dsi-mir-969

GAAAGTGTGCAAGTGATGTCAGTGCAACGTCGTCATCAGTGGCGTTCGGGGAATCCCCAAGTCTCTGTCCTACGTCCGAGTTCCACTAAGCAAGTTTTGAGATCGTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGGACTACTGCAATTCAAAATCCAGTTGCTACTAAATTTAAGTTCCATGCCAAGTGTTCTATAAGT ************************************************************.(((((((((((..(((((((.((....((((((((..................))))))))....)).)))))))..)))))))))))...*********************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M023 head	M025 embryo	O002 Head	M024 male body	SRR553488 Ovary	M053 Female-body	GSM343915 embryo	SRR553487 Ovary	SRR553486 Ovary	O001 Testis	SRR618934 Ovary	SRR553485 Ovary
......................................................................................................................AACTTGACACGTTGAGCTCGT..........................................................................	21	0	1	891.00	891	598	250	5	11	8	5	4	4	3	0	2	1
......................................................................................................................AACTTGACACGTTGAGCTCGG..........................................................................	21	1	1	104.00	104	54	48	0	2	0	0	0	0	0	0	0	0
......................................................................................................................AACTTGACACGTTGAGCTCG...........................................................................	20	0	1	57.00	57	39	13	2	3	0	0	0	0	0	0	0	0
.............................................................................GAGTTCCACTAAGCAAGTTTT...................................................................................................................	21	0	1	51.00	51	2	0	46	0	0	1	1	0	0	1	0	0
......................................................................................................................AACTTGACACGTTGAGCTCGC..........................................................................	21	1	1	36.00	36	26	9	0	1	0	0	0	0	0	0	0	0
.............................................................................GAGTTCCACTAAGCAAGTTT....................................................................................................................	20	0	1	33.00	33	1	0	32	0	0	0	0	0	0	0	0	0
.............................................................................GAGTTCCACTAAGCAAGT......................................................................................................................	18	0	1	30.00	30	0	0	29	0	0	0	0	0	0	1	0	0
.....................................................................................................................AAACTTGACACGTTGAGCTCG...........................................................................	21	0	1	5.00	5	3	1	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................TCGTGGGATGGACTACTGC.......................................................	19	0	1	4.00	4	1	0	3	0	0	0	0	0	0	0	0	0
.............................................................................GAGTTCCACTAAGCAAGTT.....................................................................................................................	19	0	1	4.00	4	0	0	4	0	0	0	0	0	0	0	0	0
................................................................................................TTGAGATCGTTTTAAAAACAAAAACT...........................................................................................	26	0	1	3.00	3	3	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................AACTTGACACGTTGAGCTC............................................................................	19	0	1	3.00	3	2	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................AACTTGACACGTTGATCTCG...........................................................................	20	1	1	3.00	3	3	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................AACTTGACACGTTGATCTCGT..........................................................................	21	1	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................AAACTTGACACGTTGAGCTCGT..........................................................................	22	0	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................AACTCGACACGTTGAGCTCGT..........................................................................	21	1	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................AACTTGACACGTTGAGCTCGTT.........................................................................	22	0	1	2.00	2	1	0	0	0	0	0	1	0	0	0	0	0
....................................................................................................................AAAACTTGACACGTTGAGCTC............................................................................	21	0	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................AACTTGACACGTTGGGATCGT..........................................................................	21	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................AACTTGACACGTTGCGCTCGT..........................................................................	21	1	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0
................................................................................................TTGAGATCGTTTTAAAAACAA................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................TCGTGGGATGGACTACTGCA......................................................	20	0	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................AACTTGACACGTTGAGCTCGTTT........................................................................	23	1	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................AACTTGACACGTTGAGCTCAT..........................................................................	21	1	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................TCGTGGGATGGACTACTGCAA.....................................................	21	0	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0
.............................................................................GAGTTCCACTAAGCAAGTTTTC..................................................................................................................	22	1	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0
....................................................................................................................AAAACTTCACACGTTGAGCTC............................................................................	21	1	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................AACTTGACACGTTGATCTCGC..........................................................................	21	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
......................TGCAACTTCTTCATCAGTGGCC.........................................................................................................................................................................	22	3	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0
....................................................................................................................AAAACTTGACACGTTGAGCTCG...........................................................................	22	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................AACTTGACACGGTGAGCTCGT..........................................................................	21	1	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................AACTGACACGTTGAGCTCGT..........................................................................	20	2	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0
......................................................................................................................AACTTGACACTTTGAGCTCGT..........................................................................	21	1	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
...........................................................................CCGTGGTCCACTAAGCAAGTTT....................................................................................................................	22	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
.............................................................................CAGTTCCACTAAGCAAGTTTT...................................................................................................................	21	1	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................TTTGAGATCGTTTTAAAA....................................................................................................	18	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................AAACTTGACACGTTGAGCTC............................................................................	20	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................AACTTGACACGTTGAGCGCGT..........................................................................	21	1	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................AACTTGACACGTTGAGCTCGTAA........................................................................	23	2	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0
......................................................................................................................AACTTTACACGTTGAGCTCGT..........................................................................	21	1	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0
......................................................................................................................TACTTGACACGTTGAGCTCGT..........................................................................	21	1	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0
................................................................................................TAGAGGTCGTTTTAAAAAAAAAAA.............................................................................................	24	3	2	0.50	1	0	0	0	0	1	0	0	0	0	0	0	0
......................................................................................................................AACTTGACACGTTGAGCTCGTAAA.......................................................................	24	3	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................TGAGATCGTTTTAAAAGCT.................................................................................................	19	2	5	0.20	1	0	0	0	0	0	0	0	0	0	0	1	0
...............................................................................................TTTGAAATCGGTTTAAAAAAAAAAA.............................................................................................	25	3	5	0.20	1	0	0	0	0	0	0	0	0	1	0	0	0
.................................................................................................TGAGATCATTTTAAAAA...................................................................................................	17	1	7	0.14	1	0	0	0	0	0	0	0	0	0	0	1	0
..............................................................................................TCTAGAGGTCGTTTTAAAAA...................................................................................................	20	3	8	0.13	1	0	0	0	0	0	0	0	0	1	0	0	0
.................................................................................................TGAGATCATTTTAAAAACT.................................................................................................	19	2	13	0.08	1	0	0	0	0	0	0	0	0	0	0	1	0
..........................TCGTCGTCATCAGTGGCGGTG......................................................................................................................................................................	21	3	15	0.07	1	0	0	0	0	0	0	0	0	0	0	1	0
...............................................................................................TTCGAGAGCGTTTTAAAA....................................................................................................	18	2	18	0.06	1	0	0	0	0	1	0	0	0	0	0	0	0
.......................................................................................................................AACTGACACGTTGAGCTCGG..........................................................................	20	3	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0	0
................................TCCTTAGTGGCGTACGGG...................................................................................................................................................................	18	3	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0	0
.........................AACGTCGTCTTCAGCGG...........................................................................................................................................................................	17	2	20	0.05	1	0	0	0	0	0	0	0	0	0	0	1	0
.......................................................................................AGCCAAGTTTTGATATCGT...........................................................................................................	19	3	20	0.05	1	0	0	0	1	0	0	0	0	0	0	0	0

ACTTATAGAACACTTGGCATGGAACTTAAATTTAGTAGCAACTGGATTTTGAATTGCAGTAGTCCATCCCACGAACGAGCTCAACGTGTCAAGTTTTTGTTTTTAAAACGATCTCAAAACTTGCTTAGTGGAACTCGGACGTAGGACAGAGACTTGGGGATTCCCCGAACGCCACTGATGACGACGTTGCACTGACATCACTTGCACACTTTC *********************************************************...(((((((((((..(((((((.((....((((((((..................))))))))....)).)))))))..))))))))))).************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M023 head
.....................................................................................................................AACTTGCTTAGTGGAACTCGGA..........................................................................	22	0	1	1.00	1	1
.......................................................................................................................................................................ACCGCCACTGATGACGAC............................	18	1	2	0.50	1	0
.................................................................................................................................................................................TTGACGACGTTGCACTGCT.................	19	3	20	0.15	3	0
..................................................................................................................................................................................TGACGACGTTGCACTGCTGT...............	20	3	7	0.14	1	0
...................................................AATTGCACTAGTCCAGACCA..............................................................................................................................................	20	3	7	0.14	1	0
.........................................................................................................................................GAGGTAGGACAGAGA.............................................................	15	1	11	0.09	1	0

Species	Coordinate	ID	Alignment
droSim3	chrU_M_7032:204-416 +	dsi-mir-969	GAAAGTGTG--CAAGTGATG------------------T-C----------------------------------------------------AGTGCAACGTCGTCATCAGTGGCGTT--CGGGGAATC------CCC---AAG--------------------------------T--CTCTGTCCTACGTCCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGG-ACTACTGCAATTC--A----AAA------TCCAGTTGCTACTAAATTT---AAGTTCCATGCCAAGTGTTC--TATAAGT-----
droSec2	scaffold_8:326530-326727 +	dse_88	GAAAGTGTG--CAAGTGATG------------------T-C----------------------------------------------------AGTGCAACGTCGTCATCAGTGGCGTT--CGAGGAATC------CCC---AAG--------------------------------T--CTCTGTCCTACGTCCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGG-ACTACTG---------------------------TTGCTACTAAATAT---AAGTTCTATGCCATGTGTTC--TATAAGT-----
dm3	chrX:18018331-18018543 +	dme-mir-969	GGAAGTGTG--CAAGTGATG------------------T-C----------------------------------------------------AGTGCAACGTCGTCATTAGTGGCATT--CGGTGAATC------CCC---AAG--------------------------------T--CTCTGTCCTACGTCCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGG-ACTACTGCAATTC--G----AAA------TCCAGTTGCTACTTAATTT---AAGTTCTATGCCATGTGTTG--TGTAAGT-----
droEre2	scaffold_4690:8345965-8346175 +	der_63	GACTGTGTG--CAAGTGATG------------------T-C----------------------------------------------------AGTTCAACAACGTCATGAGTTGCGTT--TGGGAAGTT------CCC---AAA--------------------------------T--CTCTGTCCTACGTCCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGG-ATTACTGC----C--G----AAA------GCCAGTTGCAACTAAATTAAA-AAGTTCTATACCATGTGTGT--TATTAGT-----
droYak3	X:16642267-16642480 +	dya_48	GAAAGT--G--CAAGTGATG------------------T-C----------------------------------------------------AGTTCAAAATCGTCATCAGTGGTGTT--CGGGGTATC------CCC---AAA--------------------------------C--CTCTGTCCTACGTCCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTTGTGGGATGG-TCTACCGCAATTC--G----AAA------GACAGTTGTAACTTAATTAAAAAAGTTCCATAGCATGTGTGT--TAATAGT-----
droEug1	scf7180000408176:664476-664684 -		AAAAGTGTG--AAAGTGA-G-----------A-AAGAGT-----------------------------------------------------AAGTTG------------AGCAGCTTTC-TGGGGAATC------CCCCTGAAA--------------------------------TCTCTCTGTTCTACGTGCGAGTTCCACTAAGCAAGTTTTGAGATCGTTTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGG-ACTTCATCAGCTT--G----AAA------GCCTGCTTAAAATAAACTAAGAATGA-T--TATAAAGTTTTT--TA----------
droBia1	scf7180000301760:584961-585137 -		AAAATAGTGCTTAAGTGCTG--------------------------------------------------------------------CAGTAAGTTCTACAATGTCAT--------------GGGAATCTCTGCTCCG---CAA--------------------------------T--AGCTGTGCCACGTCCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAATACTAAAACTTGACACGTTGAGCTCGTTTGTGGCTTGG-CCC----CACTTC-------AAA------ACCAATTTCAACTAAA----------------------------------------
droTak1	scf7180000415843:458239-458375 -		AAAAGTGTT--CTAGTGAAGCCTCGAAC--------------TCATCAA--------------CCTACAGCA----------------------------------------------------------------TCG---AAT--------------------------------A--CTCTGTCCTACGTGCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGAATGG--------------------------------------------------------------------------------------
droEle1	scf7180000491193:225571-225724 +		AAAAGTGAA--G----------------------------------------------------------------------------AAGTAAGTTCCA------------TCGATGTCACGGGTAATC------TCCCAAAAA--------------------------------T--CTCTGTCCTACGTACGAGTTCCACTAAGCAAGTTTTGAGATCGT-TTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGG-ACAACTTCAGTTT--A----A----------------------------------------------------------------
droRho1	scf7180000779986:498588-498750 -		AAAAGTGAG--CA--------------GCAAGT-------------T--------------------------------------AAGAAGTATGTTCTTTGACGTC-----------G--CTGGGAATC------CCC--GAAA--------------------------------T--CTCTGTCCTACGTACGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAATACAAAAACTTGACACGTTGAGCTCGTTTGTGGGACGG-GCTACTTCAATTC--A----AAA--------------------------------------------------------------
droFic1	scf7180000453872:337473-337692 -		G------TG--CAAGTGATG-----A-AGAAGT-------------G--------------------------------------AAGCAGTTGGCTCAGCGATGGC-----------A--CGGGGAGTC------CCC---GAA------------------------TTCCCGGTT--CCCTGTTCTACGTGCGAGTTCCACTAGGCAAGTTTTGAGATCGTTTTTAAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGG-ACAACTCCAGCTTTCGCAAGAAATCAACAA-CAGTT--------------------TTAAA--AAGTGTTTCAAGTAAGTACCGA
droKik1	scf7180000302696:1720040-1720246 +		AGA---GTG--TCAGTGA-G----------------------TT-------------------CTTACAGTATAACTTTATATTTAAGATGTAAGTACAATAA--------------------GTGAA-A------GTG---AAG--------------------------------A--CTCTGAGCTACGCGCGAGTTCCACTAAGCAAGTTTTGAGAAT--ATTTC-AATACAAAAACTTGACACGTTGAGCTCGTTTGTGGGGTCAGACAAAAGCAA-----------------CAATCAGTTAATAAAAAAATA---AACCTTCA---------ACT--AATAAGT-----
droAna3	scaffold_13335:1607989-1608076 -	dan_60	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGTTTTACGTGCGAGTTCCACTAAGCAAGTTTTGAGAAT--TTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTCCGTGGGGCAG-A------------------------------------------------------------------------------------
droBip1	scf7180000395454:59944-60031 +		-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGTTTTACGTGCGAGTTCCACTAAGCAAGTTTTGAGAAT--TTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTCCGTGGGGCAG-A------------------------------------------------------------------------------------
dp5	XL_group3a:1977519-1977620 -	dps-mir-969	TTC---CTG--GAA-------------G--------------CCAT-------------------------------------------------------------------------------------------CT---AGG--------------------------------A--GCCTGTTCTACGTGCGAGTTCCACCATGCAAGTTTTGAG--CGTATA-TGAATCCAAAAACTTGACACGTTGAGCTCGTGCGTGG-------------------------------------------------------------------------------------------
droPer2	scaffold_11:2701270-2701371 +	dpe_84	TTC---CTG--GAA-------------G--------------CCAT-------------------------------------------------------------------------------------------CT---AGG--------------------------------A--GCCTGTTCTACGTGCGAGTTCCACCATGCAAGTTTTGAG--CGTATA-TGAATCCAAAAACTTGACACGTTGAGCTCGTGCGTGG-------------------------------------------------------------------------------------------
droWil2	scf2_1100000004909:12029350-12029484 +	dwi_49	AT----GTG---AAGTGATG------------------A-A----------------------------------------------------ATTGAAAAGAAATTGAAAGTTACGTT--T---------------------AT--------------------------------A--TCCTGTCCTACGCATGAGTTCCACTAAGCAAGTTTTGGGCAT--ATTTCAAAAACAAAAACTTGACACGTTGAGCTCGTCTGTGTGACAG-A------------------------------------------------------------------------------------
droVir3	scaffold_12928:1264100-1264263 -	dvi_69	AAGTGTATC------------------GCCAT-CTGAGTAAGTTGATATCGAAATTGAAATTTCATGTGGT----------------------------------------GTCGCTTT--CAAGAGCAG------CTC---GCG--------------------------------C--TTCTGCCCTACGCACGAGTTCCACTAATCAAGTTTTGAGCGG--ATTCGAAAGTCGAAAACTTGACACGTTGAGCTCGTCCGTGGGGCGG--------------------------------------------------------------------------------------
droMoj3	scaffold_6473:13724256-13724395 +	dmo_81	AAGAGATGG--CT----------------------GGGTAAGTTGC-------------------------------------------------------------------------------------------TC---AAGAGCCCAATCCTTATCCATACCATATCCACATTT--GGCTGTCCTACGAGCGAGTTCCACTAATCAAGTTTTGAG--T--GTTCGAAAATCAAAAACTTGACACGTTGAGCTCGTCTGTG--------------------------------------------------------------------------------------------
droGri2	scaffold_15203:8445758-8445849 +	dgr_54	CC--------------------------------------------------------------------------------------------------------------------------------------------GGG--------------------------------T--GTCTGCCACACTTACGAGTTCCACTATTCAAGTTTTGAG--CGTATT-TGAAATCAAAAACTTGACACGTTGAGCTCGTGTGTGCGTTG---------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim3

GAAAGTGTG--CAAGTGATG------------------T-C----------------------------------------------------AGTGCAACGTCGTCATCAGTGGCGTT--CGGGGAATC------CCC---AAG--------------------------------T--CTCTGTCCTACGTCCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGG-ACTACTGCAATTC--A----AAA------TCCAGTTGCTACTAAATTT---AAGTTCCATGCCAAGTGTTC--TATAAGT-----	Size	Hit Count	Total Norm	Total	V044 Embryo	M023 Head	M024 Male-body	M025 Embryo	O001 Testis	O002 Head	M053 Female-body	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCGT.................................................................................................	21	1	891.00	891	4	598	11	250	0	5	5	1	3	4	8	2
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCG..................................................................................................	20	1	57.00	57	0	39	3	13	0	2	0	0	0	0	0	0
...................................................................................................................................................................................................GAGTTCCACTAAGCAAGTTTT............................................................................................................................................	21	1	51.00	51	1	2	0	0	1	46	1	0	0	0	0	0
...................................................................................................................................................................................................GAGTTCCACTAAGCAAGTTT.............................................................................................................................................	20	1	33.00	33	0	1	0	0	0	32	0	0	0	0	0	0
...................................................................................................................................................................................................GAGTTCCACTAAGCAAGT...............................................................................................................................................	18	1	30.00	30	0	0	0	0	1	29	0	0	0	0	0	0
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTCG..................................................................................................	21	1	5.00	5	0	3	0	1	0	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................TCGTGGGATGG-ACTACTGC.............................................................................	19	1	4.00	4	0	1	0	0	0	3	0	0	0	0	0	0
...................................................................................................................................................................................................GAGTTCCACTAAGCAAGTT..............................................................................................................................................	19	1	4.00	4	0	0	0	0	0	4	0	0	0	0	0	0
......................................................................................................................................................................................................................TTGAGATC--GTTTTAAAAACAAAAACT..................................................................................................................	26	1	3.00	3	0	3	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTC...................................................................................................	19	1	3.00	3	0	2	0	0	0	1	0	0	0	0	0	0
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTCGT.................................................................................................	22	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCGTT................................................................................................	22	1	2.00	2	1	1	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................AAAACTTGACACGTTGAGCTC...................................................................................................	21	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................TTGAGATC--GTTTTAAAAACAA.......................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................TCGTGGGATGG-ACTACTGCA............................................................................	20	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................TCGTGGGATGG-ACTACTGCAA...........................................................................	21	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0
............................................................................................................................................................................................................................................AAAACTTGACACGTTGAGCTCG..................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................TTTGAGATC--GTTTTAAAA...........................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTC...................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0

droSec2

GAAAGTGTG--CAAGTGATG------------------T-C----------------------------------------------------AGTGCAACGTCGTCATCAGTGGCGTT--CGAGGAATC------CCC---AAG--------------------------------T--CTCTGTCCTACGTCCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGG-ACTACTG---------------------------TTGCTACTAAATAT---AAGTTCTATGCCATGTGTTC--TATAAGT-----	Size	Hit Count	Total Norm	Total	V113 Male-body	V114 Embryo	V115 Head	M054 Female-body
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCGT.................................................................................................	21	1	114.00	114	23	35	45	11
...................................................................................................................................................................................................GAGTTCCACTAAGCAAGTTTT............................................................................................................................................	21	1	85.00	85	2	0	83	0
...................................................................................................................................................................................................GAGTTCCACTAAGCAAGTTT.............................................................................................................................................	20	1	33.00	33	1	0	32	0
........................................................................................................................................................................................................................GAGATC--GTTTTAAAAACAAA......................................................................................................................	20	1	2.00	2	0	2	0	0
...................................................................................................................................................................................................................................................................TCGTGGGATGG-ACTACTG---------------------------T..................................................	19	1	2.00	2	0	0	2	0
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCGTT................................................................................................	22	1	2.00	2	0	1	1	0
....................................................................................................................................................................................................AGTTCCACTAAGCAAGTTTT............................................................................................................................................	20	1	2.00	2	0	0	2	0
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTCGT.................................................................................................	22	1	2.00	2	0	2	0	0
...................................................................................................................................................................................................GAGTTCCACTAAGCAAGT...............................................................................................................................................	18	1	1.00	1	0	0	1	0
.........................................................................................................................................................................................................................................................TTGAGCTCGTTCGTGGGATGG-.....................................................................................	21	1	1.00	1	0	0	1	0
....................................................................................................................................................................................................AGTTCCACTAAGCAAGTTT.............................................................................................................................................	19	1	1.00	1	0	0	1	0
...................................................................................................................................................................................................................................................................TCGTGGGATGG-ACTACTG---------------------------TT.................................................	20	1	1.00	1	0	0	1	0
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCG..................................................................................................	20	1	1.00	1	0	1	0	0
.................................................................................................................................................................................................................................................TTGACACGTTGAGCTCGTTCGT.............................................................................................	22	1	1.00	1	0	0	1	0
..................................................................................................................................................................................................CGAGTTCCACTAAGCAAGTT..............................................................................................................................................	20	1	1.00	1	0	0	1	0

droEre2

GACTGTGTG--CAAGTGATG------------------T-C----------------------------------------------------AGTTCAACAACGTCATGAGTTGCGTT--TGGGAAGTT------CCC---AAA--------------------------------T--CTCTGTCCTACGTCCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGG-ATTACTGC----C--G----AAA------GCCAGTTGCAACTAAATTAAA-AAGTTCTATACCATGTGTGT--TATTAGT-----	Size	Hit Count	Total Norm	Total	V040 Embryo	V060 Head	V107 Male-body	V108 Head	M055 Female-body	M057 Embryo
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCGT.................................................................................................	21	1	299.00	299	5	26	82	149	27	10
...................................................................................................................................................................................................GAGTTCCACTAAGCAAGTTTT............................................................................................................................................	21	1	217.00	217	0	9	5	197	6	0
...................................................................................................................................................................................................................................................................TCGTGGGATGG-ATTACTGC----.........................................................................	19	1	47.00	47	1	3	0	43	0	0
...................................................................................................................................................................................................GAGTTCCACTAAGCAAGTTT.............................................................................................................................................	20	1	44.00	44	0	3	1	40	0	0
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCG..................................................................................................	20	1	11.00	11	0	0	4	6	1	0
....................................................................................................................................................................................................AGTTCCACTAAGCAAGTTTT............................................................................................................................................	20	1	8.00	8	0	2	0	6	0	0
...................................................................................................................................................................................................................................................................TCGTGGGATGG-ATTACTGC----C--......................................................................	20	1	8.00	8	1	2	0	5	0	0
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCGTT................................................................................................	22	1	7.00	7	0	2	2	2	1	0
...................................................................................................................................................................................................................................................................TCGTGGGATGG-ATTACTGC----C--G----.................................................................	21	1	4.00	4	0	0	1	3	0	0
......................................................................................................................................................................................................................TTGAGATC--GTTTTAAAAACAAAAACT..................................................................................................................	26	1	3.00	3	0	0	0	3	0	0
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTCGT.................................................................................................	22	1	3.00	3	0	0	1	2	0	0
...................................................................................................................................................................................................................................................................TCGTGGGATGG-ATTACTG..............................................................................	18	1	2.00	2	0	0	0	2	0	0
......................................................................................................................................................................................................................TTGAGATC--GTTTTAAAAACAAA......................................................................................................................	22	1	1.00	1	0	0	0	1	0	0
............................................................................................................................................................................................................................................AAAACTTGACACGTTGAGCTCGT.................................................................................................	23	1	1.00	1	0	0	0	1	0	0
...................................................................................................................................................................................................GAGTTCCACTAAGCAAGTT..............................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0
...................................................................................................................................................................................................GAGTTCCACTAAGCAAGTTTTG...........................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................................ACTTGACACGTTGAGCTCGT.................................................................................................	20	1	1.00	1	0	0	0	0	1	0
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTCG..................................................................................................	21	1	1.00	1	0	0	0	0	1	0
........................................................................................................................................................................................................................GAGATC--GTTTTAAAAACAAA......................................................................................................................	20	1	1.00	1	0	0	0	1	0	0
............................................................................................................................................................................................................................................AAAACTTGACACGTTGAGCTCG..................................................................................................	22	1	1.00	1	0	0	0	1	0	0

droYak3

GAAAGT--G--CAAGTGATG------------------T-C----------------------------------------------------AGTTCAAAATCGTCATCAGTGGTGTT--CGGGGTATC------CCC---AAA--------------------------------C--CTCTGTCCTACGTCCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTTGTGGGATGG-TCTACCGCAATTC--G----AAA------GACAGTTGTAACTTAATTAAAAAAGTTCCATAGCATGTGTGT--TAATAGT-----	Size	Hit Count	Total Norm	Total	V046 Embryo	V052 Head	V120 Male-body	V058 Head	M026 Head	M043 Female-body	M056 Embryo
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCGT.................................................................................................	21	1	393.00	393	6	39	12	76	143	17	100
...................................................................................................................................................................................................GAGTTCCACTAAGCAAGTTTT............................................................................................................................................	21	1	61.00	61	0	15	0	42	1	2	1
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCG..................................................................................................	20	1	19.00	19	0	1	0	0	9	1	8
...................................................................................................................................................................................................GAGTTCCACTAAGCAAGTTT.............................................................................................................................................	20	1	9.00	9	0	1	0	8	0	0	0
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCGTT................................................................................................	22	1	9.00	9	1	0	1	1	2	1	3
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTCGT.................................................................................................	22	1	7.00	7	0	1	0	1	3	0	2
...................................................................................................................................................................................................................................................................TTGTGGGATGG-TCTACCGC.............................................................................	19	1	5.00	5	0	2	0	3	0	0	0
............................................................................................................................................................................................................................................AAAACTTGACACGTTGAGCTCG..................................................................................................	22	1	4.00	4	0	0	0	0	4	0	0
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTCG..................................................................................................	21	1	4.00	4	0	0	0	0	4	0	0
......................................................................................................................................................................................................................TTGAGATC--GTTTTAAAAACAAAAACT..................................................................................................................	26	1	3.00	3	0	0	0	0	3	0	0
...............................................................................................................................................................................................................................................ACTTGACACGTTGAGCTCGT.................................................................................................	20	1	3.00	3	0	0	0	0	0	3	0
......................................................................................................................................................................................................................TTGAGATC--GTTTTAAAAACAAA......................................................................................................................	22	1	2.00	2	0	0	0	0	2	0	0
............................................................................................................................................................................................................................................AAAACTTGACACGTTGAGCTC...................................................................................................	21	1	2.00	2	0	0	0	0	2	0	0
..................................................................................................................................................................................................CGAGTTCCACTAAGCAAGTTTT............................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0
......................................................................................................................................................................................................................TTGAGATC--GTTTTAAAAACAA.......................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
......................................................................................................................................................................................................................TTGAGATC--GTTTTAAAAACAAAAAC...................................................................................................................	25	1	1.00	1	0	0	0	0	1	0	0
.....................................................................................................................................................................................................GTTCCACTAAGCAAGTTTT............................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0
........................................................................................................................................................................................................................GAGATC--GTTTTAAAAACAAA......................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTC...................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0
......................................................................................................................................................................................................................TTGAGATC--GTTTTAAAAACA........................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCGTTT...............................................................................................	23	1	1.00	1	0	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................TTGTGGGATGG-TCTACCGCA............................................................................	20	1	1.00	1	0	0	0	1	0	0	0

droEug1

AAAAGTGTG--AAAGTGA-G-----------A-AAGAGT-----------------------------------------------------AAGTTG------------AGCAGCTTTC-TGGGGAATC------CCCCTGAAA--------------------------------TCTCTCTGTTCTACGTGCGAGTTCCACTAAGCAAGTTTTGAGATCGTTTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGG-ACTTCATCAGCTT--G----AAA------GCCTGCTTAAAATAAACTAAGAATGA-T--TATAAAGTTTTT--TA----------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

AAAATAGTGCTTAAGTGCTG--------------------------------------------------------------------CAGTAAGTTCTACAATGTCAT--------------GGGAATCTCTGCTCCG---CAA--------------------------------T--AGCTGTGCCACGTCCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAATACTAAAACTTGACACGTTGAGCTCGTTTGTGGCTTGG-CCC----CACTTC-------AAA------ACCAATTTCAACTAAA----------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AAAAGTGTT--CTAGTGAAGCCTCGAAC--------------TCATCAA--------------CCTACAGCA----------------------------------------------------------------TCG---AAT--------------------------------A--CTCTGTCCTACGTGCGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGAATGG--------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AAAAGTGAA--G----------------------------------------------------------------------------AAGTAAGTTCCA------------TCGATGTCACGGGTAATC------TCCCAAAAA--------------------------------T--CTCTGTCCTACGTACGAGTTCCACTAAGCAAGTTTTGAGATCGT-TTTTAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGG-ACAACTTCAGTTT--A----A----------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

AAAAGTGAG--CA--------------GCAAGT-------------T--------------------------------------AAGAAGTATGTTCTTTGACGTC-----------G--CTGGGAATC------CCC--GAAA--------------------------------T--CTCTGTCCTACGTACGAGTTCCACTAAGCAAGTTTTGAGATC--GTTTTAAATACAAAAACTTGACACGTTGAGCTCGTTTGTGGGACGG-GCTACTTCAATTC--A----AAA--------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droFic1

G------TG--CAAGTGATG-----A-AGAAGT-------------G--------------------------------------AAGCAGTTGGCTCAGCGATGGC-----------A--CGGGGAGTC------CCC---GAA------------------------TTCCCGGTT--CCCTGTTCTACGTGCGAGTTCCACTAGGCAAGTTTTGAGATCGTTTTTAAAAAACAAAAACTTGACACGTTGAGCTCGTTCGTGGGATGG-ACAACTCCAGCTTTCGCAAGAAATCAACAA-CAGTT--------------------TTAAA--AAGTGTTTCAAGTAAGTACCGA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

AGA---GTG--TCAGTGA-G----------------------TT-------------------CTTACAGTATAACTTTATATTTAAGATGTAAGTACAATAA--------------------GTGAA-A------GTG---AAG--------------------------------A--CTCTGAGCTACGCGCGAGTTCCACTAAGCAAGTTTTGAGAAT--ATTTC-AATACAAAAACTTGACACGTTGAGCTCGTTTGTGGGGTCAGACAAAAGCAA-----------------CAATCAGTTAATAAAAAAATA---AACCTTCA---------ACT--AATAAGT-----	Size	Hit Count	Total Norm	Total
No Reads

droAna3

-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGTTTTACGTGCGAGTTCCACTAAGCAAGTTTTGAGAAT--TTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTCCGTGGGGCAG-A------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	V105 Male-body	V106 Head	V055 Head	V039 Embryo	M044 Female-body	M058 Embryo
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCGT.................................................................................................	21	1	153.00	153	24	23	80	3	14	9
...................................................................................................................................................................................................GAGTTCCACTAAGCAAGTTTT............................................................................................................................................	21	1	65.00	65	0	46	15	0	4	0
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCGTC................................................................................................	22	1	22.00	22	4	7	8	0	2	1
..................................................................................................................................................................................................CGAGTTCCACTAAGCAAGTTTT............................................................................................................................................	22	1	13.00	13	0	5	7	0	1	0
...................................................................................................................................................................................................GAGTTCCACTAAGCAAGTTT.............................................................................................................................................	20	1	11.00	11	0	7	4	0	0	0
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCG..................................................................................................	20	1	5.00	5	2	0	2	0	1	0
...............................................................................................................................................................................................................................................ACTTGACACGTTGAGCTCGT.................................................................................................	20	1	3.00	3	0	0	0	0	3	0
....................................................................................................................................................................................................AGTTCCACTAAGCAAGTTTT............................................................................................................................................	20	1	3.00	3	0	0	3	0	0	0
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTCGT.................................................................................................	22	1	2.00	2	1	0	0	0	1	0
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTCG..................................................................................................	21	1	1.00	1	0	0	1	0	0	0
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAG......................................................................................................	17	1	1.00	1	0	0	1	0	0	0
..................................................................................................................................................................................................CGAGTTCCACTAAGCAAGTTT.............................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTC...................................................................................................	19	1	1.00	1	0	0	1	0	0	0
............................................................................................................................................................................................................................................AAAACTTGACACGTTGAGCTCG..................................................................................................	22	1	1.00	1	0	0	1	0	0	0
...................................................................................................................................................................................................GAGTTCCACTAAGCAAGTTTTG...........................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0

droBip1

-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGTTTTACGTGCGAGTTCCACTAAGCAAGTTTTGAGAAT--TTTTTAAAAACAAAAACTTGACACGTTGAGCTCGTCCGTGGGGCAG-A------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

dp5

TTC---CTG--GAA-------------G--------------CCAT-------------------------------------------------------------------------------------------CT---AGG--------------------------------A--GCCTGTTCTACGTGCGAGTTCCACCATGCAAGTTTTGAG--CGTATA-TGAATCCAAAAACTTGACACGTTGAGCTCGTGCGTGG-------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	V112 Male-body	V043 Embryo	V051 Head	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCGT.................................................................................................	21	1	107.00	107	6	2	55	1	16	10	17
...................................................................................................................................................................................................GAGTTCCACCATGCAAGTTTT............................................................................................................................................	21	1	73.00	73	1	0	20	0	17	0	35
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTC...................................................................................................	20	1	28.00	28	0	0	10	2	2	0	14
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTCG..................................................................................................	21	1	16.00	16	0	0	7	0	3	0	6
...................................................................................................................................................................................................GAGTTCCACCATGCAAGTTT.............................................................................................................................................	20	1	11.00	11	0	0	1	0	7	0	3
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTCGT.................................................................................................	22	1	8.00	8	0	1	3	0	3	0	1
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCG..................................................................................................	20	1	7.00	7	0	1	4	0	1	0	1
............................................................................................................................................................................................................................................AAAACTTGACACGTTGAGCTCG..................................................................................................	22	1	5.00	5	0	0	0	0	3	0	2
..................................................................................................................................................................................................CGAGTTCCACCATGCAAGTTTT............................................................................................................................................	22	1	4.00	4	0	0	0	0	1	0	3
............................................................................................................................................................................................................................................AAAACTTGACACGTTGAGCTCGT.................................................................................................	23	1	3.00	3	0	0	1	0	1	0	1
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCT....................................................................................................	19	1	2.00	2	0	0	1	0	0	0	1
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCGTG................................................................................................	22	1	2.00	2	0	1	1	0	0	0	0
....................................................................................................................................................................................................AGTTCCACCATGCAAGTTTTG...........................................................................................................................................	21	1	2.00	2	0	0	0	0	2	0	0
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTC...................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................................................................................................................................................................ACTTGACACGTTGAGCTCG..................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
..............................................................................................................................................AGG--------------------------------A--GCCTGTTCTACGTGC.................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
...............................................................................................................................................................................................................................................ACTTGACACGTTGAGCTC...................................................................................................	18	1	1.00	1	0	0	0	0	0	0	1
...................................................................................................................................................................................................GAGTTCCACCATGCAAGTTTTG...........................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
.....................................................................................................................................................................................................GTTCCACCATGCAAGTTTT............................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	1

droPer2

TTC---CTG--GAA-------------G--------------CCAT-------------------------------------------------------------------------------------------CT---AGG--------------------------------A--GCCTGTTCTACGTGCGAGTTCCACCATGCAAGTTTTGAG--CGTATA-TGAATCCAAAAACTTGACACGTTGAGCTCGTGCGTGG-------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	V111 Male-body	V042 Embryo	V050 Head	V057 Head	M021 Embryo	M042 Female-body
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCGT.................................................................................................	21	1	162.00	162	3	3	52	73	29	2
...................................................................................................................................................................................................GAGTTCCACCATGCAAGTTTT............................................................................................................................................	21	1	56.00	56	2	0	19	32	0	3
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTCG..................................................................................................	21	1	17.00	17	0	0	8	8	0	1
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTCGT.................................................................................................	22	1	15.00	15	0	0	8	5	2	0
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCG..................................................................................................	20	1	12.00	12	1	0	2	9	0	0
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTC...................................................................................................	20	1	9.00	9	0	0	3	6	0	0
............................................................................................................................................................................................................................................AAAACTTGACACGTTGAGCTCGT.................................................................................................	23	1	7.00	7	1	0	3	3	0	0
..................................................................................................................................................................................................CGAGTTCCACCATGCAAGTTTT............................................................................................................................................	22	1	7.00	7	0	0	3	4	0	0
...................................................................................................................................................................................................GAGTTCCACCATGCAAGTTT.............................................................................................................................................	20	1	7.00	7	2	0	2	3	0	0
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCGTG................................................................................................	22	1	3.00	3	0	0	1	2	0	0
...................................................................................................................................................................................................GAGTTCCACCATGCAAGT...............................................................................................................................................	18	1	2.00	2	0	0	0	2	0	0
............................................................................................................................................................................................................................................AAAACTTGACACGTTGAGCTCG..................................................................................................	22	1	2.00	2	0	0	0	2	0	0
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTC...................................................................................................	19	1	2.00	2	0	0	0	2	0	0
....................................................................................................................................................................................................AGTTCCACCATGCAAGTTTTG...........................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCT....................................................................................................	19	1	1.00	1	0	0	1	0	0	0
............................................................................................................................................................................................................................................AAAACTTGACACGTTGAGCTC...................................................................................................	21	1	1.00	1	0	0	0	1	0	0

droWil2

AT----GTG---AAGTGATG------------------A-A----------------------------------------------------ATTGAAAAGAAATTGAAAGTTACGTT--T---------------------AT--------------------------------A--TCCTGTCCTACGCATGAGTTCCACTAAGCAAGTTTTGGGCAT--ATTTCAAAAACAAAAACTTGACACGTTGAGCTCGTCTGTGTGACAG-A------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	V117 Male-body	V118 Embryo	V119 Head	M020 Head	M045 Female-body
...............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCGT................................................................................................	21	1	1452.00	1452	17	149	226	1048	12
...................................................................................................................................................................................................TGAGTTCCACTAAGCAAGTTTT...........................................................................................................................................	22	1	118.00	118	0	3	108	4	3
....................................................................................................................................................................................................GAGTTCCACTAAGCAAGTTTT...........................................................................................................................................	21	1	63.00	63	0	12	49	1	1
..............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTCGT................................................................................................	22	1	57.00	57	3	0	6	48	0
...............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCG.................................................................................................	20	1	49.00	49	0	0	2	46	1
.................................................................................................................................................................................................................................................CTTGACACGTTGAGCTCGTCT..............................................................................................	21	1	31.00	31	0	0	0	31	0
..............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTCG.................................................................................................	21	1	26.00	26	0	0	0	25	1
..................................................................................................................................................................................................ATGAGTTCCACTAAGCAAGTTT............................................................................................................................................	22	1	22.00	22	0	0	21	0	1
...................................................................................................................................................................................................TGAGTTCCACTAAGCAAGTTT............................................................................................................................................	21	1	22.00	22	0	1	21	0	0
..................................................................................................................................................................................................ATGAGTTCCACTAAGCAAGTT.............................................................................................................................................	21	1	14.00	14	0	0	14	0	0
...............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCGTCT..............................................................................................	23	1	9.00	9	0	0	0	9	0
....................................................................................................................................................................................................GAGTTCCACTAAGCAAGTTT............................................................................................................................................	20	1	7.00	7	0	1	6	0	0
.............................................................................................................................................................................................................................................AAAACTTGACACGTTGAGCTCG.................................................................................................	22	1	4.00	4	0	0	0	4	0
..............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTC..................................................................................................	20	1	4.00	4	0	0	0	4	0
...................................................................................................................................................................................................TGAGTTCCACTAAGCAAGTT.............................................................................................................................................	20	1	4.00	4	0	0	4	0	0
..................................................................................................................................................................................................ATGAGTTCCACTAAGCAAGTTTT...........................................................................................................................................	23	1	3.00	3	0	0	3	0	0
.....................................................................................................................................................................................................AGTTCCACTAAGCAAGTTTT...........................................................................................................................................	20	1	3.00	3	0	1	2	0	0
...............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTC..................................................................................................	19	1	2.00	2	0	0	0	2	0
...................................................................................................................................................................................................TGAGTTCCACTAAGCAAGTTTTG..........................................................................................................................................	23	1	2.00	2	0	0	2	0	0
.....................................................................................................................................................................................TCCTGTCCTACGCATGAGTTCC.........................................................................................................................................................	22	1	1.00	1	0	0	1	0	0
...................................................................................................................................................................................................TGAGTTCCACTAAGCAAG...............................................................................................................................................	18	1	1.00	1	0	0	1	0	0
.........................................................................................................................................................................................................................GGGCA--TATTTCAAAAACAAA.....................................................................................................................	20	1	1.00	1	0	1	0	0	0
................................................................................................................................................................................................................................................ACTTGACACGTTGAGCTCGT................................................................................................	20	1	1.00	1	0	0	0	0	1
................................................................................................................................................................................................................................................ACTTGACACGTTGAGCTCGTCT..............................................................................................	22	1	1.00	1	0	0	0	1	0

droVir3

AAGTGTATC------------------GCCAT-CTGAGTAAGTTGATATCGAAATTGAAATTTCATGTGGT----------------------------------------GTCGCTTT--CAAGAGCAG------CTC---GCG--------------------------------C--TTCTGCCCTACGCACGAGTTCCACTAATCAAGTTTTGAGCGG--ATTCGAAAGTCGAAAACTTGACACGTTGAGCTCGTCCGTGGGGCGG--------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	V116 Male-body	V053 Head	V047 Embryo	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCGT.................................................................................................	21	1	248.00	248	7	31	0	6	78	7	1	1	0	2	0	0	2	0	0	0	0	43	6	1	10	10	4	1	14	6	0	0	0	1	1	8	1	1	3	0	0	0	0	0	0	0	3
....................................................................................................................................................................................................AGTTCCACTAATCAAGTTTTG...........................................................................................................................................	21	1	216.00	216	2	59	1	0	2	32	0	0	0	0	0	0	0	0	0	0	0	21	10	8	17	19	10	0	19	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AGTTCCACTAATCAAGTTTTGA..........................................................................................................................................	22	1	210.00	210	1	42	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	50	27	10	24	18	11	0	9	17	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................AAAACTTGACACGTTGAGCTCG..................................................................................................	22	1	110.00	110	2	8	0	0	19	5	1	0	0	0	0	0	0	0	0	0	0	23	10	0	12	6	7	0	8	7	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTCG..................................................................................................	21	1	97.00	97	0	3	0	0	19	0	1	0	4	0	0	0	0	0	0	0	0	25	6	2	6	10	2	0	12	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTCGT.................................................................................................	22	1	37.00	37	0	2	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	16	2	0	1	3	0	0	5	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCG..................................................................................................	20	1	28.00	28	0	4	0	2	2	0	0	0	3	0	0	0	1	0	0	0	0	3	1	0	1	0	0	1	1	0	0	0	0	0	0	3	2	1	2	0	1	0	0	0	0	0	0
....................................................................................................................................................................................................AGTTCCACTAATCAAGTTTT............................................................................................................................................	20	1	16.00	16	0	6	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	2	1	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................GAGTTCCACTAATCAAGTTTT............................................................................................................................................	21	1	14.00	14	0	3	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	2	1	1	2	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................AAAACTTGACACGTTGAGCTC...................................................................................................	21	1	13.00	13	0	2	0	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AGTTCCACTAATCAAGTTTTGAG.........................................................................................................................................	23	1	9.00	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	2	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................GAAAACTTGACACGTTGAGCTCG..................................................................................................	23	1	7.00	7	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AGTTCCACTAATCAAGTTT.............................................................................................................................................	19	1	5.00	5	0	2	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTC...................................................................................................	20	1	4.00	4	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................AAAACTTGACACGTTGAGCTCGT.................................................................................................	23	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................GTTCCACTAATCAAGTTTTG...........................................................................................................................................	20	1	4.00	4	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................GAGTTCCACTAATCAAGTTT.............................................................................................................................................	20	1	4.00	4	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCGTCC...............................................................................................	23	1	3.00	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCGTC................................................................................................	22	1	3.00	3	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................ACTTGACACGTTGAGCTCGT.................................................................................................	20	1	2.00	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................AAAGTCGAAAACTTGACACGTTGAGCT....................................................................................................	27	1	2.00	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................GAAAACTTGACACGTTGAGCT....................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................GAGCGG--ATTCGAAAGTCG........................................................................................................................	18	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................GTTCCACTAATCAAGTTTTGA..........................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................ACTTGACACGTTGAGCTCG..................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCT....................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................G--ATTCGAAAGTCGAAAACTTGA...............................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCT....................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CGAAAACTTGACACGTTGAGC.....................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................AAAGTCGAAAACTTGACACGTTGAGC.....................................................................................................	26	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTC...................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................ACTTGACACGTTGAGCTCGTC................................................................................................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................GAGTTCCACTAATCAAGTT..............................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................GAGTTCCACTAATCAAGTTTTG...........................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................CGAGTTCCACTAATCAAGTTT.............................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

AAGAGATGG--CT----------------------GGGTAAGTTGC-------------------------------------------------------------------------------------------TC---AAGAGCCCAATCCTTATCCATACCATATCCACATTT--GGCTGTCCTACGAGCGAGTTCCACTAATCAAGTTTTGAG--T--GTTCGAAAATCAAAAACTTGACACGTTGAGCTCGTCTGTG--------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	V110 Male-body	V056 Head	V049 Head	V041 Embryo	M046 Female-body	M060 Embryo
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCGT.................................................................................................	21	1	260.00	260	40	50	36	4	78	52
...............................................................................................................................................................................................................................................ACTTGACACGTTGAGCTCGT.................................................................................................	20	1	11.00	11	0	0	0	0	11	0
...........................................................................................................................................................................................................................................AAAAACTTGACACGTTGAGCTCG..................................................................................................	23	1	8.00	8	1	5	0	0	2	0
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCG..................................................................................................	20	1	8.00	8	1	0	2	0	5	0
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTCGT.................................................................................................	22	1	8.00	8	2	3	2	0	0	1
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTCG..................................................................................................	21	1	5.00	5	0	0	1	0	2	2
....................................................................................................................................................................................................AGTTCCACTAATCAAGTTTTG...........................................................................................................................................	21	1	5.00	5	0	2	1	0	2	0
...........................................................................................................................................................................................................................................AAAAACTTGACACGTTGAGCTCGT.................................................................................................	24	1	4.00	4	2	1	0	0	1	0
....................................................................................................................................................................................................AGTTCCACTAATCAAGTTTT............................................................................................................................................	20	1	4.00	4	0	1	0	0	3	0
....................................................................................................................................................................................................AGTTCCACTAATCAAGTTTTGA..........................................................................................................................................	22	1	3.00	3	1	2	0	0	0	0
...................................................................................................................................................................................................GAGTTCCACTAATCAAGTTTT............................................................................................................................................	21	1	3.00	3	0	0	2	1	0	0
....................................................................................................................................................................................................AGTTCCACTAATCAAGTTT.............................................................................................................................................	19	1	2.00	2	0	1	1	0	0	0
...........................................................................................................................................................................................................................................AAAAACTTGACACGTTGAGCT....................................................................................................	21	1	2.00	2	0	1	1	0	0	0
...........................................................................................................................................................................................................................................AAAAACTTGACACGTTGAGCTC...................................................................................................	22	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................................................GCGAGTTCCACTAATCAAG................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................AAAAACTTGACACGTTGAG......................................................................................................	19	1	1.00	1	0	0	1	0	0	0
............................................................................................................................................................................................................................................AAAACTTGACACGTTGAGCTCG..................................................................................................	22	1	1.00	1	0	0	0	0	1	0
...................................................................................................................................................................................................GAGTTCCACTAATCAAGTTT.............................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0

droGri2

CC--------------------------------------------------------------------------------------------------------------------------------------------GGG--------------------------------T--GTCTGCCACACTTACGAGTTCCACTATTCAAGTTTTGAG--CGTATT-TGAAATCAAAAACTTGACACGTTGAGCTCGTGTGTGCGTTG---------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	V109 Male-body	M041 Female-body
...........................................................................................................................................................................................................................................AAAAACTTGACACGTTGAGCTCG..................................................................................................	23	1	43.00	43	30	13
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCGT.................................................................................................	21	1	12.00	12	6	6
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTCGT.................................................................................................	22	1	5.00	5	3	2
....................................................................................................................................................................................................AGTTCCACTATTCAAGTTTTGA..........................................................................................................................................	22	1	3.00	3	0	3
...........................................................................................................................................................................................................................................AAAAACTTGACACGTTGAGCTCGT.................................................................................................	24	1	2.00	2	1	1
...........................................................................................................................................................................................................................................AAAAACTTGACACGTTGAGCT....................................................................................................	21	1	2.00	2	2	0
............................................................................................................................................................................................................................................AAAACTTGACACGTTGAGCTCG..................................................................................................	22	1	2.00	2	0	2
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCTCG..................................................................................................	20	1	2.00	2	0	2
....................................................................................................................................................................................................AGTTCCACTATTCAAGTTTTG...........................................................................................................................................	21	1	2.00	2	0	2
...........................................................................................................................................................................................................................................AAAAACTTGACACGTTGAGCTC...................................................................................................	22	1	1.00	1	0	1
..............................................................................................................................................................................................................................................AACTTGACACGTTGAGCT....................................................................................................	18	1	1.00	1	0	1
...........................................................................................................................................................................................................................................AAAAACTTGACACGTTGAGC.....................................................................................................	20	1	1.00	1	0	1
...............................................................................................................................................................................................................................................ACTTGACACGTTGAGCTCGT.................................................................................................	20	1	1.00	1	0	1
.............................................................................................................................................................................................................................................AAACTTGACACGTTGAGCTCG..................................................................................................	21	1	1.00	1	0	1
...................................................................................................................................................................................................GAGTTCCACTATTCAAGTTTT............................................................................................................................................	21	1	1.00	1	0	1

dsi-mir-969

chrU_M_7032:254-366 +

Known

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads