA.......................................................................... 20 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGGAGTTTGGAAT.......................................................................... 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................TTAAAGTTGAAGTTTAAAAAAT........................................................................ 22 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................TTAATGTTGAAGTTTGGAAA.......................................................................... 20 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGGTAT.......................................................................... 20 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................TGAAGTTTGGAAAAT........................................................................ 15 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................ATAAAGTTGGAGTTTGGAAA.......................................................................... 20 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1
.................................................................................................................................GTTGAAGTTTGGAAAATA....................................................................... 18 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................CTAAAGTTGAATTTTGGAA........................................................................... 19 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGGATT.......................................................................... 20 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGAGAAA......................................................................... 21 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................ATAAAGTTGGAGTTTGGAA........................................................................... 19 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................TTAAAGTTGGAGTTTGGAT........................................................................... 19 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1
..............TTTTTGGAACCAAGG............................................................................................................................................................................................. 15 1 14 0.14 2 0 0 0 2 0 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGGAGTTTG.............................................................................. 16 1 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................ATTAAAGTCGGAGTTTGG............................................................................. 18 2 10 0.10 1 0 0 0 0 0 0 1 0 0 0 0 0
..........................................TACCTGCGGGGTAGAG................................................................................................................................................................ 16 2 14 0.07 1 0 0 0 0 0 0 1 0 0 0 0 0
.........................................TTACCTGCGGCGTAGAGCA.............................................................................................................................................................. 19 3 14 0.07 1 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................TTAAAGTTGAAGTTTGGTT........................................................................... 19 2 14 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................TTAAAGTTGGAGTTTGAAAAT......................................................................... 21 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................TCTGCGAAAACTATTGAGG................... 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

ACAAAATGGGGCTAGCATACCTCAATATTTTTAGAAGAAAGTTGAGTGGCGGATTTCAAATGCAAAACCAAAATTTTCCAAACTTCAACTTTAATACGACGTTAAAATAAATATTAATAGATGTAGTTGGGAAAAGCCTGAAACTGCAGTGATATTTTTGATATACCCCGCAGGTAAGTTTCTCAAAGGGCTTGGTTCCAAAAAAGGGTACTATACAA
*********************************************************...(((((..(((((.((((((.((((.((.(((((((((.............))))))).)).)).)))).)))))).)))))..)))))********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total
....AATTGGGGTAGCATACCTGAA................................................................................................................................................................................................. 21 3 2 0.50 1
......................................................................................................................................................................................TCACTGGGCTTGGTTCCA.................. 18 2 5 0.20 1
..................................................................................................................................................................................TATCTGAAAGGGCTTGGATC.................... 20 3 5 0.20 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 2R:15134341-15134558 - dsi-mir-991 TT-----------GTATAGTACCCTTTTTTGGAACCAAGCCCTTTGAGAAACTTACCTGCGGGGTATATCAAAAATATC-ACTGCAGTTTCAGGCTTTTCCCAACTACATCTATTAATATTTATTTTAACGTCGTATTAAAGTTGAAGTTTGGAAAATTTTGGTTTTGCATTTGAAATCCGCCACTCAACTT---------TCTTCTAAAAATATTGAGGTATGCTA-GCCCCATTTTGT
droSec2 scaffold_1:14027366-14027586 - dse_45 TGTT--------TGTATAGTACACGTTTCTGGAACCAAGCCCTTTGAGAAACTTACCTGCGGGGTATATCAAAAATATC-AGTGCAGTTTCAGTCTTTTCCCAACTACATCTATTAATACTTATTTTAACGTCGTATTAAAGTTGAAGTTTGGAAAATTTTGGTTTTGCATTTGAAATCCGCCACTCAACTTG-----G----TTCTAAAATTATTGAGGTATGCTA-GGTCCTTTTTGT
dm3 chr2R:16472644-16472867 - dme-mir-991 TTTA--------TGTAAAGTACACGTTTCTGGTACTAAGTACTTCGAGAAAGTTACCTGCGTAGGATATCAAAACTATC-ACTGCAGTTTCAGGCTTTTCCCAACTACACCTATTAATACATATTTTAACGTCCTATTAAAGTTGTAGTTTGGAAAGTTTTGGTTTTGCATTAGAAATC-GCCACTCAACTTG-----GTTTTTTCTAAAATTATTTAGGTCCGTTTTGCATATTTT-AG
droEre2 scaffold_4845:10618986-10619209 - der_52 TTTG--------GGTAAAGTACACGTTACTGGTACTAGGTACTTTGAGAAACATGACTACGGAGAATACC-AAACTAGC-ACTGCAGCTTCAAGCTTTTCCCCACTCCTTGCTTTAGTACTTATTTTAATGTCGTATTAAAGCCAGAGTTTGGAAAGTTTTGATTCTGCTTTTTAAATC-GCCACCCAACTTA-----TAGTTTTCCAGAAATATTTAAGTCTGTTATGCATAGTTTTGT
droYak3 2R:12723714-12723938 + dya_121 TTTG--------GTTAAAGTACACGTTACTGGTACTACGTACTTCGAGAAACCTAACTACGGAGGATACA-AAAAAATCGCCTGCAGTTTCAAGCTTTTCCCCACTCCTTGCTTTAATACTTATTTTAACGTCGTATTAAAGCCAGAGTTTGGAAAGTTTTGATTCTGCATTAGAAATC-GCCACCCAACTTT-----GATTTTTCTAGAAATATTTAAGTCTGTTCTGCTTAGATTTGT
droBia1 scf7180000302291:2814925-2815087 + G-----------AGTAAAGTATACATTACTGGTGTTACGCATTTTGAGAAATATATCAACGGGGGACAAAAAAATCAGC-ACGGCAATCTCAGACTTTTCT-CGCTCCTGGCCTTAGTACTCGATTTGA---CTTATTAAAGCCGAAAGTGAGAAAATTTTGATTCTGCATCTTACATC-------------------------------------------------------------
droTak1 scf7180000415401:101054-101279 - G-----------AGAGAAGTACAAGTTACTGGTGCTGTGTGTTTTGAGAAGAATATCTACGAGGAATACA-AAAGGAGC-TCGGCAATTTCAGGCTTTTCCGAAATCTTAGCTTTAATACTTAGTTTAATGTCGTATTAAAGCTAGATTTCGGGAAATCTTGATTCTGCAGTTAAATTGCAAAGTGAAAA-TGGTTTGTTTTGTTTTATCAATATTTAGGCCGGTTTAGCAGGATTTTGT
droRho1 scf7180000780104:83223-83455 - TTTACCGATTGGGTTAAAGTACACGTTACTGGTTTTACATATTTAAAGAAATATATCTACGAGGGATACGCAAGTGAGC-ATGGCAGACTCTGATTTTTTCAGACTCTTCGCTTAAATACTTAATTTAGTGTCGTATTAAAGCCGGAGTTTGAAAGAATTTGTTTCTGCATTTGTTTTC-GAAATAAAAACTA-----CAAAATTTCCTAAATATTTAAGTTGATTCCGCTTAGATTTGT
droFic1 scf7180000454039:1777258-1777426 - TT-G--------ATTAAAGTACACGGTGCTGGGCCCTTATACTTAAAGAAATATTTTACTGAGAAACGTAAAAACAAGC-ACGGTAGACTCGGGCTTTTCG-GATCCCGGGCTTTACTACCGAATATAGTGCCGTAATAAAGCCGGAGATTGGAAAATTTCGGATCTGAATTTAAAATCC------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
TT-----------GTATAGTACCCTTTTTTGGAACCAAGCCCTTTGAGAAACTTACCTGCGGGGTATATCAAAAATATC-ACTGCAGTTTCAGGCTTTTCCCAACTACATCTATTAATATTTATTTTAACGTCGTATTAAAGTTGAAGTTTGGAAAATTTTGGTTTTGCATTTGAAATCCGCCACTCAACTT---------TCTTCTAAAAATATTGAGGTATGCTA-GCCCCATTTTGTSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
........................................................................................................................................TTAAAGTTGAAGTTTGGAAAAT..................................................................................2211509.001509923434457410518812014884
.....................CCCTTTTTTGGAACCAAGCCCT.....................................................................................................................................................................................................2211315.001315392404899717100000
.....................CCCTTTTTTGGAACCAAGCCC......................................................................................................................................................................................................2111073.001073133412100320000000
........................................................................................................................................TTAAAGTTGAAGTTTGGAAAA...................................................................................211744.0074460185927021155167642
........................................................................................................................................TTAAAGTTGAAGTTTGGAAA....................................................................................201494.004948176810412187071333
........................................................................................................................................TTAAAGTTGAAGTTTGGAA.....................................................................................191210.00210103096018009317
.....................CCCTTTTTTGGAACCAAGCC.......................................................................................................................................................................................................201201.0020101911872100000
.....................CCCTTTTTTGGAACCAAG.........................................................................................................................................................................................................181158.0015800001562000000
.......................................................................................................................................ATTAAAGTTGAAGTTTGGAAAA...................................................................................221126.0012610468320101658
.....................CCCTTTTTTGGAACCAAGC........................................................................................................................................................................................................19197.00970000943000000
........................................................................................................................................TTAAAGTTGAAGTTTGGA......................................................................................18197.009700207210140305
.....................CCCTTTTTTGGAACCAAGCCCTT....................................................................................................................................................................................................23191.00910060823000000
.......................................................................................................................................ATTAAAGTTGAAGTTTGGAAA....................................................................................21147.00470042250030715
.......................................................................................................................................................................................................................TGAGGTATGCTA-GCCCCATTTT..22140.00400000390000010
.......................................................................................................................................................................................................................TGAGGTATGCTA-GCCCCATTT...21136.00360000360000000
........................................................................................................................................TTAAAGTTGAAGTTTGGAAAATT.................................................................................23126.00260023100020000
.................................................................................................TTCCCAACTACATCTATTAATAT........................................................................................................................23126.00260010220011100
.......................................................................................................................................................................................................................TGAGGTATGCTA-GCCCCAT.....19123.00230000221000000
................................................................................................TTTCCCAACTACATCTATTAAT..........................................................................................................................22122.00220081110011000
.......................................................................................................................................ATTAAAGTTGAAGTTTGGA......................................................................................19117.00170000150000002
................................................................................................TTTCCCAACTACATCTATTA............................................................................................................................20116.00160000160000000
................................................................................................TTTCCCAACTACATCTAT..............................................................................................................................18116.00160000160000000
.......................................................................................................................................................................................................................TGAGGTATGCTA-GCCCCATT....20116.00160000160000000
.......................................................................................................................................ATTAAAGTTGAAGTTTGGAA.....................................................................................20115.0015000080040102
.......................................................................................................................................................................................................................TGAGGTATGCTA-GCCCCA......18114.00140000140000000
.........................................................................................................................................TAAAGTTGAAGTTTGGAAAAT..................................................................................21113.00130010110010000
.........................................................................................................................................TAAAGTTGAAGTTTGGAAAA...................................................................................20113.00130002110000000
.................................................................................................TTCCCAACTACATCTATTAATA.........................................................................................................................22112.00120000111000000
................................................................................................TTTCCCAACTACATCTATTAA...........................................................................................................................21111.00110010100000000
.................................................................................................TTCCCAACTACATCTATT.............................................................................................................................18110.00100000100000000
.................................................................................................TTCCCAACTACATCTATTA............................................................................................................................1918.008000080000000
.......................................................................................................................................ATTAAAGTTGAAGTTTGG.......................................................................................1817.007000050010001
.................................................................................................TTCCCAACTACATCTATTAAT..........................................................................................................................2116.006000060000000
.....................CCCTTTTTTGGAACCAAGCCCTTT...................................................................................................................................................................................................2414.004000040000000
.............................................................................................................................................GTTGAAGTTTGGAAA....................................................................................1514.004000000000004
................................................................................................TTTCCCAACTACATCTATT.............................................................................................................................1913.003000030000000
.................................................................................................TTCCCAACTACATCTATTAA...........................................................................................................................2013.003000030000000
.............................................................................................................................................GTTGAAGTTTGGAAAA...................................................................................1613.003000000000003
................................................................................................TTTCCCAACTACATCTATTAATA.........................................................................................................................2313.003000030000000
........................................................................................................................................TTAAAGTTGAAGTTTGG.......................................................................................1713.003000000010002
........................................................................................................................................................................................................................GAGGTATGCTA-GCCCCATT....1912.002000020000000
.........................................................................................................................................TAAAGTTGAAGTTTGGAA.....................................................................................1812.002000020000000
.............................................................................................................................................GTTGAAGTTTGGAAAAT..................................................................................1712.002000000000002
........................................................................................................................................TTAAAGTTGAAGTTTG........................................................................................1612.002000000000002
..........................................................................................................................................AAAGTTGAAGTTTGGAAAAT..................................................................................2012.002000010000100
...........................................................................................................................................AAGTTGAAGTTTGGAAAAT..................................................................................1912.002000000000002
............................TTGGAACCAAGCCCTTTGAGA...............................................................................................................................................................................................2111.001000000010000
.........................................................................................................................................TAAAGTTGAAGTTTGGAAA....................................................................................1911.001000010000000
..........................................TTTGAGAAACTTACCTGCGGGGTATAT...........................................................................................................................................................................2711.001000000000001
.................................................................................................TTCCCAACTACATCTATTAATATT.......................................................................................................................2411.001000010000000
............................................................................................................................................AGTTGAAGTTTGGAAAAT..................................................................................1811.001000000000001
......................CCTTTTTTGGAACCAAGCCCT.....................................................................................................................................................................................................2111.001000010000000
........................................................................................................................................................................................................................GAGGTATGCTA-GCCCCAT.....1811.001000010000000
..........................................................................................................................................AAAGTTGAAGTTTGGAAA....................................................................................1811.001000000010000
..................................................................................................TCCCAACTACATCTATTAATAT........................................................................................................................2211.001000010000000
...................TACCCTTTTTTGGAACCA...........................................................................................................................................................................................................1811.001000010000000
...................TACCCTTTTTTGGAACCAA..........................................................................................................................................................................................................1911.001000010000000
.......................CTTTTTTGGAACCAAGCCCT.....................................................................................................................................................................................................2011.001000001000000
........................................................................................................................................................................................................................GAGGTATGCTA-GCCCCATTTTG.2211.001000010000000
......................................................................................................................................................................................................................TTGAGGTATGCTA-GCCCCATTTT..2311.001000010000000
..............................................................................................................................................TTGAAGTTTGGAAAAT..................................................................................1621.002000000000002
......................................................................................................................................................................................................................TTGAGGTATGCTA-GCCCCATTT...2211.001000010000000
..............................................................................................................................................TTGAAGTTTGGAAAA...................................................................................1540.502000000000002
...............................................................................................................................................TGAAGTTTGGAAAAT..................................................................................1530.331000000000001
droSec2
TGTT--------TGTATAGTACACGTTTCTGGAACCAAGCCCTTTGAGAAACTTACCTGCGGGGTATATCAAAAATATC-AGTGCAGTTTCAGTCTTTTCCCAACTACATCTATTAATACTTATTTTAACGTCGTATTAAAGTTGAAGTTTGGAAAATTTTGGTTTTGCATTTGAAATCCGCCACTCAACTTG-----G----TTCTAAAATTATTGAGGTATGCTA-GGTCCTTTTTGTSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
........................................................................................................................................TTAAAGTTGAAGTTTGGAAAA...................................................................................211622.0062256532241
........................................................................................................................................TTAAAGTTGAAGTTTGGAAAAT..................................................................................221490.00490411482110
........................................................................................................................................TTAAAGTTGAAGTTTGGAAA....................................................................................201470.0047041235158
.......................................................................................................................................ATTAAAGTTGAAGTTTGGAAAA...................................................................................22151.005149200
........................................................................................................................................TTAAAGTTGAAGTTTGGAA.....................................................................................19150.005039740
.................AGTACACGTTTCTGGAACCAAGC........................................................................................................................................................................................................23143.0043142333
.................AGTACACGTTTCTGGAACCAAG.........................................................................................................................................................................................................22120.002016310
.......................................................................................................................................................................................................................TGAGGTATGCTA-GGTCCTTTTT..22116.00164831
.......................................................................................................................................ATTAAAGTTGAAGTTTGGAAA....................................................................................21115.001513110
........................................................................................................................................TTAAAGTTGAAGTTTGGAAAATT.................................................................................23110.001010000
.........................................................................................................................................TAAAGTTGAAGTTTGGAAAAT..................................................................................2116.0062103
........................................................................................................................................TTAAAGTTGAAGTTTGGAAAATTT................................................................................2415.0055000
........................................................................................................................................TTAAAGTTGAAGTTTGGA......................................................................................1814.0040130
.................AGTACACGTTTCTGGAACCAA..........................................................................................................................................................................................................2113.0032100
.......................................................................................................................................................................................................................TGAGGTATGCTA-GGTCCTTTT...2112.0022000
.......................................................................................................................................ATTAAAGTTGAAGTTTGGAA.....................................................................................2012.0022000
.........................................................................................................................................TAAAGTTGAAGTTTGGAAA....................................................................................1912.0022000
..........................................................................................................................................AAAGTTGAAGTTTGGAAA....................................................................................1812.0021001
..................GTACACGTTTCTGGAACCAAGC........................................................................................................................................................................................................2212.0020101
.......................................................................................................................................ATTAAAGTTGAAGTTTGGAAAAT..................................................................................2312.0022000
.......................................................................................................................................................................................................................TGAGGTATGCTA-GGTCCTTT....2012.0022000
..................GTACACGTTTCTGGAACCAAG.........................................................................................................................................................................................................2112.0022000
.........................................................................................................................................TAAAGTTGAAGTTTGGAAAA...................................................................................2011.0011000
................................................................................................TTTCCCAACTACATCTATTAAT..........................................................................................................................2211.0011000
.......................................................................................................................................................................................................................TGAGGTATGCTA-GGTCCTTTTTG.2311.0010100
.................AGTACACGTTTCTGGAACCA...........................................................................................................................................................................................................2011.0011000
......................................................................................................................................................................................................................TTGAGGTATGCTA-GGTCCT......1911.0010010
..........................................................................................................................................AAAGTTGAAGTTTGGAAAAT..................................................................................2011.0010010
.......................................................................................................................................................................................................................TGAGGTATGCTA-GGTCCTTTTTGT2411.0011000
droEre2
TTTG--------GGTAAAGTACACGTTACTGGTACTAGGTACTTTGAGAAACATGACTACGGAGAATACC-AAACTAGC-ACTGCAGCTTCAAGCTTTTCCCCACTCCTTGCTTTAGTACTTATTTTAATGTCGTATTAAAGCCAGAGTTTGGAAAGTTTTGATTCTGCTTTTTAAATC-GCCACCCAACTTA-----TAGTTTTCCAGAAATATTTAAGTCTGTTATGCATAGTTTTGTSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
........................................................................................................................................TTAAAGCCAGAGTTTGGAAAGT..................................................................................222508.50101731088277423
........................................................................................................................................TTAAAGCCAGAGTTTGGAAAG...................................................................................212375.50751136597990
........................................................................................................................................TTAAAGCCAGAGTTTGGAAA....................................................................................202101.00202011772040
.......................................................................................................................................................................................................................TTAAGTCTGTTATGCATAGTTT...22135.00350030500
.......................................................................................................................................................................................................................TTAAGTCTGTTATGCATAGTT....21126.00260219500
.................AGTACACGTTACTGGTACTAGG.........................................................................................................................................................................................................22218.50370000370
.......................................................................................................................................................................................................................TTAAGTCTGTTATGCATAGTTTT..23116.00160210220
........................................................................................................................................TTAAAGCCAGAGTTTGGAAAGTT.................................................................................23215.00300027120
.......................................................................................................................................................................................................................TTAAGTCTGTTATGCATAGT.....20110.0010018010
........................................................................................................................................TTAAAGCCAGAGTTTGGAA.....................................................................................1938.00241022010
.......................................................................................................................................................................................................................TTAAGTCTGTTATGCATAGTTTTG.2416.006002310
................................................................................................TTTCCCCACTCCTTGCTTTAGT..........................................................................................................................2225.0010016030
................................................................................................TTTCCCCACTCCTTGCTTTAG...........................................................................................................................2123.507004120
.................AGTACACGTTACTGGTACTAG..........................................................................................................................................................................................................2123.006000060
........................................................................................................................................................................................................................TAAGTCTGTTATGCATAGTTTTG.2313.003003000
.........................................................................................................................................TAAAGCCAGAGTTTGGAAAG...................................................................................2022.004001120
.........................................................................................................................................TAAAGCCAGAGTTTGGAAAGT..................................................................................2122.004002020
..................GTACACGTTACTGGTACTAGG.........................................................................................................................................................................................................2121.002000020
........................................................................................................................................................................................................................TAAGTCTGTTATGCATAGTTT...2111.001000010
.......................................................................................................................................ATTAAAGCCAGAGTTTGGAAA....................................................................................2121.002002000
.................AGTACACGTTACTGGTACT............................................................................................................................................................................................................1920.501000001
.....................CACGTTACTGGTACTAGGTACT.....................................................................................................................................................................................................2220.501001000
..TG--------GGTAAAGTACACGTTACTGGTAC.............................................................................................................................................................................................................2520.501001000
.TTG--------GGTAAAGTACACGTTACTGGTAC.............................................................................................................................................................................................................2620.501001000
...................TACACGTTACTGGTACTAGGTA.......................................................................................................................................................................................................2220.501000100
................................................................................................TTTCCCCACTCCTTGCTTTAGTA.........................................................................................................................2320.501000100
...............................................................................................................................AATGTCGTATTAAAGCCAGAGTTTGG.......................................................................................2620.501001000
..................GTACACGTTACTGGTACTAG..........................................................................................................................................................................................................2020.501000010
.......................................................................................................................................................................................................................TTAAGTCTGTTATGCATA.......1820.501000100
...................TACACGTTACTGGTACTAGG.........................................................................................................................................................................................................2020.501000010
........................................................................................................................................TTAAAGCCAGAGTTTGGA......................................................................................1830.331000100
droYak3
TTTG--------GTTAAAGTACACGTTACTGGTACTACGTACTTCGAGAAACCTAACTACGGAGGATACA-AAAAAATCGCCTGCAGTTTCAAGCTTTTCCCCACTCCTTGCTTTAATACTTATTTTAACGTCGTATTAAAGCCAGAGTTTGGAAAGTTTTGATTCTGCATTAGAAATC-GCCACCCAACTTT-----GATTTTTCTAGAAATATTTAAGTCTGTTCTGCTTAGATTTGTSizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
........................................................................................................................................TTAAAGCCAGAGTTTGGAAAGT..................................................................................221268.0026850229001321
........................................................................................................................................TTAAAGCCAGAGTTTGGAAAG...................................................................................211253.00253002411821
........................................................................................................................................TTAAAGCCAGAGTTTGGAAA....................................................................................201101.0010101922231
.......................................................................................................................................................................................................................TTAAGTCTGTTCTGCTTAGATT...22194.0094003053731
.................AGTACACGTTACTGGTACTACG.........................................................................................................................................................................................................22120.002000000128
.......................................................................................................................................................................................................................TTAAGTCTGTTCTGCTTAGA.....20115.00150030813
................................................................................................TTTCCCCACTCCTTGCTTTAAT..........................................................................................................................22112.001200000102
.......................................................................................................................................................................................................................TTAAGTCTGTTCTGCTTAGATTT..23111.00110000254
.......................................................................................................................................................................................................................TTAAGTCTGTTCTGCTTAGAT....21110.00100020332
........................................................................................................................................TTAAAGCCAGAGTTTGGAAAGTT.................................................................................2319.0090090000
.................AGTACACGTTACTGGTACTAC..........................................................................................................................................................................................................2114.0040000013
...................TACACGTTACTGGTACTACG.........................................................................................................................................................................................................2014.0040020101
................................................................................................TTTCCCCACTCCTTGCTTTAA...........................................................................................................................2114.0040000121
................................................................................................TTTCCCCACTCCTTGCTTTA............................................................................................................................2013.0030010020
..................GTACACGTTACTGGTACTACG.........................................................................................................................................................................................................2113.0030000030
.........................................................................................................................................TAAAGCCAGAGTTTGGAAAGT..................................................................................2113.0030010020
................................................................................................TTTCCCCACTCCTTGCTTTAATA.........................................................................................................................2313.0031000020
.................................................................................................TTCCCCACTCCTTGCTTTAAT..........................................................................................................................2112.0020000020
........................................................................................................................................TTAAAGCCAGAGTTTGGAA.....................................................................................1931.6750050000
.........................................................................................................................................TAAAGCCAGAGTTTGGAAAG...................................................................................2011.0010010000
.................AGTACACGTTACTGGTACTA...........................................................................................................................................................................................................2011.0010000010
.............................................................................TCGCCTGCAGTTTCAAGCT................................................................................................................................................1911.0010000001
........................................................................................................................................................................................................................TAAGTCTGTTCTGCTTAGAT....2011.0010000010
.................AGTACACGTTACTGGTACT............................................................................................................................................................................................................1911.0010000010
...................TACACGTTACTGGTACTA...........................................................................................................................................................................................................1811.0010000100
..................................................................................................TCCCCACTCCTTGCTTTAAT..........................................................................................................................2011.0010000010
droBia1
G-----------AGTAAAGTATACATTACTGGTGTTACGCATTTTGAGAAATATATCAACGGGGGACAAAAAAATCAGC-ACGGCAATCTCAGACTTTTCT-CGCTCCTGGCCTTAGTACTCGATTTGA---CTTATTAAAGCCGAAAGTGAGAAAATTTTGATTCTGCATCTTACATC-------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
G-----------AGAGAAGTACAAGTTACTGGTGCTGTGTGTTTTGAGAAGAATATCTACGAGGAATACA-AAAGGAGC-TCGGCAATTTCAGGCTTTTCCGAAATCTTAGCTTTAATACTTAGTTTAATGTCGTATTAAAGCTAGATTTCGGGAAATCTTGATTCTGCAGTTAAATTGCAAAGTGAAAA-TGGTTTGTTTTGTTTTATCAATATTTAGGCCGGTTTAGCAGGATTTTGTSizeHit CountTotal NormTotal
No Reads
droRho1
TTTACCGATTGGGTTAAAGTACACGTTACTGGTTTTACATATTTAAAGAAATATATCTACGAGGGATACGCAAGTGAGC-ATGGCAGACTCTGATTTTTTCAGACTCTTCGCTTAAATACTTAATTTAGTGTCGTATTAAAGCCGGAGTTTGAAAGAATTTGTTTCTGCATTTGTTTTC-GAAATAAAAACTA-----CAAAATTTCCTAAATATTTAAGTTGATTCCGCTTAGATTTGTSizeHit CountTotal NormTotal
No Reads
droFic1
TT-G--------ATTAAAGTACACGGTGCTGGGCCCTTATACTTAAAGAAATATTTTACTGAGAAACGTAAAAACAAGC-ACGGTAGACTCGGGCTTTTCG-GATCCCGGGCTTTACTACCGAATATAGTGCCGTAATAAAGCCGGAGATTGGAAAATTTCGGATCTGAATTTAAAATCC------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 12/06/2013 at 02:39 PM