dsi-mir-87

CTTAAATGGTGATTAATTTCGTCCTGGCTGACACTTAAGTCCTTTGGCGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGCTGCCATCATGGCCAACGATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGGATTTTCCAGTCTGGTAAAGTGATGGGGCTTGAAT *******************************************.((((((((((((...((((((((.((.(((((.(((((..((((...))))........))))).))))).))..))))))))...))))))))))..)).*******************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	GSM343915 embryo	SRR553486 Ovary	SRR553485 Ovary	M025 embryo	M023 head	SRR553487 Ovary	SRR553488 Ovary	O002 Head	M053 Female-body	M024 male body	O001 Testis	SRR618934 Ovary
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGA............................................................	24	0	1	15456.00	15456	5937	3374	2732	571	155	1149	1116	133	143	20	28	98
.............................................................................................................TGAGCAAAATTTCAGGTGTGTGA............................................................	23	0	1	3906.00	3906	931	1110	917	201	95	265	301	32	29	10	7	8
............................................................................................................TTGAGCAAAATTTCAGGTGTGTG.............................................................	23	0	1	2130.00	2130	1222	7	5	394	289	1	6	67	76	17	12	34
............................................................TCGCGCCTGTATCTTGCTGAACC.............................................................................................................	23	0	1	1945.00	1945	13	7	7	1527	347	2	4	1	0	37	0	0
............................................................TCGCGCCTGTATCTTGCTGAAC..............................................................................................................	22	0	1	821.00	821	8	82	55	270	307	30	21	0	1	47	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGT..............................................................	22	0	1	587.00	587	76	3	3	17	268	3	1	105	49	30	20	12
.............................................................................................................TGAGCAAAATTTCAGGTGTGTG.............................................................	22	0	1	351.00	351	92	2	3	63	146	5	7	6	16	8	2	1
............................................................................................................TTGAGCAAAATTTCAGGTG.................................................................	19	0	1	302.00	302	0	0	0	22	77	0	0	147	0	17	38	1
............................................................................................................TTGAGCAAAATTTCAGGTGTG...............................................................	21	0	1	265.00	265	17	0	0	39	78	0	0	85	7	18	16	5
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGG............................................................	24	1	1	232.00	232	12	0	0	169	43	1	1	0	1	5	0	0
............................................................................................................TTGAGCAAAATTTCAGGT..................................................................	18	0	1	208.00	208	0	0	0	0	0	0	0	174	0	0	32	2
.............................................................................................................TGAGCAAAATTTCAGGTGTGTGAA...........................................................	24	1	1	162.00	162	6	72	36	5	12	16	13	0	2	0	0	0
............................................................TCGCGCCTGTATCTTGCTGA................................................................................................................	20	0	1	115.00	115	0	4	7	7	83	2	3	0	0	9	0	0
.............................................................CGCGCCTGTATCTTGCTGAACC.............................................................................................................	22	0	1	111.00	111	0	2	2	96	11	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGT............................................................	24	1	1	94.00	94	51	0	2	8	20	0	0	0	9	3	0	1
............................................................................................................TTGAGCAAAATTTCAGGTGT................................................................	20	0	1	87.00	87	1	0	0	0	1	0	0	70	1	0	12	2
.............................................................................................................TGAGCAAAATTTCAGGTGTGTGG............................................................	23	1	1	79.00	79	1	0	0	67	8	0	0	0	0	3	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA...........................................................	25	1	1	78.00	78	10	22	10	2	1	18	9	0	6	0	0	0
............................................................TCGCGCCTGTATCTTGCTGAA...............................................................................................................	21	0	1	74.00	74	0	22	17	5	17	9	4	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTGT..............................................................	21	0	1	73.00	73	1	0	1	0	37	0	0	20	4	8	2	0
.............................................................................................................TGAGCAAAATTTCAGGTGTG...............................................................	20	0	1	64.00	64	0	0	0	20	25	0	0	13	1	2	3	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGC..............................................................	22	1	1	61.00	61	0	0	0	1	54	0	0	0	0	6	0	0
.............................................................................................................TGAGCAAAATTTCAGGTG.................................................................	18	0	1	55.00	55	0	0	0	7	6	0	0	35	0	1	6	0
............................................................................................................GTGAGCAAAGTTTCAGGTGTGT..............................................................	22	2	1	52.00	52	0	51	0	0	0	0	1	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGG..............................................................	22	1	1	41.00	41	0	0	0	3	32	0	0	0	0	6	0	0
............................................................................................................TTGAGCAAAATTTCAGGCGTGTGA............................................................	24	1	1	41.00	41	36	1	1	0	1	0	0	0	2	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGGGTGTGA............................................................	24	1	1	40.00	40	14	9	9	1	0	3	4	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGC............................................................	24	1	1	38.00	38	23	2	0	5	5	1	1	0	0	0	0	1
............................................................................................................TTTAGCAAAATTTCAGGTGTGTGA............................................................	24	1	1	28.00	28	2	15	10	0	0	0	1	0	0	0	0	0
............................................................................................................TGGAGCAAAATTTCAGGTGTGTGA............................................................	24	1	1	28.00	28	14	9	5	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT...........................................................	25	1	1	27.00	27	6	0	0	9	10	0	1	0	0	1	0	0
............................................................................................................TTGAGCAAAATTTTAGGTGTGTGA............................................................	24	1	1	26.00	26	6	10	7	1	0	2	0	0	0	0	0	0
............................................................................................................GTGAGCAAAGTTTCAGGTGT................................................................	20	2	1	26.00	26	0	26	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTGTGT............................................................	23	1	1	25.00	25	5	0	0	1	17	0	0	0	0	2	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTGTGAT...........................................................	24	1	1	23.00	23	2	0	0	4	12	1	1	0	0	3	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGT................................................................	19	0	1	23.00	23	0	0	0	0	0	0	0	19	0	0	4	0
............................................................................................................TTGAGCAAAATTTCCGGTGTGTGA............................................................	24	1	1	21.00	21	19	1	0	0	0	0	1	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGTTGTGTGA............................................................	24	1	1	20.00	20	5	3	6	2	0	3	1	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTTA............................................................	24	1	1	19.00	19	17	0	1	0	0	0	0	0	0	0	0	1
..............................................................GCGCCTGTATCTTGCTGAACC.............................................................................................................	21	0	1	18.00	18	0	1	0	14	1	0	0	0	0	2	0	0
............................................................TCGCGCCTGTATCTTGCTGG................................................................................................................	20	1	1	18.00	18	0	0	0	1	16	0	0	0	0	1	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGCGTGA............................................................	24	1	1	17.00	17	14	1	0	0	0	2	0	0	0	0	0	0
............................................................................................................TTGAGCAAACTTTCAGGTGTGTGA............................................................	24	1	1	17.00	17	16	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................GTGAGCAAAATTTCAGGTGTGTGA............................................................	24	1	1	16.00	16	5	5	6	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGAGTGTGA............................................................	24	1	1	16.00	16	8	5	3	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGCGA............................................................	24	1	1	15.00	15	11	1	0	2	0	0	1	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCATGTGTGTGA............................................................	24	1	1	15.00	15	2	6	3	0	0	3	1	0	0	0	0	0
............................................................................................................TTAAGCAAAATTTCAGGTGTGTGA............................................................	24	1	1	14.00	14	10	1	1	0	0	0	2	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCGGGTGTGTGA............................................................	24	1	1	14.00	14	6	4	1	0	0	1	2	0	0	0	0	0
............................................................................................................TTGGGCAAAATTTCAGGTGTGTGA............................................................	24	1	1	13.00	13	10	1	0	0	1	1	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTTTGA............................................................	24	1	1	13.00	13	0	4	4	0	0	2	2	0	1	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTGTGAAA..........................................................	25	1	1	13.00	13	0	2	4	1	3	2	1	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGA..............................................................	22	1	1	13.00	13	0	3	3	2	2	2	0	0	1	0	0	0
.............................................................................................................TTAGCAAAATTTCAGGTGTGTGA............................................................	23	1	1	12.00	12	0	5	6	0	0	1	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGGGTGA............................................................	24	1	1	12.00	12	6	0	4	0	1	1	0	0	0	0	0	0
............................................................................................................ATGAGCAAAATTTCAGGTGTGTGA............................................................	24	1	1	12.00	12	6	4	2	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTT.............................................................	23	1	1	12.00	12	4	3	0	0	4	0	0	0	0	1	0	0
............................................................TCTCGCCTGTATCTTGCTGAACC.............................................................................................................	23	1	1	12.00	12	0	0	0	10	2	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTTTGTGA............................................................	24	1	1	11.00	11	3	2	0	1	0	3	1	0	0	0	0	1
............................................................................................................TTGAGCAAAATTTAAGGTGTGTGA............................................................	24	1	1	11.00	11	10	1	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGGGTGTGA............................................................	23	1	1	11.00	11	4	3	1	0	2	1	0	0	0	0	0	0
............................................................................................................TTGAGCAGAATTTCAGGTGTGTGA............................................................	24	1	1	11.00	11	8	2	1	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCTGGTGTGTGA............................................................	24	1	1	11.00	11	11	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................CTGAGCAAAATTTCAGGTGTGTGA............................................................	24	1	1	11.00	11	7	2	2	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTGG..............................................................	21	1	1	10.00	10	0	0	0	1	8	0	0	0	0	1	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTGC..............................................................	21	1	1	9.00	9	0	0	0	0	8	0	0	0	0	1	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTATGA............................................................	24	1	1	9.00	9	3	3	1	0	0	2	0	0	0	0	0	0
............................................................................................................TTGAGCAAGATTTCAGGTGTGTGA............................................................	24	1	1	9.00	9	6	2	1	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGCGTGTGA............................................................	23	1	1	9.00	9	7	0	0	0	0	0	1	0	1	0	0	0
............................................................TCGCGCCTGTATCTTGCTGAACA.............................................................................................................	23	1	1	9.00	9	0	2	1	2	3	0	0	0	0	1	0	0
............................................................................................................TCGAGCAAAATTTCAGGTGTGTGA............................................................	24	1	1	9.00	9	4	0	1	0	0	2	1	0	1	0	0	0
............................................................................................................TTGAGCAAAATTTCAGG...................................................................	17	0	1	8.00	8	0	1	0	0	0	0	1	0	0	0	0	6
............................................................................................................TTGAGCAAAGTTTCAGGTGTGTGA............................................................	24	1	1	8.00	8	2	3	1	0	0	2	0	0	0	0	0	0
............................................................................................................TTGAGAAAAATTTCAGGTGTGTGA............................................................	24	1	1	8.00	8	7	0	1	0	0	0	0	0	0	0	0	0
............................................................TCTCGCCTGTATCTTGCTGAAC..............................................................................................................	22	1	1	8.00	8	0	0	0	1	7	0	0	0	0	0	0	0
............................................................................................................TTGAGCACAATTTCAGGTGTGTGA............................................................	24	1	1	8.00	8	8	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTGTGC............................................................	23	1	1	8.00	8	4	0	0	0	4	0	0	0	0	0	0	0
..................................................................................CGCTGCCATCATGGCCAACGATCCGGT...................................................................................	27	0	1	8.00	8	0	0	0	4	2	0	0	0	1	1	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTGTGAG...........................................................	24	0	1	8.00	8	3	4	0	0	0	0	1	0	0	0	0	0
............................................................................................................TTGACCAAAATTTCAGGTGTGTGA............................................................	24	1	1	7.00	7	1	1	0	0	0	2	1	0	2	0	0	0
............................................................TCGCTCCTGTATCTTGCTGAACC.............................................................................................................	23	1	1	7.00	7	0	0	0	6	1	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAAGTTCAGGTGTGTGA............................................................	24	1	1	7.00	7	1	2	3	0	0	0	0	0	0	1	0	0
..............................................................................................................GAGCAAAATTTCAGGTGTGTGA............................................................	22	0	1	7.00	7	6	0	0	0	0	0	0	0	1	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTGTGAGT..........................................................	25	1	1	7.00	7	1	0	0	5	0	0	1	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAAGTGTGTGA............................................................	24	1	1	7.00	7	2	2	1	1	0	1	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCACGTGTGTGA............................................................	24	1	1	7.00	7	2	2	0	0	0	2	1	0	0	0	0	0
............................................................................................................TTGAGTAAAATTTCAGGTGTGTGA............................................................	24	1	1	7.00	7	3	2	1	0	0	1	0	0	0	0	0	0
............................................................TCGCGCCTGCATCTTGCTGAACC.............................................................................................................	23	1	1	7.00	7	0	0	0	7	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC...........................................................	25	1	1	6.00	6	0	0	0	2	4	0	0	0	0	0	0	0
............................................................................................................TTGAGCAACATTTCAGGTGTGTGA............................................................	24	1	1	6.00	6	6	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATGTCAGGTGTGTGA............................................................	24	1	1	6.00	6	4	0	1	0	0	1	0	0	0	0	0	0
...........................................................................................................CTTGAGCAAAATTTCAGGTGTGTGA............................................................	25	1	1	6.00	6	5	1	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGAAAAATTTCAGGTGTGTG.............................................................	23	1	1	6.00	6	6	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCGAAATTTCAGGTGTGTGA............................................................	24	1	1	6.00	6	5	0	0	0	0	1	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTAA............................................................	24	1	1	6.00	6	1	1	4	0	0	0	0	0	0	0	0	0
............................................................................................................GTGAGCAAAGTTTCAGGTGTGA..............................................................	22	3	2	6.00	12	0	12	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTGA..............................................................	21	1	1	6.00	6	1	2	2	0	1	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGCGTGTG.............................................................	23	1	1	6.00	6	5	0	0	0	0	0	0	0	1	0	0	0
............................................................................................................TTGAACAAAATTTCAGGTGTGTGA............................................................	24	1	1	6.00	6	6	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGCGTGA............................................................	23	1	1	6.00	6	5	0	0	0	0	0	1	0	0	0	0	0
............................................................TCGCGCCTGTATCTTGCTGAAA..............................................................................................................	22	1	1	6.00	6	0	0	0	0	5	0	0	0	0	1	0	0
...................................................................................GCTGCCATCATGGCCAACGATCCGG....................................................................................	25	0	1	6.00	6	2	0	1	3	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTGTTA............................................................	23	1	1	6.00	6	5	0	0	0	0	0	1	0	0	0	0	0
............................................................TCGCGCCTGGATCTTGCTGAACC.............................................................................................................	23	1	1	6.00	6	0	0	0	5	1	0	0	0	0	0	0	0
.............................................................................................................TGAGAAAAATTTCAGGTGTGTGA............................................................	23	1	1	6.00	6	6	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGAGTGTGA............................................................	23	1	1	5.00	5	3	1	1	0	0	0	0	0	0	0	0	0
............................................................TCGCGCCTGTATCTTGCTGAACT.............................................................................................................	23	1	1	5.00	5	0	0	0	2	3	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTGTGAAT..........................................................	25	2	1	5.00	5	0	0	0	3	2	0	0	0	0	0	0	0
............................................................TCGCGCCCGTATCTTGCTGAACC.............................................................................................................	23	1	1	5.00	5	0	0	0	4	1	0	0	0	0	0	0	0
.............................................................................................................GGAGCAAAATTTCAGGTGTGTGA............................................................	23	1	1	5.00	5	0	3	2	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTTAGGTGTGTGA............................................................	23	1	1	5.00	5	0	2	0	0	1	0	2	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTGTGAC...........................................................	24	1	1	5.00	5	1	0	0	3	0	1	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGTTGTGTGA............................................................	23	1	1	5.00	5	0	1	0	3	1	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATCTCAGGTGTGTGA............................................................	24	1	1	5.00	5	3	0	2	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGGGT..............................................................	22	1	1	5.00	5	2	0	0	0	1	0	0	0	1	1	0	0
............................................................................................................TTGAGCAAAATTTCAGGGGTGTG.............................................................	23	1	1	5.00	5	2	0	0	3	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCATGTGTGTGA............................................................	23	1	1	5.00	5	4	0	0	0	0	1	0	0	0	0	0	0
............................................................................................................TAGAGCAAAATTTCAGGTGTGTGA............................................................	24	1	1	4.00	4	3	1	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTCAGCAAAATTTCAGGTGTGTGA............................................................	24	1	1	4.00	4	3	1	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCGTGTGTGTGA............................................................	23	2	1	4.00	4	0	0	0	0	0	3	1	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTCTGA............................................................	24	1	1	4.00	4	2	0	0	0	0	1	1	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCGTGTGTGTGA............................................................	24	2	1	4.00	4	0	1	1	0	0	1	1	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG...........................................................	25	0	1	4.00	4	3	0	0	0	0	0	0	1	0	0	0	0
............................................................TCCCGCCTGTATCTTGCTGAAC..............................................................................................................	22	1	1	4.00	4	0	0	0	2	2	0	0	0	0	0	0	0
.............................................................................................................TGAACAAAATTTCAGGTGTGTGA............................................................	23	1	1	4.00	4	1	1	1	0	1	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGGGTGT..............................................................	22	1	1	4.00	4	0	0	0	1	3	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGATGTGTGA............................................................	24	1	1	4.00	4	1	1	0	0	0	0	1	0	1	0	0	0
............................................................................................................TTGAGCAAAATTCCAGGTGTGTGA............................................................	24	1	1	4.00	4	4	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTTAGGTGTGTG.............................................................	23	1	1	4.00	4	3	0	0	0	0	1	0	0	0	0	0	0
.............................................................................................................TGATCAAAATTTCAGGTGTGTGA............................................................	23	1	1	4.00	4	0	2	2	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTTGA.............................................................	23	3	1	4.00	4	0	2	1	0	0	0	1	0	0	0	0	0
............................................................TCGCGCCTTTATCTTGCTGAACC.............................................................................................................	23	1	1	4.00	4	0	0	0	0	4	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTTTGA............................................................	23	1	1	4.00	4	1	0	1	0	0	0	2	0	0	0	0	0
.............................................................................................................TGAGTAAAATTTCAGGTGTGTGA............................................................	23	1	1	4.00	4	1	1	1	0	0	0	1	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGCTGTGTGA............................................................	24	1	1	3.00	3	2	0	0	0	0	0	1	0	0	0	0	0
............................................................................................................TGGAGCAAAATTTCAGGTGTGTG.............................................................	23	1	1	3.00	3	3	0	0	0	0	0	0	0	0	0	0	0
...................................................................................GCTGCCATCATGGCCAACGATCCG.....................................................................................	24	0	1	3.00	3	0	0	1	2	0	0	0	0	0	0	0	0
............................................................................................................TGGAGCAAAATTTCAGGTGTGTGT............................................................	24	2	1	3.00	3	3	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGGG.............................................................	23	1	1	3.00	3	0	0	0	3	0	0	0	0	0	0	0	0
.............................................................................................................TGAGAAAAATTGCAGGGGTGTGA............................................................	23	3	1	3.00	3	3	0	0	0	0	0	0	0	0	0	0	0
..............................................................TCGCCTGTATCTTGCTGAAC..............................................................................................................	20	1	1	3.00	3	0	0	0	1	2	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGATGTGTG.............................................................	23	1	1	3.00	3	3	0	0	0	0	0	0	0	0	0	0	0
............................................................TCGCGCCTGTACCTTGCTGAAC..............................................................................................................	22	1	1	3.00	3	0	0	1	0	2	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGCG.............................................................	23	1	1	3.00	3	2	0	0	0	0	1	0	0	0	0	0	0
............................................................................................................TTGAGCAAAAATTCAGGTGTGTGA............................................................	24	1	1	3.00	3	2	1	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTTTGTG.............................................................	23	1	1	3.00	3	0	0	0	0	1	0	0	0	2	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTC.............................................................	23	1	1	3.00	3	1	0	1	0	1	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAAGTTCAGGTGTGTGA............................................................	23	1	1	3.00	3	2	1	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGGG...............................................................	21	1	1	3.00	3	0	0	0	1	1	0	0	0	0	1	0	0
.............................................................................................................AGAGCAAAATTTCAGGTGTGTGA............................................................	23	1	1	3.00	3	0	0	2	0	0	0	1	0	0	0	0	0
............................................................TCGCGCCTGTATCTATCTGAAC..............................................................................................................	22	2	1	3.00	3	0	0	0	2	1	0	0	0	0	0	0	0
.............................................................TCCGCCTGTATCTTGCTGAACC.............................................................................................................	22	2	1	3.00	3	0	0	0	3	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCCAAATTTCAGGTGTGTG.............................................................	23	1	1	3.00	3	2	0	0	0	0	0	0	0	1	0	0	0
............................................................................................................TTGAGTAAAATTTCAGGTGTGTG.............................................................	23	1	1	3.00	3	3	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGCGTG.............................................................	23	1	1	3.00	3	0	0	0	2	0	0	0	0	0	0	0	1
............................................................................................................TTGAGCAAAATTTCAGGTTTG...............................................................	21	1	1	3.00	3	0	0	0	1	1	0	0	0	0	1	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTCA............................................................	24	1	1	3.00	3	3	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGAAAAATTTCAGGCGTGTGA............................................................	24	2	1	3.00	3	3	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTA.............................................................	23	1	1	3.00	3	1	0	0	0	1	0	0	0	0	0	0	1
.............................................................CGCGCCTGTATCTTGCTGAAC..............................................................................................................	21	0	1	3.00	3	0	0	0	2	1	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAACTTCAGGTGTGTGA............................................................	24	1	1	3.00	3	2	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................TTAGCAAAATTTCAGGTG.................................................................	18	1	1	3.00	3	0	0	0	3	0	0	0	0	0	0	0	0
............................................................ACGCGCCTGTATCTTGCTGAACC.............................................................................................................	23	1	1	3.00	3	0	0	0	1	2	0	0	0	0	0	0	0
.............................................................................................................CGAGCAAAATTTCAGGTGTGTGA............................................................	23	1	1	3.00	3	1	2	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTGAGGTGTGTGA............................................................	24	1	1	3.00	3	2	0	0	0	0	1	0	0	0	0	0	0
.............................................................................................................TGAGCGAAATTTCAGGTGTGTGA............................................................	23	1	1	3.00	3	1	0	2	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGAGTGTG.............................................................	23	1	1	3.00	3	2	0	0	1	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAATTTTCAGGTGTGTGA............................................................	24	1	1	3.00	3	2	1	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGGGA............................................................	24	1	1	3.00	3	2	0	1	0	0	0	0	0	0	0	0	0
............................................................TCGCGCCTGTATCTTGCTGAACCG............................................................................................................	24	0	1	3.00	3	0	0	0	2	0	0	0	0	0	1	0	0
............................................................................................................TTGAGCAACATTTCAGGTGTGTG.............................................................	23	1	1	2.00	2	1	0	0	0	0	0	0	0	1	0	0	0
............................................................................................................TTTAGCAAAATTTCAGGTGTGTG.............................................................	23	1	1	2.00	2	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAGATTTCAGGTGTGTGA............................................................	23	1	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGGGCAAAATTTCAGGTG.................................................................	19	1	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCCGGTGTGTG.............................................................	22	1	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TGGAGCAAAATTTCAGGTGGGTGA............................................................	24	2	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
............................................................TCGCACCTGTATCTTGCTGAACC.............................................................................................................	23	1	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAATATTTCAGGTGTGTGA............................................................	24	1	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TGGAGCAAAATGTCAGGTGTGTGT............................................................	24	3	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAACAAAATTTCAGGTGTGTG.............................................................	23	1	1	2.00	2	1	0	0	1	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGATGTG...............................................................	21	1	1	2.00	2	0	0	0	0	2	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTTTG.............................................................	23	1	1	2.00	2	1	0	0	0	0	0	0	0	1	0	0	0
............................................................................................................TTGATCAAAATTTCAGGTGTGTGA............................................................	24	1	1	2.00	2	1	0	0	1	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATCTCAGGTGTGTGA............................................................	23	1	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGGGTGTGC............................................................	24	2	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGGGTGC..............................................................	22	2	1	2.00	2	0	0	0	1	1	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATGGCAGGTGTGTGA............................................................	24	2	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................GTGAGCAAAATTTCAGGGGTGTGA............................................................	24	2	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTGTGAGA..........................................................	25	0	1	2.00	2	0	0	0	0	0	1	0	0	0	0	1	0
............................................................................................................TTGAGCAAAATTTCAGGCGTGTGC............................................................	24	2	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAACATTTCAGGTGTGTGT............................................................	24	2	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTGGG.............................................................	22	1	1	2.00	2	0	0	0	0	2	0	0	0	0	0	0	0
............................................................TTGCGCCTGTATCTTGCTGAAC..............................................................................................................	22	1	1	2.00	2	0	0	0	0	2	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATGTCAGGTGTGTG.............................................................	23	1	1	2.00	2	1	0	0	0	0	0	0	0	1	0	0	0
.............................................................................................................TGGGCAAAATTTCAGGTGTGTGA............................................................	23	1	1	2.00	2	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGGAAAATTTCAGGTGTGTG.............................................................	23	1	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTCTGTGA............................................................	23	1	1	2.00	2	1	1	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGACT..........................................................	26	2	1	2.00	2	0	0	0	1	1	0	0	0	0	0	0	0
............................................................................................................GTGAGCAAAGTTTCAGGTGTG...............................................................	21	2	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAATTGTGTGA............................................................	24	2	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................GCAAAATTTCAGGTGTGTGA............................................................	20	0	1	2.00	2	0	1	0	0	0	0	0	0	1	0	0	0
............................................................................................................TTGAGCATAATTTCAGGTGTGTGA............................................................	24	1	1	2.00	2	1	1	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGG................................................................	20	1	1	2.00	2	0	0	0	0	1	0	0	0	0	1	0	0
............................................................................................................TTGAGCAAAATTTCGGGTGTGTG.............................................................	23	1	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
............................................................TCGCGCCTGTATCTTGCTGAACCT............................................................................................................	24	1	1	2.00	2	0	0	0	1	1	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTAAGGGGTGTGA............................................................	24	2	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTATGTGA............................................................	24	1	1	2.00	2	1	0	0	0	0	0	1	0	0	0	0	0
............................................................TCGCGCTTGTATCTTGCTGAAC..............................................................................................................	22	1	1	2.00	2	0	0	0	0	1	0	1	0	0	0	0	0
..................................................................................................................AAAATTTCAGGTGTGTGA............................................................	18	0	1	2.00	2	1	0	0	0	0	0	0	0	0	0	0	1
............................................................................................................TTGAGCAAAATTTCAGGCTTGTGT............................................................	24	3	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGAT.............................................................	23	2	1	2.00	2	0	0	0	0	2	0	0	0	0	0	0	0
............................................................TCGCGCCTGTATCTTGCTG.................................................................................................................	19	0	1	2.00	2	0	0	0	0	1	0	0	0	1	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTGAGA............................................................	23	1	1	2.00	2	0	0	1	1	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATATCAGGTGTGTGA............................................................	24	1	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGAAAAATTTCAGGGGTGTG.............................................................	23	2	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGCGCGA............................................................	24	2	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTGTA.............................................................	22	1	1	2.00	2	1	0	0	0	1	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGATTT.........................................................	27	3	1	2.00	2	0	0	0	0	2	0	0	0	0	0	0	0
............................................................TCGCGCCTGTATCTTGCCGAACC.............................................................................................................	23	1	1	2.00	2	1	0	0	1	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTCTGTGA............................................................	24	1	1	2.00	2	1	1	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAACTTTCAGGTGTGTG.............................................................	23	1	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATCTCAGGTGTGTG.............................................................	22	1	1	2.00	2	0	0	0	0	2	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCCGGTGTGTG.............................................................	23	1	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTGGGT............................................................	23	2	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
............................................................TCGCGTCTGTATCTTGCTGAAC..............................................................................................................	22	1	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0
.............................................................CTCGCCTGTATCTTGCTGAACC.............................................................................................................	22	1	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGAGA............................................................	24	1	1	2.00	2	0	0	0	1	0	1	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGCGTGT..............................................................	22	1	1	2.00	2	1	0	0	0	1	0	0	0	0	0	0	0
............................................................................................................CTGAGCAAAATTTCAGGTGTGTG.............................................................	23	1	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTGCGA............................................................	23	1	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
............................................................TCGCGCCTGTATCTTGTTGAACC.............................................................................................................	23	1	1	2.00	2	0	0	0	1	1	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTGGGA............................................................	23	1	1	2.00	2	1	0	0	1	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAACTTTCAGGTGTGTGA............................................................	23	1	1	2.00	2	1	1	0	0	0	0	0	0	0	0	0	0
.................................................................................................................CAAAATTTCAGGTGTGTGA............................................................	19	0	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0	0
............................................................................................................TTGAGTATAATTTCAGGTGTGTGA............................................................	24	2	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCTGGTGTGTGA............................................................	23	1	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCGAAATTTCAGGTGTGTG.............................................................	23	1	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGAGTGA............................................................	24	1	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTGCAGGTGTGTGA............................................................	24	1	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTTT..............................................................	22	1	1	2.00	2	0	0	0	0	0	0	0	0	2	0	0	0
............................................................................................................TCGAGCAAAATTTCAGGTGTGTG.............................................................	23	1	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	2
............................................................................................................TTGAGCAAAATTTCAGGGTTGTGA............................................................	24	2	1	2.00	2	0	1	0	0	0	1	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTTAGGTGTG...............................................................	20	1	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGGGC..............................................................	22	2	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0
............................................................................................................TGGAGCAAAATCTCAGGTGTGTG.............................................................	23	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGTG...........................................................	25	1	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTAAGCAAAATTTCAGGGGTGTGA............................................................	24	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTTTGTCT............................................................	24	3	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAACATTTGAGGTGTGTGA............................................................	24	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCACGTGTGTGT............................................................	24	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................GTGAGCAAAGTTTCAGGTGTGTT.............................................................	23	3	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCACGTGTGTGA............................................................	23	1	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAGAAGTTCAGGTGTGTGA............................................................	24	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAACTTTCAGGCGTGTTA............................................................	24	3	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTAAGCAAAATTTCAAGTGCGTGA............................................................	24	3	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAATATTTCAGGTTGGTGA............................................................	24	3	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCATACTTTCATGTGTGTG.............................................................	23	3	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGAAAAATTTCAGGGGTGTGA............................................................	23	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTTTGTGG............................................................	23	2	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCCGGTCTGTG.............................................................	23	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGGGTG...............................................................	20	1	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATGTCAGGTGGGGG.............................................................	23	3	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTGCAGGTGTGTG.............................................................	23	1	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................AGAGCATAATTTCAGGTGGGTGA............................................................	23	3	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAATTTTCAGGGGTGTGA............................................................	24	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................CTGAACAAAATTTCAGGTGTGTG.............................................................	23	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTGTGGA...........................................................	24	2	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................GTGGGCAGAATTTCAGGTGTGTGA............................................................	24	3	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGCGTGTTA............................................................	24	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
.............................................................CGCGCCTGTATCTTGCTGAA...............................................................................................................	20	0	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0
............................................................GCGCGCCTGTATCTTGCTGAAC..............................................................................................................	22	1	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTGTT.............................................................	22	1	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0
............................................................................................................ATGAGCAAAATGTCAGGTGTGTGA............................................................	24	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCAGGTCTGT..............................................................	22	1	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0
............................................................................................................ATGAGCAGAATGTCAGGTGTGTGA............................................................	24	3	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGGGCAAAATGTCAGCTGTGTGA............................................................	24	3	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCCAAATTTCAGGTGTGTGT............................................................	24	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGGGTG.............................................................	22	1	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTTAGGTGTGTGAG...........................................................	24	1	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAACTTCAGGTGTGTGC............................................................	24	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TAAGCAAAATTTCAGGTCTGTGA............................................................	23	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGCGCAAACTTTCAGGTGTGTG.............................................................	23	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTGAGGTG.................................................................	19	1	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................AAAATTTCAGGTGTGT..............................................................	16	0	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1
............................................................................................................TGGAGCAAATTTTCAGGTGTGTGG............................................................	24	3	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCACGTGTCTC.............................................................	23	3	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................TCTCGCCTGTATCTTGCTGA................................................................................................................	20	1	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0
............................................................................................................TTGTGCAAAATTTCTGGTGTGTGA............................................................	24	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAAGTTCAGGTGTGGGA............................................................	23	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCACACTTTCCGGTGTGTGA............................................................	24	3	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTGTTTGAC...........................................................	24	2	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0
.............................................................................................................TGAGCAAAATTTCAGGTATGTG.............................................................	22	1	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGAGAAAAATTTCAGGTATGTGA............................................................	23	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................GTGAGCAAAATTTCAGGTAGGTGA............................................................	24	3	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCTGGTGTGTTA............................................................	24	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAACTTTCAGGCGTGTGA............................................................	24	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTTCTCGTGTGTGA............................................................	24	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTAAACAAAATTTCAGATGTGTGA............................................................	24	3	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TTGAGCAAAATTGCAGGGGTGTGA............................................................	24	2	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0
.............................................................................................................TGAGCAAAGTTTCAGGTGTGAGC............................................................	23	3	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0
...........................................................TTCGCGCCTGTATCTTGCTGAAC..............................................................................................................	23	0	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0

ATTCAAGCCCCATCACTTTACCAGACTGGAAAATCCTCCGATGAATGCTAAACACATTTCTCACACACCTGAAATTTTGCTCAACCGGATCGTTGGCCATGATGGCAGCGGTTCAGCAAGATACAGGCGCGAATGAAATGTGCCGCCAAAGGACTTAAGTGTCAGCCAGGACGAAATTAATCACCATTTAAG *******************************************.((..((((((((((...((((((((..((.(((((.(((((........((((...))))..))))).))))).)).))))))))...)))))))))))).*******************************************	Read size	# Mismatch	Hit Count	Total Norm	Total
................................................................ACACCTGAAACTTTGCTCACCT..........................................................................................................	22	3	3	0.67	2
....................................................................................CCGGTTCGTTGTTCATGATGG.......................................................................................	21	3	5	0.20	1
.................................................................................................CAGGATGTCAGCGGTTC..............................................................................	17	2	13	0.08	1
.............................................................................................................GGTTCAGGACGATACA...................................................................	16	2	16	0.06	1
......................................................................................................TGGGAGCGGTTCTGCCAGA.......................................................................	19	3	20	0.05	1
...............................................................................................................................................CACCAAAGGACTTAGATGT..............................	19	3	20	0.05	1

Species	Coordinate	ID	Alignment
droSim3	2L:9739816-9740007 -	dsi-mir-87	CTTAAATGGT-GATTAATTTCGTCCTGGCTG----------------------------------A---CA-CTTAAGTCC-T---------T----TGGCGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGC-TGCCATC-ATGGCCAAC-GA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGGATTTTCCAGTCTGGTAAAGTGATGGGGCTT---------GAAT
droSec2	scaffold_3:5397116-5397288 -	dse-mir-87	CTTAAATGGT-GATTCATTTCGTCCTGGCTG----------------------------------A---CA-ACCAAGTCC-T---------T----TGGCGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGC-TGCCATC-ATGGCCAAC-GA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGGATTTATCAGACTGGT----------------------------
dm3	chr2L:9950373-9950563 -	dme-mir-87	T--ACATGGT-GATTCATTTCGTCCTCGTTG----------------------------------A---CA-CCAAAGTCC-T---------T----TGGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGC-TGCCATT-ATGGCCAAC-GA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGAATTTTCCAGTTTGGTAAAGTGAATCGGCTT---------AAAT
droEre2	scaffold_4929:10570501-10570690 -	der-mir-87	CCTACTTGGT-GATTCATTT-GTCCTTGCTG----------------------------------A----A-CACGAGTCC-T---------T----TGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TGCCATT-ATGGCCTAC-GA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTTAGCATTCATCGGACGATTTTCAAGTCTGGTACCGCGATGCGTCTT---------AAGG
droYak3	2L:12640937-12641126 -	dya-mir-87	TCTACTTGGT-GATTCATTT-GTCCTGGTTG----------------------------------T----G-TCCAAGTCC-T---------T----TGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACAATT-ATGGTCTTC-GA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTTAGCATTCATCGGAGGATTTGCAAAGTTGGTAAAGCAATGCGGCTT---------GGGT
droEug1	scf7180000409554:4961876-4962055 +		T-TACTTGGT-GGATTATTT-GTCCTGACTA----------------------------------A----A-TTTAAGTCC-T---------T----TAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCATA-TTGGCCCAA-GA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATCGAAGGATTTCTAA-------A--AGGATAA-GTTT---------GTAG
droBia1	scf7180000301468:52249-52418 -		------TGGT-GACTCATGT-ATCCTTGGTG----------------------------------T---ATCCAAAAATCC-T--------------AGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TGCCACT-TTGGCCTAC-GA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCTTTCATCGAGGGATGACGAAGT----------------TCTT---------ATAG
droTak1	scf7180000415667:562536-562706 +		CT----TGGT-GATTCATTT-ATCCTGAGTG----------------------------------A----A--------CC-TTACTTAAATT----AAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCACT-TTGGCCTTC-GA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAACCATCGAGGGATTTAA------------A-------TCAT---AT----AGGA
droEle1	scf7180000491186:3003956-3004130 -		TCTAAATGTGTGATTCATCT-GGGCT-------------------------------------------------AGCTCC-T---------T----TGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTTACCATA-TTGGCCTTC-GA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATCCAAAAAA---GTGTTCCCGAA--AAAATATGGTTT-----------AA
droRho1	scf7180000779234:243616-243798 +		CTTGGTTGGT-GATTCATCT-GTGCTTAGTG----------------------------------G----A-CTACAGTCC-T---------T----TGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCATA-TTGGCCATC-GA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATCCACGAAA---GTGTTCTGGAA--ACGATATGG--T---------ACAA
droFic1	scf7180000449513:59-239 +		CTTCAGTAGT-GATTCATACAGTTTTTGC-------------------------------------------CAAAACTCC-T---------T----TGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TGCCAATATTGGCCTAC-GA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCAACTGTAAAA---CCGATTTGGCA--GAGATTTTACTT-----------AT
droKik1	scf7180000302677:173617-173804 +		------TGAT-GATTCATAC-ATCCTTTGTG----------------------------------GAATTA-TTATAATCC-T---------TC---GGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCATT-TGGGCCTAC-AA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCAATGGGTTTTTCTTTCG-----------GCGGCTACATATACTTTGGG
droAna3	scaffold_12916:13789760-13789905 -	dan-mir-87	CATAGA-------TTC---------TG--------------------------------------GATTTA-AGTGAATCC-TT-------T-C---AAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCGAT-ATGGCACAG-AA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCAAAAGAT-----------------------------------------
droBip1	scf7180000396535:753813-753948 -		TTTAAGTGAA-GAA----------------------------------------------------------------TCC-TT-------T-C---AAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCAAT-GTGGCACAC-AA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCATCAAATGAT-----------------------------------------
dp5	4_group3:220086-220255 +	dps-mir-87	------TGGA-GATTT---------TCCTTG----------------------------------A---CA-------TCC-TA-------C-CGTGTGCTGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-AGCCATA-ATGGTCTTT-CATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCACTCCATCAGCA-GTC-GGA------ATCGGGATT---------GAAA
droPer2	scaffold_1:1694886-1695056 +	dpe-mir-87	CTT----AGA-GATTT---------TCCTTG----------------------------------A---CA-------TCC-TA-------C-CGTGTGCTGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-AGCCATA-ATGGTCTTT-CATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCACTCCATCAGCA-GTC-GGA------ATCGGGATT---------GAAA
droVir3	scaffold_12723:3996214-3996344 +	dvi-mir-87	AACAG---GA--GTTCATCT-TT-CTG--------------------------------------G---TG----CTATCCCT---------T----GGCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACAATT-GAGACATCTAAA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT------------------------------------------------------------
droMoj3	scaffold_6500:14729859-14729992 -	dmo-mir-87	CT-ATTTGGG-AG--------------------------------------------------------------CTATCC-T---------T----AGCCGGCATCTTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACAATT-GTCACATCCAAA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGTCTCATCAAAG--------------------------------------------
droGri2	scaffold_15252:3661309-3661480 -	dgr-mir-87	TATATTTGGT-ATA-------GTC--G----AATTTGTGTAACTCTCTCTCTCTCACTCTCTGTGG---TG----TTATCC-T---------T----GACCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCATT-GTGACATCCAAA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGCTTCATC------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim3

CTTAAATGGT-GATTAATTTCGTCCTGGCTG----------------------------------A---CA-CTTAAGTCC-T---------T----TGGCGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGC-TGCCATC-ATGGCCAAC-GA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGGATTTTCCAGTCTGGTAAAGTGATGGGGCTT---------GAAT	Size	Hit Count	Total Norm	Total	V044 Embryo	M023 Head	M024 Male-body	M025 Embryo	O001 Testis	O002 Head	M053 Female-body	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA.....................................................................	24	1	15456.00	15456	5937	155	20	571	28	133	143	2732	3374	1149	1116	98
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA.....................................................................	23	1	3906.00	3906	931	95	10	201	7	32	29	917	1110	265	301	8
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG......................................................................	23	1	2130.00	2130	1222	289	17	394	12	67	76	5	7	1	6	34
.................................................................................................................TCGCGCCTGTATCTTGCTGAACC..........................................................................................................................	23	1	1945.00	1945	13	347	37	1527	0	1	0	7	7	2	4	0
.................................................................................................................TCGCGCCTGTATCTTGCTGAAC...........................................................................................................................	22	1	821.00	821	8	307	47	270	0	0	1	55	82	30	21	0
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT.......................................................................	22	1	587.00	587	76	268	30	17	20	105	49	3	3	3	1	12
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG......................................................................	22	1	351.00	351	92	146	8	63	2	6	16	3	2	5	7	1
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTG..........................................................................	19	1	302.00	302	0	77	17	22	38	147	0	0	0	0	0	1
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG........................................................................	21	1	265.00	265	17	78	18	39	16	85	7	0	0	0	0	5
.....................................................................................................................................................................TTGAGCAAAATTTCAGGT...........................................................................	18	1	208.00	208	0	0	0	0	32	174	0	0	0	0	0	2
.................................................................................................................TCGCGCCTGTATCTTGCTGA.............................................................................................................................	20	1	115.00	115	0	83	9	7	0	0	0	7	4	2	3	0
..................................................................................................................CGCGCCTGTATCTTGCTGAACC..........................................................................................................................	22	1	111.00	111	0	11	0	96	0	0	0	2	2	0	0	0
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGT.........................................................................	20	1	87.00	87	1	1	0	0	12	70	1	0	0	0	0	2
.................................................................................................................TCGCGCCTGTATCTTGCTGAA............................................................................................................................	21	1	74.00	74	0	17	0	5	0	0	0	17	22	9	4	0
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT.......................................................................	21	1	73.00	73	1	37	8	0	2	20	4	1	0	0	0	0
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTG........................................................................	20	1	64.00	64	0	25	2	20	3	13	1	0	0	0	0	0
......................................................................................................................................................................TGAGCAAAATTTCAGGTG..........................................................................	18	1	55.00	55	0	6	1	7	6	35	0	0	0	0	0	0
......................................................................................................................................................................TGAGCAAAATTTCAGGTGT.........................................................................	19	1	23.00	23	0	0	0	0	4	19	0	0	0	0	0	0
...................................................................................................................GCGCCTGTATCTTGCTGAACC..........................................................................................................................	21	1	18.00	18	0	1	2	14	0	0	0	0	1	0	0	0
.....................................................................................................................................................................TTGAGCAAAATTTCAGG............................................................................	17	1	8.00	8	0	0	0	0	0	0	0	0	1	0	1	6
.......................................................................................................................................CGC-TGCCATC-ATGGCCAAC-GA-TCCGGT............................................................................................	27	1	8.00	8	0	2	1	4	0	0	1	0	0	0	0	0
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG....................................................................	24	1	8.00	8	3	0	0	0	0	0	0	0	4	0	1	0
.......................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA.....................................................................	22	1	7.00	7	6	0	0	0	0	0	1	0	0	0	0	0
........................................................................................................................................GC-TGCCATC-ATGGCCAAC-GA-TCCGG.............................................................................................	25	1	6.00	6	2	0	0	3	0	0	0	1	0	0	0	0
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG....................................................................	25	1	4.00	4	3	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................GC-TGCCATC-ATGGCCAAC-GA-TCCG..............................................................................................	24	1	3.00	3	0	0	0	2	0	0	0	1	0	0	0	0
..................................................................................................................CGCGCCTGTATCTTGCTGAAC...........................................................................................................................	21	1	3.00	3	0	1	0	2	0	0	0	0	0	0	0	0
.................................................................................................................TCGCGCCTGTATCTTGCTGAACCG.........................................................................................................................	24	1	3.00	3	0	0	1	2	0	0	0	0	0	0	0	0
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAGA...................................................................	25	1	2.00	2	0	0	0	0	1	0	0	0	0	1	0	0
.........................................................................................................................................................................GCAAAATTTCAGGTGTGTGA.....................................................................	20	1	2.00	2	0	0	0	0	0	0	1	0	1	0	0	0
...........................................................................................................................................................................AAAATTTCAGGTGTGTGA.....................................................................	18	1	2.00	2	1	0	0	0	0	0	0	0	0	0	0	1
.................................................................................................................TCGCGCCTGTATCTTGCTG..............................................................................................................................	19	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0	0
..........................................................................................................................................................................CAAAATTTCAGGTGTGTGA.....................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	1	0	1	0
..................................................................................................................CGCGCCTGTATCTTGCTGAA............................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0
...........................................................................................................................................................................AAAATTTCAGGTGTGT.......................................................................	16	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1
................................................................................................................TTCGCGCCTGTATCTTGCTGAAC...........................................................................................................................	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0

droSec2

CTTAAATGGT-GATTCATTTCGTCCTGGCTG----------------------------------A---CA-ACCAAGTCC-T---------T----TGGCGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGC-TGCCATC-ATGGCCAAC-GA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGGATTTATCAGACTGGT----------------------------	Size	Hit Count	Total Norm	Total	V113 Male-body	V114 Embryo	V115 Head	M054 Female-body
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA.....................................................................	24	1	19236.00	19236	4012	12194	2758	272
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG......................................................................	23	1	6199.00	6199	2222	2110	1735	132
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT.......................................................................	22	1	5249.00	5249	2886	258	1938	167
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA.....................................................................	23	1	3346.00	3346	646	1921	707	72
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG......................................................................	22	1	837.00	837	304	174	324	35
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG........................................................................	21	1	731.00	731	352	41	313	25
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT.......................................................................	21	1	260.00	260	113	7	119	21
.................................................................................................................TCGCGCCTGTATCTTGCTGAACC..........................................................................................................................	23	1	186.00	186	2	182	0	2
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGT.........................................................................	20	1	138.00	138	69	6	61	2
.................................................................................................................TCGCGCCTGTATCTTGCTGAAC...........................................................................................................................	22	1	78.00	78	6	60	8	4
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTG........................................................................	20	1	23.00	23	5	2	14	2
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG....................................................................	24	1	22.00	22	1	15	3	3
.......................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA.....................................................................	22	1	19.00	19	5	8	3	3
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG....................................................................	25	1	11.00	11	1	9	1	0
..................................................................................................................CGCGCCTGTATCTTGCTGAACC..........................................................................................................................	22	1	8.00	8	0	8	0	0
.......................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG......................................................................	21	1	6.00	6	2	2	0	2
.......................................................................................................................................CGC-TGCCATC-ATGGCCAAC-GA-TCCGGT............................................................................................	27	1	4.00	4	0	3	1	0
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTG..........................................................................	19	1	4.00	4	0	1	2	1
.................................................................................................................TCGCGCCTGTATCTTGCTGA.............................................................................................................................	20	1	4.00	4	1	0	2	1
.................................................................................................................TCGCGCCTGTATCTTGCTGAA............................................................................................................................	21	1	4.00	4	1	3	0	0
...................................................................................................................GCGCCTGTATCTTGCTGAACC..........................................................................................................................	21	1	3.00	3	0	3	0	0
.......................................................................................................................................................................GAGCAAAATTTCAGGTGTGT.......................................................................	20	1	3.00	3	1	0	1	1
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAGA...................................................................	25	1	2.00	2	0	1	1	0
..................................................................................................................CGCGCCTGTATCTTGCTGAAC...........................................................................................................................	21	1	2.00	2	0	2	0	0
......................................................................................................................................................................TGAGCAAAATTTCAGGTGT.........................................................................	19	1	2.00	2	1	0	0	1
.................................................................................................................TCGCGCCTGTATCTTGCTGAACCG.........................................................................................................................	24	1	2.00	2	0	2	0	0
........................................................................................................................................................................AGCAAAATTTCAGGTGTGTGA.....................................................................	21	1	1.00	1	0	0	1	0

droEre2

CCTACTTGGT-GATTCATTT-GTCCTTGCTG----------------------------------A----A-CACGAGTCC-T---------T----TGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TGCCATT-ATGGCCTAC-GA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTTAGCATTCATCGGACGATTTTCAAGTCTGGTACCGCGATGCGTCTT---------AAGG	Size	Hit Count	Total Norm	Total	V040 Embryo	V060 Head	V107 Male-body	V108 Head	M055 Female-body	M057 Embryo
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA.....................................................................	24	1	21537.00	21537	3094	346	7475	9089	834	699
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG......................................................................	23	1	8644.00	8644	694	187	2536	4605	474	148
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT.......................................................................	22	1	4504.00	4504	54	133	1804	2228	249	36
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA.....................................................................	23	1	3470.00	3470	535	61	1382	1235	171	86
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG........................................................................	21	1	1208.00	1208	25	42	334	722	62	23
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG......................................................................	22	1	897.00	897	60	28	262	458	74	15
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT.......................................................................	21	1	188.00	188	1	3	87	74	23	0
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGT.........................................................................	20	1	118.00	118	0	1	40	76	1	0
.................................................................................................................TCGCGCCTGTATCTTGCTGAACC..........................................................................................................................	23	1	100.00	100	8	1	2	21	12	56
.................................................................................................................TCGCGCCTGTATCTTGCTGAAC...........................................................................................................................	22	1	71.00	71	5	1	3	25	16	21
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTG........................................................................	20	1	43.00	43	0	0	11	21	7	4
.......................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA.....................................................................	22	1	24.00	24	2	0	8	6	8	0
.................................................................................................................TCGCGCCTGTATCTTGCTGA.............................................................................................................................	20	1	16.00	16	0	2	2	9	3	0
.......................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG......................................................................	21	1	9.00	9	0	1	0	3	5	0
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTG..........................................................................	19	1	8.00	8	0	0	1	6	1	0
.................................................................................................................TCGCGCCTGTATCTTGCTGAA............................................................................................................................	21	1	7.00	7	0	1	2	2	2	0
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG....................................................................	25	1	6.00	6	0	0	3	2	1	0
........................................................................................................................................................................AGCAAAATTTCAGGTGTGTGA.....................................................................	21	1	4.00	4	2	0	0	0	2	0
...........................................................................................................................................................................AAAATTTCAGGTGTGTGA.....................................................................	18	1	4.00	4	0	0	0	2	0	2
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG....................................................................	24	1	4.00	4	0	0	1	0	0	3
.......................................................................................................................................................................GAGCAAAATTTCAGGTGTGT.......................................................................	20	1	3.00	3	0	0	1	2	0	0
......................................................................................................................................................................TGAGCAAAATTTCAGGTGT.........................................................................	19	1	3.00	3	0	0	1	1	1	0

droYak3

TCTACTTGGT-GATTCATTT-GTCCTGGTTG----------------------------------T----G-TCCAAGTCC-T---------T----TGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACAATT-ATGGTCTTC-GA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTTAGCATTCATCGGAGGATTTGCAAAGTTGGTAAAGCAATGCGGCTT---------GGGT	Size	Hit Count	Total Norm	Total	V046 Embryo	V052 Head	V120 Male-body	V058 Head	M026 Head	M043 Female-body	M056 Embryo
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA.....................................................................	24	1	9316.00	9316	2419	159	3398	384	16	429	2511
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG......................................................................	23	1	2672.00	2672	482	69	1254	134	10	257	466
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT.......................................................................	22	1	1141.00	1141	16	58	767	150	5	93	52
.................................................................................................................TCGCGCCTGTATCTTGCTGAACC..........................................................................................................................	23	1	1031.00	1031	10	0	1	0	104	10	906
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA.....................................................................	23	1	1024.00	1024	313	21	247	47	3	91	302
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG........................................................................	21	1	295.00	295	13	5	109	17	6	41	104
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG......................................................................	22	1	198.00	198	37	8	61	18	3	39	32
.................................................................................................................TCGCGCCTGTATCTTGCTGAAC...........................................................................................................................	22	1	180.00	180	2	0	1	0	59	4	114
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT.......................................................................	21	1	46.00	46	1	4	23	5	1	12	0
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGT.........................................................................	20	1	38.00	38	0	3	30	3	0	2	0
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTG..........................................................................	19	1	14.00	14	0	0	1	0	7	0	6
.......................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA.....................................................................	22	1	8.00	8	1	0	1	0	0	5	1
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTG........................................................................	20	1	7.00	7	0	0	0	0	1	0	6
......................................................................................................................................................................TGAGCAAAATTTCAGGTG..........................................................................	18	1	4.00	4	0	0	0	0	3	0	1
..................................................................................................................CGCGCCTGTATCTTGCTGAACC..........................................................................................................................	22	1	4.00	4	0	0	0	0	0	2	2
.......................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG......................................................................	21	1	3.00	3	0	1	0	0	0	2	0
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG....................................................................	25	1	3.00	3	1	0	2	0	0	0	0
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG....................................................................	24	1	3.00	3	1	0	1	0	0	0	1
.........................................................................................................................................................................GCAAAATTTCAGGTGTGTGA.....................................................................	20	1	2.00	2	0	0	0	0	0	1	1
.................................................................................................................TCGCGCCTGTATCTTGCTGA.............................................................................................................................	20	1	2.00	2	0	0	0	0	2	0	0
..........................................................................................................................................................................CAAAATTTCAGGTGTGTGA.....................................................................	19	1	2.00	2	0	0	0	0	0	0	2
......................................................................................................................................................................TGAGCAAAATTTCAGGTGT.........................................................................	19	1	2.00	2	0	0	2	0	0	0	0
.................................................................................................................TCGCGCCTGTATCTTGCTGAACCG.........................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	2
...........................................................................................................................................................................AAAATTTCAGGTGTGTGA.....................................................................	18	1	2.00	2	0	0	0	0	0	1	1

droEug1

T-TACTTGGT-GGATTATTT-GTCCTGACTA----------------------------------A----A-TTTAAGTCC-T---------T----TAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCATA-TTGGCCCAA-GA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATCGAAGGATTTCTAA-------A--AGGATAA-GTTT---------GTAG	Size	Hit Count	Total Norm	Total
No Reads

droBia1

------TGGT-GACTCATGT-ATCCTTGGTG----------------------------------T---ATCCAAAAATCC-T--------------AGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TGCCACT-TTGGCCTAC-GA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCTTTCATCGAGGGATGACGAAGT----------------TCTT---------ATAG	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CT----TGGT-GATTCATTT-ATCCTGAGTG----------------------------------A----A--------CC-TTACTTAAATT----AAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCACT-TTGGCCTTC-GA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAACCATCGAGGGATTTAA------------A-------TCAT---AT----AGGA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TCTAAATGTGTGATTCATCT-GGGCT-------------------------------------------------AGCTCC-T---------T----TGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTTACCATA-TTGGCCTTC-GA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATCCAAAAAA---GTGTTCCCGAA--AAAATATGGTTT-----------AA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CTTGGTTGGT-GATTCATCT-GTGCTTAGTG----------------------------------G----A-CTACAGTCC-T---------T----TGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCATA-TTGGCCATC-GA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATCCACGAAA---GTGTTCTGGAA--ACGATATGG--T---------ACAA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

CTTCAGTAGT-GATTCATACAGTTTTTGC-------------------------------------------CAAAACTCC-T---------T----TGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TGCCAATATTGGCCTAC-GA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCAACTGTAAAA---CCGATTTGGCA--GAGATTTTACTT-----------AT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

------TGAT-GATTCATAC-ATCCTTTGTG----------------------------------GAATTA-TTATAATCC-T---------TC---GGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCATT-TGGGCCTAC-AA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCAATGGGTTTTTCTTTCG-----------GCGGCTACATATACTTTGGG	Size	Hit Count	Total Norm	Total
No Reads

droAna3

CATAGA-------TTC---------TG--------------------------------------GATTTA-AGTGAATCC-TT-------T-C---AAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCGAT-ATGGCACAG-AA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCAAAAGAT-----------------------------------------	Size	Hit Count	Total Norm	Total	V105 Male-body	V106 Head	V055 Head	V039 Embryo	M044 Female-body	M058 Embryo
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA.....................................................................	24	1	7304.00	7304	2367	2992	321	404	700	520
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG......................................................................	23	1	3217.00	3217	1094	1496	123	147	256	101
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT.......................................................................	22	1	2325.00	2325	898	980	186	4	236	21
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA.....................................................................	23	1	757.00	757	126	389	29	48	106	59
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG........................................................................	21	1	584.00	584	170	292	30	4	75	13
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG......................................................................	22	1	302.00	302	56	178	12	14	36	6
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT.......................................................................	21	1	129.00	129	34	71	9	0	15	0
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGT.........................................................................	20	1	124.00	124	39	68	9	3	4	1
.................................................................................................................TCGCGCCTGTATCTTGCTGAACC..........................................................................................................................	23	1	58.00	58	0	1	1	0	29	27
.................................................................................................................TCGCGCCTGTATCTTGCTGAAC...........................................................................................................................	22	1	57.00	57	1	2	4	0	39	11
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTG........................................................................	20	1	25.00	25	4	15	0	0	5	1
.................................................................................................................TCGCGCCTGTATCTTGCTGA.............................................................................................................................	20	1	11.00	11	0	3	0	0	8	0
.................................................................................................................TCGCGCCTGTATCTTGCTGAA............................................................................................................................	21	1	8.00	8	0	1	1	0	6	0
..................................................................................................................CGCGCCTGTATCTTGCTGAACC..........................................................................................................................	22	1	8.00	8	0	1	0	0	6	1
......................................................................................................................................................................TGAGCAAAATTTCAGGTGT.........................................................................	19	1	6.00	6	1	3	1	0	1	0
..................................................................................................................CGCGCCTGTATCTTGCTGAAC...........................................................................................................................	21	1	5.00	5	0	0	0	0	5	0
.......................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA.....................................................................	22	1	5.00	5	0	2	0	1	2	0
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTG..........................................................................	19	1	5.00	5	0	4	0	0	0	1
.......................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG......................................................................	21	1	3.00	3	0	1	0	0	2	0
.........................................................................................................................................................................GCAAAATTTCAGGTGTGTGA.....................................................................	20	1	3.00	3	0	0	1	0	1	1
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG....................................................................	24	1	2.00	2	0	1	1	0	0	0
...........................................................................................................................................................................AAAATTTCAGGTGTGTGA.....................................................................	18	1	2.00	2	0	0	0	0	1	1
.................................................................................................................TCGCGCCTGTATCTTGCTGAACCG.........................................................................................................................	24	1	1.00	1	0	0	0	0	1	0
........................................................................................................................................................................AGCAAAATTTCAGGTGTGTG......................................................................	20	1	1.00	1	0	0	0	0	1	0
....................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGTG......................................................................	24	1	1.00	1	0	0	0	0	1	0
.......................................................................................................................................CGT-TACCGAT-ATGGCACAG-AA-TCCGGT............................................................................................	27	1	1.00	1	0	0	0	0	1	0

droBip1

TTTAAGTGAA-GAA----------------------------------------------------------------TCC-TT-------T-C---AAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCAAT-GTGGCACAC-AA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCATCAAATGAT-----------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

dp5

------TGGA-GATTT---------TCCTTG----------------------------------A---CA-------TCC-TA-------C-CGTGTGCTGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-AGCCATA-ATGGTCTTT-CATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCACTCCATCAGCA-GTC-GGA------ATCGGGATT---------GAAA	Size	Hit Count	Total Norm	Total	V112 Male-body	V043 Embryo	V051 Head	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head
......................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA....................................................................	24	1	9296.00	9296	2413	2998	517	0	1271	2001	96
......................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT......................................................................	22	1	3075.00	3075	1490	140	235	1	926	202	81
......................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG.....................................................................	23	1	2577.00	2577	993	536	213	0	511	258	66
.......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA....................................................................	23	1	1710.00	1710	390	571	93	0	373	264	19
......................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG.......................................................................	21	1	1123.00	1123	498	133	104	2	278	94	14
.......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG.....................................................................	22	1	351.00	351	121	49	30	0	125	20	6
.......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT......................................................................	21	1	221.00	221	79	2	20	1	110	5	4
......................................................................................................................................................................TTGAGCAAAATTTCAGGTGT........................................................................	20	1	181.00	181	127	10	11	0	31	2	0
..................................................................................................................TCGCGCCTGTATCTTGCTGAACC.........................................................................................................................	23	1	73.00	73	0	7	1	0	14	50	1
..................................................................................................................TCGCGCCTGTATCTTGCTGAAC..........................................................................................................................	22	1	53.00	53	5	3	3	1	31	7	3
.......................................................................................................................................................................TGAGCAAAATTTCAGGTGTG.......................................................................	20	1	50.00	50	12	1	4	0	26	6	1
........................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA....................................................................	22	1	23.00	23	2	1	0	0	18	2	0
.......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG...................................................................	24	1	14.00	14	0	4	1	0	5	3	1
......................................................................................................................................................................TTGAGCAAAATTTCAGGTG.........................................................................	19	1	10.00	10	0	0	0	0	6	4	0
........................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG.....................................................................	21	1	9.00	9	0	0	0	0	9	0	0
........................................................................................................................................................................GAGCAAAATTTCAGGTGTGT......................................................................	20	1	8.00	8	2	0	0	0	6	0	0
...................................................................................................................CGCGCCTGTATCTTGCTGAAC..........................................................................................................................	21	1	7.00	7	0	0	0	0	7	0	0
.....................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGTGA....................................................................	25	1	7.00	7	0	2	0	0	3	1	1
......................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG...................................................................	25	1	7.00	7	2	2	0	0	0	2	1
...................................................................................................................CGCGCCTGTATCTTGCTGAACC.........................................................................................................................	22	1	7.00	7	0	0	0	0	1	6	0
.....................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGTG.....................................................................	24	1	6.00	6	1	3	0	0	2	0	0
.......................................................................................................................................................................TGAGCAAAATTTCAGGTGT........................................................................	19	1	6.00	6	1	0	2	0	2	0	1
..................................................................................................................TCGCGCCTGTATCTTGCTGAA...........................................................................................................................	21	1	5.00	5	1	0	0	0	4	0	0
..................................................................................................................TCGCGCCTGTATCTTGCTGA............................................................................................................................	20	1	4.00	4	2	0	0	0	2	0	0
......................................................................................................................................................................TTGAGCAAAATTTCAGGT..........................................................................	18	1	2.00	2	0	0	1	0	1	0	0
...................................................................................................................CGCGCCTGTATCTTGCTGAA...........................................................................................................................	20	1	2.00	2	0	0	0	0	2	0	0
..................................................................................................................TCGCGCCTGTATCTTGCTGAACCG-.......................................................................................................................	24	1	2.00	2	0	0	1	0	1	0	0
.........................................................................................................................................................................AGCAAAATTTCAGGTGTGTGA....................................................................	21	1	2.00	2	0	1	0	0	1	0	0

droPer2

CTT----AGA-GATTT---------TCCTTG----------------------------------A---CA-------TCC-TA-------C-CGTGTGCTGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-AGCCATA-ATGGTCTTT-CATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCACTCCATCAGCA-GTC-GGA------ATCGGGATT---------GAAA	Size	Hit Count	Total Norm	Total	V111 Male-body	V042 Embryo	V050 Head	V057 Head	M021 Embryo	M042 Female-body
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA.....................................................................	24	1	4037.00	4037	2131	566	360	808	18	154
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT.......................................................................	22	1	2186.00	2186	935	40	221	868	8	114
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG......................................................................	23	1	1238.00	1238	632	193	123	220	7	63
.................................................................................................................TCGCGCCTGTATCTTGCTGAACC..........................................................................................................................	23	1	842.00	842	1	4	1	2	832	2
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA.....................................................................	23	1	725.00	725	294	130	53	202	6	40
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG........................................................................	21	1	550.00	550	217	50	68	167	4	44
.................................................................................................................TCGCGCCTGTATCTTGCTGAAC...........................................................................................................................	22	1	190.00	190	0	0	1	3	185	1
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG......................................................................	22	1	180.00	180	73	26	20	46	1	14
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT.......................................................................	21	1	115.00	115	43	1	11	52	0	8
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGT.........................................................................	20	1	113.00	113	35	0	14	58	0	6
..................................................................................................................CGCGCCTGTATCTTGCTGAACC..........................................................................................................................	22	1	77.00	77	0	1	0	0	75	1
.................................................................................................................TCGCGCCTGTATCTTGCTGAACCG.........................................................................................................................	24	1	25.00	25	0	0	0	0	25	0
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTG........................................................................	20	1	13.00	13	5	1	0	3	2	2
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTG..........................................................................	19	1	13.00	13	0	0	1	4	8	0
.................................................................................................................TCGCGCCTGTATCTTGCTGAA............................................................................................................................	21	1	11.00	11	0	0	1	0	8	2
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG....................................................................	24	1	9.00	9	6	1	0	1	0	1
....................................................................................................................CGCCTGTATCTTGCTGAACC..........................................................................................................................	20	1	5.00	5	0	0	0	0	5	0
.......................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA.....................................................................	22	1	5.00	5	0	2	0	0	0	3
.....................................................................................................................GCCTGTATCTTGCTGAACC..........................................................................................................................	19	1	4.00	4	0	0	0	0	4	0
.................................................................................................................TCGCGCCTGTATCTTGCTGA.............................................................................................................................	20	1	4.00	4	0	0	0	1	3	0
.....................................................................................................................................................................TTGAGCAAAATTTCAGGT...........................................................................	18	1	3.00	3	0	0	2	1	0	0
..................................................................................................................CGCGCCTGTATCTTGCTGAAC...........................................................................................................................	21	1	2.00	2	0	0	0	0	0	2
....................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGT.......................................................................	23	1	2.00	2	2	0	0	0	0	0
......................................................................................................................................................................TGAGCAAAATTTCAGGTG..........................................................................	18	1	2.00	2	0	0	0	0	2	0
...................................................................................................................GCGCCTGTATCTTGCTGAAC...........................................................................................................................	20	1	1.00	1	0	0	0	0	1	0
.........................................................................................................................................................................GCAAAATTTCAGGTGTGT.......................................................................	18	1	1.00	1	0	0	0	1	0	0
...........................................................................................................................................................................AAAATTTCAGGTGTGTGA.....................................................................	18	1	1.00	1	0	1	0	0	0	0
................................................................................................................TTCGCGCCTGTATCTTGCTGAACC..........................................................................................................................	24	1	1.00	1	0	0	0	0	1	0

droVir3

AACAG---GA--GTTCATCT-TT-CTG--------------------------------------G---TG----CTATCCCT---------T----GGCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACAATT-GAGACATCTAAA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT------------------------------------------------------------	Size	Hit Count	Total Norm	Total	V116 Male-body	V053 Head	V047 Embryo	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis
......................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA....................................................................	24	1	10900.00	10900	3147	524	2563	2	6	272	627	6	17	1	2	1	5	0	0	0	0	803	366	170	522	267	396	5	323	689	9	1	1	6	8	36	20	10	44	0	9	0	0	0	4	10	28
......................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT......................................................................	22	1	6131.00	6131	2379	659	137	4	33	330	54	5	14	6	0	0	4	0	0	0	0	334	228	163	378	313	199	4	271	475	5	4	1	2	11	20	12	10	33	0	5	0	0	0	1	4	33
......................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG.....................................................................	23	1	5159.00	5159	1592	281	749	6	13	168	170	2	13	4	2	0	0	0	0	0	0	415	207	73	307	211	180	6	207	438	4	5	1	3	2	20	8	8	22	0	9	0	0	0	0	7	26
.......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA....................................................................	23	1	1713.00	1713	274	77	439	2	4	57	79	1	3	0	0	0	0	0	0	0	0	152	69	32	127	57	68	0	62	178	1	2	0	2	0	7	1	5	6	0	1	0	0	0	2	0	5
......................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG.......................................................................	21	1	702.00	702	268	66	29	2	11	49	30	0	1	1	1	0	0	0	0	0	0	23	23	15	41	36	22	1	27	30	3	2	3	1	0	3	1	1	5	0	3	0	0	0	0	0	4
.......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG.....................................................................	22	1	555.00	555	100	28	57	0	4	35	8	0	2	0	0	0	0	0	0	0	0	54	35	20	33	36	20	2	42	62	0	0	0	2	0	2	5	1	3	0	3	0	0	0	0	1	0
.......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT......................................................................	21	1	341.00	341	70	42	4	1	2	53	1	0	1	0	0	0	0	0	0	0	0	16	11	17	24	24	9	1	22	29	0	1	0	1	0	1	3	2	4	0	1	0	0	0	0	0	1
..................................................................................................................TCGCGCCTGTATCTTGCTGAACC.........................................................................................................................	23	1	206.00	206	1	0	1	47	103	2	48	0	0	0	0	0	0	0	0	0	0	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................TTGAGCAAAATTTCAGGTGT........................................................................	20	1	106.00	106	60	13	0	0	0	5	0	0	1	0	0	0	0	0	0	0	0	3	1	1	4	4	1	0	6	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................TCGCGCCTGTATCTTGCTGAAC..........................................................................................................................	22	1	73.00	73	1	0	1	10	42	2	6	0	0	0	0	0	0	0	0	0	0	1	1	1	1	1	3	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................TCGCGCCTGTATCTTGCTGA............................................................................................................................	20	1	26.00	26	0	0	0	8	16	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................TGAGCAAAATTTCAGGTGTG.......................................................................	20	1	14.00	14	0	0	0	2	1	3	5	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................TTGAGCAAAATTTCAGGTG.........................................................................	19	1	13.00	13	0	0	0	2	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA....................................................................	22	1	11.00	11	3	1	3	0	0	2	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................TCGCGCCTGTATCTTGCTGAA...........................................................................................................................	21	1	8.00	8	1	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG.....................................................................	21	1	6.00	6	1	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................TTGAGCAAAATTTCAGGT..........................................................................	18	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................AAAATTTCAGGTGTGTGA....................................................................	18	1	4.00	4	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................CGCGCCTGTATCTTGCTGAACC.........................................................................................................................	22	1	3.00	3	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG...................................................................	25	1	3.00	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTG.......................................................................	22	1	3.00	3	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................CAAAATTTCAGGTGTGTGA....................................................................	19	1	2.00	2	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

CT-ATTTGGG-AG--------------------------------------------------------------CTATCC-T---------T----AGCCGGCATCTTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACAATT-GTCACATCCAAA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGTCTCATCAAAG--------------------------------------------	Size	Hit Count	Total Norm	Total	V110 Male-body	V056 Head	V049 Head	V041 Embryo	M046 Female-body	M060 Embryo
......................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA....................................................................	24	1	8070.00	8070	2048	254	144	2221	469	2934
......................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT......................................................................	22	1	3515.00	3515	1774	446	277	85	615	318
......................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG.....................................................................	23	1	1777.00	1777	801	77	66	290	207	336
.......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA....................................................................	23	1	1079.00	1079	239	51	31	299	129	330
......................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG.......................................................................	21	1	548.00	548	204	41	28	25	77	173
..................................................................................................................TCGCGCCTGTATCTTGCTGAACC.........................................................................................................................	23	1	415.00	415	1	2	0	21	0	391
.......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT......................................................................	21	1	217.00	217	81	32	14	4	79	7
.......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG.....................................................................	22	1	202.00	202	68	20	11	23	52	28
......................................................................................................................................................................TTGAGCAAAATTTCAGGTGT........................................................................	20	1	104.00	104	64	14	12	3	11	0
..................................................................................................................TCGCGCCTGTATCTTGCTGAAC..........................................................................................................................	22	1	89.00	89	1	3	0	5	3	77
.......................................................................................................................................................................TGAGCAAAATTTCAGGTGTG.......................................................................	20	1	25.00	25	2	1	3	0	3	16
............................................................................................................................................................................AAAATTTCAGGTGTGTGA....................................................................	18	1	11.00	11	0	0	0	1	1	9
........................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA....................................................................	22	1	10.00	10	1	0	0	0	5	4
........................................................................................................................................................................GAGCAAAATTTCAGGTGTGT......................................................................	20	1	7.00	7	0	0	0	0	6	1
......................................................................................................................................................................TTGAGCAAAATTTCAGGTG.........................................................................	19	1	7.00	7	0	0	1	0	1	5
..................................................................................................................TCGCGCCTGTATCTTGCTGA............................................................................................................................	20	1	5.00	5	0	2	1	0	0	2
.......................................................................................................................................................................TGAGCAAAATTTCAGGTGT........................................................................	19	1	3.00	3	0	0	1	1	1	0
..................................................................................................................TCGCGCCTGTATCTTGCTGAA...........................................................................................................................	21	1	3.00	3	0	1	0	1	0	1
........................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG.....................................................................	21	1	2.00	2	1	0	0	0	1	0
..........................................................................................................................................................................GCAAAATTTCAGGTGTGTGA....................................................................	20	1	2.00	2	0	0	0	0	0	2
.........................................................................................................................................G-TTACAAT-TGTCACATCCAA-ATCCGG............................................................................................	26	1	2.00	2	0	0	0	0	0	2
....................................................................................................................GCGCCTGTATCTTGCTGAACC.........................................................................................................................	21	1	2.00	2	0	0	0	1	0	1
...................................................................................................................CGCGCCTGTATCTTGCTGAACC.........................................................................................................................	22	1	2.00	2	0	0	0	0	0	2
........................................................................................................................................................................GAGCAAAATTTCAGGTGTG.......................................................................	19	1	2.00	2	0	0	0	0	2	0
.......................................................................................................................................................................TGAGCAAAATTTCAGGTG.........................................................................	18	1	2.00	2	1	0	0	0	0	1
.....................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGTGA....................................................................	25	1	2.00	2	0	0	0	0	1	1

droGri2

TATATTTGGT-ATA-------GTC--G----AATTTGTGTAACTCTCTCTCTCTCACTCTCTGTGG---TG----TTATCC-T---------T----GACCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCATT-GTGACATCCAAA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGCTTCATC------------------------------------------------	Size	Hit Count	Total Norm	Total	V109 Male-body	M041 Female-body
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA.....................................................................	24	1	605.00	605	470	135
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT.......................................................................	22	1	329.00	329	230	99
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG......................................................................	23	1	190.00	190	144	46
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA.....................................................................	23	1	66.00	66	42	24
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG........................................................................	21	1	60.00	60	45	15
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT.......................................................................	21	1	22.00	22	7	15
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG......................................................................	22	1	16.00	16	6	10
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTGT.........................................................................	20	1	3.00	3	3	0
...........................................................................................................................................................................AAAATTTCAGGTGTGTGA.....................................................................	18	1	2.00	2	0	2
.......................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA.....................................................................	22	1	2.00	2	0	2
.......................................................................................................................................................................GAGCAAAATTTCAGGTGTGT.......................................................................	20	1	2.00	2	0	2
.................................................................................................................TCGCGCCTGTATCTTGCTGAAC...........................................................................................................................	22	1	2.00	2	1	1
......................................................................................................................................................................TGAGCAAAATTTCAGGTGTG........................................................................	20	1	1.00	1	0	1
......................................................................................................................................................................TGAGCAAAATTTCAGGTGT.........................................................................	19	1	1.00	1	0	1
.....................................................................................................................................................................TTGAGCAAAATTTCAGGTG..........................................................................	19	1	1.00	1	1	0
....................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGT.......................................................................	23	1	1.00	1	0	1

dsi-mir-87

2L:9739866-9739957 -

Known

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-42.6	-42.5	-42.4