ID:

dsi-mir-967

 Coordinate:

2L:12267932-12268031 -

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intron [Dsim\GD22116-in]

No Repeatable elements found

Sense Strand Reads

GAAAACCAAAAAAAAAAAAACACCAAGAAAACCAAAACTGAGAACTGCAGGAGACTTGGAGAGCAGAGATACCTCCGGAGAAGCGCGTGACCTGACCCCAGCAGGAGAACCCAACCCGCTTTTCCGCCTAGGTGTCTCTCTCTCTCTCTCACTCTATCTCAGTTCCTCAGCTCGAGAGTGTGTATCTTACCCCGAGTGTG
*************************************************.((((...((((((.((((((((((.((((((((((.((..((((.......))))........)).))))))))))...)))))))))))))))).))))......******************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 O002
Head
 M024
male body
 GSM343915
embryo
 M025
embryo
 M053
Female-body		 SRR618934
Ovary		 O001
Testis
 SRR553485
Ovary		 SRR553486
Ovary		 SRR553487
Ovary		 SRR553488
Ovary
................................................................AGAGATACCTCCGGAGAAGCG................................................................................................................... 21 0 1 78.00 78 38 0 2 10 8 6 5 0 4 1 1 3
................................................................AGAGATACCTCCGGAGAAG..................................................................................................................... 19 0 1 53.00 53 29 1 22 0 1 0 0 0 0 0 0 0
......................................................................................................................CTTTTCCGCCTAGGTGTCTCTCC........................................................... 23 1 1 17.00 17 10 0 2 1 3 0 0 0 0 0 0 1
......................................................................................................................CTTTTCCGCCTAGGTGTCTCTCT........................................................... 23 0 1 14.00 14 8 0 1 2 2 1 0 0 0 0 0 0
................................................................AGAGATACCTCCGGAGAAGCGCG................................................................................................................. 23 0 1 13.00 13 0 9 0 1 0 0 0 3 0 0 0 0
................................................................AGAGATACCTCCGGAGAAGC.................................................................................................................... 20 0 1 12.00 12 4 4 1 1 0 0 2 0 0 0 0 0
......................................................................................................................CTTTTCCGCCTAGGTGTCTC.............................................................. 20 0 1 10.00 10 6 1 3 0 0 0 0 0 0 0 0 0
................................................................AGAGATACCTCCGGAGAA...................................................................................................................... 18 0 1 10.00 10 0 6 0 0 0 0 0 3 1 0 0 0
..................................................................AGATACCTCCGGAGAAGCGCGT................................................................................................................ 22 0 1 7.00 7 0 1 0 0 0 0 3 0 1 0 2 0
...................................................................................................................CCGCTTTTCCGCCTAGGTGTC................................................................ 21 0 1 6.00 6 1 1 3 1 0 0 0 0 0 0 0 0
......................................................................................................................CTTTTCCGCCTAGGTGTCTCTC............................................................ 22 0 1 6.00 6 4 1 0 1 0 0 0 0 0 0 0 0
................................................................AGAGATACCTCCGGAGAAGCGT.................................................................................................................. 22 1 1 6.00 6 2 0 0 0 0 0 0 0 2 0 2 0
...................................................................................................................CCGCTTTTCCGCCTAGGTGTCT............................................................... 22 0 1 4.00 4 0 0 2 0 0 0 1 0 1 0 0 0
................................................................AGAGATACCTCCGGAGAAGCGC.................................................................................................................. 22 0 1 4.00 4 0 1 0 2 0 0 0 1 0 0 0 0
................................................................AGAGATACCTCCGGAGA....................................................................................................................... 17 0 1 4.00 4 0 0 0 0 0 0 0 0 0 4 0 0
....................................................................................................................CGCTTTTCCGCCTAGGTG.................................................................. 18 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CCGCTTTTCCGCCTAGGT................................................................... 18 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
....................................................................................................................CGCTTTTCCGCCTAGGTGTCTC.............................................................. 22 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CCGCTTTTCCGCCTAGGTGTCTC.............................................................. 23 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
................................................................AGAGATACCTCTGGAGAAGCG................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
................................................................AGAGATACCTCCGGAGAGGCG................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
................................................................AGAGATACCTCCGGAGAAGCGA.................................................................................................................. 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................CCGCTTTTCCGCCTAGGTGTCTCTC............................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................CTTTTCCGCCTAGGTTTCTCTC............................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CCGCTTTTCCGCCTAGGTGT................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGATACCTCCGGAGAAGCGCGTGACCT........................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................AGATACCTCCGGAGAAGCGCG................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................AGAGATACCTCCGGAGAAGG.................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGATACCTCCGGAGAAGCG................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................ACCAAGAAAACCAAAACTGAGAACTGC........................................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................CTTTTCCGCCTAGGTCTCTCTCTA.......................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................TCCGGAGAAGCGCGTGACCTGAA........................................................................................................ 23 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................CCGCTTTTCCGCCTAGGTGTCTCT............................................................. 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...............................CCAAAACTGAGAACTGCAGG..................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................AGGTGTCTCTCTCTCTCT..................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................CGCTTTTCCGCCTAGGTGTC................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................AGTTCCTCAGCTCGAGAGTGT................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................GAGATACCTCCGGAGAAGC.................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................TTTTCCGCCTAGGTGTCTCTCC........................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................CTTTTCCGCCTAGGTGTCTCT............................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CCGCTTTTCCGCCTAGGTG.................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................GAACTGCAGGAGACTTGGAGAGCAGAG.................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................CTTTTCCGCCTAGTTGTCT............................................................... 19 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................AAAACTGAGAACTGCAGGAGACTTGGA............................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................AGATACCTCCGGAGAAGCGC.................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................CTTTTCCGCCTAGTTGTCTCTC............................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................AGAGATACCTCCGGAGCAGCGC.................................................................................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
............................AAACCAAAACTGAGAACTGCA....................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................CTCCGGAGAAGCGCGTGACCTGACCC...................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................CTTTTCCGCCTAGGTGTCTCTCCT.......................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................CCGGAGAAGCGCGTGACCTGG......................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................AGAGATACCTCCGGATAAGC.................................................................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.............................AACCAAAACTGAGAACTGCAGGA.................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................CTTTTCCGCCTAGGTGTCTCTCG........................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................GTTCCTCAGCTCGAGAGTG.................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................AGAGATACCTCCGGAGAAC..................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGATACCTCCGGAGAAGC.................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................CTTTTCCGCCTAGGTGTCTCTCTT.......................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................TCCTGAGGTCGAGAGT..................... 16 2 20 0.50 10 0 0 0 0 0 0 0 0 0 0 4 6
.............................................TGCAGGACACTTGGGGAGCA....................................................................................................................................... 20 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................GAGCGCGGGACCTGAACC...................................................................................................... 18 3 20 0.25 5 0 0 0 0 0 0 0 0 0 4 1 0
...............................................................................GGAGCGCGGGACCTGAACC...................................................................................................... 19 3 9 0.22 2 0 0 0 0 0 0 0 0 0 1 0 1
.................................................................................AGCGCGGGACCTGAACC...................................................................................................... 17 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0
..............................................................................................................CGAACCCGTTTTCCCGCCTA...................................................................... 20 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 1
.......................................................................................................GGAGGACCGAACCCGC................................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
.................................................................................AGCGCGGGACCTGAACCG..................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
..................................................................AAGTAGCTCCGGAGAAGC.................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

CACACTCGGGGTAAGATACACACTCTCGAGCTGAGGAACTGAGATAGAGTGAGAGAGAGAGAGAGACACCTAGGCGGAAAAGCGGGTTGGGTTCTCCTGCTGGGGTCAGGTCACGCGCTTCTCCGGAGGTATCTCTGCTCTCCAAGTCTCCTGCAGTTCTCAGTTTTGGTTTTCTTGGTGTTTTTTTTTTTTTGGTTTTC
********************************************......((((.((((((((((((((((...((((((((((.((........((((.......))))..)).)))))))))).)))))))))).))))))...)))).************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR618934
Ovary		 SRR553487
Ovary		 GSM343915
embryo
.......................................................................AGGCGAAAAAGCGTGTTG............................................................................................................... 18 2 2 0.50 1 0 0 1
......................................................................................................................................................................TGGTTGTCTTGGAGTTTTTTT............. 21 2 2 0.50 1 1 0 0
............................................TAGAGTGAGAGAGAGAG........................................................................................................................................... 17 0 3 0.33 1 1 0 0
...................................................................................................................................................................TTTTGGTTTTCTTGGT..................... 16 0 3 0.33 1 0 1 0
.........................................................................................................................................................................TTTTCTTCGTGTTTTTTTTTGT......... 22 2 15 0.07 1 0 0 0
.............................................AGAGTGAGAGAGAGAGAGA........................................................................................................................................ 19 0 16 0.06 1 0 0 1
..................................................GAGAGAGAGAGAGAG....................................................................................................................................... 15 0 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 2L:12267882-12268081 - dsi-mir-967 GAAAACC-------------AAAAAAA-A-AAAA-----ACACCAAGAAAACCAAAAC-----TGAGAACTGCAG--GAGA------CT-TGGAG-----------------------AGCAGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGCGTGACCTGACCCCAGCAGG----------------AG-AACCCAACCCGCTTTTCC--------G-CCT-----------------AGGTGTCTC-TCTCTCTCTCT--C--------AC--TCTATCTCAGTTCCT------CAGCTCGAG----------AGTGTGTATCTTA-CCCCGAG--TGTG
droSec2 scaffold_16:650994-651190 - dse_56 GAAAACC-------------AAAAAAA-AAAAAA-----ACACCAAGAAAACCAAAAC-----TGAGAACTGCAG--GAGA------CT-TGGAG-----------------------AGCAGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGCGTGACCTGACCCCAGCAGG----------------AG-AACCCAACCCGCTTTTCC--------G-CCT-----------------AGGTGTCTC-TCT----CT--CTC--------TC--TCTATCTCAGTTCCT------CAGCTCGAG----------AGTGTGTATCTTA-CCCCGAG--TGTG
dm3 chr2L:12459963-12460153 - dme-mir-967 AAAAACC------------GAA-AAAA---AAAA-----ACACTAAGAAAACCAAAAA-----TGAGAACTGCAG--GAGA------CT-TGGAG-----------------------AGCAGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGCGTGACCTGACCCCAGCAGG----------------AG-AACCCAACCCGCTTTTCC--------A-CCT-----------------AGGTGTCTC-TCT----CT----C--------TC--TTTATCT--GTTCCT------CAGCTCGAG----------AGTGTGTATCTTT-CCCCGAG--TGTG
droEre2 scaffold_4929:12958907-12959115 + GAAAAGCGA-----AAACCGAA-AAAA---CGAA-----AAACCAAGAAAACCAAAAC-----TGAGAACTGCAG--GAGA------CT-TGGAG-----------------------AGCAGAG------ATGATA-------------------------------------CCTCTG----------------GAGAAGCGCGTGACCTGACCCCAGCAGG----------------AG-AACCCAGCCCGCTTTTCC--------G-CCT-----------------AGGTGTCTC-TCACTCTCTCT--C--------TC--TCTCTCTCTTCTCCT------CAGCCCGAG----------TGTGTGTATCTTT-CCCCGAA--TGTG
droYak3 2L:8897045-8897266 - GAAAACCGAAACCAAAACCGAA-A--------AA-----AAACCAAGAAAACCAAAAC-----TGAGAACTGCAG--GAGACGGAGACT-TGGAG-----------------------AGCAGAGACAGAGATGATA-------------------------------------CCTCTG----------------GAGAAGCGCGTGACCTGACCCCAGCA-------------------G-AACCCAACCCGCTTTTCC--------G-CCT-----------------AGATGTCTC-TATCTCGCTCT--C--------CC--TCTCTCT--GTTCCTCTTGCACAGCTCGAG----------TGTGTGTATCTTT-CCCCGAG--TGTG
droEug1 scf7180000409122:844094-844271 - GAACAAA-------------A----AACAC---A---------------CATCGAAAC-----TGAGAACTGCAGAGGAGA------CT-TTGAGAAG--------------------AGAAGAG---------ATA-------------------------------------ACACTG----------------GAGAAGCGCGTGACCTGACCCCAGAAGG-----------------C-AACCCAACCCGCTTCTCC-----AG-G-CCA-----------------AGAGGTCTCCTCT----CT--CTC--------GC--TCGCTCTCACTCCC--------------------------TGTGTTTTTCTCA-GACCAAG--TGTG
droBia1 scf7180000302422:507050-507210 + GAAAATC-------------A----G--C-------------------------AGGC-----TGAGAACTGCAG--GAGA------CT-CCGAG-----------------------AGGAGAG-CGGAGA-GATA-------------------------------------CCTCTG----------------GAGAAGCGCGTGACCCGACCCCGAG--G----------------GC-TGCCCAGCCCGCTTCTCC-----AGAGGG-C-----------------AGAGGTCGC-TCT----CT--GTG------------------------CCT------CTGCC---G----------CGTGTGTAT--CC-CCACGAG--CGTG
droTak1 scf7180000415865:119221-119370 + GAAAAAA-------------A----AC-C-------------------------GAAC-----TGAGAACTGCAG--GAGA------CT-TGGAG-----------------------AGAAGAG---------CTA-------------------------------------TCTCTG----------------GAGAAGCGCGTGACCTGACCTGAG----------------------------AACCCGCTTCTCC-----AG-G-G-C-----------------AGAGGTCTC-TCT----CT--AT------------------------TTCT------CAGACCGAG----------TGTGTGTATCTCCCCCTCGAG--TGTG
droEle1 scf7180000491028:2648335-2648512 + GAAAAAA-------------A----AA-C-------------------------GAAC-----TGAGAACTGCAT--GGGACTGAGACT-TCGAG-----------------------AGCAGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGCGTGACCCGACCTCAGAAGG-----CACCAGCCAACCC-AATCCAACCCGCATCTCC------------------------------AGACGTCTC-TCT----T-----------------------------TTCT------CCGCCCGAGTGTGTGTG-GTGTGTGTATCTCG-TCCCGAG--TGTG
droFic1 scf7180000454015:349245-349421 - GAAAAAA-------------A----AT-CA---AAATCAAAGC------------GAC-----TGAGAACTGCAG--GAGA------CTTTCGAG-----------------------AGCAGGG---------ATAT------------------A-----------------TCTCTG----------------GAGAAGCGCGTGACCTGACCCCAGAAGT----------------AGCAACCCAGCCCGCTTCTCC-----GG-G-CCA-----------------AAAGGTCTC-TCT----TT----T--------CCTTGCGGCCTTAAT------------------G----------TGTGTGTATCTCC-CCCCGAG--AGTG
droKik1 scf7180000302472:819802-820012 - GAAACCG-------------AA-AAAATAA---A---------------AACC-GAAA-----TGAGAACTGCATATGAGA-TGA--TTTTCGAGAAGCGAGAAACGAGAAAACCGAGAGGAGAG---------ACGT------------------GTTTTTTGTTGTGAGATACCTCAGTTTAGGAGAAGGCAAAGAAAAGCGCGTGACCTGACCCCATGA-------------------A-AACCC--------TCTCC-----AC----------------------------------------------A------------------------ACA------C--GCT--GTGTGTGTG-CTGTGTGTATCTCG-GCGAGAGTGTGTG
droAna3 scaffold_12916:12931155-12931336 + AAAAAAA-------------A----AA-A-------------------------AAACTCATCCGAGAAATGCAT--GAGA------TT-TTGAG-----------------------AGGAGAG---------ATA-------------------------------------CCTC-------------------AGAAGCGCGTGACCTGACCCCGTCCGTCTGTCCATCTA-----TG-AACCCAACCCGCTTTTCT---CCAAACAC-CAGAGAGGAGGTCGAGAG----------TG--------------------------------------A------C------GGTGTGTGTGAGTGTGTCTCTCTCCCCCTCAAG--TGTC
droBip1 scf7180000396580:589804-589961 - GAAAAAT-------------A----AA---------TCCAACCG-AGA-------ACA-----TGAGAAGTGCAT--GAGA------TT-TTGAG-----------------------AGGAGAG---------ACA-------------------------------------CCTC-------------------AGAGGCGCGTGACCTGACCCGT-CA-G----------------CG-AACCCAGCCCGCTTTTCTC-----------------------------------CTC-TCC----T----CT------------------------CCT------C--TCCGGGTGTGTGTG--TATGTGTCTCTCC-CCTCAAG--AGTC
dp5 4_group3:3150540-3150765 - GAAAAAA-------------A----AA-CAT-----TCAAAACGAGAAAGACAAAAAT-----TGAGAACTGCAT--GAGA------CT-TGGAG-----------------------AGAAGAG---------ATACCCACAAGAGGCAGGCAGTG------------A------AGTG---GAGTGGAGGGAGCGAGAAGCGCGTGACCTGACCCCAAGAC-----------------CG-AACCCAACCCGGTTCTGTTCTCCAGTGTA-CAGACAGGCA-----------------CTCT----GTAT--GAGTATGTAC------------CCTCCT------TCGCTC---------------CCTGTATGCGT-GCACGTG--TGTG
droPer2 scaffold_1:4633223-4633444 - GAAAAAA-------------AA---AA-CAT-----TCAAAACGAGAAAGACAAAAAT-----TGAGAACTGCAT--GAGA------TT-TGGAG-----------------------AGAAGAG---------ATACCCACAAGAGACGGT-----------------------CCGTG---GAGTGGAGGGAGCGAGAAGCGCGTGACCTGACCCCAAGAC-----------------CG-AACCCAACCCGGTTCTGTTCTCCAGTGTA-CAGACAGGCA-----------------CTCT----GTAT--GAGTATGTAC------------CCTCCT------TCGCTC---------------CCTGTATGCGT-GCACGTG--TGTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
GAAAACC-------------AAAAAAA-A-AAAA-----ACACCAAGAAAACCAAAAC-----TGAGAACTGCAG--GAGA------CT-TGGAG-----------------------AGCAGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGCGTGACCTGACCCCAGCAGG----------------AG-AACCCAACCCGCTTTTCC--------G-CCT-----------------AGGTGTCTC-TCTCTCTCTCT--C--------AC--TCTATCTCAGTTCCT------CAGCTCGAG----------AGTGTGTATCTTA-CCCCGAG--TGTGSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCG..............................................................................................................................................................................................21178.007810382800641135
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAG................................................................................................................................................................................................19153.005302922101000000
..............................................................................................................................................................................................................................................................CTTTTCC--------G-CCT-----------------AGGTGTCTC-TCT..........................................................................................23114.0014281200100000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGCG............................................................................................................................................................................................23113.0013100039000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGC...............................................................................................................................................................................................20112.0012141004000002
..............................................................................................................................................................................................................................................................CTTTTCC--------G-CCT-----------------AGGTGTCTC-.............................................................................................20110.0010063001000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAA.................................................................................................................................................................................................18110.0010000036010000
...........................................................................................................................AG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGCGT...........................................................................................................................................................................................2217.007000001010203
...........................................................................................................................................................................................................................................................CCGCTTTTCC--------G-CCT-----------------AGGTGTC................................................................................................2116.006113001000000
..............................................................................................................................................................................................................................................................CTTTTCC--------G-CCT-----------------AGGTGTCTC-TC...........................................................................................2216.006140001000000
...........................................................................................................................................................................................................................................................CCGCTTTTCC--------G-CCT-----------------AGGTGTCT...............................................................................................2214.004002000010001
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGC.............................................................................................................................................................................................2214.004200011000000
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGA..................................................................................................................................................................................................1714.004000000004000
............................................................................................................................................................................................................................................................CGCTTTTCC--------G-CCT-----------------AGGTG..................................................................................................1812.002000002000000
...........................................................................................................................................................................................................................................................CCGCTTTTCC--------G-CCT-----------------AGGT...................................................................................................1812.002000002000000
............................................................................................................................................................................................................................................................CGCTTTTCC--------G-CCT-----------------AGGTGTCTC-.............................................................................................2212.002000002000000
...........................................................................................................................................................................................................................................................CCGCTTTTCC--------G-CCT-----------------AGGTGTCTC-.............................................................................................2312.002010001000000
...........................................................................................................................................................................................................................................................CCGCTTTTCC--------G-CCT-----------------AGGTGTCTC-TC...........................................................................................2511.001000001000000
...........................................................................................................................................................................................................................................................CCGCTTTTCC--------G-CCT-----------------AGGTGT.................................................................................................2011.001010000000000
...........................................................................................................................AG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGCGTGACCT......................................................................................................................................................................................2711.001000100000000
...........................................................................................................................AG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGCG............................................................................................................................................................................................2111.001100000000000
...........................................................................................................................AG---------ATA-------------------------------------CCTCCG----------------GAGAAGCG..............................................................................................................................................................................................1911.001000000100000
.........................................ACCAAGAAAACCAAAAC-----TGAGAACTGC.................................................................................................................................................................................................................................................................................................................................2711.001000100000000
...........................................................................................................................................................................................................................................................CCGCTTTTCC--------G-CCT-----------------AGGTGTCTC-T............................................................................................2411.001000000100000
...................................................CCAAAAC-----TGAGAACTGCAG--G............................................................................................................................................................................................................................................................................................................................2011.001000100000000
...................................................................................................................................................................................................................................................................................................AGGTGTCTC-TCTCTCTCT....................................................................................1811.001000010000000
............................................................................................................................................................................................................................................................CGCTTTTCC--------G-CCT-----------------AGGTGTC................................................................................................2011.001000010000000
...............................................................................................................................................................................................................................................................................................................................................AGTTCCT------CAGCTCGAG----------AGTGT......................2111.001000001000000
..........................................................................................................................GAG---------ATA-------------------------------------CCTCCG----------------GAGAAGC...............................................................................................................................................................................................1911.001000000100000
..............................................................................................................................................................................................................................................................CTTTTCC--------G-CCT-----------------AGGTGTCTC-T............................................................................................2111.001010000000000
...........................................................................................................................................................................................................................................................CCGCTTTTCC--------G-CCT-----------------AGGTG..................................................................................................1911.001000001000000
..................................................................GAACTGCAG--GAGA------CT-TGGAG-----------------------AGCAGAG---------....................................................................................................................................................................................................................................................................2711.001000000100000
.....................................................AAAAC-----TGAGAACTGCAG--GAGA------CT-TGGA............................................................................................................................................................................................................................................................................................................2711.001000100000000
...........................................................................................................................AG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGC.............................................................................................................................................................................................2011.001000001000000
................................................AAACCAAAAC-----TGAGAACTGCA................................................................................................................................................................................................................................................................................................................................2111.001000100000000
...............................................................................................................................................................................CTCCG----------------GAGAAGCGCGTGACCTGACCC.................................................................................................................................................................................2611.001000100000000
.................................................AACCAAAAC-----TGAGAACTGCAG--GA...........................................................................................................................................................................................................................................................................................................................2311.001000100000000
................................................................................................................................................................................................................................................................................................................................................GTTCCT------CAGCTCGAG----------AGTG.......................1911.001010000000000
...........................................................................................................................AG---------ATA-------------------------------------CCTCCG----------------GAGAAGC...............................................................................................................................................................................................1811.001000001000000
droSec2
GAAAACC-------------AAAAAAA-AAAAAA-----ACACCAAGAAAACCAAAAC-----TGAGAACTGCAG--GAGA------CT-TGGAG-----------------------AGCAGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGCGTGACCTGACCCCAGCAGG----------------AG-AACCCAACCCGCTTTTCC--------G-CCT-----------------AGGTGTCTC-TCT----CT--CTC--------TC--TCTATCTCAGTTCCT------CAGCTCGAG----------AGTGTGTATCTTA-CCCCGAG--TGTGSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCG..............................................................................................................................................................................................211502.0050217593122112
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGC...............................................................................................................................................................................................201135.00135936288
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGC.............................................................................................................................................................................................22125.002571332
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAG................................................................................................................................................................................................19121.002111334
..............................................................................................................................................................................................................................................................CTTTTCC--------G-CCT-----------------AGGTGTCTC-TCT----......................................................................................23113.00133226
..............................................................................................................................................................................................................................................................CTTTTCC--------G-CCT-----------------AGGTGTCTC-.............................................................................................20112.00122082
..........................................................................................................................GAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCG..............................................................................................................................................................................................20111.001100011
..............................................................................................................................................................................................................................................................CTTTTCC--------G-CCT-----------------AGGTGTCTC-T............................................................................................21111.00111028
..............................................................................................................................................................................................................................................................CTTTTCC--------G-CCT-----------------AGGTGTCTC-TC...........................................................................................22110.00101072
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGCG............................................................................................................................................................................................2319.0095301
............................................................................................................................................................................................................................................................CGCTTTTCC--------G-CCT-----------------AGGTGTCT...............................................................................................2118.0080071
...........................................................................................................................................................................................................................................................CCGCTTTTCC--------G-CCT-----------------AGGTGTCT...............................................................................................2214.0040040
..............................................................................................................................................................................................................................................................CTTTTCC--------G-CCT-----------------AGGTGTCT...............................................................................................1914.0040031
...........................................................................................................................AG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGCGT...........................................................................................................................................................................................2213.0033000
..........................................................................................................................GAG---------ATA-------------------------------------CCTCCG----------------GAGAAG................................................................................................................................................................................................1813.0030003
............................................................................................................................................................................................................................................................CGCTTTTCC--------G-CCT-----------------AGGTGTC................................................................................................2012.0020020
............................................................................................................................G---------ATA-------------------------------------CCTCCG----------------GAGAAGCG..............................................................................................................................................................................................1812.0020002
........................................................................................................................CAGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCG..............................................................................................................................................................................................2212.0020002
...............................................................................................................................................................................................................................................................................................................................................................................AGTGTGTATCTTA-CCCCGAG--T...2111.0010100
...........................................................................................................................AG---------ATA-------------------------------------CCTCCG----------------GAGAAGC...............................................................................................................................................................................................1811.0010100
.............................................................................................................................................................................................................................................................GCTTTTCC--------G-CCT-----------------AGGTGTCTC-T............................................................................................2211.0010001
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAAGCGCGT...........................................................................................................................................................................................2411.0010010
.........................................................................................................................AGAG---------ATA-------------------------------------CCTCCG----------------GAGAA.................................................................................................................................................................................................1811.0010010
.............................................................................................................................................................................................................................................................GCTTTTCC--------G-CCT-----------------AGGTGTCT...............................................................................................2011.0010010
.............................................................................................................................................................................................................................................................GCTTTTCC--------G-CCT-----------------AGGTGTCTC-.............................................................................................2111.0010100
.............................................................................................................................................................................................................................................................GCTTTTCC--------G-CCT-----------------AGGTGTCTC-TC...........................................................................................2311.0010010
............................................................................................................................................................................................................................................................CGCTTTTCC--------G-CCT-----------------AGGTGTCTC-TCT----......................................................................................2511.0010001
.......................................................................GCAG--GAGA------CT-TGGAG-----------------------AGC.................................................................................................................................................................................................................................................................................1811.0010100
...............................................................................................................................................................................................................................................................TTTTCC--------G-CCT-----------------AGGTGTCTC-TC...........................................................................................2111.0010001
.............................................................................................................................................................................................................................................................GCTTTTCC--------G-CCT-----------------AGGTGTC................................................................................................1911.0010100
...............................................................................................................................................................................................................................................................TTTTCC--------G-CCT-----------------AGGTGTCTC-T............................................................................................2011.0010001
.....................................................................CTGCAG--GAGA------CT-TGGAG-----------------------AGC.................................................................................................................................................................................................................................................................................2011.0010100
.....................AAAAAA-AAAAAA-----ACACCAA............................................................................................................................................................................................................................................................................................................................................................1960.1710010
droEre2
GAAAAGCGA-----AAACCGAA-AAAA---CGAA-----AAACCAAGAAAACCAAAAC-----TGAGAACTGCAG--GAGA------CT-TGGAG-----------------------AGCAGAG------ATGATA-------------------------------------CCTCTG----------------GAGAAGCGCGTGACCTGACCCCAGCAGG----------------AG-AACCCAGCCCGCTTTTCC--------G-CCT-----------------AGGTGTCTC-TCACTCTCTCT--C--------TC--TCTCTCTCTTCTCCT------CAGCCCGAG----------TGTGTGTATCTTT-CCCCGAA--TGTGSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
...............................................................................GA------CT-TGGAG-----------------------AGCAGAG------ATGAT..................................................................................................................................................................................................................................................................2111.001001000
................................................................GAGAACTGCAG--GAGA------CT-TGGAG-----------------------AGCA................................................................................................................................................................................................................................................................................2611.001001000
droYak3
GAAAACCGAAACCAAAACCGAA-A--------AA-----AAACCAAGAAAACCAAAAC-----TGAGAACTGCAG--GAGACGGAGACT-TGGAG-----------------------AGCAGAGACAGAGATGATA-------------------------------------CCTCTG----------------GAGAAGCGCGTGACCTGACCCCAGCA-------------------G-AACCCAACCCGCTTTTCC--------G-CCT-----------------AGATGTCTC-TATCTCGCTCT--C--------CC--TCTCTCT--GTTCCTCTTGCACAGCTCGAG----------TGTGTGTATCTTT-CCCCGAG--TGTGSizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
..................................................................................................................................GATGATA-------------------------------------CCTCTG----------------GAGAAGCGCGT...........................................................................................................................................................................................2413.0030030000
......................................................................................ACT-TGGAG-----------------------AGCAGAGACAGAGAT.....................................................................................................................................................................................................................................................................2313.0030010011
..................................................................................................................................GATGATA-------------------------------------CCTCTG----------------GAGAAG................................................................................................................................................................................................1912.0020020000
.....................................................................................GACT-TGGAG-----------------------AGCAGAGAC...........................................................................................................................................................................................................................................................................1811.0010000001
..................................................................................................................................GATGATA-------------------------------------CCTCTG----------------GAGAAGCGC.............................................................................................................................................................................................2211.0010010000
................................................................................................................................................................................................................................................................................................................................................................................GTGTGTATCTTT-CCCCGAG--TGT.2211.0010010000
.................................................................................................................................................................................CTG----------------GAGAAGCGCGTGACCTG.....................................................................................................................................................................................2011.0010000001
...................................................................................................................................ATGATA-------------------------------------CCTCTG----------------GAGAAGCGCGTG..........................................................................................................................................................................................2411.0010010000
.................................................................................................................................................................................................................................................................................................................................................................CGAG----------TGTGTGTATCTTT-CCCCGAG--TGT.2711.0010000001
.......................................................................................CT-TGGAG-----------------------AGCAGAGACAGA........................................................................................................................................................................................................................................................................1911.0010010000
...................................................................................................................................ATGATA-------------------------------------CCTCTG----------------GAGAAGCGC.............................................................................................................................................................................................2111.0010000010
.......................................................................GCAG--GAGACGGAGACT-TGGAG-----------------------AGC.................................................................................................................................................................................................................................................................................2411.0010000001
..................................................................................................................................GATGATA-------------------------------------CCTCTG----------------GAGAAGCGCGTGACC.......................................................................................................................................................................................2811.0010010000
......................................................................................ACT-TGGAG-----------------------AGCAGAGACAGAG.......................................................................................................................................................................................................................................................................2111.0010000100
.................................................................................................................................................................................................................................................................................................................................................................CGAG----------TGTGTGTATCTTT-CCCCGA.......2311.0010010000
..........................................................................................................................................................................................................................................................................................................................................CTCT--GTTCCTCTTGCACAGCTCGA......................................2411.0010010000
........................................................................................T-TGGAG-----------------------AGCAGAGACAGAGATGA...................................................................................................................................................................................................................................................................2311.0011000000
droEug1
GAACAAA-------------A----AACAC---A---------------CATCGAAAC-----TGAGAACTGCAGAGGAGA------CT-TTGAGAAG--------------------AGAAGAG---------ATA-------------------------------------ACACTG----------------GAGAAGCGCGTGACCTGACCCCAGAAGG-----------------C-AACCCAACCCGCTTCTCC-----AG-G-CCA-----------------AGAGGTCTCCTCT----CT--CTC--------GC--TCGCTCTCACTCCC--------------------------TGTGTTTTTCTCA-GACCAAG--TGTGSizeHit CountTotal NormTotal
No Reads
droBia1
GAAAATC-------------A----G--C-------------------------AGGC-----TGAGAACTGCAG--GAGA------CT-CCGAG-----------------------AGGAGAG-CGGAGA-GATA-------------------------------------CCTCTG----------------GAGAAGCGCGTGACCCGACCCCGAG--G----------------GC-TGCCCAGCCCGCTTCTCC-----AGAGGG-C-----------------AGAGGTCGC-TCT----CT--GTG------------------------CCT------CTGCC---G----------CGTGTGTAT--CC-CCACGAG--CGTGSizeHit CountTotal NormTotal
No Reads
droTak1
GAAAAAA-------------A----AC-C-------------------------GAAC-----TGAGAACTGCAG--GAGA------CT-TGGAG-----------------------AGAAGAG---------CTA-------------------------------------TCTCTG----------------GAGAAGCGCGTGACCTGACCTGAG----------------------------AACCCGCTTCTCC-----AG-G-G-C-----------------AGAGGTCTC-TCT----CT--AT------------------------TTCT------CAGACCGAG----------TGTGTGTATCTCCCCCTCGAG--TGTGSizeHit CountTotal NormTotal
No Reads
droEle1
GAAAAAA-------------A----AA-C-------------------------GAAC-----TGAGAACTGCAT--GGGACTGAGACT-TCGAG-----------------------AGCAGAG---------ATA-------------------------------------CCTCTG----------------GAGAAGCGCGTGACCCGACCTCAGAAGG-----CACCAGCCAACCC-AATCCAACCCGCATCTCC------------------------------AGACGTCTC-TCT----T-----------------------------TTCT------CCGCCCGAGTGTGTGTG-GTGTGTGTATCTCG-TCCCGAG--TGTGSizeHit CountTotal NormTotal
No Reads
droFic1
GAAAAAA-------------A----AT-CA---AAATCAAAGC------------GAC-----TGAGAACTGCAG--GAGA------CTTTCGAG-----------------------AGCAGGG---------ATAT------------------A-----------------TCTCTG----------------GAGAAGCGCGTGACCTGACCCCAGAAGT----------------AGCAACCCAGCCCGCTTCTCC-----GG-G-CCA-----------------AAAGGTCTC-TCT----TT----T--------CCTTGCGGCCTTAAT------------------G----------TGTGTGTATCTCC-CCCCGAG--AGTGSizeHit CountTotal NormTotal
No Reads
droKik1
GAAACCG-------------AA-AAAATAA---A---------------AACC-GAAA-----TGAGAACTGCATATGAGA-TGA--TTTTCGAGAAGCGAGAAACGAGAAAACCGAGAGGAGAG---------ACGT------------------GTTTTTTGTTGTGAGATACCTCAGTTTAGGAGAAGGCAAAGAAAAGCGCGTGACCTGACCCCATGA-------------------A-AACCC--------TCTCC-----AC----------------------------------------------A------------------------ACA------C--GCT--GTGTGTGTG-CTGTGTGTATCTCG-GCGAGAGTGTGTGSizeHit CountTotal NormTotal
No Reads
droAna3
AAAAAAA-------------A----AA-A-------------------------AAACTCATCCGAGAAATGCAT--GAGA------TT-TTGAG-----------------------AGGAGAG---------ATA-------------------------------------CCTC-------------------AGAAGCGCGTGACCTGACCCCGTCCGTCTGTCCATCTA-----TG-AACCCAACCCGCTTTTCT---CCAAACAC-CAGAGAGGAGGTCGAGAG----------TG--------------------------------------A------C------GGTGTGTGTGAGTGTGTCTCTCTCCCCCTCAAG--TGTCSizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
.............................................................................................................................................................................................................................................................................................................TG--------------------------------------A------C------GGTGTGTGTGAGTGTGTCTCTCT................2711.001010000
...............................................................................................................................................................................................................................................................................C-CAGAGAGGAGGTCGAGA........................................................................................................1811.001000001
..........................................................................................................................GAG---------ATA-------------------------------------CCTC-------------------AGAAGCGCGT...........................................................................................................................................................................................2011.001010000
.......................................................................................................................................................................................................AAGCGCGTGACCTGACCCCGTCC............................................................................................................................................................................2311.001000001
.............................................................................................................................................................................................................................................................................CAC-CAGAGAGGAGGTCGAGAG----------TG--------------------------------------.....................................................2311.001000001
...................................................................................................................................................................................................................................................................CT---CCAAACAC-CAGAGAGGAGGT.............................................................................................................2211.001100000
...............................................................................GA------TT-TTGAG-----------------------AGGAGAG---------ATA-------------------------------------CCT.........................................................................................................................................................................................................................2211.001000001
droBip1
GAAAAAT-------------A----AA---------TCCAACCG-AGA-------ACA-----TGAGAAGTGCAT--GAGA------TT-TTGAG-----------------------AGGAGAG---------ACA-------------------------------------CCTC-------------------AGAGGCGCGTGACCTGACCCGT-CA-G----------------CG-AACCCAGCCCGCTTTTCTC-----------------------------------CTC-TCC----T----CT------------------------CCT------C--TCCGGGTGTGTGTG--TATGTGTCTCTCC-CCTCAAG--AGTCSizeHit CountTotal NormTotal
No Reads
dp5
GAAAAAA-------------A----AA-CAT-----TCAAAACGAGAAAGACAAAAAT-----TGAGAACTGCAT--GAGA------CT-TGGAG-----------------------AGAAGAG---------ATACCCACAAGAGGCAGGCAGTG------------A------AGTG---GAGTGGAGGGAGCGAGAAGCGCGTGACCTGACCCCAAGAC-----------------CG-AACCCAACCCGGTTCTGTTCTCCAGTGTA-CAGACAGGCA-----------------CTCT----GTAT--GAGTATGTAC------------CCTCCT------TCGCTC---------------CCTGTATGCGT-GCACGTG--TGTGSizeHit CountTotal NormTotalV112
Male-body		V043
Embryo		V051
Head		M022
Male-body		M040
Female-body		M059
Embryo		M062
Head
..........................................................................................................................................................GTG------------A------AGTG---GAGTGGAGGGAGC......................................................................................................................................................................................................2111.0010000010
.............................................................................................................................................................................................................................................................................................................................TATGTAC------------CCTCCT------TCGCTC---------------C........................2011.0010100000
..AAAAA-------------A----AA-CAT-----TCAAAACGAGAAAGA.......................................................................................................................................................................................................................................................................................................................................................2611.0010000010
.......................................................................................................................................................GCAGTG------------A------AGTG---GAGTGGAGGGAGC......................................................................................................................................................................................................2411.0010100000
.......................................................AAT-----TGAGAACTGCAT--GAGA------...................................................................................................................................................................................................................................................................................................................1911.0010100000
.........................................................................................................................................................................................................................CAAGAC-----------------CG-AACCCAACCCGGTT.........................................................................................................................................2211.0010000010
...................................................................................................................................................................................................................................................AACCCAACCCGGTTCTGTTCTCCAGT.............................................................................................................................2611.0010000010
droPer2
GAAAAAA-------------AA---AA-CAT-----TCAAAACGAGAAAGACAAAAAT-----TGAGAACTGCAT--GAGA------TT-TGGAG-----------------------AGAAGAG---------ATACCCACAAGAGACGGT-----------------------CCGTG---GAGTGGAGGGAGCGAGAAGCGCGTGACCTGACCCCAAGAC-----------------CG-AACCCAACCCGGTTCTGTTCTCCAGTGTA-CAGACAGGCA-----------------CTCT----GTAT--GAGTATGTAC------------CCTCCT------TCGCTC---------------CCTGTATGCGT-GCACGTG--TGTGSizeHit CountTotal NormTotalV111
Male-body		V042
Embryo		V050
Head		V057
Head		M021
Embryo		M042
Female-body
.....................................................................................................................................................................................................................................................................................................................................................T------TCGCTC---------------CCTGTATGCGT-GCACGTG--T...2611.001000001
...................................................................................................................................................................................................CGAGAAGCGCGTGACCTGACCCCAAGAC-----------------C.........................................................................................................................................................2911.001000010
.....................................................................................................................................................GGT-----------------------CCGTG---GAGTGGAGGGAGC......................................................................................................................................................................................................2111.001100000
....................................................................................................................................................................................................GAGAAGCGCGTGACCTGACCC.................................................................................................................................................................................2111.001000010

Generated: 12/06/2013 at 02:36 PM