ID:

dsi-mir-955

 Coordinate:

3L:2834569-2834683 +

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-33.4 -33.4 -33.2

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

ATTAAATAATAAAATTGTTTGATGTAGGTGGGGTAAAATAGGTAAAGAACTCTTTTTGGCCAGCTAATCAACTCCATCGTGCAGAGGTTTGAGTGTCCTGTGTTTTGCCTAATCGCATTCAATTTCTGCACGGTAGAGATGGTACGCTTAGAAACAACCTAAAGAAATTATTACGTATATATGTATATAAAACTTAAAATATATGGTAATATTAA
***********************************************************..(((..((((.(((.((((((((((((((.((((((..................)))))))))))))))))))).))).))))..)))******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 GSM343915
embryo
 SRR553488
Ovary		 SRR553487
Ovary		 O002
Head
 SRR618934
Ovary		 SRR553486
Ovary		 M023
head
 SRR553485
Ovary		 O001
Testis
 M053
Female-body
..........................................................................CATCGTGCAGAGGTTTGAGTGTC...................................................................................................................... 23 0 1 870.00 870 436 395 13 5 9 3 0 5 0 3 1
..........................................................................CATCGTGCAGAGGTTTGAGTGT....................................................................................................................... 22 0 1 165.00 165 41 84 11 13 1 5 6 2 2 0 0
...........................................................................ATCGTGCAGAGGTTTGAGTGTC...................................................................................................................... 22 0 1 160.00 160 124 29 2 0 3 1 0 1 0 0 0
...................................................................................................................CATTCAATTTCTGCACGGTAGT.............................................................................. 22 1 1 110.00 110 85 4 7 6 0 0 0 5 2 0 0
..........................................................................CATCGTGCAGAGGTTTGAGTG........................................................................................................................ 21 0 1 86.00 86 13 60 1 0 2 2 2 3 1 2 0
........................................................TGGCCAGCTAATCAACTC............................................................................................................................................. 18 0 1 64.00 64 64 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CATTCAATTTCTGCACGG.................................................................................. 18 0 1 51.00 51 50 0 0 0 1 0 0 0 0 0 0
...................................................................................................................CATTCAATTTCTGCACGGTAGA.............................................................................. 22 0 1 49.00 49 14 17 5 9 0 0 2 0 2 0 0
...................................................................................................................CATTCAATTTCTGCACGGTAG............................................................................... 21 0 1 37.00 37 14 0 15 3 1 1 2 0 1 0 0
.......................................................TTGGCCAGCTAATCAACTC............................................................................................................................................. 19 0 1 33.00 33 32 1 0 0 0 0 0 0 0 0 0
...........................................................................ATCGTGCAGAGGTTTGAGTGT....................................................................................................................... 21 0 1 27.00 27 8 4 2 1 0 4 4 2 2 0 0
........................................................TGGCCAGCTAATCAACTCC............................................................................................................................................ 19 0 1 17.00 17 8 8 0 0 1 0 0 0 0 0 0
...........................................................................ATCGTGCAGAGGTTTGAGTGTCC..................................................................................................................... 23 0 1 14.00 14 5 6 0 0 1 0 0 1 0 1 0
..........................................................................CATCGTGCAGAGGTTTGAGTGG....................................................................................................................... 22 1 1 13.00 13 11 0 0 0 0 0 0 2 0 0 0
..........................................................................CATCGTGCAGAGGTTTGAGT......................................................................................................................... 20 0 1 13.00 13 0 3 1 2 1 1 1 0 4 0 0
......................................................TTTGGCCAGCTAATCAACTC............................................................................................................................................. 20 0 1 12.00 12 12 0 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGAG.......................................................................................................................... 19 0 1 11.00 11 6 0 0 0 0 0 1 2 0 2 0
...................................................................................................................CATTCAATTTCTGCACGGTAGG.............................................................................. 22 1 1 8.00 8 6 1 0 0 0 0 0 1 0 0 0
.....................................................TTTTGGCCAGCTAATCAACTC............................................................................................................................................. 21 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGCGGTTTGAGTGTC...................................................................................................................... 23 1 1 6.00 6 0 6 0 0 0 0 0 0 0 0 0
...........................................................................ATCGTGCAGAGGTTTGAGTGTCCTG................................................................................................................... 25 0 1 6.00 6 4 2 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGA........................................................................................................................... 18 0 1 6.00 6 0 0 0 0 4 0 0 0 0 2 0
...........................................................................ATCGTGCAGAGGTTTGAGTGTCT..................................................................................................................... 23 1 1 5.00 5 4 1 0 0 0 0 0 0 0 0 0
...................................................................................................................CATTCAATTTCTGCACGGTAGC.............................................................................. 22 1 1 5.00 5 4 0 1 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGATGTTTGAGTGTC...................................................................................................................... 23 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGAGCGTC...................................................................................................................... 23 1 1 5.00 5 4 1 0 0 0 0 0 0 0 0 0
.......................................................TTGGCCAGCTAATCAACTCC............................................................................................................................................ 20 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGAGGGTC...................................................................................................................... 23 1 1 5.00 5 4 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGAGTGTCT..................................................................................................................... 24 1 1 5.00 5 3 2 0 0 0 0 0 0 0 0 0
..........................................................................CATCTTGCAGAGGTTTGAGTGTC...................................................................................................................... 23 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CATTCAATTTCTGCACGGTAGTT............................................................................. 23 2 1 4.00 4 1 0 1 1 0 0 0 0 1 0 0
..........................................................................CATCGTGCAGAGGTTTGAGTGA....................................................................................................................... 22 1 1 4.00 4 0 0 0 0 0 0 2 0 2 0 0
..........................................................................CATCGTGCAGAGGTTTGAGTGC....................................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCATAGGTTTGAGTGTC...................................................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
...........................................................................ATCGTGCAGAGGTTTGAGT......................................................................................................................... 19 0 1 3.00 3 0 0 0 0 0 3 0 0 0 0 0
...........................................................................ATCGTGCAGAGGTTTGAGTGTCCT.................................................................................................................... 24 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGAGTGAC...................................................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGAGTGTCC..................................................................................................................... 24 0 1 3.00 3 1 0 1 0 1 0 0 0 0 0 0
........................................................TTGCCAGCTAATCAACTCC............................................................................................................................................ 19 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGTGTGTC...................................................................................................................... 23 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
..........................................................................CATCCTGCAGAGGTTTGAGTGTC...................................................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................CATTCAATTTCTGCACGGTGG............................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGAGGGT....................................................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGGGCAGAGGTTTGAGTGTC...................................................................................................................... 23 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
...........................................................................ATCTTGCAGAGGTTTGAGTGTC...................................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
...........................................................................ATCGTGCAGAGGTTTGAGTGTCA..................................................................................................................... 23 1 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0
...........................................................................ATCGTGCATAGGTTTGAGTGTC...................................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CACTCAATTTCTGCACGGTAGT.............................................................................. 22 2 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGGGCAGAGGTTTGAGGGTC...................................................................................................................... 23 2 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
............................................................................TCGTGCAGAGGTTTGAGTGTCCT.................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGACGTTTGAGTGTC...................................................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
...........................................................................ATCGTGCAGAGGTTTGAGTG........................................................................................................................ 20 0 1 2.00 2 0 0 0 0 1 0 0 1 0 0 0
..........................................................................CATCGTGCAGAGGTTTCAGTGTC...................................................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGAGTGTG...................................................................................................................... 23 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
..........................................................................CATCGCGCAGAGGTTTGAGTGTC...................................................................................................................... 23 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
......................................................TTTGGCCAGCTAATCAACTCC............................................................................................................................................ 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CATTCAATTTCTTCACGGTAGA.............................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
...........................................................................ATCGTGCAGAGGTTTGAGGGTC...................................................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGCTTGAGTGTC...................................................................................................................... 23 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGCGGCTTTAGTGTC...................................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGTGGCTTGTGTGTCC..................................................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGCGGTTTTTGTGTC...................................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGAGTGTT...................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTCCAGAGGTTTGAGTGTC...................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGAGAGTC...................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................TCGTGCAGAGGTTTGAGTGTCC..................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................ATCGTGCAGAGGTTTGAGTGC....................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................CATCATGCAGAGGTTTGAGTGT....................................................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..........................................................................CATCGTGCGGAGGTTTGAGTGT....................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CAGCGTGCAGAGGATTGAGTGGC...................................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................CATTCAATTTCTGCACGGTAGTA............................................................................. 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCGGAGGTTTGAGTGTC...................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGCGTGTC...................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CCTCGTGCAGAGGTTTGAGTGTC...................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCACAGGTTTGAGTGTC...................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................AATCGTGCAGAGGTTTGAGTG........................................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGCTTGAGGGTC...................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGCGGTTTGAGTGTCT..................................................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGTGGGTTGAGTGTC...................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................ATTCAATTTCTGCACGGTAGA.............................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGTGTG........................................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................TGGCCAGCTAATCAACTCCC........................................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTAGAGTGTC...................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................TATCGTGCAGAGGTTTGAGTGTC...................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGT........................................................................................................................... 18 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................CATTCAATTTCTGCACTGTAGT.............................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................ATCCTGCAGAGGTTTGAGTGTC...................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................GTGCAGAGGTTTGAGTGTC...................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..........................................................................CATCGTGCAGAGGGTTGAATGTC...................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGGGCAGAGGTTTGAGTGT....................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCCGAGGTTTGAGTGG....................................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................CATTCAATTTCTGCACGGTA................................................................................ 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTTAGTGT....................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................AATCGTGCAGAGGGTTGAGTGTC...................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTAAGTG........................................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGATTGTGTGTC...................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................AATCGTGCAGAGGTTTGCGTG........................................................................................................................ 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGCGCGTC...................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGCGGTTTGAGTGT....................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CGTCGTGCAGAGGTTTGAGTGT....................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................CATTCAATTTCCGCACGGTAGT.............................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................CATCATGCAGAGGTTTGAGTG........................................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................AGCGTGCAGAAGTTTGAGTGTCC..................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................ATCGTGCAGAGGTTTGAGAGTC...................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGAAGAGGGTTGAGTGTC...................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................ATCATGCAGAGGTTTGAGTGTC...................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................ATCGTGCAGAGGTTTGAGTGTT...................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGC........................................................................................................................... 18 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
..........................................................................TATCGTGCAGAGGTTTGAGGGTCG..................................................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGGGTGTC...................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGAGTCT....................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..........................................................................CATCGTGCAGATGTTTGAGTGT....................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTCGAGTGTC...................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGGTTGAGTGTC...................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................GTGCAGAGGTTTGAGT......................................................................................................................... 16 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..........................................................................CATCGTGCAGAGCTTTGAGTGTC...................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................TTGGCCAGCTAATCGACTCC............................................................................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGAGGGG....................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCCGCGGTTTTAGTGTC...................................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGCGGTTTGCGTGT....................................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCATGCAGAGGTTTGAGTGTC...................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGGGGTTTGAGTGTC...................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGAGA......................................................................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
..........................................................................CATCGAGCAGATGTCTGAGTGT....................................................................................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................GTCGTGCAGAGGTTTGAGTGTC...................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGGTTGCGTG........................................................................................................................ 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................CATTCAATTTCTGCACGGGAGT.............................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................ATCGTGCAGAGGTTTGAGTGG....................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................CATAGTGCAGCGGTTTGATTGTC...................................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CACCGTGCAGAGGTTTGAGTGTC...................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGAGTGGC...................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGGGCAGCGGCTTGAGTGTC...................................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGAGAGTA...................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGGTTGTGTGT....................................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGATGTTTTAGTGTG...................................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTTGAGGGTCT..................................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGTAGAGGTTTGAGTTTT...................................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................CAATCAATTTCTGCACGGTAGT.............................................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTGTGAGTGTA...................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................CATTCACTTTCTGCACGGTAGT.............................................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGATGTTTGAGTGG....................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................ATCGTGCAGAGGTTTTAGTGTC...................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCGGAGGGTTGAGGGTC...................................................................................................................... 23 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGATTCACTG........................................................................................................................ 21 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................CATCGTGCAGAGGTTAGTGTC........................................................................................................................ 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
................................................ACTCTTTTTGGCCAGCT...................................................................................................................................................... 17 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
...........................................................................ATAGTGCAGAGGTTTGTGTGTT...................................................................................................................... 22 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TCGCGATGGTAGGCTTAGAA.............................................................. 20 3 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0
..........................................................................AATCGGGCAGAGGGTTGAGTG........................................................................................................................ 21 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................AATCGCGCAGAGGGTTGAGT......................................................................................................................... 20 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0
..TAAATAATAAAATTG...................................................................................................................................................................................................... 15 0 18 0.06 1 0 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

TTAATATTACCATATATTTTAAGTTTTATATACATATATACGTAATAATTTCTTTAGGTTGTTTCTAAGCGTACCATCTCTACCGTGCAGAAATTGAATGCGATTAGGCAAAACACAGGACACTCAAACCTCTGCACGATGGAGTTGATTAGCTGGCCAAAAAGAGTTCTTTACCTATTTTACCCCACCTACATCAAACAATTTTATTATTTAAT
*******************************************************************(((..((((.(((.((((((((((((((((((((..................)))))).)))))))))))))).))).))))..)))..*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
Female-body
................................................................CTAAGCGTACCATCTCTACCGTGC............................................................................................................................... 24 0 1 1.00 1 1
........................................................................................................................................................CTGGGCAAATAGAGTTCTT............................................ 19 2 5 0.20 1 0
...........................................AATGATTTCTTTCGGTTGCTT....................................................................................................................................................... 21 3 14 0.07 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 3L:2834519-2834733 + dsi-mir-955 A--TTA-AATA-AT---A--------AA--A--TTGTTTGATGT------AGGTGGGGTAAAATAG---GTAAAGAA--CTCTT-----TTTGGCCAGCTAATCAACTCCATCGTGCAGAGGTTTGAGTGTCCTGTGTTTTGCCTAA-TCGCATTCAATTTCTGCACGGTAGAGATGGTA-CGCTTAGAAACAACCTAAAGAAATTA----TTACGTATATATG----------T----------------------------ATATAAAACTTAA--------------------AATAT----------------ATGG----TA-----ATATTAA
droSec2 scaffold_2:3291301-3291510 + A--TTA-AATA-AT---A--------AA--A--TTGTTTGATGT------AGGTGGGGTAAAATAG---GTAATAAA--CACTT-----TTTGGTCAGCTAATCAACTCCATCGTGCAGAGGTTTGAGTGTCCTGTGTTTTGCCTAA-TCGCATTCAATTTCTGCAG---AGAGATGGTA-CGCTTAGAAACAACCTACAAAAATTG----TTACTTATATATG----------C----------------------------ATATAAAACTTGA--------------------AATATA------------------G----TA-----ATTTTAA
dm3 chr3L:3298998-3299206 + dme-mir-955 A--TTA-AATA-AC---A--------AA--A--TTGTTTGATGT------AGGTGGGGTAAAATAG---GTAAGGAA--CACTT-----TTTGGCCAGCTAATCAACTCCATCGTGCAGAGGTTTGAGTGTCCTGTGTTTTGCCTAA-TCGCATTCAATTTCTGAACGGTAGAGATGGTA-CGCTTAGAAACAACCTAAAACAATTT----TATCTTATAGTTG---------------------------------------------AACTTAA--------------------AATAAAGTAAC-------------------A-----ATATTTA
droEre2 scaffold_4784:5981949-5982140 + der_54 A--TGA-AATA-AT---A--------CA--T--TTGTGTGCTAT------AATTGG-GTAAAATAA---GA-AGGAATAC-ACT-----TTTGTCCAGCTAATCAACTCCATCGTGCAGAGGTTTGAGTGTCTTGTGTGTTGCCTAA-TCGCATTCAATTTCTGAACGGTAGAGATGGTA-CGCTTAGAAACAACCTAAAGCAAGTA----TTAATT----------------------------------------------------------------------------------------------------ATGG----TCAAATAATAG-TA
droYak3 3L:3844706-3844886 + dya_46 A--TTA-AATA-TT---A--------CA--G--TTGTTTGCTAT------AGGCGG-GTAAAATAA---GTAAA----------------GTAAACAGCTAATCAACTCCATCGTGCAGAAGTTTGAGTGTCCTGTGTGTTGCCTAA-TCGCATTCAATTTCTGAACGGTAGAGATGGTA-CGCTTAGAAACAACCTAAAATGAGTATATATAAACT----------------------------------------------------------------------------------------------------ATGG----TC-----AAATT--
droEug1 scf7180000409466:1024668-1024912 + AAATTA-AATA-CC---T--------AA--A--TTTTTTGG---GATTGTAGTTGGGATA-TTT----------------------TATTTTTGCCAGCTAATCAACTCCATCGTGCAGAGGTTTGAGTGTCCTGTGACTTGCCAAA-TCGCATTCAATCTCTGAACGGTAGAGATGGTC-AGCTTAAAAGCAACCTAAAGACTT----------------AATCAAACTTTAGTTAAGAACATTAATTTATTTACCCAA-----------------------AATTAACACGGATTTTT----AACTATATAGA-CTTCGATTTGA-----AGCCTGA
droBia1 scf7180000302428:2658356-2658578 + A--TCA-AAAG-TT---T--------TA--T--ATTTTTGCCTA------AGGTGG-GTAGAATAATAATTACAGGATTTGCTTT-TCGTTTGGTCAGCTCATCAGCTCCATCGTGCAGAGGTTTGAGTGTCCTGTATCTTGCCAAA-TCGCATTCAATCTCTGAACGGTAGAGATGGTC-TGCTTCAAAGCAACATAAAACATTAA----AAACATT---------------------------AA------------------------CTTAT--------------------TTTTAAGTAACT------A-CTTTGTTTCCC-----ATCTTTA
droTak1 scf7180000415378:64747-64976 - A--TGA-AATG-TT---G--------ATATG--ATCTTTGCGTT-A----AGGTGG-GTAGAATAA---TTACAGGG--TATTTTTTGTTTCGGCCAGCTAATCAACTCCATCGTGCAGAGGTTTGAGTGTCCTGTGTCTCGACAAA-TCGCATTCAATCTCTGAACGGTAGAGATGGTA-TGCTCAAAAGCAACATAAATAAATTC----CTAATT-------------CCTAAA-----------------AATTC-----CTAA-------------AAAAAATTGCAAT---TGCAATGTAAAG------TTAA------------------TGG
droEle1 scf7180000491249:1960450-1960664 - A--ATCAAATC-GT--TA--------AA--T--TTGTTTGACTT------AGGTGG-GTAAAATTATT-GTGGAAGG--TATTT-----GTCGGCCAGCTTTTCAACTCCATCGTGCAGAGGTTTGAGTGTCCTGTGTCTTGCCAAT-TCGCATTCAATCTCTGAACGATAGAGATGGTC-AGCTTAAAAGCAACATAAGATCAAAA----TTACATAAACATA----------AA---------------------------------AACTTGACTAAAATAATTAACA-------------------------------------------GTTGA
droRho1 scf7180000757703:602-827 - A--AAA-CAATTTTGTTA--------AA--G--TTGTTTGATTT------AGATGG-GTAAAATTA---TTATTTAA--AAATT-----TCTGGCTAGCTAATCAACTCCATCGTGCAGAGGTTTGAGTGTCCTGTGTCTTGCCAAT-CCGCATTCAATCTTTGAACGATAGATATGGTC-AGCTTAAATGCAACCTAAACATCT----------------ATTCGAAATTTAGAT-----------------TACCTAAATGACAAAAAATTTAA--------------------GGTTT----------------AAGG-----A-----ATATTAA
droFic1 scf7180000454105:1620270-1620429 + A--TCA-AATT-CT--AA--------AG--T--ATTTTTGCT-T------GAGTGG-GTGAAGCAA--------------CCTT-----TTCAGCTAGCTAATCAACTCCATCGTGCAGAGGTTTGAGTGTCCTGTGTCTTGTCAAATTCGCATTCAATCTCTGAACGGTAGAGATGGTGGAGCTATAGATCAGCCTAAATATAT--------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302391:414300-414494 + A--TCT-AAAACCC--AA--------AC--TAGTTGTTTGCTTT------GTGTAG-CTAAAATTG---------AATTCGACA-----TTTGGCCAGCTAATCAACTCCATCGTGCAGAGGTTTGAGTGTCTTGTGTATTGCCAAA-TCGCATTCAACCTCTGAACGGTAGAGATGGTG-AGCTTTAGAGCAACCTAAATTTAT----------------ATGCTAAATTTTAAT-----------------ATTTT---------------------------------------ATAAAG----------------------------------CA
droAna3 scaffold_13337:7606389-7606539 + dan_53 A--TAA-AATA-TT---A--------GT--G--TT-TTTAATTTTCCTGAGGGTG-----------------AAGGA--TGTTT-----TTTGAGAAGCTCATCAGCTCCATCGTGCAGAGGTTTGAGTGTCTAATTTTT-AACCAT-TCGCATTCAACCTTTGGACGGTAGAGATGGTC-AGTGAGAAAGCAACCTA---------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000395543:273531-273687 + T--AAA-AAAG-GA---T--------G------CTTTTTAATTGTGTTGAAGGTGAA-----------------GGC--TGT----TTTTTTGAGAAGCTCATCAGCTCCATCGTGCAGAGGTTTGAGTGTCTA-TTTTTTAACCTT-TCGCATTCAACCTTTGGACGGTAGAGATGGTC-AGTGAAAAAGCAACCTAAAAAA----------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_65:53621-53626 - A--TTC-AA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12758:855563-855700 - dvi_95 A--ATT-AAAG-AC---A--------GG--T--ATGT--------------------------------------AT--GGATC-----TCTCATCAGTTAGCTAGCTCCATCGTGCACAGGTTTGAGTGTT-TGAGTTTTTCCTAG-TGGCATTCAACCTTTGAACGGTAGAGATGGCC-AACTGAAAAGCGACCTAAACTAAT--------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:1909618-1909774 - dmo_71 A--ACA-TAAC-AC---AGGTATGTATC--G--ATTCTTATTTGACTCGAATCTCAG-----------------GTA--TCC----AATAT----GGGTTAGCGAGCTCCATCGTGCACAGGTTTGAGTGTT-TGTGTTT-GGCTAG-TCGCATTCAGCCTTTGAACGGTAGAGATGGCC-AACTGAAAAGCGACCTAA--------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15110:657023-657172 + dgr_27 A--ATT-AAAG-AC---A--------GG--T--TTGTTT----TTCTTGTAGATGAAATGGATTTA---AT----------------------AAAGGTTGGCGAACTCCATCGTGCACGGGTTTGAGTGTC-TGAGT-TTGCCAAG-TGGCATTCAGCCCCTGGACGCTAGAGATGGCC-AACTGAAAAGCAACCTAAAAA-----------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
A--TTA-AATA-AT---A--------AA--A--TTGTTTGATGT------AGGTGGGGTAAAATAG---GTAAAGAA--CTCTT-----TTTGGCCAGCTAATCAACTCCATCGTGCAGAGGTTTGAGTGTCCTGTGTTTTGCCTAA-TCGCATTCAATTTCTGCACGGTAGAGATGGTA-CGCTTAGAAACAACCTAAAGAAATTA----TTACGTATATATG----------T----------------------------ATATAAAACTTAA--------------------AATAT----------------ATGG----TA-----ATATTAASizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
.............................................................................................................CATCGTGCAGAGGTTTGAGTGTC...............................................................................................................................................................................................................231870.0087039550436391005133
.............................................................................................................CATCGTGCAGAGGTTTGAGTGT................................................................................................................................................................................................................221165.001658420410102613115
..............................................................................................................ATCGTGCAGAGGTTTGAGTGTC...............................................................................................................................................................................................................221160.00160291012403000021
.............................................................................................................CATCGTGCAGAGGTTTGAGTG.................................................................................................................................................................................................................21186.008660301322012012
...........................................................................................TGGCCAGCTAATCAACTC......................................................................................................................................................................................................................................18164.00640006400000000
.......................................................................................................................................................CATTCAATTTCTGCACGG..........................................................................................................................................................................18151.00510005001000000
.......................................................................................................................................................CATTCAATTTCTGCACGGTAGA......................................................................................................................................................................22149.004917001400022950
.......................................................................................................................................................CATTCAATTTCTGCACGGTAG.......................................................................................................................................................................21137.003700014010123151
..........................................................................................TTGGCCAGCTAATCAACTC......................................................................................................................................................................................................................................19133.00331003200000000
..............................................................................................................ATCGTGCAGAGGTTTGAGTGT................................................................................................................................................................................................................21127.0027420800024124
...........................................................................................TGGCCAGCTAATCAACTCC.....................................................................................................................................................................................................................................19117.0017800801000000
..............................................................................................................ATCGTGCAGAGGTTTGAGTGTCC..............................................................................................................................................................................................................23114.0014610511000000
.............................................................................................................CATCGTGCAGAGGTTTGAGT..................................................................................................................................................................................................................20113.0013300001041211
.........................................................................................TTTGGCCAGCTAATCAACTC......................................................................................................................................................................................................................................20112.00120001200000000
.............................................................................................................CATCGTGCAGAGGTTTGAG...................................................................................................................................................................................................................19111.0011020620001000
...................................................................................T-----TTTGGCCAGCTAATCAACTC......................................................................................................................................................................................................................................2116.006000600000000
..............................................................................................................ATCGTGCAGAGGTTTGAGTGTCCTG............................................................................................................................................................................................................2516.006200400000000
.............................................................................................................CATCGTGCAGAGGTTTGA....................................................................................................................................................................................................................1816.006000024000000
..........................................................................................TTGGCCAGCTAATCAACTCC.....................................................................................................................................................................................................................................2015.005000500000000
..............................................................................................................ATCGTGCAGAGGTTTGAGT..................................................................................................................................................................................................................1913.003000000000003
..............................................................................................................ATCGTGCAGAGGTTTGAGTGTCCT.............................................................................................................................................................................................................2413.003100200000000
.............................................................................................................CATCGTGCAGAGGTTTGAGTGTCC..............................................................................................................................................................................................................2413.003000101000010
...............................................................................................................TCGTGCAGAGGTTTGAGTGTCCT.............................................................................................................................................................................................................2312.002000200000000
..............................................................................................................ATCGTGCAGAGGTTTGAGTG.................................................................................................................................................................................................................2012.002010001000000
.........................................................................................TTTGGCCAGCTAATCAACTCC.....................................................................................................................................................................................................................................2112.002000200000000
...............................................................................................................TCGTGCAGAGGTTTGAGTGTCC..............................................................................................................................................................................................................2211.001000100000000
........................................................................................................................................................ATTCAATTTCTGCACGGTAGA......................................................................................................................................................................2111.001100000000000
.................................................................................................................GTGCAGAGGTTTGAGTGTC...............................................................................................................................................................................................................1911.001000000000001
.......................................................................................................................................................CATTCAATTTCTGCACGGTA........................................................................................................................................................................2011.001000000000001
.................................................................................................................GTGCAGAGGTTTGAGT..................................................................................................................................................................................................................1611.001000000000001
............................................................................A--CTCTT-----TTTGGCCAGCT...............................................................................................................................................................................................................................................1730.331000000000001
....TA-AATA-AT---A--------AA--A--TTG...............................................................................................................................................................................................................................................................................................................15180.061000000000001
droSec2
A--TTA-AATA-AT---A--------AA--A--TTGTTTGATGT------AGGTGGGGTAAAATAG---GTAATAAA--CACTT-----TTTGGTCAGCTAATCAACTCCATCGTGCAGAGGTTTGAGTGTCCTGTGTTTTGCCTAA-TCGCATTCAATTTCTGCAG---AGAGATGGTA-CGCTTAGAAACAACCTACAAAAATTG----TTACTTATATATG----------C----------------------------ATATAAAACTTGA--------------------AATATA------------------G----TA-----ATTTTAASizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
No Reads
droEre2
A--TGA-AATA-AT---A--------CA--T--TTGTGTGCTAT------AATTGG-GTAAAATAA---GA-AGGAATAC-ACT-----TTTGTCCAGCTAATCAACTCCATCGTGCAGAGGTTTGAGTGTCTTGTGTGTTGCCTAA-TCGCATTCAATTTCTGAACGGTAGAGATGGTA-CGCTTAGAAACAACCTAAAGCAAGTA----TTAATT----------------------------------------------------------------------------------------------------ATGG----TCAAATAATAG-TASizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
.............................................................................................................CATCGTGCAGAGGTTTGAGTGT................................................................................................................................................................................................................221526.0052657181852144012
.............................................................................................................CATCGTGCAGAGGTTTGAGTGTC...............................................................................................................................................................................................................231411.004112281393112100
.............................................................................................................CATCGTGCAGAGGTTTGAGTG.................................................................................................................................................................................................................211293.0029341973151172
.............................................................................................................CATCGTGCAGAGGTTTGAGTGTCT..............................................................................................................................................................................................................24139.00396182013
.............................................................................................................CATCGTGCAGAGGTTTGAGT..................................................................................................................................................................................................................20135.003521151340
.......................................................................................................................................................CATTCAATTTCTGAACGGTAGA......................................................................................................................................................................22114.0014203045
..............................................................................................................ATCGTGCAGAGGTTTGAGTGT................................................................................................................................................................................................................21113.0013007321
..............................................................................................................ATCGTGCAGAGGTTTGAGTGTC...............................................................................................................................................................................................................22110.0010006112
..............................................................................................................ATCGTGCAGAGGTTTGAGTGTCT..............................................................................................................................................................................................................2319.009200304
.............................................................................................................CATCGTGCAGAGGTTTGAG...................................................................................................................................................................................................................1918.008005201
...............................................................................................................TCGTGCAGAGGTTTGAGTGTCT..............................................................................................................................................................................................................2212.002000020
...........................................................................................TGTCCAGCTAATCAACTCC.....................................................................................................................................................................................................................................1911.001000001
..............................................................................................................ATCGTGCAGAGGTTTGAGTG.................................................................................................................................................................................................................2011.001000100
..............................................................................................................ATCGTGCAGAGGTTTGAGTGTCTT.............................................................................................................................................................................................................2411.001000100
..............................................................................................................ATCGTGCAGAGGTTTGAGT..................................................................................................................................................................................................................1911.001100000
droYak3
A--TTA-AATA-TT---A--------CA--G--TTGTTTGCTAT------AGGCGG-GTAAAATAA---GTAAA----------------GTAAACAGCTAATCAACTCCATCGTGCAGAAGTTTGAGTGTCCTGTGTGTTGCCTAA-TCGCATTCAATTTCTGAACGGTAGAGATGGTA-CGCTTAGAAACAACCTAAAATGAGTATATATAAACT----------------------------------------------------------------------------------------------------ATGG----TC-----AAATT--SizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
.............................................................................................................CATCGTGCAGAAGTTTGAGTGTC...............................................................................................................................................................................................................2311520.001520206015468161211
.............................................................................................................CATCGTGCAGAAGTTTGAGTGT................................................................................................................................................................................................................221151.001511683312272134
.......................................................................................................................................................CATTCAATTTCTGAACGGTAGA......................................................................................................................................................................22135.003520000330
..............................................................................................................ATCGTGCAGAAGTTTGAGTGTCC..............................................................................................................................................................................................................23130.003010000029
..............................................................................................................ATCGTGCAGAAGTTTGAGTGTC...............................................................................................................................................................................................................22122.002240001215
.............................................................................................................CATCGTGCAGAAGTTTGAGTGTCC..............................................................................................................................................................................................................24113.001300101011
.............................................................................................................CATCGTGCAGAAGTTTGAGTG.................................................................................................................................................................................................................2119.0091051020
...........................................................................................TAAACAGCTAATCAACTCC.....................................................................................................................................................................................................................................1914.0041000003
............................................................................................................CCATCGTGCAGAAGTTTGAGTGTC...............................................................................................................................................................................................................2413.0030000003
.............................................................................................................CATCGTGCAGAAGTTTGAGT..................................................................................................................................................................................................................2013.0030020010
.................................................................................................................GTGCAGAAGTTTGAGTGTC...............................................................................................................................................................................................................1913.0030000003
...............................................................................................................TCGTGCAGAAGTTTGAGTGTCCTG............................................................................................................................................................................................................2412.0021000001
..............................................................................................................ATCGTGCAGAAGTTTGAGTGTCCT.............................................................................................................................................................................................................2412.0020000002
..........................................................................................GTAAACAGCTAATCAACTC......................................................................................................................................................................................................................................1912.0020000002
........................................................................................................................................................ATTCAATTTCTGAACGGTAGA......................................................................................................................................................................2111.0010000001
.............................................................................................................CATCGTGCAGAAGTTTGAG...................................................................................................................................................................................................................1911.0010000001
............................................................................................................CCATCGTGCAGAAGTTTGAGTGT................................................................................................................................................................................................................2311.0011000000
...........................................................................................TAAACAGCTAATCAACTC......................................................................................................................................................................................................................................1811.0010000001
..............................................................................................................ATCGTGCAGAAGTTTGAGTGTCCTG............................................................................................................................................................................................................2511.0011000000
...............................................................................................................TCGTGCAGAAGTTTGAGTGT................................................................................................................................................................................................................2011.0010000001
droEug1
AAATTA-AATA-CC---T--------AA--A--TTTTTTGG---GATTGTAGTTGGGATA-TTT----------------------TATTTTTGCCAGCTAATCAACTCCATCGTGCAGAGGTTTGAGTGTCCTGTGACTTGCCAAA-TCGCATTCAATCTCTGAACGGTAGAGATGGTC-AGCTTAAAAGCAACCTAAAGACTT----------------AATCAAACTTTAGTTAAGAACATTAATTTATTTACCCAA-----------------------AATTAACACGGATTTTT----AACTATATAGA-CTTCGATTTGA-----AGCCTGASizeHit CountTotal NormTotal
No Reads
droBia1
A--TCA-AAAG-TT---T--------TA--T--ATTTTTGCCTA------AGGTGG-GTAGAATAATAATTACAGGATTTGCTTT-TCGTTTGGTCAGCTCATCAGCTCCATCGTGCAGAGGTTTGAGTGTCCTGTATCTTGCCAAA-TCGCATTCAATCTCTGAACGGTAGAGATGGTC-TGCTTCAAAGCAACATAAAACATTAA----AAACATT---------------------------AA------------------------CTTAT--------------------TTTTAAGTAACT------A-CTTTGTTTCCC-----ATCTTTASizeHit CountTotal NormTotal
No Reads
droTak1
A--TGA-AATG-TT---G--------ATATG--ATCTTTGCGTT-A----AGGTGG-GTAGAATAA---TTACAGGG--TATTTTTTGTTTCGGCCAGCTAATCAACTCCATCGTGCAGAGGTTTGAGTGTCCTGTGTCTCGACAAA-TCGCATTCAATCTCTGAACGGTAGAGATGGTA-TGCTCAAAAGCAACATAAATAAATTC----CTAATT-------------CCTAAA-----------------AATTC-----CTAA-------------AAAAAATTGCAAT---TGCAATGTAAAG------TTAA------------------TGGSizeHit CountTotal NormTotal
No Reads
droEle1
A--ATCAAATC-GT--TA--------AA--T--TTGTTTGACTT------AGGTGG-GTAAAATTATT-GTGGAAGG--TATTT-----GTCGGCCAGCTTTTCAACTCCATCGTGCAGAGGTTTGAGTGTCCTGTGTCTTGCCAAT-TCGCATTCAATCTCTGAACGATAGAGATGGTC-AGCTTAAAAGCAACATAAGATCAAAA----TTACATAAACATA----------AA---------------------------------AACTTGACTAAAATAATTAACA-------------------------------------------GTTGASizeHit CountTotal NormTotal
No Reads
droRho1
A--AAA-CAATTTTGTTA--------AA--G--TTGTTTGATTT------AGATGG-GTAAAATTA---TTATTTAA--AAATT-----TCTGGCTAGCTAATCAACTCCATCGTGCAGAGGTTTGAGTGTCCTGTGTCTTGCCAAT-CCGCATTCAATCTTTGAACGATAGATATGGTC-AGCTTAAATGCAACCTAAACATCT----------------ATTCGAAATTTAGAT-----------------TACCTAAATGACAAAAAATTTAA--------------------GGTTT----------------AAGG-----A-----ATATTAASizeHit CountTotal NormTotal
No Reads
droFic1
A--TCA-AATT-CT--AA--------AG--T--ATTTTTGCT-T------GAGTGG-GTGAAGCAA--------------CCTT-----TTCAGCTAGCTAATCAACTCCATCGTGCAGAGGTTTGAGTGTCCTGTGTCTTGTCAAATTCGCATTCAATCTCTGAACGGTAGAGATGGTGGAGCTATAGATCAGCCTAAATATAT--------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
A--TCT-AAAACCC--AA--------AC--TAGTTGTTTGCTTT------GTGTAG-CTAAAATTG---------AATTCGACA-----TTTGGCCAGCTAATCAACTCCATCGTGCAGAGGTTTGAGTGTCTTGTGTATTGCCAAA-TCGCATTCAACCTCTGAACGGTAGAGATGGTG-AGCTTTAGAGCAACCTAAATTTAT----------------ATGCTAAATTTTAAT-----------------ATTTT---------------------------------------ATAAAG----------------------------------CASizeHit CountTotal NormTotal
No Reads
droAna3
A--TAA-AATA-TT---A--------GT--G--TT-TTTAATTTTCCTGAGGGTG-----------------AAGGA--TGTTT-----TTTGAGAAGCTCATCAGCTCCATCGTGCAGAGGTTTGAGTGTCTAATTTTT-AACCAT-TCGCATTCAACCTTTGGACGGTAGAGATGGTC-AGTGAGAAAGCAACCTA---------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
.............................................................................................................CATCGTGCAGAGGTTTGAGTGTC...............................................................................................................................................................................................................231158.0015821188131385
.............................................................................................................CATCGTGCAGAGGTTTGAGTGT................................................................................................................................................................................................................221149.0014962401931213
.............................................................................................................CATCGTGCAGAGGTTTGAGTGTCT..............................................................................................................................................................................................................24157.0057161326416
.............................................................................................................CATCGTGCAGAGGTTTGAGTG.................................................................................................................................................................................................................21148.004821162243
.......................................................................................................................................................CATTCAACCTTTGGACGGTAGA......................................................................................................................................................................22133.00334111719
.............................................................................................................CATCGTGCAGAGGTTTGAGT..................................................................................................................................................................................................................20112.0012513021
.........................................................................................................................................................TTCAACCTTTGGACGGTAGAG.....................................................................................................................................................................2118.008400031
...............................................................................................................TCGTGCAGAGGTTTGAGTGTCT..............................................................................................................................................................................................................2218.008010070
.......................................................................................................................................................CATTCAACCTTTGGACGGTAG.......................................................................................................................................................................2116.006001041
..............................................................................................................ATCGTGCAGAGGTTTGAGTGTCT..............................................................................................................................................................................................................2313.003030000
............................................................................................................CCATCGTGCAGAGGTTTGAGTGT................................................................................................................................................................................................................2313.003110010
........................................................................................................................................................ATTCAACCTTTGGACGGTAGA......................................................................................................................................................................2112.002000011
..............................................................................................................ATCGTGCAGAGGTTTGAGTG.................................................................................................................................................................................................................2012.002100010
.........................................................................................................................................................TTCAACCTTTGGACGGTAGAGA....................................................................................................................................................................2212.002010001
........................................................................................................................................................ATTCAACCTTTGGACGGTAGAG.....................................................................................................................................................................2211.001000010
..................................................................................TT-----TTTGAGAAGCTCATCAGCTC......................................................................................................................................................................................................................................2211.001000001
.............................................................................................................CATCGTGCAGAGGTTTGAG...................................................................................................................................................................................................................1911.001100000
............................................................................................................CCATCGTGCAGAGGTTTGAGT..................................................................................................................................................................................................................2111.001000001
.........................................................................................................................................................TTCAACCTTTGGACGGTAGA......................................................................................................................................................................2011.001001000
..........................................................................................................................................................TCAACCTTTGGACGGTAGAG.....................................................................................................................................................................2011.001000010
...............................................................................................................TCGTGCAGAGGTTTGAGTGTC...............................................................................................................................................................................................................2111.001000100
..............................................................................................................ATCGTGCAGAGGTTTGAGTGTC...............................................................................................................................................................................................................2211.001000010
.............................................................................................................CATCGTGCAGAGGTTTGAGTGTCTA.............................................................................................................................................................................................................2511.001000100
.....................................................................................................................................................CGCATTCAACCTTTGGACGGTAG.......................................................................................................................................................................2311.001000100
droBip1
T--AAA-AAAG-GA---T--------G------CTTTTTAATTGTGTTGAAGGTGAA-----------------GGC--TGT----TTTTTTGAGAAGCTCATCAGCTCCATCGTGCAGAGGTTTGAGTGTCTA-TTTTTTAACCTT-TCGCATTCAACCTTTGGACGGTAGAGATGGTC-AGTGAAAAAGCAACCTAAAAAA----------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droPer2
A--TTC-AA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalV111
Male-body		V042
Embryo		V050
Head		V057
Head		M021
Embryo		M042
Female-body
No Reads
droVir3
A--ATT-AAAG-AC---A--------GG--T--ATGT--------------------------------------AT--GGATC-----TCTCATCAGTTAGCTAGCTCCATCGTGCACAGGTTTGAGTGTT-TGAGTTTTTCCTAG-TGGCATTCAACCTTTGAACGGTAGAGATGGCC-AACTGAAAAGCGACCTAAACTAAT--------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalV116
Male-body		V053
Head		V047
Embryo		M027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis
.............................................................................................................CATCGTGCACAGGTTTGAGTGT................................................................................................................................................................................................................221107.001075513001323201100004132214110210121515802000033
.............................................................................................................CATCGTGCACAGGTTTGAGTGTT-..............................................................................................................................................................................................................23175.0075104410113101000000010032000200000201100000100
.............................................................................................................CATCGTGCACAGGTTTGAGTGTT-T.............................................................................................................................................................................................................24117.00171000011000000000021032102200000100000000000
.......................................................................................................................................................CATTCAACCTTTGAACGGTAGA......................................................................................................................................................................22112.00120110016000000000000010001000000000100000000
.............................................................................................................CATCGTGCACAGGTTTGAGTG.................................................................................................................................................................................................................2116.0061000000000000000010000200000000000100000001
.............................................................................................................CATCGTGCACAGGTTTGAGT..................................................................................................................................................................................................................2015.0050000000000000000010000001100000100100000000
.............................................................................................................CATCGTGCACAGGTTTGAG...................................................................................................................................................................................................................1914.0040000000000001000000000000000001010100000000
............................................................................................................CCATCGTGCACAGGTTTGAGTGT................................................................................................................................................................................................................2312.0020000000000000000002000000000000000000000000
.........................................................................................................................................................TTCAACCTTTGAACGGTAGAG.....................................................................................................................................................................2111.0010000000000000000000000000000000010000000000
.............................................................................................................CATCGTGCACAGGTTTGA....................................................................................................................................................................................................................1811.0010010000000000000000000000000000000000000000
.........................................................................................................................................................TTCAACCTTTGAACGGTAGAGA....................................................................................................................................................................2211.0010000000100000000000000000000000000000000000
.................................................................................................................GTGCACAGGTTTGAGTGT................................................................................................................................................................................................................1811.0010000000000000000000001000000000000000000000
.........................................................................................................................................................TTCAACCTTTGAACGGTAGA......................................................................................................................................................................2011.0010000000000000000000000000000000010000000000
.........................................................................................TCTCATCAGTTAGCTAGCTC......................................................................................................................................................................................................................................2011.0010000001000000000000000000000000000000000000
........................................................................................................................................................ATTCAACCTTTGAACGGTAGA......................................................................................................................................................................2111.0010000000000000000000000001000000000000000000
.......................................................................................................................................................CATTCAACCTTTGAACGGTAG.......................................................................................................................................................................2111.0010000000000000000010000000000000000000000000
droMoj3
A--ACA-TAAC-AC---AGGTATGTATC--G--ATTCTTATTTGACTCGAATCTCAG-----------------GTA--TCC----AATAT----GGGTTAGCGAGCTCCATCGTGCACAGGTTTGAGTGTT-TGTGTTT-GGCTAG-TCGCATTCAGCCTTTGAACGGTAGAGATGGCC-AACTGAAAAGCGACCTAA--------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalV110
Male-body		V056
Head		V049
Head		V041
Embryo		M046
Female-body		M060
Embryo
.............................................................................................................CATCGTGCACAGGTTTGAGTGTT-..............................................................................................................................................................................................................231467.0046722201768259
.......................................................................................................................................................CATTCAGCCTTTGAACGGTAGA......................................................................................................................................................................221128.00128400144106
.............................................................................................................CATCGTGCACAGGTTTGAGTGT................................................................................................................................................................................................................22187.008737125111210
.............................................................................................................CATCGTGCACAGGTTTGAGTGTT-T.............................................................................................................................................................................................................24113.0013631210
......................................................................................AATAT----GGGTTAGCGAGCTC......................................................................................................................................................................................................................................1918.008000107
.............................................................................................................CATCGTGCACAGGTTTGAGTG.................................................................................................................................................................................................................2115.005000131
.............................................................................................................CATCGTGCACAGGTTTGAGT..................................................................................................................................................................................................................2013.003100110
.......................................................................................................................................................CATTCAGCCTTTGAACGGTAG.......................................................................................................................................................................2112.002000011
.................................................................................C----AATAT----GGGTTAGCGAGCTC......................................................................................................................................................................................................................................2012.002000101
........................................................................................................................................................ATTCAGCCTTTGAACGGTAGA......................................................................................................................................................................2111.001000001
............................................................................................................CCATCGTGCACAGGTTTGAGTGTT-..............................................................................................................................................................................................................2411.001000001
.............................................................................................................CATCGTGCACAGGTTTGAG...................................................................................................................................................................................................................1911.001100000
...............................................................................TCC----AATAT----GGGTTAGCGAGCTC......................................................................................................................................................................................................................................2211.001000001
.......................................................................................ATAT----GGGTTAGCGAGCTC......................................................................................................................................................................................................................................1811.001000001
..............................................................................................................ATCGTGCACAGGTTTGAGTGTT-..............................................................................................................................................................................................................2211.001000001
..............................................................................................................ATCGTGCACAGGTTTGAGTGT................................................................................................................................................................................................................2111.001000010
.................................................................................................................GTGCACAGGTTTGAGTGTT-..............................................................................................................................................................................................................1911.001000100
................................................................................CC----AATAT----GGGTTAGCGAGCTC......................................................................................................................................................................................................................................2111.001000001
.............................................................................................................CATCGTGCACAGGTTTGAGTGTT-TGTG..........................................................................................................................................................................................................2711.001000100
droGri2
A--ATT-AAAG-AC---A--------GG--T--TTGTTT----TTCTTGTAGATGAAATGGATTTA---AT----------------------AAAGGTTGGCGAACTCCATCGTGCACGGGTTTGAGTGTC-TGAGT-TTGCCAAG-TGGCATTCAGCCCCTGGACGCTAGAGATGGCC-AACTGAAAAGCAACCTAAAAA-----------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalV109
Male-body		M041
Female-body
.............................................................................................................CATCGTGCACGGGTTTGAGTGT................................................................................................................................................................................................................22161.00614120
.............................................................................................................CATCGTGCACGGGTTTGAGTG.................................................................................................................................................................................................................21155.00554411
.............................................................................................................CATCGTGCACGGGTTTGAGT..................................................................................................................................................................................................................20120.0020164
.............................................................................................................CATCGTGCACGGGTTTGAGTGTC-..............................................................................................................................................................................................................2316.00651
..............................................................................................................ATCGTGCACGGGTTTGAGTG.................................................................................................................................................................................................................2013.00312
..............................................................................................................ATCGTGCACGGGTTTGAGTGT................................................................................................................................................................................................................2112.00202
.............................................................................................................CATCGTGCACGGGTTTGAGTGTC-T.............................................................................................................................................................................................................2412.00211
..............................................................................................................ATCGTGCACGGGTTTGAGTGTC-..............................................................................................................................................................................................................2211.00110
............................................................................................................CCATCGTGCACGGGTTTGAGT..................................................................................................................................................................................................................2111.00101
................................................................................................................CGTGCACGGGTTTGAGTGT................................................................................................................................................................................................................1911.00101
.......................................................................................................................................................CATTCAGCCCCTGGACGCTAGA......................................................................................................................................................................2211.00101

Generated: 12/06/2013 at 02:39 PM