ID:

dsi-mir-961

 Coordinate:

2L:5434266-5434376 +

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.7 -34.3

Flybase annnotation

Antisense to intron [Dsim\GD22639-in]

No Repeatable elements found

Sense Strand Reads

GGACACTTTTAACATGGTATCAAATCTGATTCCCCCAAACGAACCCGTAATGTGCTCGTTATCATGGGCCGAGTTACCTTTGATCATCAGTAAGTGAGATTGTTTCTGATACGATTTCGTTTTCTGGCAATCAAAGGAACTCGACTCGACTTGAATCTACAACTACCTCGATGGGGCGCTCAGGCTATAAGGTAGAGAAATTGATGTTGTC
***************************************************************.((((.((((((.((((((((..((((.((((((((((((.......)))))))))))).))))..)))))))))))))).))))...************************************************************ 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 M024
male body
 SRR618934
Ovary		 SRR553486
Ovary		 SRR553485
Ovary		 M025
embryo
 O002
Head
 M053
Female-body		 GSM343915
embryo
 M023
head
 SRR553488
Ovary		 SRR553487
Ovary
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGATGTTGTC 25 0 1 522.00 522 65 243 122 39 22 19 1 5 6 0 0 0
..............................................................................TTTGATCATCAGTAAGTGAGAT............................................................................................................... 22 0 1 481.00 481 58 297 53 25 33 6 1 1 3 4 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGATGTT... 22 0 1 404.00 404 97 22 168 72 36 0 1 3 3 1 0 1
...................................................................................................................TTCGTTTTCTGGCAATCAAAG........................................................................... 21 0 1 290.00 290 224 29 1 11 20 2 3 0 0 0 0 0
...................................................................................................................TTCGTTTTCTGGCAATCAAAGG.......................................................................... 22 0 1 245.00 245 85 39 16 43 49 3 2 4 0 1 3 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGATGTTGT. 24 0 1 244.00 244 2 40 134 37 28 0 0 3 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGATGTTG.. 23 0 1 148.00 148 64 2 57 13 10 0 1 1 0 0 0 0
...................................................................................................................TTCGTTTTCTGGCAATCAA............................................................................. 19 0 1 143.00 143 140 0 0 1 1 0 1 0 0 0 0 0
...................................................................................................................TTCGTTTTCTGGCAATCA.............................................................................. 18 0 1 135.00 135 131 0 0 0 0 0 4 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGATG..... 20 0 1 128.00 128 114 3 10 0 0 0 1 0 0 0 0 0
..............................................................................TTTGATCATCAGTAAGTGAGA................................................................................................................ 21 0 1 125.00 125 9 78 1 20 12 0 0 1 0 4 0 0
...................................................................................................................TTCGTTTTCTGGCAATCAAA............................................................................ 20 0 1 97.00 97 87 3 2 1 3 0 1 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGA....... 18 0 1 97.00 97 95 0 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGAT...... 19 0 1 77.00 77 74 0 1 0 0 0 2 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGATGT.... 21 0 1 75.00 75 47 2 17 3 3 0 3 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATT......... 16 0 1 38.00 38 0 0 38 0 0 0 0 0 0 0 0 0
..............................................................................TTTGATCATCAGTAAGTGAG................................................................................................................. 20 0 1 17.00 17 14 1 1 0 0 0 1 0 0 0 0 0
...................................................................................................................TTCGTTTTCTGGCAATCAAAGGA......................................................................... 23 0 1 15.00 15 4 0 0 11 0 0 0 0 0 0 0 0
..............................................................................TTTGATCATCAGTAAGTGAGAC............................................................................................................... 22 1 1 9.00 9 0 8 0 0 0 0 0 0 0 1 0 0
..............................................................................TTTGATCATCAGTAAGTGAGG................................................................................................................ 21 1 1 9.00 9 0 9 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAAT.......... 15 0 1 8.00 8 0 0 8 0 0 0 0 0 0 0 0 0
..............................................................................TTTGATCATCAGTAAGTGA.................................................................................................................. 19 0 1 6.00 6 2 4 0 0 0 0 0 0 0 0 0 0
..............................................................................TTTGATCATCAGTAAGTGAGATT.............................................................................................................. 23 0 1 5.00 5 3 0 0 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGATGCTGTC 25 1 1 5.00 5 0 0 3 1 0 0 0 0 0 0 0 1
..............................................................................TTTGATCACCAGTAACTGAGAT............................................................................................................... 22 2 1 5.00 5 0 0 1 0 3 0 0 0 0 0 0 1
...................................................................................................................TTCGTTTTCTGGCAATCAAAGGT......................................................................... 23 1 1 4.00 4 0 0 1 0 3 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGATGTTT.. 23 1 1 4.00 4 0 0 2 1 1 0 0 0 0 0 0 0
....................................................................................................................TCGTTTTCTGGCAATCAAAGG.......................................................................... 21 0 1 3.00 3 0 0 0 0 0 0 0 3 0 0 0 0
...................................................................................................................TTCGTTTTCTGGCAATC............................................................................... 17 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGATGTTGC. 24 1 1 3.00 3 0 2 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAATGTAGAGAAATTGATGTTGTC 25 1 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGATATT... 22 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATTG........ 17 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
..............................................................................TTTGATCATCAGTAAGTG................................................................................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAAAAATTGATGTTGT. 24 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................AAGGTAGAGAAATTGATG..... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGATATTGTC 25 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
..............................................................................GTTGATCATCAGTAAGTGAGAT............................................................................................................... 22 1 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGGAGAGAAATTGATGTTGTC 25 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
..............................................................................TTTGATCATCAGTAAGGGAGAT............................................................................................................... 22 1 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TAAGGTAGAGAAATTGATGTTGT. 23 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATCAGGTTGAGAAATTGATGTTGT. 24 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................TTCGTTTTCTGGCAAGCAAAGG.......................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................AGAGAAATTGATGTTGTC 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGATATTGATGTTGTT 25 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGATGTTGTT 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ATCGTTTTCTGGCAATCAAA............................................................................ 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGATTTTGT. 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................TCGTTTTCTGGCAATCAAA............................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TTCGTTTTCTGACAATCAAAGG.......................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................TTCGTTTTCTCGCAATCAAAG........................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................TTCGTTTTCTTGCAATCAAAGG.......................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGAAGAGAAATTGATGTTGTC 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ACAAGGTAGAGAAATTGATGTTGT. 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................TTTGATCATCATTAAGTGAGAT............................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TAGAGAAATTGATGTTGT. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................TTTGATCACCAGTAACTGAGA................................................................................................................ 21 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................TTTGATCATCAGTAAGTTAGAT............................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TTCGGTTTCTGGCAATCAAAG........................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGGGAAATTGATGTTGT. 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TTCGTTTTCTGGCAATCAAGG........................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................AGAAGGTAGAGAAATTGATGTTGT. 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................AAGGTAGAGAAATTGATGTTG.. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAATGTAGAGAAATTGATGTT... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATGAGGTAGAGAAATTGATGTTGTT 25 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................TTCGTTTTCTGGCAATCAAAGT.......................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGTAATTGATGTT... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGATGTTC.. 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................TTGATCATCAGTAAGTGAGAT............................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TTCGTTTTCTGGCAATCAAAAG.......................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGATGTGT.. 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGCAGAGAAATTGATGTTGTC 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGATTTGT.. 23 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................TATCATGGGCCGAGTTACC..................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TTCGTTTTCTGGCCATCAAAGG.......................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TTCGTTTTCTGGCAATCAAAGGAA........................................................................ 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................GTTTTCTGGCAATCAAAGG.......................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TAGAGAAATTGATGTTGTC 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................AGAGAAATTGATGTTGT. 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................TTTGATCATCAGTAAGCGAGAT............................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATTAGGTAGAGAAATTGATGTTGTC 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................TTTCTGGCAATCAAAGG.......................................................................... 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................TTTGCTCATCAGTAAGTGAGAT............................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................................TTGATCATCAGTAAGTGAG................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ATCGTTTTCTGGCAATCAAAGG.......................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................TTTGATCACCAGTAAGTGAGAT............................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAACTGATGTTGT. 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAAGTAGAGAAATTGATGTTGTC 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAACGTAGAGAAATTGATGTTGTC 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TCGTTTTCTGGCAATCAAAGGAA........................................................................ 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGAAGAGAAGTTGATGTTGTC 25 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAAAAATTGATGTT... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAATGTAGAGAAATTGATGTTGT. 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGTTAGAGAAATTGATGTTGTC 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................TTTGATCATCAGTACGTGAGAT............................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TTCGTTTTCTGGCAAT................................................................................ 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGATGTGGTC 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................GTTTTCTGGCAATCAAAGGAAC....................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................TTTGATCATCCGTCAGTGAGAT............................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................TAAGGTAGAGAAATTGATG..... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGGAGAGAAATTGATGTT... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................TTCGTTTTCTGGCAATCAAT............................................................................ 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GGGGCGCTCAGGCTATAAGGTA................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGATGTTGG. 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TTCGTTTTCTGGCAATCAAC............................................................................ 20 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTTGAGAAATTGATGT.... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATCGATGTTGTC 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................TTTTCTGGCAATCAAAGG.......................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGATGCT... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................TCGTTTTCTGGCAATCAAAGGAT........................................................................ 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................CTAAGGTAGAGAAATTGATGTTGT. 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGATGTG... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................ATCATCAGTAAGTGAGAT............................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TAAGGTAGAGAAATTGATGTTGTC 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................TTCGTTTTCTGGCAATCAAAGGTT........................................................................ 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TTCGATTTCTGGCAATCAAAGG.......................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................TTTGACCATCAGTAAGTGAGAT............................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGGGAAATTGATGTT... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................AGGTAGAGAAATTGATGTTGTC 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................TGTGATCATCAGTAAGTGAGAT............................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TATAAGGTAGAGAAATTGATGT.... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................TTTGATCATCAGTAAGTGAGAA............................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................TTCGTTTTTTGGCAATCAAAGG.......................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAGGGTAGAGAAATTGATGTTGTC 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................AGAAGGTAGAGAAATTGATGTTG.. 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAAGTGATGTTGT. 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................TCGTTTTCTGGCAATCAAAGGA......................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................TTCGTTTTTCTGGCAATCAAAGG.......................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TAGAGAAATTGATGTT... 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TAAGGTAGAGAAATTGATGTTG.. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................GAGAAATTGATGTTGTC 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................TTCGTTTTCTGGCACTCAAAGGA......................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGCTATTGATGTT... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................ATAAGGTACAGAAATTGATGTT... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................TTCGTTTTCTGGCAATCAAAGC.......................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATTGATGCTGT. 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
..............................................................................ATTGATCATCAGTAAGTGAGAT............................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TTCGTTTTCTGGCAATCAAAA........................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................AGAGAAATTGATGTTG.. 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGGAGAGATCTTGATGTTGTC 25 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................TAAGGTAGCGAAATT......... 15 1 9 0.78 7 0 0 4 1 0 0 0 0 0 0 2 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATGGATGGC... 22 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................ATAAGTAGAGAAATTGATGTTGT. 23 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................GAAATTGATGTTGTC 15 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................CTTTTATCGTCAGTGAGTGA.................................................................................................................. 20 3 6 0.33 2 0 0 0 2 0 0 0 0 0 0 0 0
...................................................................................................................TTCTTTTTCTGGCATTCAAA............................................................................ 20 2 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................GGCCCTAAGGTAGCGAAATT......... 20 3 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................GTGATCTTTGATCATCGGTA....................................................................................................................... 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................................................ATAAGGTAGAGAAATA......... 16 1 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTGGAGAAATT......... 16 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................ATAAGGTAGATAAATT......... 16 1 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................TTTGATCATCAGTATGAGAT................................................................................................................. 20 3 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................CGCGATGGTGGGCTCAGGC.......................... 19 3 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TAAGGTAGTGAAATT......... 15 1 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................CTTTTATCGTCAGTGAGTG................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................CAGGCGGTCAGGTAGAGAA............ 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
............CATGGTATCAGAGCTG....................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

GACAACATCAATTTCTCTACCTTATAGCCTGAGCGCCCCATCGAGGTAGTTGTAGATTCAAGTCGAGTCGAGTTCCTTTGATTGCCAGAAAACGAAATCGTATCAGAAACAATCTCACTTACTGATGATCAAAGGTAACTCGGCCCATGATAACGAGCACATTACGGGTTCGTTTGGGGGAATCAGATTTGATACCATGTTAAAAGTGTCC
************************************************************...((((.((((((((((((((..((((.((((((((((((.......)))))))))))).))))..)))))))).)))))).)))).*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total
.............................................................................................................................TGATCACTGGTACCTCGGCC.................................................................. 20 3 6 0.17 1
.......................................................................................................................TGCTGTTGATCAAGGGTAAC........................................................................ 20 3 8 0.13 1
...............................................................................................................................................................................GGGGGAATCAGATTC..................... 15 1 9 0.11 1
............................................................................TTTGATTGCCAGACCACG..................................................................................................................... 18 2 9 0.11 1
........................................................................................................................GCTGTTGATCAAGGGTAAC........................................................................ 19 3 20 0.05 1
..........................................................................................................................................CTCGGCCCCGCATAACGA....................................................... 18 3 20 0.05 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 2L:5434216-5434426 + dsi-mir-960 GGACACTTTTAACATGGTATCAAATCTGATTCCCCCAAACGAACCC----G-T-----------AATGTGCT------CG-TTATCAT-----------GGGCCGAGTTACCTTTGATCATCAGTAAGTGAGATTGTT-TCTGA--TACGATTTCGTTTTCTGGCAATCAAAGGAACTCG-ACTCG---ACTTGAAT---CTACAACTACCTCGAT-GGGGCGCTCAGGCTATAAGGTAGAGAAATTGATGTTGTC
droSec2 scaffold_5:3718871-3719081 + dse_179 GGAGACTTTTAACATGGTATCAAATCTGATTCCCCCAAAGGAACCC----G-T-----------AATGTACT------CT-TTATCAA-----------GGCCCGAGTTACCTTTGATCACCAGTAAGTGAGATTGTT-TCTGA--TACGATTTCGTTTTCTGGCAATCAAAGGAACTCG-ACTCG---ACTTGAAT---CTACAACTACCTCGAT-GGGGCATTCAGGCTATAAGGTAGAGAAATTGATGTTGTC
dm3 chr2L:5641130-5641339 + dme-mir-960 GGACACTTTTAACATGGTATCAAATCAGATTCACCTAATAGAATCC----G-T-----------AGTGAGCT------CG-TTATCAA-----------GGGCCGAGTTACCTTTGATCACCAGTAACTGAGATTGTT-TCTGA--TACGGTTTCGTTTTCTGGCAATCAAAAGAACTTGGACTCG---ACTTGAAT---T--CAACTACTTCGAT-GGGGCACTCAGGCTATAAGGTAGAGAAATTGATGCTGTC
droEre2 scaffold_4929:5729604-5729800 + der_24 GGACACTTTAAACGTGGCATCAA-TCCTATTCAACTGATGGAAACC--------------------TG-------------A-TTCAT-----------GGGTCGAGTTACCATTGATCACCGGTTACTGAGGTTGTG-CCACA--TTCGGCTTCGTTTCCTGGCGATCAAAAGAACTCG-ACTCG---GCTCGAAT---C--CCAGTACCTCCTT-GGGGCACTCAAGCTATAAGGTAGAAAAATTGTTGTCTTC
droYak3 2L:13551976-13552177 - dya_92 GGACACTTTTAACGTGGTATCAAATCTGATTCAACCGAAGGAAG-----------------------AAAAT------CTAA-TTCAT-----------GGGTCGAGTTACCATTGATCACCGGTTACTGAGGTTGTT-CCTTC--TTTGGCTTCGTTTTCTGGCGATCAAAAGAACTCG-ACTCG---ACTCGAAT---C--CAACCAACTTCAT-GGGGCACACAAGCTATAAGGTAGAGAAATTGTTGTCTTC
droEug1 scf7180000409063:317439-317654 + GGAGGCTTTTAACATGGCTTCAAATCTGATTCAACCAAGGGGACTT----A-C-----------AGTGTGATAAACAACG-A--TCTT-----------TGGCCGAGTTCTCTTTGATCACCGGTTACTGAGGTTGTT-ACCAG--TCCGGCTTCGTTTTCTGGCGATCAAACAAACTCG-ACTTCAAAACCCAAAC---C--CAACTTCCTCGCC-GGGGCACACAAGCTCTAAGGTAGAGAAAATGTTGTCTTT
droBia1 scf7180000302422:3830677-3830888 + GGACACTTTTAACATGGTGTCAAATCTGAATTACCTGGAG---TGT--GCAATAGTGGTTTCACAAAAA--G------CA-A--TTCG-----------GGGTCGAGTTCTCTTTGATCACCGGTTACTGATGTTGTTTTCCGA--CGCGGCTTCGTTTTCTGGCGATCAAACAAACTCG-ACCCA-------AAGG---C--CAACCAACCCG-T-CGGGCACTCAAGCTATAAGGTAGAGAAATTGTTGTCCCA
droEle1 scf7180000490753:30323-30521 + GGACACTTCTAACATGGTATCAAATCTAATTCAACAAATGAAACG-----C-C---AGTCTCATAGTGA--T------CA-T--CCTT-----------GGGCAGAGTTCTCTTTGATCACCGGTTACTGAGGTTGTT-CTCGC--TTCGGCTTCGTTTTCTGGAGATCAAATAAACTCG-A-------------AC---C--CAATTACCTC----GGGGCACCCAAGCTATAAGGTAGAGAAAATGTTGTCTTC
droRho1 scf7180000778253:33795-33991 - GGACACTTCTAACATGGTATCAAATCTAATTCAACTGAAGA--CC---------------------TGAGAT------CG-TCCT--TA----------GAGCCGAGTTCTCTTTGATCACCGGTTACTGAGGTTGTT-CTCGC--TCCGACTTCGTTTTCTGGCGATCAAATAAACTCG-GCTT-------TGAGT---T--CAACTACCTCCAC-GGGGCACTCAAGCTATAAGGTAGAGAAACTGTTGTCTTC
droFic1 scf7180000453932:197502-197705 - GGAGACTTCTAACATGGCATCAAATCTGATTCATCCGCGG-AAGCTGTGAACCA-----------ACGAA--------CG-TC-TCTG-----------GGGTCGAGTTCTGTTTGATCACCGGTTACTGAGGTCCTT-TCCAC--TCCGACTTCGTTTTCTGGCGATCAAACAAACTCG-GCTCG-------GAAG---C--CATC--CCCCCAC-TGGGCAGTCAAGCTATAAGGTAGAGAAACTCTTGTCTTC
droKik1 scf7180000302389:430894-431106 - GGACACTCGTAACATGGCAGCAAAGCCAAGTCGACGGTGG-AAAGT--GCAACA-----------CTGAA--------GG-----CGT-----------CCGAGGAGTTGGCTTTGATCACCGGTAACTGAGGTCGTC-ACGCCCAATCGACTTCGTTTTCTGGCGATCAAACAAACTCG-TCTCGGA-ACTCCAACATCCTGGAACTCCCTGCCC-AAGGCACTCAAGCTATAAGGTAGAGAAATGGCTGTCTT-
droBip1 scf7180000396572:742679-742894 + GGACACTTTTAACATGGCATCAAATAAAAGTCATCGGCAG-CTGGACTTCA-T-----------CAAGTACT-------A-TT-T--TAGAGCTACATAAGTTCGAGTATTATTTGATCACTGGTTACTGAGGTTGTG-TCTGC--ATCAGCTTCATTTTCTGGCTATCAAATACACACG-ACTTT-------GGGC---C--CAACCACCTGGTCGGGGGCACCCAAGCTATAAGGTAGAGAAAGTAATGTCTTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
GGACACTTTTAACATGGTATCAAATCTGATTCCCCCAAACGAACCC----G-T-----------AATGTGCT------CG-TTATCAT-----------GGGCCGAGTTACCTTTGATCATCAGTAAGTGAGATTGTT-TCTGA--TACGATTTCGTTTTCTGGCAATCAAAGGAACTCG-ACTCG---ACTTGAAT---CTACAACTACCTCGAT-GGGGCGCTCAGGCTATAAGGTAGAGAAATTGATGTTGTCSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTGATGTTGTC251522.0052260243196515223900122
................................................................................................................TTTGATCATCAGTAAGTGAGAT..........................................................................................................................221481.00481342976581133250053
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTGATGTT...221404.00404312209713367210168
........................................................................................................................................................TTCGTTTTCTGGCAATCAAAG...................................................................................211290.0029000292224302011001
........................................................................................................................................................TTCGTTTTCTGGCAATCAAAGG..................................................................................221245.0024501393852449430316
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTGATGTTGT.241244.0024400400203283700134
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTGATGTTG..231148.001480020641110130057
........................................................................................................................................................TTCGTTTTCTGGCAATCAA.....................................................................................191143.0014300001401011000
........................................................................................................................................................TTCGTTTTCTGGCAATCA......................................................................................181135.0013500001314000000
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTGATG.....201128.00128003011410000010
................................................................................................................TTTGATCATCAGTAAGTGAGA...........................................................................................................................211125.00125047809011220001
........................................................................................................................................................TTCGTTTTCTGGCAATCAAA....................................................................................20197.00970030871031002
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTGA.......18197.00970000950000002
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTGAT......19177.00770000742000001
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTGATGT....21175.007500204730330017
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATT.........16138.00380000000000038
................................................................................................................TTTGATCATCAGTAAGTGAG............................................................................................................................20117.00170010141000001
........................................................................................................................................................TTCGTTTTCTGGCAATCAAAGGA.................................................................................23115.00150000400011000
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAAT..........1518.008000000000008
................................................................................................................TTTGATCATCAGTAAGTGA.............................................................................................................................1916.006004020000000
................................................................................................................TTTGATCATCAGTAAGTGAGATT.........................................................................................................................2315.005000030011000
.........................................................................................................................................................TCGTTTTCTGGCAATCAAAGG..................................................................................2113.003000000300000
........................................................................................................................................................TTCGTTTTCTGGCAATC.......................................................................................1713.003000000000003
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTG........1712.002000000000002
................................................................................................................TTTGATCATCAGTAAGTG..............................................................................................................................1812.002000020000000
.........................................................................................................................................................................................................................................AAGGTAGAGAAATTGATG.....1812.002000020000000
........................................................................................................................................................................................................................................TAAGGTAGAGAAATTGATGTTGT.2312.002000000001001
..............................................................................................................................................................................................................................................AGAGAAATTGATGTTGTC1811.001000000000001
.........................................................................................................................................................TCGTTTTCTGGCAATCAAA....................................................................................1911.001000010000000
.............................................................................................................................................................................................................................................TAGAGAAATTGATGTTGT.1811.001000000000001
.........................................................................................................................................................................................................................................AAGGTAGAGAAATTGATGTTG..2111.001000010000000
.................................................................................................................TTGATCATCAGTAAGTGAGAT..........................................................................................................................2111.001000010000000
..................................................................................TATCAT-----------GGGCCGAGTTACC................................................................................................................................................1911.001000010000000
........................................................................................................................................................TTCGTTTTCTGGCAATCAAAGGAA................................................................................2411.001000000001000
...........................................................................................................................................................GTTTTCTGGCAATCAAAGG..................................................................................1911.001000000000001
.............................................................................................................................................................................................................................................TAGAGAAATTGATGTTGTC1911.001000000000001
..............................................................................................................................................................................................................................................AGAGAAATTGATGTTGT.1711.001000000000001
.............................................................................................................................................................TTTCTGGCAATCAAAGG..................................................................................1711.001000000000001
.................................................................................................................TTGATCATCAGTAAGTGAG............................................................................................................................1911.001000010000000
.........................................................................................................................................................TCGTTTTCTGGCAATCAAAGGAA................................................................................2311.001000000001000
........................................................................................................................................................TTCGTTTTCTGGCAAT........................................................................................1611.001000000000001
...........................................................................................................................................................GTTTTCTGGCAATCAAAGGAAC...............................................................................2211.001001000000000
........................................................................................................................................................................................................................................TAAGGTAGAGAAATTGATG.....1911.001000010000000
.........................................................................................................................................................................................................................GGGGCGCTCAGGCTATAAGGTA.................2211.001000010000000
............................................................................................................................................................TTTTCTGGCAATCAAAGG..................................................................................1811.001000000000001
....................................................................................................................ATCATCAGTAAGTGAGAT..........................................................................................................................1811.001000000000001
........................................................................................................................................................................................................................................TAAGGTAGAGAAATTGATGTTGTC2411.001000000010000
..........................................................................................................................................................................................................................................AGGTAGAGAAATTGATGTTGTC2211.001000000000001
......................................................................................................................................................................................................................................TATAAGGTAGAGAAATTGATGT....2211.001000000000001
.........................................................................................................................................................TCGTTTTCTGGCAATCAAAGGA.................................................................................2211.001000000001000
.............................................................................................................................................................................................................................................TAGAGAAATTGATGTT...1611.001000000000001
........................................................................................................................................................................................................................................TAAGGTAGAGAAATTGATGTTG..2211.001000000000001
...............................................................................................................................................................................................................................................GAGAAATTGATGTTGTC1711.001000000000001
..............................................................................................................................................................................................................................................AGAGAAATTGATGTTG..1611.001000000000001
.................................................................................................................................................................................................................................................GAAATTGATGTTGTC1520.501000000000001
droSec2
GGAGACTTTTAACATGGTATCAAATCTGATTCCCCCAAAGGAACCC----G-T-----------AATGTACT------CT-TTATCAA-----------GGCCCGAGTTACCTTTGATCACCAGTAAGTGAGATTGTT-TCTGA--TACGATTTCGTTTTCTGGCAATCAAAGGAACTCG-ACTCG---ACTTGAAT---CTACAACTACCTCGAT-GGGGCATTCAGGCTATAAGGTAGAGAAATTGATGTTGTCSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTGATGTT...221819.0081964915767
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTGATGTTGT.241764.007646976142
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTGATGTTGTC251754.0075454220093
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTGATGTTG..231393.003933761034
........................................................................................................................................................TTCGTTTTCTGGCAATCAAAGG..................................................................................221372.00372246673029
................................................................................................................TTTGATCACCAGTAAGTGAGAT..........................................................................................................................221122.00122902561
........................................................................................................................................................TTCGTTTTCTGGCAATCAAAG...................................................................................21143.004333343
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTGATGT....21128.002822402
................................................................................................................TTTGATCACCAGTAAGTGAGA...........................................................................................................................21122.002219201
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTGATG.....2017.0077000
........................................................................................................................................................................................................................................TAAGGTAGAGAAATTGATGTTGTC2414.0044000
........................................................................................................................................................................................................................................TAAGGTAGAGAAATTGATGTTGT.2314.0043100
........................................................................................................................................................................................................................................TAAGGTAGAGAAATTGATGTTG..2213.0033000
.........................................................................................................................................................TCGTTTTCTGGCAATCAAAGG..................................................................................2111.0010001
................................................................................................................TTTGATCACCAGTAAGTGAGATT.........................................................................................................................2311.0011000
.................................................................................TTATCAA-----------GGCCCGAGTTACC................................................................................................................................................2011.0011000
........................................................................................................................................................TTCGTTTTCTGGCAATCAAAGGA.................................................................................2311.0011000
........................................................................................................................................................TTCGTTTTCTGGCAATCAAA....................................................................................2011.0011000
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTGA.......1811.0010100
........................................................................................................................................................................................................................................TAAGGTAGAGAAATTGATGTT...2111.0010100
..........................................................................................................................................................................................................................................AGGTAGAGAAATTGATGTT...1911.0011000
.................................................................................................................TTGATCACCAGTAAGTGAGAT..........................................................................................................................2111.0010100
droEre2
GGACACTTTAAACGTGGCATCAA-TCCTATTCAACTGATGGAAACC--------------------TG-------------A-TTCAT-----------GGGTCGAGTTACCATTGATCACCGGTTACTGAGGTTGTG-CCACA--TTCGGCTTCGTTTCCTGGCGATCAAAAGAACTCG-ACTCG---GCTCGAAT---C--CCAGTACCTCCTT-GGGGCACTCAAGCTATAAGGTAGAAAAATTGTTGTCTTCSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
.......................................................................................................................................................................................................................................ATAAGGTAGAAAAATTGTTGTC...2217500.00750033567007292211
................................................................................................................ATTGATCACCGGTTACTGAGG...........................................................................................................................2111689.00168906153514350
................................................................................................................ATTGATCACCGGTTACTGAGGT..........................................................................................................................2211540.00154014141611720
.......................................................................................................................................................................................................................................ATAAGGTAGAAAAATTGTTGT....211605.00605015495131
.......................................................................................................................................................................................................................................ATAAGGTAGAAAAATTGTTGTCT..231300.00300042583170
................................................................................................................ATTGATCACCGGTTACTGAG............................................................................................................................201149.0014902139800
................................................................................................................ATTGATCACCGGTTACTGAGGTT.........................................................................................................................231142.00142001281310
.......................................................................................................................................................................................................................................ATAAGGTAGAAAAATTGTTG.....20182.00820171910
........................................................................................................................................................................................................................................TAAGGTAGAAAAATTGTTGTCT..22168.00680065210
................................................................................................................ATTGATCACCGGTTACTGA.............................................................................................................................1919.009008100
...............................................................................................................CATTGATCACCGGTTACTGAGG...........................................................................................................................2219.009008100
........................................................................................................................................................................................................................................TAAGGTAGAAAAATTGTTGTC...2117.007005110
...............................................................................................................CATTGATCACCGGTTACTGAGGT..........................................................................................................................2316.006005100
.........................................................................................................................................................................................................................................AAGGTAGAAAAATTGTTGTC...2016.006006000
........................................................................................................................................................TTCGTTTCCTGGCGATCAAAAG..................................................................................2215.005005000
........................................................................................................................................................TTCGTTTCCTGGCGATCAAA....................................................................................2013.003002010
................................................................................................................ATTGATCACCGGTTACTG..............................................................................................................................1811.001000100
.................................................................................................................TTGATCACCGGTTACTGAGGT..........................................................................................................................2111.001001000
.................................................................................................................TTGATCACCGGTTACTGAGGTTGTG-.....................................................................................................................2511.001001000
........................................................................................................................................................TTCGTTTCCTGGCGATCAA.....................................................................................1911.001001000
.................................................................................................................TTGATCACCGGTTACTGAGG...........................................................................................................................2011.001000010
.................................................................................................................TTGATCACCGGTTACTGAG............................................................................................................................1911.001000010
........................................................................................................................................................................................................................................TAAGGTAGAAAAATTGTTGTCTTC2411.001001000
........................................................................................................................................................................................................................................TAAGGTAGAAAAATTGTTGT....2011.001001000
........................................................................................................................................................................................................................................TAAGGTAGAAAAATTGTTGTCTT.2311.001000100
......................................................................................................................................TGTG-CCACA--TTCGGCTTCGTTT.................................................................................................2211.001001000
........................................................................................................................................................TTCGTTTCCTGGCGATCAAAA...................................................................................2111.001000100
droYak3
GGACACTTTTAACGTGGTATCAAATCTGATTCAACCGAAGGAAG-----------------------AAAAT------CTAA-TTCAT-----------GGGTCGAGTTACCATTGATCACCGGTTACTGAGGTTGTT-CCTTC--TTTGGCTTCGTTTTCTGGCGATCAAAAGAACTCG-ACTCG---ACTCGAAT---C--CAACCAACTTCAT-GGGGCACACAAGCTATAAGGTAGAGAAATTGTTGTCTTCSizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTGTTGTC...2211280.00128011115816305123
................................................................................................................ATTGATCACCGGTTACTGAGG...........................................................................................................................211645.006450161049183
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTGTTGTCT..231633.0063300600213144
................................................................................................................ATTGATCACCGGTTACTGAGGT..........................................................................................................................221279.0027901244191212
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTGTTGT....211129.001290010721181
................................................................................................................ATTGATCACCGGTTACTGAG............................................................................................................................20181.008100663291
................................................................................................................ATTGATCACCGGTTACTGAGGTT.........................................................................................................................23152.005200471310
........................................................................................................................................................................................................................................TAAGGTAGAGAAATTGTTGTCT..22145.004500430020
...............................................................................................................CATTGATCACCGGTTACTGAGG...........................................................................................................................22124.002400240000
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTGTTG.....20123.002300201020
...............................................................................................................CATTGATCACCGGTTACTGAGGT..........................................................................................................................23110.00100090100
................................................................................................................ATTGATCACCGGTTACTGA.............................................................................................................................1912.0020110000
.................................................................................................................TTGATCACCGGTTACTGAGG...........................................................................................................................2012.0020020000
........................................................................................................................................................................................................................................TAAGGTAGAGAAATTGTTGTC...2112.0020000020
...............................................................................................................CATTGATCACCGGTTACTGAG............................................................................................................................2112.0020020000
.........................................................................................................................................................................................................................................AAGGTAGAGAAATTGTTGTCT..2111.0010010000
.................................................................................................................TTGATCACCGGTTACTGAGGT..........................................................................................................................2111.0010010000
...................................................................................................................GATCACCGGTTACTGAGG...........................................................................................................................1811.0010010000
..................................................................................................................TGATCACCGGTTACTGAGG...........................................................................................................................1911.0010010000
......................................................................................................................................................................................................................................TATAAGGTAGAGAAATTGTTGTCT..2411.0010010000
..........................................................................................................................................................................................................................................AGGTAGAGAAATTGTTGTC...1911.0010010000
........................................................................................................................................................TTCGTTTTCTGGCGATCAAAA...................................................................................2111.0010010000
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTGT.......1811.0010100000
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTGTT......1911.0010010000
.........................................................................................................................................................................................................................................AAGGTAGAGAAATTGTTGTC...2011.0010000001
.......................................................................................................................................................................................................................................ATAAGGTAGAGAAATTGTTGTCTT.2411.0010010000
droEug1
GGAGGCTTTTAACATGGCTTCAAATCTGATTCAACCAAGGGGACTT----A-C-----------AGTGTGATAAACAACG-A--TCTT-----------TGGCCGAGTTCTCTTTGATCACCGGTTACTGAGGTTGTT-ACCAG--TCCGGCTTCGTTTTCTGGCGATCAAACAAACTCG-ACTTCAAAACCCAAAC---C--CAACTTCCTCGCC-GGGGCACACAAGCTCTAAGGTAGAGAAAATGTTGTCTTTSizeHit CountTotal NormTotal
No Reads
droBia1
GGACACTTTTAACATGGTGTCAAATCTGAATTACCTGGAG---TGT--GCAATAGTGGTTTCACAAAAA--G------CA-A--TTCG-----------GGGTCGAGTTCTCTTTGATCACCGGTTACTGATGTTGTTTTCCGA--CGCGGCTTCGTTTTCTGGCGATCAAACAAACTCG-ACCCA-------AAGG---C--CAACCAACCCG-T-CGGGCACTCAAGCTATAAGGTAGAGAAATTGTTGTCCCASizeHit CountTotal NormTotal
No Reads
droEle1
GGACACTTCTAACATGGTATCAAATCTAATTCAACAAATGAAACG-----C-C---AGTCTCATAGTGA--T------CA-T--CCTT-----------GGGCAGAGTTCTCTTTGATCACCGGTTACTGAGGTTGTT-CTCGC--TTCGGCTTCGTTTTCTGGAGATCAAATAAACTCG-A-------------AC---C--CAATTACCTC----GGGGCACCCAAGCTATAAGGTAGAGAAAATGTTGTCTTCSizeHit CountTotal NormTotal
No Reads
droRho1
GGACACTTCTAACATGGTATCAAATCTAATTCAACTGAAGA--CC---------------------TGAGAT------CG-TCCT--TA----------GAGCCGAGTTCTCTTTGATCACCGGTTACTGAGGTTGTT-CTCGC--TCCGACTTCGTTTTCTGGCGATCAAATAAACTCG-GCTT-------TGAGT---T--CAACTACCTCCAC-GGGGCACTCAAGCTATAAGGTAGAGAAACTGTTGTCTTCSizeHit CountTotal NormTotal
No Reads
droFic1
GGAGACTTCTAACATGGCATCAAATCTGATTCATCCGCGG-AAGCTGTGAACCA-----------ACGAA--------CG-TC-TCTG-----------GGGTCGAGTTCTGTTTGATCACCGGTTACTGAGGTCCTT-TCCAC--TCCGACTTCGTTTTCTGGCGATCAAACAAACTCG-GCTCG-------GAAG---C--CATC--CCCCCAC-TGGGCAGTCAAGCTATAAGGTAGAGAAACTCTTGTCTTCSizeHit CountTotal NormTotal
No Reads
droKik1
GGACACTCGTAACATGGCAGCAAAGCCAAGTCGACGGTGG-AAAGT--GCAACA-----------CTGAA--------GG-----CGT-----------CCGAGGAGTTGGCTTTGATCACCGGTAACTGAGGTCGTC-ACGCCCAATCGACTTCGTTTTCTGGCGATCAAACAAACTCG-TCTCGGA-ACTCCAACATCCTGGAACTCCCTGCCC-AAGGCACTCAAGCTATAAGGTAGAGAAATGGCTGTCTT-SizeHit CountTotal NormTotal
No Reads
droBip1
GGACACTTTTAACATGGCATCAAATAAAAGTCATCGGCAG-CTGGACTTCA-T-----------CAAGTACT-------A-TT-T--TAGAGCTACATAAGTTCGAGTATTATTTGATCACTGGTTACTGAGGTTGTG-TCTGC--ATCAGCTTCATTTTCTGGCTATCAAATACACACG-ACTTT-------GGGC---C--CAACCACCTGGTCGGGGGCACCCAAGCTATAAGGTAGAGAAAGTAATGTCTTCSizeHit CountTotal NormTotal
No Reads

Generated: 12/06/2013 at 02:36 PM