ID:

dsi-mir-983

 Coordinate:

X:3277334-3277453 -

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-31.9

Flybase annnotation

Antisense to intron [Dsim\GD16688-in]

No Repeatable elements found

Sense Strand Reads

GAGTCGTCAACTCGGTGAGTGAATGTGAATGGCTTCTACTCTCTACTTCATTGCTTTGCATATGATATCTTGCAGTAATTTAGTAATACCTTTCGAACACATGATTTTCAGTCATTCATGAGTTCGTCAGGTATTATCTAGTTATTGTAAACATTCAACTCGCTGGCGGATGAGGAATTACTTGTGATGTACGATTCGAGCGTATTTATCTGTGAATGGC
******************************************************************...(((((((((((..(((((((((..(((((.(((((...........))))).)))))..)))))))))..)))))))))))....****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 M024
male body
 M025
embryo
 SRR553485
Ovary		 SRR553486
Ovary		 SRR618934
Ovary		 SRR553487
Ovary		 M023
head
 SRR553488
Ovary		 O002
Head
 M053
Female-body		 GSM343915
embryo
.....................................................................................................................ATGAGTTCGTCAGGTATTATCT................................................................................. 22 0 1 2257.00 2257 397 1229 394 22 21 83 4 100 3 3 1 0
.................................................................................AGTAATACCTTTCGAACACATG..................................................................................................................... 22 0 1 1725.00 1725 1069 43 3 174 193 39 101 2 68 16 9 8
.................................................................................AGTAATACCTTTCGAACACATGA.................................................................................................................... 23 0 1 1089.00 1089 694 28 26 123 92 27 43 2 25 17 7 5
.................................................................................AGTAATACCTTTCGAACACA....................................................................................................................... 20 0 1 930.00 930 872 12 0 3 2 2 5 2 3 27 2 0
......................................................................................................................TGAGTTCGTCAGGTATTATCT................................................................................. 21 0 1 806.00 806 227 340 57 33 25 60 17 27 9 8 1 2
.................................................................................AGTAATACCTTTCGAACACAT...................................................................................................................... 21 0 1 755.00 755 660 27 6 13 8 3 8 9 4 16 1 0
.....................................................................................................................ATGAGTTCGTCAGGTATTATC.................................................................................. 21 0 1 625.00 625 108 353 63 5 4 62 3 25 0 1 0 1
......................................................................................................................TGAGTTCGTCAGGTATTATCTA................................................................................ 22 0 1 528.00 528 174 132 68 39 34 38 25 5 7 5 0 1
.................................................................................AGTAATACCTTTCGAACAC........................................................................................................................ 19 0 1 232.00 232 228 1 0 0 2 0 0 0 0 1 0 0
.................................................................................AGTAATACCTTTCGAACA......................................................................................................................... 18 0 1 193.00 193 185 0 0 0 1 1 0 0 0 6 0 0
.....................................................................................................................ATGAGTTCGTCAGGTATTA.................................................................................... 19 0 1 134.00 134 130 3 0 0 0 1 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGTATTA.................................................................................... 18 0 1 118.00 118 117 0 0 0 0 0 0 0 0 1 0 0
......................................................................................................................TGAGTTCGTCAGGTATTATC.................................................................................. 20 0 1 116.00 116 63 31 5 1 3 7 0 4 0 1 0 1
.................................................................................AGTAATACCTTTCGAACACATGAAA.................................................................................................................. 25 2 1 104.00 104 0 10 6 34 12 4 29 0 8 0 0 1
.....................................................................................................................ATGAGTTCGTCAGGTATTATCC................................................................................. 22 1 1 82.00 82 0 55 20 0 0 0 0 7 0 0 0 0
.................................................................................AGTAATACCTTTCGAACACATGAT................................................................................................................... 24 0 1 53.00 53 38 6 0 1 0 0 2 2 1 3 0 0
......................................................................................................................TGAGTTCGTCAGGTATTATCTAA............................................................................... 23 1 1 47.00 47 0 16 15 4 1 5 5 0 1 0 0 0
......................................................................................................................TGAGTTCGTCAGGTATTATCTAT............................................................................... 23 1 1 37.00 37 0 9 2 0 3 19 1 1 1 0 0 1
.....................................................................................................................ATGAGTTCGTCAGGTATT..................................................................................... 18 0 1 31.00 31 24 3 1 0 0 3 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGTATTAT................................................................................... 20 0 1 31.00 31 21 4 0 0 3 1 1 0 0 1 0 0
.....................................................................................................................ATGAGTTCGTCAGGGATTATCT................................................................................. 22 1 1 31.00 31 0 27 3 0 0 0 0 1 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGTATTATCTAAA.............................................................................. 24 2 1 28.00 28 0 4 1 0 2 4 14 0 3 0 0 0
......................................................................................................................TGAGTTCGTCAGGTATTAT................................................................................... 19 0 1 26.00 26 23 0 0 0 0 2 1 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGTATTATCG................................................................................. 22 1 1 24.00 24 0 16 6 0 0 0 0 2 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGTATTATCTA................................................................................ 23 0 1 24.00 24 1 9 1 1 3 3 5 0 1 0 0 0
.................................................................................AGTAATACCTTTCGAACACATGAA................................................................................................................... 24 1 1 19.00 19 0 3 2 5 4 1 2 0 2 0 0 0
......................................................................................................................TGAGTTCGTCAGGTATTATCC................................................................................. 21 1 1 19.00 19 0 11 5 0 0 0 0 3 0 0 0 0
.................................................................................AGTAATACCTTTCGAACACATGG.................................................................................................................... 23 1 1 16.00 16 0 12 4 0 0 0 0 0 0 0 0 0
.................................................................................AGTAATACCTTTCGAACACATGT.................................................................................................................... 23 1 1 14.00 14 0 10 1 0 0 2 1 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGTATTATCTT................................................................................ 23 1 1 12.00 12 0 12 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGTA....................................................................................... 15 0 1 10.00 10 0 0 0 0 0 10 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGTATTATCTAAAA............................................................................. 25 3 1 9.00 9 0 0 0 1 1 2 3 0 1 0 1 0
..................................................................................GTAATACCTTTCGAACACATGA.................................................................................................................... 22 0 1 8.00 8 6 0 0 1 0 0 0 0 0 0 1 0
.....................................................................................................................ATGAGTTCGTCAGGGATTATC.................................................................................. 21 1 1 7.00 7 0 7 0 0 0 0 0 0 0 0 0 0
.................................................................................AGTAATACCTTTCGAACACATGAAAA................................................................................................................. 26 3 1 7.00 7 0 1 1 1 2 0 2 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGAATTATCT................................................................................. 22 1 1 7.00 7 0 7 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGTATTATCA................................................................................. 22 1 1 7.00 7 0 5 0 0 1 1 0 0 0 0 0 0
.....................................................................................ATACCTTTCGAACACATG..................................................................................................................... 18 0 1 6.00 6 0 0 0 1 0 5 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGTATTATCTAC............................................................................... 23 1 1 6.00 6 0 3 1 0 0 2 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGTATTATCG................................................................................. 21 1 1 6.00 6 0 3 2 1 0 0 0 0 0 0 0 0
.........................................................................................................................GTTCGTCAGGTATTATCT................................................................................. 18 0 1 6.00 6 0 0 0 0 0 6 0 0 0 0 0 0
..................................................................................GTAATACCTTTCGAACACATG..................................................................................................................... 21 0 1 5.00 5 2 0 0 0 3 0 0 0 0 0 0 0
.......................................................................................................................GAGTTCGTCAGGTATTATCT................................................................................. 20 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGTA....................................................................................... 16 0 1 5.00 5 0 0 0 0 0 5 0 0 0 0 0 0
.................................................................................ATTAATACCTTTCGAACACATGA.................................................................................................................... 23 1 1 4.00 4 0 0 0 1 2 1 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGAATTATC.................................................................................. 21 1 1 4.00 4 0 4 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGGATTATCT................................................................................. 21 1 1 4.00 4 0 4 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGATTTCGTCAGGTATTATCT................................................................................. 21 1 1 4.00 4 0 1 3 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGT........................................................................................ 15 0 1 4.00 4 0 0 0 0 0 4 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGTATTATCTTT............................................................................... 24 2 1 4.00 4 0 4 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGTATTATCTTT............................................................................... 23 2 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATGATTTCGTCAGGTATTATCT................................................................................. 22 1 1 3.00 3 0 2 1 0 0 0 0 0 0 0 0 0
....................................TACTTTCTACTTCATTCCTTTCC................................................................................................................................................................. 23 3 1 3.00 3 0 0 0 0 0 0 3 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGCATTATCT................................................................................. 22 1 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0
..................................................................................GTAATACCTTTCGAACACATGAT................................................................................................................... 23 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGTATTATCTG................................................................................ 22 1 1 3.00 3 0 1 2 0 0 0 0 0 0 0 0 0
....................................................................................AATACCTTTCGAACACATGAAGT................................................................................................................. 23 2 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCGGGTATTATCT................................................................................. 22 1 1 2.00 2 0 1 0 0 0 1 0 0 0 0 0 0
.................................................................................AGTAATACCTTTCGAACACATGAC................................................................................................................... 24 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGTATTATCTAAA.............................................................................. 25 2 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGTATTATT.................................................................................. 21 1 1 2.00 2 0 0 1 0 0 0 0 1 0 0 0 0
.......................................................................................................................GAGTTCGTCAGGTATTATC.................................................................................. 19 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................ATGAGCTCGTCAGGTATTATCT................................................................................. 22 1 1 2.00 2 0 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................ATACCTTTCGAACACATGA.................................................................................................................... 19 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 1 0
......................................................................................................................TGAGTTCGTCAGGTATTATCTT................................................................................ 22 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGTATTATCTATAAA............................................................................ 26 3 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGAATTATCT................................................................................. 21 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................AAGAGTTCGTCAGGTATTATC.................................................................................. 21 1 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0
.................................................................................ATTAATACCTTTCGAACACATG..................................................................................................................... 22 1 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGCCAGGTATTATCT................................................................................. 22 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATGGGTTCGTCAGGTATTATCT................................................................................. 22 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
........................................................................................................................AGTTCGTCAGGTATTATCT................................................................................. 19 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................AATACCTTTCGAACACATG..................................................................................................................... 19 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGTATTATCTAA............................................................................... 24 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATGACTTCGTCAGGTATTATCT................................................................................. 22 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATGAGCTCGTCAGGTATTATC.................................................................................. 21 1 1 2.00 2 0 1 0 0 0 0 0 1 0 0 0 0
........................................................................................CCTTTCGAACACATGA.................................................................................................................... 16 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0
.................................................................................AGTAATACCTTTCGAACACATGAAC.................................................................................................................. 25 2 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
.................................................................................GGTAATACCTTTCGAACACATGA.................................................................................................................... 23 1 1 2.00 2 0 0 0 1 1 0 0 0 0 0 0 0
.................................................................................AATAATACCTTTCGAACACATGA.................................................................................................................... 23 1 1 2.00 2 0 0 0 0 0 0 1 0 0 0 1 0
......................................................................................................................TGAGTTCGTCAGGTATTATCTAG............................................................................... 23 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................AGTAATACCTTTCGAACACATT..................................................................................................................... 22 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................AAGAGTTCGTCAGGTATTATCT................................................................................. 22 1 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0
....................................................................................AATACCTTTCGAACACATGA.................................................................................................................... 20 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGGATTATCTA................................................................................ 22 1 1 2.00 2 0 0 1 0 1 0 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGTATT..................................................................................... 17 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGTATTAA................................................................................... 20 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGAGTTCGGCAGGTATTATC.................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GAGTTCTTCAGGTATTATCT................................................................................. 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................AAGGAGTAATACCTTTCGAACACATG..................................................................................................................... 26 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................AGGAATACCTTTCGAACACATG..................................................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................AGTAATACCTTTCAAACACATGA.................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
.................................................................................ACTAATACCTTTCGAACACATG..................................................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................ATACCTTTCGAACACA....................................................................................................................... 16 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................TTAGTTCGTCAGGTATTATCTAT............................................................................... 23 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................GTACTACCTTTCGAACACATG..................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
.......................................................................................................................GAGTTCGTCAGGTATTATCG................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................AGTAATACCTTTCGAACACATGATA.................................................................................................................. 25 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................AGTAATACCATTCGAACACATG..................................................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................AGTAATACCTTTCGAACACATAAA................................................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGTATTATCTTA............................................................................... 23 2 2 1.00 2 0 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGCTATTATCT................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TAAGTTCGTCAGGTATTATC.................................................................................. 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGATATTATCT................................................................................. 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGTATTATCTACA.............................................................................. 24 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGTATCG.................................................................................... 19 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATGAGCTCGTCAGGTATTATCC................................................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGTATTATCTATAA............................................................................. 25 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................ATGACTTCGTCAGGTATTATCC................................................................................. 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................AGTAATACCTTCCGAACACATG..................................................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................AGTAATACCTTTCGTACACATG..................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
.................................................................................AGTAATACCTTTCGAACATATGA.................................................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................AGGAGTTCGTCAGGTATTATC.................................................................................. 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGTATTATCTAGT.............................................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCACGGATTATCT................................................................................. 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................................................................................ATGAGTTCGTCAGGCATTATC.................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................ATTAATACCTTTCGAATACATGA.................................................................................................................... 23 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................CGGAGTAATACCTTTCGAACACATG..................................................................................................................... 25 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................GAGTTCGTCAGGTATTATCTA................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................AGGAATACCTTTCGAACACATGATA.................................................................................................................. 25 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................TAAGTTCGTCAGGTATTATCT................................................................................. 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................TCGTCAGGTATTATCT................................................................................. 16 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................TGGTGAGTTCGTCAGGTATT..................................................................................... 20 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGTATTATTC................................................................................. 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGTATTATCTCGA.............................................................................. 24 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGGCAGGTATTATCT................................................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TGATTTCGTCAGGTATTATCTAA............................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATGAATTCGTCAGGTATTATCT................................................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................ATGTGTTCGTCAGGTATTATC.................................................................................. 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGTATTATCTC................................................................................ 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGTATTATCTTTT.............................................................................. 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................AGAAATACCTTTCGAACACA....................................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATGAGATCGTCAGGTATTATCT................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATGCGTTCGTCAGGTATTATCT................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................CGTAATACCTTTCGAACACATGA.................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................GTAATACCTTTCGAACACAT...................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGGATTAT................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAAGTATTATCTA................................................................................ 22 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
......................................................................................................................CGAGTTCGTCAGGTATTATC.................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCTGGTATTATCTA................................................................................ 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................AGTAATACCTTTCGAACACATGAG................................................................................................................... 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGTACTATCT................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................ACCTTTCGAACACATGA.................................................................................................................... 17 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................GTTCGTCAGGTATTATCTAT............................................................................... 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................AGTAATACCCTTCGAACACATG..................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................AGCAATACCTTTCGAACACATGA.................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................................................................................ATGAGTTCATCAGGTATTATC.................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGGGTTCGTCAGGTATTATCTT................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGGATTATCC................................................................................. 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................GAGTTCGTCAGGTATTATCTAT............................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGTTTTATC.................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATCAGTTCGTCAGGTATTATCT................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGGATTATCA................................................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................AGTAATACCTTTCGAACACAG...................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGAGTGCGTCAGGTATTATCT................................................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................AGTAATACCTTTCGAA........................................................................................................................... 16 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................AATAATACCTTTCGAACACATGAAA.................................................................................................................. 25 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................TCGTCAGGTATTATCTA................................................................................ 17 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................ATGAGTTAGTCAGGTATTATCT................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................TTTTCAGTCATTCATGAGTTCGTCAGG......................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
...................................................................................TAATACCTTTCGAACACATGA.................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................AGTAATACCTTTCGAACACATGAAT.................................................................................................................. 25 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................TTTAATACCTTTCGAACACATG..................................................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................AGTAGTACCTTTCGAACACATG..................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGTATTATCAAA............................................................................... 24 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGCATTATCTA................................................................................ 23 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................AGTAATACCTTTCGAACACAA...................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................TGAGTACGTCAGGTATTATCTA................................................................................ 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................ATGAGGTCGTCAGGGATTATCT................................................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGTATTTTCT................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTTAGGTATTATCT................................................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................TGAGTTCGGCAGGTATTATCTA................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................AGTAATACCTTTCGAACACAAG..................................................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCTTCAGGTATTATCT................................................................................. 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................AGTAATATTTTTCGAACACATGA.................................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGGATTATC.................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................AGTAATACCTTTCGA............................................................................................................................ 15 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................TGGAATACCTTTCGAACACATG..................................................................................................................... 22 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................AGGAGTTCGTCAGGTATT..................................................................................... 18 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................AGTAATACCTTTCGGACACATG..................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGCATTATCT................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ACGAGTTCGTCAGGTATTATCT................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGACTTCGTCAGGTATTATCT................................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................GGAGTTCGTCAGGTATTATCTA................................................................................ 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................AGTAATACCTTTCGAAAACATG..................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
......................................................................................................................CGAGTTCGTCAGGTATTATCTA................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGCCAGGTATTATCG................................................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................GTGAGTTCGTCAGGTATTATCA................................................................................. 22 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTAAGGTATTATCT................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................TAGTAATACCTTTCGAACAC........................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGTATTATCTG................................................................................ 23 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................TGAGTTCATCAGGTATTATCTA................................................................................ 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGGCAGGTATTATC.................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................GGTAATACCTTTCGAACACATGAAA.................................................................................................................. 25 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................AAGCAATACCTTTCGAACACATG..................................................................................................................... 23 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGTATTATCTACAAA............................................................................ 26 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................AGTAGTACCTTTCGAACACA....................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................AGCAATACCTTTCGAACACATG..................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCCTCAGGTATTATCT................................................................................. 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................GTTCGTCAGGTATTATCTA................................................................................ 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................ATGATTTCGTCAGGTATTATC.................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGTTATTATCT................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGTATTATCTAAAAA............................................................................ 26 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCCGGTCTTATCTAA............................................................................... 23 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
.................................................................................AGTAATACCTTTCGAACGCATGT.................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................AGTAATGCCTTTCGAACACATG..................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................AGTAATACATTTCGAACACATGA.................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
......................................................................................................................TGAGTTCGTCAGGCATTATC.................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................TATCTTGCAGTAATT............................................................................................................................................ 15 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCATCAGGTATTATCG................................................................................. 22 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................AGTGATATTTTTCGAACACATGA.................................................................................................................... 23 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1
......................................................................................................................TGAGTTCGTCAGGTATTC.................................................................................... 18 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGTACA..................................................................................... 18 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGAGTTCGTCAGGTAGT..................................................................................... 17 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................TCTCTACTTCATTGGTTG................................................................................................................................................................... 18 2 11 0.18 2 0 0 0 0 0 0 0 2 0 0 0 0
.......................................................................................................................................................CATGCAACTCGTTGGCCGAT................................................. 20 3 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................CGTCAGGTATTATCTAAAA............................................................................. 19 3 17 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................ATGAGTTCGTCAGGTGCCA.................................................................................... 19 3 18 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................TAGTTATTGTAAACC................................................................... 15 1 19 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................TAGTTATTGTAAAGA................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................GTAGGGTTCGAGCGT................. 15 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

GCCATTCACAGATAAATACGCTCGAATCGTACATCACAAGTAATTCCTCATCCGCCAGCGAGTTGAATGTTTACAATAACTAGATAATACCTGACGAACTCATGAATGACTGAAAATCATGTGTTCGAAAGGTATTACTAAATTACTGCAAGATATCATATGCAAAGCAATGAAGTAGAGAGTAGAAGCCATTCACATTCACTCACCGAGTTGACGACTC
******************************************************************....(((((((((((..(((((((((..(((((.(((((...........))))).)))))..)))))))))..)))))))))))...****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body
 SRR553487
Ovary		 SRR553488
Ovary		 SRR618934
Ovary
.................................................................................AGATAATACCTGACGAACTCA...................................................................................................................... 21 0 1 7.00 7 4 1 2 0 0
........................................................................................................................GTGTTCGAAAGGTATTACT................................................................................. 19 0 1 2.00 2 2 0 0 0 0
.........................................................................................................................TGTTCGAAAGGTATTACTAAAT............................................................................. 22 0 1 1.00 1 0 0 0 1 0
..............................................................................................................................................TTAATGCAAGATATCATATGA......................................................... 21 2 1 1.00 1 0 0 0 0 0
...........................................................................................................................................................................GAAGTAGAGAGTAGAAGC............................... 18 0 1 1.00 1 0 0 0 0 1
.......................................................................................................................TGTGTTCGAAAGGTATTACT................................................................................. 20 0 1 1.00 1 0 1 0 0 0
.................................................................................AGATAATACCTGACGGACTCA...................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.........................................................................................................................TGTTCGAAAGGTATTACTAAAAA............................................................................ 23 2 1 1.00 1 0 0 1 0 0
................................................................................................................................................................TGCAGAGTGATGAAGTAGAGAG...................................... 22 3 2 0.50 1 0 0 0 0 0
................................................................................................................................................................TGCAAAGGAATGAAGTAGG......................................... 19 2 2 0.50 1 0 0 0 0 0
................................................................................................................................................................TGAAATGCAAAGAAGTAGAGAG...................................... 22 3 4 0.25 1 0 0 0 0 0
....................................................................................CAAGACCTGACGAACTC....................................................................................................................... 17 2 7 0.14 1 0 0 1 0 0
................................................................................................................................................................TGGAAAGGAATGAAGTAGGG........................................ 20 3 16 0.06 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 X:3277284-3277503 - dsi-mir-983 GAGTCGTC-AACTCGGTGAGTGAAT----GTGAATGGCTTCTACTCTCTACTTCATTGCTTTGCATATG---ATATCTTGCAGTAATTTAGTAATACCTTTCGAACACATGATTTTCAG-TCATTCATGAGTTCGTCAGGTATTATCTAGTTATTGTAAACATTCAACTCGCTGGCGGATGAGGAATTACTTGTGATGTACGATTCGAGCGTATTTA-----------------TCTGT----------GAATGGC
droSec2 scaffold_4:2462159-2462378 + dse_50 GAGTCGTC-AACTCGGTGAGTGAAT----GTGAATGGCTTCTACTATCTACTTCATTGCTTTGCATATG---ATATGTTGCAGTAATTTAGTAATACCTTTCGAACATATGATTTTCAG-TCATTCATGAGTTCGTTAGGTATTATCTAGTTATTGTAAACATTCAACTCGCTGGCGGATGAGGAATTACTTGTGATGTACGATTCGAGCGTATTTA-----------------TCTGT----------GAATGGC
dm3 chrX:4262458-4262623 - dme-mir-983-2 TGC-------------------------------------------------------------ATATGCTATTATATTGCAATAATTAAATAATACGTTTCGAACTAATGATTTTCAGTTCATTCATTAGGTAGTTACGCATTATCTAGTTGTTGTAAACATTCAACTCGATGGCGGATGAGAAATTACTTATGATGTACCATTCTT--GTAATAA-----------------ACTGT----------GTGTGTA
droEre2 scaffold_4690:1633035-1633280 - der_169 GAGTCTTGTAAATGTACAAACAAATCTCAGTGTATAGCTTAAA---TCCACCGGAATT------GTGTGATATTATGTTACAGTGATTTAATAATTCGATTCGAAGTTATGTGCTTTAA-TCATTCATAAATGCGAAACGGATTATTAAGTTATTGTTAACATTCAACTCGTTGGCGTGTGAGAAATTGCTCATGATATGCGATTCGGAACCATTCACTGCTGTTTTTCAATTTTCAGTGAATGATATCGAATGGC
droEug1 scf7180000409076:263331-263342 - TAGTAACC-AACT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301703:494650-494676 + GATTAGTT-AAT-CGGCTGTTAAAC----GTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491011:2112058-2112076 + AATTC---------AGCGAGGGTAT----GT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12928:5270673-5270692 - TAGTT---------CATGAATGATT----GCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6359:3791311-3791313 - GAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
GAGTCGTC-AACTCGGTGAGTGAAT----GTGAATGGCTTCTACTCTCTACTTCATTGCTTTGCATATG---ATATCTTGCAGTAATTTAGTAATACCTTTCGAACACATGATTTTCAG-TCATTCATGAGTTCGTCAGGTATTATCTAGTTATTGTAAACATTCAACTCGCTGGCGGATGAGGAATTACTTGTGATGTACGATTCGAGCGTATTTA-----------------TCTGT----------GAATGGCSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
..............................................................................................................................ATGAGTTCGTCAGGTATTATCT............................................................................................................2212257.002257010012293943973122214383
.........................................................................................AGTAATACCTTTCGAACACATG.................................................................................................................................................2211725.0017258243310691691741931016839
.........................................................................................AGTAATACCTTTCGAACACATGA................................................................................................................................................2311089.00108952282669417712392432527
.........................................................................................AGTAATACCTTTCGAACACA...................................................................................................................................................201930.009300212087227232532
...............................................................................................................................TGAGTTCGTCAGGTATTATCT............................................................................................................211806.008062273405722781332517960
.........................................................................................AGTAATACCTTTCGAACACAT..................................................................................................................................................211755.0075509276660161138843
..............................................................................................................................ATGAGTTCGTCAGGTATTATC.............................................................................................................211625.006251253536310810543062
...............................................................................................................................TGAGTTCGTCAGGTATTATCTA...........................................................................................................221528.00528151326817450393425738
.........................................................................................AGTAATACCTTTCGAACAC....................................................................................................................................................191232.0023200102281002000
.........................................................................................AGTAATACCTTTCGAACA.....................................................................................................................................................181193.0019300001856001001
..............................................................................................................................ATGAGTTCGTCAGGTATTA...............................................................................................................191134.0013400301300000001
...............................................................................................................................TGAGTTCGTCAGGTATTA...............................................................................................................181118.0011800001171000000
...............................................................................................................................TGAGTTCGTCAGGTATTATC.............................................................................................................201116.0011614315631013007
.........................................................................................AGTAATACCTTTCGAACACATGAT...............................................................................................................................................24153.00530260383010210
..............................................................................................................................ATGAGTTCGTCAGGTATT................................................................................................................18131.00310031240000003
..............................................................................................................................ATGAGTTCGTCAGGTATTAT..............................................................................................................20131.00310040211003101
...............................................................................................................................TGAGTTCGTCAGGTATTAT..............................................................................................................19126.00260000230000102
..............................................................................................................................ATGAGTTCGTCAGGTATTATCTA...........................................................................................................23124.0024009110013513
...............................................................................................................................TGAGTTCGTCAGGTA..................................................................................................................15110.00100000000000010
..........................................................................................GTAATACCTTTCGAACACATGA................................................................................................................................................2218.008000060110000
.............................................................................................ATACCTTTCGAACACATG.................................................................................................................................................1816.006000000010005
..................................................................................................................................GTTCGTCAGGTATTATCT............................................................................................................1816.006000000000006
..........................................................................................GTAATACCTTTCGAACACATG.................................................................................................................................................2115.005000020003000
................................................................................................................................GAGTTCGTCAGGTATTATCT............................................................................................................2015.005000050000000
..............................................................................................................................ATGAGTTCGTCAGGTA..................................................................................................................1615.005000000000005
..............................................................................................................................ATGAGTTCGTCAGGT...................................................................................................................1514.004000000000004
..........................................................................................GTAATACCTTTCGAACACATGAT...............................................................................................................................................2313.003001020000000
................................................................................................................................GAGTTCGTCAGGTATTATC.............................................................................................................1912.002000010000001
.............................................................................................ATACCTTTCGAACACATGA................................................................................................................................................1912.002000010100000
.................................................................................................................................AGTTCGTCAGGTATTATCT............................................................................................................1912.002000110000000
............................................................................................AATACCTTTCGAACACATG.................................................................................................................................................1912.002000000000002
................................................................................................CCTTTCGAACACATGA................................................................................................................................................1612.002000000000002
...............................................................................................................................TGAGTTCGTCAGGTATTATCTAG..........................................................................................................2312.002001010000000
............................................................................................AATACCTTTCGAACACATGA................................................................................................................................................2012.002000000000002
...............................................................................................................................TGAGTTCGTCAGGTATT................................................................................................................1712.002000000000002
.............................................................................................ATACCTTTCGAACACA...................................................................................................................................................1611.001000000000001
...............................................................................................................................TGAGTTCGTCAGGTATTATCTAGT.........................................................................................................2411.001000000010000
................................................................................................................................GAGTTCGTCAGGTATTATCTA...........................................................................................................2111.001000010000000
....................................................................................................................................TCGTCAGGTATTATCT............................................................................................................1611.001000000000001
..........................................................................................GTAATACCTTTCGAACACAT..................................................................................................................................................2011.001000010000000
...............................................................................................ACCTTTCGAACACATGA................................................................................................................................................1711.001000000000001
.........................................................................................AGTAATACCTTTCGAA.......................................................................................................................................................1611.001000000000001
....................................................................................................................................TCGTCAGGTATTATCTA...........................................................................................................1711.001000000000001
................................................................................................................TTTTCAG-TCATTCATGAGTTCGTCAGG....................................................................................................................2711.001000000000100
...........................................................................................TAATACCTTTCGAACACATGA................................................................................................................................................2111.001000010000000
.........................................................................................AGTAATACCTTTCGA........................................................................................................................................................1511.001000000010000
........................................................................................TAGTAATACCTTTCGAACAC....................................................................................................................................................2011.001000010000000
..................................................................................................................................GTTCGTCAGGTATTATCTA...........................................................................................................1911.001000000000001
.........................................................................TATCTTGCAGTAATT........................................................................................................................................................................1520.501000000000001
droSec2
GAGTCGTC-AACTCGGTGAGTGAAT----GTGAATGGCTTCTACTATCTACTTCATTGCTTTGCATATG---ATATGTTGCAGTAATTTAGTAATACCTTTCGAACATATGATTTTCAG-TCATTCATGAGTTCGTTAGGTATTATCTAGTTATTGTAAACATTCAACTCGCTGGCGGATGAGGAATTACTTGTGATGTACGATTCGAGCGTATTTA-----------------TCTGT----------GAATGGCSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
...............................................................................................................................TGAGTTCGTTAGGTATTATCT............................................................................................................211361.00361225233083
...............................................................................................................................TGAGTTCGTTAGGTATTATCTA...........................................................................................................221224.00224134101763
..............................................................................................................................ATGAGTTCGTTAGGTATTATCT............................................................................................................22165.0065512210
.........................................................................................AGTAATACCTTTCGAACATATG.................................................................................................................................................22132.003261025
...............................................................................................................................TGAGTTCGTTAGGTATTATC.............................................................................................................20132.003226141
...............................................................................................................................TGAGTTCGTTAGGTATTATCTAG..........................................................................................................23123.002322010
...............................................................................................................................TGAGTTCGTTAGGTATTATCTAGT.........................................................................................................24119.00195059
.........................................................................................AGTAATACCTTTCGAACATATGA................................................................................................................................................23118.001800018
..............................................................................................................................ATGAGTTCGTTAGGTATTATC.............................................................................................................21112.00128121
.........................................................................................AGTAATACCTTTCGAACATAT..................................................................................................................................................2116.0064011
.......................................................................................TTAGTAATACCTTTCGAACATA...................................................................................................................................................2215.0051004
................................................................................................................................GAGTTCGTTAGGTATTATCT............................................................................................................2015.0050005
..............................................................................................................................ATGAGTTCGTTAGGTATTAT..............................................................................................................2014.0044000
...............................................................................................................................TGAGTTCGTTAGGTATTAT..............................................................................................................1913.0032100
........................................................................................TAGTAATACCTTTCGAACATAT..................................................................................................................................................2213.0030003
.................................................................................................................................AGTTCGTTAGGTATTATCTAG..........................................................................................................2113.0033000
.................................................................................................................................AGTTCGTTAGGTATTATCTAGT.........................................................................................................2213.0032001
................................................................................................................................GAGTTCGTTAGGTATTATCTAG..........................................................................................................2212.0021001
..........................................................................................GTAATACCTTTCGAACATATG.................................................................................................................................................2112.0020002
.......................................................................................TTAGTAATACCTTTCGAACAT....................................................................................................................................................2111.0010010
..........................................................................................GTAATACCTTTCGAACATAT..................................................................................................................................................2011.0010001
..............................................................................................................................ATGAGTTCGTTAGGTATTA...............................................................................................................1911.0010010
.......................................................................................TTAGTAATACCTTTCGAACA.....................................................................................................................................................2011.0010001
...............................................................................................................................TGAGTTCGTTAGGTATTATCTAGTT........................................................................................................2511.0011000
................................................................................................................................GAGTTCGTTAGGTATTATCTA...........................................................................................................2111.0010001
.........................................................................................AGTAATACCTTTCGAACATA...................................................................................................................................................2011.0010001
droEre2
GAGTCTTGTAAATGTACAAACAAATCTCAGTGTATAGCTTAAA---TCCACCGGAATT------GTGTGATATTATGTTACAGTGATTTAATAATTCGATTCGAAGTTATGTGCTTTAA-TCATTCATAAATGCGAAACGGATTATTAAGTTATTGTTAACATTCAACTCGTTGGCGTGTGAGAAATTGCTCATGATATGCGATTCGGAACCATTCACTGCTGTTTTTCAATTTTCAGTGAATGATATCGAATGGCSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
.................................................................................................................................AATGCGAAACGGATTATTAAG..........................................................................................................2113196.0031962132852307220
.................................................................................................................................AATGCGAAACGGATTATTAAGT.........................................................................................................2212871.0028711382547271284
......................................................................................................................................................................................................TGCGATTCGGAACCATTCACTG....................................2212215.0022152191995115822
......................................................................................................................................................................................................TGCGATTCGGAACCATTCACT.....................................211622.006220453856222
.................................................................................................................................AATGCGAAACGGATTATTAAGTT........................................................................................................231139.00139001281100
.................................................................................................................................AATGCGAAACGGATTATTAA...........................................................................................................202127.50255022232730
......................................................................................................................................................................................................TGCGATTCGGAACCATTCAC......................................20173.00730167230
...............................................................................................................................TAAATGCGAAACGGATTATTAA...........................................................................................................22148.00480040800
................................................................................................................................AAATGCGAAACGGATTATTAAG..........................................................................................................22141.00411034510
...............................................................................................................................TAAATGCGAAACGGATTATTAAG..........................................................................................................23137.00370131500
.......................................................................................TTAATAATTCGATTCGAAGTTA...................................................................................................................................................22132.00320026231
......................................................................................................................................................................................................TGCGATTCGGAACCATTCA.......................................19131.00310028300
..................................................................................................................................ATGCGAAACGGATTATTAAGT.........................................................................................................21121.00210019020
..................................................................................................................................ATGCGAAACGGATTATTAAG..........................................................................................................20112.0012008220
.................................................................................................................................AATGCGAAACGGATTATTAAGTTA.......................................................................................................2417.007006100
.......................................................................................................................................................................................................GCGATTCGGAACCATTCACTG....................................2115.005001040
...............................................................................................................................TAAATGCGAAACGGATTATTA............................................................................................................2114.004004000
.................................................................................................................................AATGCGAAACGGATTATTA............................................................................................................1924.008006110
.................................................................................................................................AATGCGAAACGGATTATT.............................................................................................................1823.507000610
...............................................................................................................................TAAATGCGAAACGGATTATT.............................................................................................................2013.003001110
................................................................................................................................AAATGCGAAACGGATTATTAA...........................................................................................................2122.505004100
........................................................................................................................................................................................................CGATTCGGAACCATTCACTG....................................2012.002001010
................................................................................................................................AAATGCGAAACGGATTATTAAGT.........................................................................................................2312.002001100
....................................................................................................................................GCGAAACGGATTATTAAG..........................................................................................................1812.002002000
...................................................................................................................................TGCGAAACGGATTATTAAGT.........................................................................................................2012.002002000
...............................................................................................................................TAAATGCGAAACGGATTATTAAGT.........................................................................................................2412.002002000
...................................................................................................................................TGCGAAACGGATTATTAAG..........................................................................................................1912.002002000
.........................................................................................................................................................................................................GATTCGGAACCATTCACTG....................................1912.002001010
.................................................................................................................................AATGCGAAACGGATTATTAAGTTAT......................................................................................................2511.001001000
.......................................................................................TTAATAATTCGATTCGAAGTTATGTGCTT............................................................................................................................................2911.001000010
......................................................................................................................................................................................................TGCGATTCGGAACCATTCACTGC...................................2311.001001000
.......................................................................................TTAATAATTCGATTCGAAGTTAT..................................................................................................................................................2311.001001000
.........................................................................................................................................................................................................GATTCGGAACCATTCACT.....................................1811.001001000
.........................................................................................AATAATTCGATTCGAAGTT....................................................................................................................................................1911.001000010
......................................................................................................................................................................................................TGCGATTCGGAACCATTCACTGCT..................................2411.001001000
........................................................................................................................................................................................................CGATTCGGAACCATTCACT.....................................1911.001000100
................................................................................................................................AAATGCGAAACGGATTATT.............................................................................................................1920.501001000
................................................................................................................................AAATGCGAAACGGATTATTA............................................................................................................2020.501010000
droEug1
TAGTAACC-AACT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GATTAGTT-AAT-CGGCTGTTAAAC----GTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AATTC---------AGCGAGGGTAT----GT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droVir3
TAGTT---------CATGAATGATT----GCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalV116
Male-body		V053
Head		V047
Embryo		M027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis
No Reads
droMoj3
GAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalV110
Male-body		V056
Head		V049
Head		V041
Embryo		M046
Female-body		M060
Embryo
No Reads

Generated: 12/06/2013 at 02:42 PM