ID:

dsi-mir-308

 Coordinate:

2R:8866671-8866733 -

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.6 -30.6 -30.4

Flybase annnotation

intron [Dsim\GD25696-in]; pre_miRNA [Dsim\mir-308-RM]; miRNA [Dsim\miR-308-RA]

No Repeatable elements found

Sense Strand Reads

CCCTAACATAGAAGTGGTGGGATGGTGGGGGGAATCACACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGTTTTGCAACTCAAATCACAGGATTATACTGTGAGATGACCAGCGTGCCAGCAGCAGAAAGCGAATGATATGATATCAATAATAT
*************************************((((.((...((.(((((((((((.(((((((.((((....((...))....)))).))))))).))))))))))).))...))))))..************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR618934
Ovary		 SRR553487
Ovary		 SRR553488
Ovary		 O001
Testis
 M023
head
 O002
Head
 SRR553485
Ovary		 SRR553486
Ovary		 GSM343915
embryo
 M053
Female-body		 M024
male body
 M025
embryo
....................................................CGCAGTATATTTTTGTGTTTTG......................................................................................... 22 0 1 9196.00 9196 3815 589 370 1274 514 862 146 105 732 396 191 202
...........................................................................................AATCACAGGATTATACTGTGA................................................... 21 0 1 6064.00 6064 745 2451 1223 2 83 1 576 582 107 253 5 36
...............................................................................................ACAGGATTATACTGTGAG.................................................. 18 0 1 2799.00 2799 2706 15 71 0 1 1 0 0 0 5 0 0
...........................................................................................AATCACAGGATTATACTGT..................................................... 19 0 1 2483.00 2483 876 3 1 4 1003 5 0 1 18 24 341 207
...........................................................................................AATCACAGGATTATACTGTGAG.................................................. 22 0 1 1607.00 1607 955 392 204 2 1 3 13 8 9 19 0 1
...........................................................................................AATCACAGGATTATACTG...................................................... 18 0 1 1024.00 1024 182 2 3 9 514 11 2 1 1 1 113 185
................................................................................................CAGGATTATACTGTGAG.................................................. 17 0 1 733.00 733 684 16 27 0 0 0 3 3 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTT........................................................................................... 20 0 1 703.00 703 90 2 8 316 4 274 0 0 5 2 1 1
....................................................CGCAGTATATTTTTGTGTT............................................................................................ 19 0 1 614.00 614 105 0 2 276 0 229 1 0 1 0 0 0
...........................................................................................AATCACAGGATTATACTGTGAGA................................................. 23 0 1 558.00 558 4 283 200 0 0 0 44 25 0 2 0 0
....................................................CGCAGTATATTTTTGTGT............................................................................................. 18 0 1 558.00 558 62 1 0 275 0 217 1 0 2 0 0 0
.................................................................................................AGGATTATACTGTGAG.................................................. 16 0 1 530.00 530 164 176 95 0 0 0 51 44 0 0 0 0
...........................................................................................AATCACAGGATTATACT....................................................... 17 0 1 529.00 529 346 56 103 0 0 0 15 9 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTTT.......................................................................................... 21 0 1 498.00 498 193 50 43 52 1 50 24 21 40 24 0 0
...............................................................................................ACAGGATTATACTGTGA................................................... 17 0 1 448.00 448 387 12 46 0 0 0 1 2 0 0 0 0
...............................................................................................ACAGGATTATACTGT..................................................... 15 0 1 392.00 392 392 0 0 0 0 0 0 0 0 0 0 0
........................................................GTATATTTTTGTGTTTTG......................................................................................... 18 0 2 325.00 650 646 1 0 2 0 0 0 0 1 0 0 0
...........................................................................................AATCACAGGATTATACTGTGAGT................................................. 23 1 1 313.00 313 294 6 5 0 0 0 1 4 2 1 0 0
....................................................CGCAGTATATTTTTGTGTTTTGA........................................................................................ 23 1 1 264.00 264 5 118 75 0 0 0 29 32 3 2 0 0
..........................................................................TTTCGTTTTGCAACTCAAA...................................................................... 19 0 1 245.00 245 3 87 57 0 0 0 51 43 0 1 0 3
..............................................................................................CACAGGATTATACTGTGAG.................................................. 19 0 1 203.00 203 198 2 1 0 0 0 0 0 0 2 0 0
...........................................................................................AATCACAGGATTATACTGC..................................................... 19 1 1 198.00 198 5 0 0 0 136 0 0 0 1 0 29 27
...........................................................................................AATCACAGGATTATACTGG..................................................... 19 1 1 191.00 191 1 0 0 0 104 0 0 0 0 0 43 43
............................................................................................ATCACAGGATTATACTGTGAGA................................................. 22 0 1 146.00 146 3 32 25 0 0 0 39 44 0 3 0 0
.....................................................GCAGTATATTTTTGTGTTTTG......................................................................................... 21 0 1 113.00 113 83 0 1 0 0 1 0 0 11 17 0 0
..........................................................................TTTCGTTTTGCAACT.......................................................................... 15 0 3 100.00 300 0 9 156 0 0 0 86 49 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTG.................................................... 20 0 1 89.00 89 35 10 5 3 14 2 0 1 2 16 1 0
...........................................................................................AATCACAGGATTATACTGTGAA.................................................. 22 1 1 83.00 83 15 40 20 0 1 0 2 0 1 4 0 0
...........................................................................................AATCACAGGATTATACTTTGAG.................................................. 22 1 1 79.00 79 10 26 20 0 7 0 1 5 0 0 1 9
..................................................................................................GGATTATACTGTGAG.................................................. 15 0 1 77.00 77 43 7 24 0 0 0 0 3 0 0 0 0
....................................................CGCAGTATATTTTTGT............................................................................................... 16 0 1 77.00 77 77 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CAGGATTATACTGTGA................................................... 16 0 1 71.00 71 60 7 3 0 0 0 0 1 0 0 0 0
...........................................................................................AATCACATGATTATACTGTGA................................................... 21 1 1 64.00 64 1 40 16 0 0 0 1 6 0 0 0 0
...........................................................................................AATCACACGATTATACTGTGA................................................... 21 1 1 63.00 63 1 42 19 0 0 0 1 0 0 0 0 0
............................................................................................ATCACAGGATTATACTGTGAGT................................................. 22 1 1 62.00 62 61 0 0 0 0 0 0 0 0 0 1 0
..........................................................................TTTCGTTTTGCAACTCAAAA..................................................................... 20 1 1 55.00 55 2 23 11 0 0 0 14 3 1 0 0 1
....................................................CGCAGTATATTTTTGTGTTTTGT........................................................................................ 23 0 1 53.00 53 4 6 2 19 0 17 1 0 0 3 0 1
..............................................................................................CACAGGATTATACTGT..................................................... 16 0 1 47.00 47 47 0 0 0 0 0 0 0 0 0 0 0
.......................................................AGTATATTTTTGTGTTTTG......................................................................................... 19 0 2 45.50 91 89 0 0 0 0 0 0 0 0 2 0 0
....................................................CGCAGTATATTTTTGTGTTTTT......................................................................................... 22 1 1 41.00 41 4 1 0 0 0 0 0 0 35 1 0 0
...........................................................................................AATCACAGGATTATACTGTGG................................................... 21 1 1 39.00 39 2 2 0 0 20 0 0 0 0 3 2 10
.................................................................................................AGGATTATACTGTGA................................................... 15 0 1 37.00 37 6 19 4 0 0 0 2 6 0 0 0 0
...............................................................................................ACAGGATTATACTGTGAGT................................................. 19 1 1 36.00 36 34 0 2 0 0 0 0 0 0 0 0 0
..........................................................................TTTCGTTTTGCAACTCAAAAA.................................................................... 21 2 3 34.67 104 2 52 34 0 0 0 7 9 0 0 0 0
.............................................................................................TCACAGGATTATACTGTGAGA................................................. 21 0 1 34.00 34 1 9 5 0 1 0 9 9 0 0 0 0
...........................................................................................AATCACAGGATTATACTGAG.................................................... 20 1 1 33.00 33 4 6 11 0 2 0 2 1 0 1 0 6
...........................................................................................AATCACAGGATTATA......................................................... 15 0 1 31.00 31 30 0 0 0 0 0 1 0 0 0 0 0
..........................................................................TTTCGTTTTGCAACTCAA....................................................................... 18 0 2 28.50 57 1 7 18 0 0 0 19 12 0 0 0 0
............................................................................................ATCACAGGATTATACTGT..................................................... 18 0 1 27.00 27 25 0 0 0 0 0 0 0 0 2 0 0
...........................................................................................AATCACAGGATTATACTTTGA................................................... 21 1 1 25.00 25 0 17 2 0 3 0 2 1 0 0 0 0
..........................................................................TTTCGTTTTGCAACTCA........................................................................ 17 0 2 25.00 50 1 2 2 0 0 0 22 23 0 0 0 0
...........................................................................................AATCATAGGATTATACTGTGA................................................... 21 1 1 24.00 24 1 11 5 0 1 0 4 2 0 0 0 0
....................................................CCCAGTATATTTTTGTGTTTTG......................................................................................... 22 1 1 24.00 24 23 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................AATCACAGGATTATACTCTGAG.................................................. 22 1 1 22.00 22 0 5 2 0 2 0 1 1 0 0 3 8
...............................................................................................ACAGGATTATACTGTGAGA................................................. 19 0 1 21.00 21 11 3 7 0 0 0 0 0 0 0 0 0
....................................................CTCAGTATATTTTTGTGTTTTG......................................................................................... 22 1 1 21.00 21 16 0 0 0 0 0 2 1 0 0 0 2
..............................................................................................CACAGGATTATACTGTGA................................................... 18 0 1 20.00 20 14 2 3 0 0 0 0 0 0 1 0 0
...............................................................................................ACAGGATTATACTGTGAA.................................................. 18 1 1 20.00 20 19 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATATTGTGA................................................... 21 1 1 19.00 19 0 7 0 0 0 0 6 6 0 0 0 0
....................................................CGCAGTATATTTTTGTG.............................................................................................. 17 0 1 19.00 19 18 0 0 0 0 0 0 1 0 0 0 0
............................................................................................ATCACAGGATTATACTGTGA................................................... 20 0 1 19.00 19 0 1 0 0 0 0 0 1 0 17 0 0
........................................................GTATATTTTTGTGTTTT.......................................................................................... 17 0 2 17.00 34 34 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTGAAA................................................. 23 1 1 15.00 15 0 6 6 0 0 0 0 0 0 3 0 0
...............................................................................................ACAGGATTATACTGTGAGGT................................................ 20 1 1 14.00 14 14 0 0 0 0 0 0 0 0 0 0 0
....................................................CACAGTATATTTTTGTGTTTTG......................................................................................... 22 1 1 14.00 14 13 0 0 0 0 0 0 1 0 0 0 0
......................................................CAGTATATTTTTGTGTTTTG......................................................................................... 20 0 1 13.00 13 6 1 0 1 0 0 0 0 1 4 0 0
...............................................................................................ACAGGATTATACTGAG.................................................... 16 1 1 13.00 13 13 0 0 0 0 0 0 0 0 0 0 0
................................AATCACACGTCTCGACGCCT............................................................................................................... 20 0 1 13.00 13 7 0 0 0 4 0 0 0 0 0 2 0
....................................................CGCAGTATATTTTTGTGCTTTG......................................................................................... 22 1 1 13.00 13 5 1 2 0 1 0 0 0 3 1 0 0
.........................................................TATATTTTTGTGTTTTG......................................................................................... 17 0 4 12.75 51 51 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................AGAGGATTATACTGTGAG.................................................. 18 1 1 12.00 12 12 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................AGGATTATACTGTGAGA................................................. 17 0 1 12.00 12 0 9 0 0 0 0 1 2 0 0 0 0
...............................................................................................ACAGGATTATACTGTGAGC................................................. 19 1 1 12.00 12 12 0 0 0 0 0 0 0 0 0 0 0
....................................................TGCAGTATATTTTTGTGTTTTG......................................................................................... 22 1 1 12.00 12 3 0 0 0 0 0 1 0 6 2 0 0
....................................................CGCAGTATATTTTTGTGTTTTA......................................................................................... 22 1 1 11.00 11 8 2 0 0 0 0 0 1 0 0 0 0
............................................................................................ATCACAGGATTATACTGTGAG.................................................. 21 0 1 11.00 11 5 5 0 0 0 0 0 0 0 1 0 0
....................................................CGCAGTATCTTTTTGTGTTTTG......................................................................................... 22 1 1 11.00 11 3 2 0 0 0 0 0 0 1 5 0 0
...........................................................................................AATTACAGGATTATACTGTGAG.................................................. 22 1 1 11.00 11 6 5 0 0 0 0 0 0 0 0 0 0
..........................................................ATATTTTTGTGTTTTG......................................................................................... 16 0 7 10.71 75 74 0 1 0 0 0 0 0 0 0 0 0
....................................................CGCAGCATATTTTTGTGTTTTG......................................................................................... 22 1 1 10.00 10 5 0 0 0 2 0 0 0 3 0 0 0
....................................................CGCAGGATATTTTTGTGTTTTG......................................................................................... 22 1 1 10.00 10 0 0 0 0 2 0 0 0 7 1 0 0
...........................................................................................AATCACAGGATTATACTGA..................................................... 19 1 1 10.00 10 1 5 1 0 1 0 0 2 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTTTGAA....................................................................................... 24 2 1 10.00 10 0 4 3 0 0 0 1 2 0 0 0 0
...............................................................................................ACAGGATTATACTGTGAT.................................................. 18 1 1 9.00 9 8 1 0 0 0 0 0 0 0 0 0 0
....................................................CGCAATATATTTTTGTGTTTTG......................................................................................... 22 1 1 9.00 9 7 0 0 0 0 0 0 0 1 0 0 1
................................................................................................CAGGATTATACTGTGAGA................................................. 18 0 1 9.00 9 4 1 2 0 0 0 0 0 0 0 1 1
....................................................CGCAGTATATTTTTGTGTTTTGTT....................................................................................... 24 0 1 9.00 9 0 0 1 6 0 1 1 0 0 0 0 0
....................................................CGCAGTATATTTTTGTTTTTTG......................................................................................... 22 1 1 9.00 9 2 1 0 0 3 0 0 0 2 1 0 0
............................................................................................AATACAGGATTATACTGTGA................................................... 20 2 1 8.00 8 0 3 4 0 0 0 0 1 0 0 0 0
.....................................................GCAGTATATTTTTGTGTTTT.......................................................................................... 20 0 1 8.00 8 6 0 0 0 0 0 0 0 0 2 0 0
....................................................CGCAGTATATTTTTGTGTTTCG......................................................................................... 22 1 1 8.00 8 8 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTA.................................................... 20 1 1 8.00 8 0 1 1 0 2 0 0 0 0 0 1 3
....................................................CGCAGTATATTTTTGTGTTTTGAAA...................................................................................... 25 3 1 8.00 8 0 7 1 0 0 0 0 0 0 0 0 0
...................................................TCGCAGTATATTTTTGTGTTTTG......................................................................................... 23 0 1 8.00 8 2 0 0 1 0 3 1 0 0 1 0 0
...........................................................TATTTTTGTGTTTTG......................................................................................... 15 0 7 7.71 54 54 0 0 0 0 0 0 0 0 0 0 0
..........................................................................TTTCGTTTTGCAACTCAAAAAA................................................................... 22 2 2 7.50 15 0 11 3 0 0 0 0 1 0 0 0 0
...........................................................................................GATCACAGGATTATACTGTGA................................................... 21 1 1 7.00 7 1 2 0 0 0 0 2 1 0 1 0 0
...........................................................................................AATCACAGGATTATACTCTGA................................................... 21 1 1 7.00 7 0 1 1 0 1 0 1 0 0 0 0 3
...............................................................................................ACAGGATTATACTGTG.................................................... 16 0 1 7.00 7 6 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................AATCATAGGATTATACTGTGAG.................................................. 22 1 1 7.00 7 2 3 1 0 0 0 1 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGGGA................................................... 21 1 1 7.00 7 1 3 1 0 0 0 1 0 1 0 0 0
...........................................................................................AGTCACAGGATTATACTGT..................................................... 19 1 1 7.00 7 7 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACGGGATTATACTGTGA................................................... 21 1 1 7.00 7 2 1 2 0 0 0 0 0 1 1 0 0
...................................................TCGCAGTATATTTTTGTGTTT........................................................................................... 21 0 1 6.00 6 0 0 0 4 0 2 0 0 0 0 0 0
....................................................CGCAGTATACTTTTGTGTTTTG......................................................................................... 22 1 1 6.00 6 5 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................AATTACAGGATTATACTGTGA................................................... 21 1 1 6.00 6 1 2 0 0 0 0 2 1 0 0 0 0
....................................................CGCAGTATATTTCTGTGTTTTG......................................................................................... 22 1 1 6.00 6 3 0 0 0 0 0 0 0 2 1 0 0
....................................................CGCAGTATATTTTTGTGTTCTG......................................................................................... 22 1 1 6.00 6 4 0 0 0 0 0 1 0 0 1 0 0
...........................................................................................TATCACAGGATTATACTGTGA................................................... 21 1 1 6.00 6 0 1 0 0 0 0 2 3 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTGAGGTGT.............................................. 26 2 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCAGAGGATTATACTGTGA................................................... 21 1 1 6.00 6 0 3 0 0 0 0 2 1 0 0 0 0
..........................................................................TTTCGTTTTGCAACTCAAAAAAAA................................................................. 24 3 1 6.00 6 0 4 2 0 0 0 0 0 0 0 0 0
...............................................................................................ACAGGATTATACTGTGAGGG................................................ 20 2 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTGAGC................................................. 23 1 1 6.00 6 4 1 1 0 0 0 0 0 0 0 0 0
....................................................CGCAGTATATTTTTTTGTTTTG......................................................................................... 22 1 1 6.00 6 1 0 0 0 2 0 0 0 0 1 1 1
...............................................................................................ATAGGATTATACTGTGAG.................................................. 18 1 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0
....................................................CGAAGTATATTTTTGTGTTTTG......................................................................................... 22 1 1 6.00 6 2 0 0 0 0 0 0 0 4 0 0 0
...........................................................................................AATCACAGGATTATACTGCGAG.................................................. 22 1 1 6.00 6 4 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................GCAGGATTATACTGTGAG.................................................. 18 1 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AGTCACAGGATTATACTGTGAG.................................................. 22 1 1 6.00 6 5 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................CATCACAGGATTATACTGTGAG.................................................. 22 1 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGCGA................................................... 21 1 1 6.00 6 0 0 2 0 0 0 3 0 1 0 0 0
...........................................................................................AATCACAGGATTATACTTGA.................................................... 20 3 9 5.67 51 1 28 6 0 0 0 10 6 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTTTAA........................................................................................ 23 2 2 5.50 11 0 5 5 0 0 0 0 0 1 0 0 0
.................................ATCACACGTCTCGACGCCT............................................................................................................... 19 0 1 5.00 5 2 0 0 0 2 0 0 0 0 0 1 0
....................................................CGCGGTATATTTTTGTGTTTTG......................................................................................... 22 1 1 5.00 5 4 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................AATCACAGGATTATACTGTGAGAA................................................ 24 1 1 5.00 5 0 2 2 0 0 0 0 1 0 0 0 0
...............................................................................................ACGGGATTATACTGTGAG.................................................. 18 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................ATTCACAGGATTATACTGTGAG.................................................. 22 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0
....................................................CGCAGTGTATTTTTGTGTTTTG......................................................................................... 22 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACAGGATTGTACTGTGAG.................................................. 18 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0
....................................................CGCAGTATATTTTCGTGTTTTG......................................................................................... 22 1 1 5.00 5 4 0 0 0 0 0 0 0 1 0 0 0
....................................................CGCAGTATATTTTTCTGTTTTG......................................................................................... 22 1 1 5.00 5 0 0 0 0 3 0 0 0 1 0 0 1
...........................................................................................AATCACAGGATTATACTA...................................................... 18 1 1 5.00 5 1 0 2 0 0 0 0 2 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTTGG......................................................................................... 22 1 1 5.00 5 2 0 0 0 1 0 0 0 0 1 1 0
................................................................................................TAGGATTATACTGTGAG.................................................. 17 1 1 5.00 5 4 0 0 0 0 0 0 1 0 0 0 0
..................................TCACACGTCTCGACGCCT............................................................................................................... 18 0 1 5.00 5 0 0 0 0 1 0 0 0 0 0 0 4
................................................................................................CGGGATTATACTGTGAG.................................................. 17 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACTGGATTATACTGTGA................................................... 21 1 1 5.00 5 0 1 3 0 0 0 0 0 0 1 0 0
...........................................................................................AATCACCGGATTATACTGTGA................................................... 21 1 1 5.00 5 0 2 0 0 0 0 0 0 0 3 0 0
...........................................................................................AATCAGAGGATTATACTGTGAG.................................................. 22 1 1 5.00 5 2 1 1 0 0 0 1 0 0 0 0 0
....................................................CGCAGTATATTTTTGCGTTTTG......................................................................................... 22 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AAATCACAGGATTATACTGTGA................................................... 22 0 1 5.00 5 2 2 0 0 0 0 0 1 0 0 0 0
...........................................................................................AATGACAGGATTATACTGTGA................................................... 21 1 1 5.00 5 0 2 0 0 1 0 1 0 0 1 0 0
....................................................CGCAGTATGTTTTTGTGTTTTG......................................................................................... 22 1 1 5.00 5 4 0 0 0 0 0 0 0 1 0 0 0
..........................................................................TTTCGTTTTGCAACTC......................................................................... 16 0 2 4.50 9 0 2 2 0 0 0 2 3 0 0 0 0
...........................................................................................AATCACAGGTTTATACTGTGA................................................... 21 1 1 4.00 4 1 0 0 0 0 0 0 1 0 2 0 0
...........................................................................................AATCACAGGGTTATACTGTGAG.................................................. 22 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CCGGATTATACTGTGAG.................................................. 17 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
....................................................CGCAGTATATCTTTGTGTTTTG......................................................................................... 22 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................TATCACAGGATTATACTGTGAG.................................................. 22 1 1 4.00 4 3 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................AGGATTATACTGTGAGT................................................. 17 1 1 4.00 4 1 1 2 0 0 0 0 0 0 0 0 0
...........................................................................................AATCAAAGGATTATACTGTGA................................................... 21 1 1 4.00 4 0 2 0 0 0 0 0 2 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTAA.......................................................................................... 21 2 1 4.00 4 0 3 1 0 0 0 0 0 0 0 0 0
................................................................................................CAGGATTATACTGTGAGGG................................................ 19 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTTTTG........................................................................................ 23 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTACACTGTGA................................................... 21 1 1 4.00 4 1 1 1 0 0 0 0 0 0 1 0 0
....................................................CGTAGTATATTTTTGTGTTTTG......................................................................................... 22 1 1 4.00 4 2 0 1 0 0 0 0 0 1 0 0 0
................................................................................................CAGGATTATACTGTGAGC................................................. 18 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CAGGATTATACTGTGAGT................................................. 18 1 1 4.00 4 2 0 0 0 0 0 1 0 0 0 1 0
...................................................TCGCAGTATATTTTTGTGT............................................................................................. 19 0 1 4.00 4 2 0 0 2 0 0 0 0 0 0 0 0
..............................................................................................CACAGGATTATACTG...................................................... 15 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
...................................................TCGCAGTATATTTTTGTGTTTT.......................................................................................... 22 0 1 4.00 4 2 1 0 0 0 0 0 0 1 0 0 0
....................................................CGCAGTCTATTTTTGTGTTTTG......................................................................................... 22 1 1 4.00 4 0 0 2 0 0 0 0 0 1 1 0 0
....................................................CGCAGTATATTTTTGTGTCTTG......................................................................................... 22 1 1 4.00 4 3 0 0 0 0 0 0 0 1 0 0 0
...................................................TCGCAGTATATTTTTGTG.............................................................................................. 18 0 1 4.00 4 0 0 0 1 0 3 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTGTG......................................................................................... 22 1 1 4.00 4 3 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................AATCACAGGATTATACCTTGAG.................................................. 22 2 1 4.00 4 0 2 1 0 0 0 0 0 0 0 0 1
...........................................................................................GATCACAGGATTATACTGT..................................................... 19 1 1 4.00 4 2 0 0 0 0 0 0 0 0 0 0 2
...........................................................................................AATCACAGGATTATACTATGA................................................... 21 1 1 4.00 4 1 0 0 0 0 0 1 2 0 0 0 0
...............................................................................................ACAGGATTATACTGTGGG.................................................. 18 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTGAGTC................................................ 24 2 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
....................................................CGCAGTATATTCTTGTGTTTTG......................................................................................... 22 1 1 4.00 4 3 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................AATCACAGGATTATACTGTTAGA................................................. 23 1 1 4.00 4 0 2 2 0 0 0 0 0 0 0 0 0
..............................................................................................CACAGGATTATACTGTGAGA................................................. 20 0 1 4.00 4 0 4 0 0 0 0 0 0 0 0 0 0
......................................................CAGTATATTTTTGTGTTTT.......................................................................................... 19 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTTTGAGC................................................. 23 2 1 4.00 4 0 0 0 0 1 0 0 0 0 0 0 3
...............................................................................................ACAGGATTATACTGCGAG.................................................. 18 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
..........................................................................TTTCGTTTTGCAACTAAA....................................................................... 18 1 4 3.25 13 0 8 4 0 0 0 0 0 0 1 0 0
...........................................................................................AATCACAGGATTATACCGTGAG.................................................. 22 1 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................AAGCACAGGATTATACTGTGA................................................... 21 1 1 3.00 3 0 0 0 0 0 0 0 1 1 1 0 0
............................................................................................AATACAGGATTATACTGTGAG.................................................. 21 2 1 3.00 3 1 1 1 0 0 0 0 0 0 0 0 0
....................................................CGCTGTATATTTTTGTGTTTTG......................................................................................... 22 1 1 3.00 3 2 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................AGTCACAGGATTATACTCTGAG.................................................. 22 2 1 3.00 3 0 0 0 0 3 0 0 0 0 0 0 0
.....................................................GCAGTATATTTTTGTGTT............................................................................................ 18 0 1 3.00 3 1 0 0 2 0 0 0 0 0 0 0 0
...........................................................................................AATCGCAGGATTATACTGTGAG.................................................. 22 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTGTG.................................................. 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTG........................................................................................... 20 1 1 3.00 3 1 0 0 0 2 0 0 0 0 0 0 0
....................................................CGCAGTATATTTTTATGTTTTG......................................................................................... 22 1 1 3.00 3 2 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................AATCACAGGATTATACTGAGT................................................... 21 2 1 3.00 3 0 2 0 0 0 0 0 0 0 0 0 1
...........................................................................................AATCACAGGATTATACTCTG.................................................... 20 1 1 3.00 3 0 0 0 0 3 0 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGTATTTTG......................................................................................... 22 1 1 3.00 3 1 0 0 0 0 0 0 0 2 0 0 0
...........................................................................................AACCACAGGATTATACTGTGA................................................... 21 1 1 3.00 3 0 2 0 0 0 0 0 0 0 1 0 0
...............................................................................................ACAGGATTATGCTGTGAG.................................................. 18 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTCAGA................................................. 23 1 1 3.00 3 0 2 1 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTGAGGTC............................................... 25 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTAA................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCGCAGGATTATACTGTGAGT................................................. 23 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
...................................................CCGCAGTATATTTTTGTGTTTTG......................................................................................... 23 1 1 3.00 3 2 0 0 0 0 0 0 0 0 1 0 0
....................................................CGCAGTATATTTTTGTGTTTG.......................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGTATTATACTGTGA................................................... 21 1 1 3.00 3 0 0 1 0 0 0 0 1 0 0 1 0
....................................................CTCAGTATATTTTTGTGTTTT.......................................................................................... 21 1 1 3.00 3 1 0 0 0 0 0 0 2 0 0 0 0
...........................................................................................AATCACAGGATTATACTCTGAC.................................................. 22 2 1 3.00 3 0 0 0 0 2 0 0 0 0 0 1 0
....................................................CGCAGTATATTTTTGTTTTG........................................................................................... 20 2 4 3.00 12 9 0 0 0 1 0 0 0 0 0 0 2
...............................................................................................ACAGGATTACACTGTGAG.................................................. 18 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATAATGTGA................................................... 21 1 1 3.00 3 2 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................AGTCACAGGATTATACTGTGA................................................... 21 1 1 3.00 3 1 0 2 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTCA................................................... 21 1 1 3.00 3 2 0 0 0 0 0 0 0 0 1 0 0
....................................................CGCAGTGTATTTTTGTGTTTT.......................................................................................... 21 1 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATATTGTGAG.................................................. 22 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................TCACAGGATTATACTGT..................................................... 17 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTGAGGT................................................ 24 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTCAGGATTATACTGTGAG.................................................. 19 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTT...................................................... 18 1 1 3.00 3 2 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................ACTCACAGGATTATACTGTGA................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CTGGATTATACTGTGAG.................................................. 17 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
...............................GAATCACACGTCTCGACGCCT............................................................................................................... 21 0 1 3.00 3 1 0 0 0 0 0 1 0 0 0 0 1
...........................................................................................AACCACAGGATTATACTGTGAG.................................................. 22 1 1 3.00 3 1 0 2 0 0 0 0 0 0 0 0 0
...........................................................................................ACTCACAGGATTATACTGTGAG.................................................. 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGTGTGTTG......................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTATGAG.................................................. 22 1 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATAACAGGATTATACTGTGA................................................... 21 1 1 3.00 3 0 0 0 0 0 0 2 1 0 0 0 0
...........................................................................................GATCACAGGATTATACTGTGAGT................................................. 23 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
...................................................ACGCAGTATATTTTTGTGTTTTG......................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATAGTGTGA................................................... 21 1 1 3.00 3 0 2 0 0 0 0 0 1 0 0 0 0
...............................................................................................ACAGGATTATACTTTGAG.................................................. 18 1 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAAGATTATACTGTGA................................................... 21 1 1 3.00 3 0 1 0 0 0 0 1 1 0 0 0 0
...............................................................................................ACATGATTATACTGTGAG.................................................. 18 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
...................................................ACGCAGTATATTTTTGTGTTTT.......................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
.......................................................AGTATATTTTTGTGTTTT.......................................................................................... 18 0 2 2.50 5 5 0 0 0 0 0 0 0 0 0 0 0
..........................................................................TTTCGTTTTGCAACTAAAA...................................................................... 19 1 2 2.50 5 0 5 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGAGAG.................................................. 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTGGG.................................................. 22 1 1 2.00 2 1 0 0 0 0 0 0 0 0 1 0 0
....................................................CGCAGTATTTTTTTGTGTTTTG......................................................................................... 22 1 1 2.00 2 1 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................AATCATAGGATTATACTGT..................................................... 19 1 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0
...........................................................................................AATTATAGGATTATACTGTGAG.................................................. 22 2 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
...................................................................................................GATTATACTGTGAGA................................................. 15 0 1 2.00 2 1 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................ATTCACAGGATTATACTG...................................................... 18 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AAACACAGGATTATACTGTGA................................................... 21 1 1 2.00 2 1 0 0 0 0 0 1 0 0 0 0 0
...................................................TCGCAGTATATTTTTGTGTT............................................................................................ 20 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................CATGATTATACTGTGAG.................................................. 17 1 1 2.00 2 0 1 0 0 0 0 0 1 0 0 0 0
................................................................................................CAGGATTATACTGTGAT.................................................. 17 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTCT.......................................................................................... 21 1 1 2.00 2 1 0 0 0 0 0 0 0 0 1 0 0
............................................................................................ATCACAGGATTATACT....................................................... 16 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.....................................................GCAGTATATTTTTGTGTTT........................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAAGATTATACTGT..................................................... 19 1 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................AATCACAGGGTTATACTGTGA................................................... 21 1 1 2.00 2 1 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................ATGATTATACTGTGAG.................................................. 16 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACAGT..................................................... 19 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTAAGA................................................. 23 1 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTAT..................................................... 19 1 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................AATCACGGGATTATACTGTGAG.................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CACAGGATTATACTGTGAT.................................................. 19 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACAGGGTTATACTGTGAG.................................................. 18 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATGCTGTGA................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACAGGATTATACTGTGAGGA................................................ 20 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATAGT....................................................... 17 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACAGGACTATACTGTGAG.................................................. 18 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
............AGTGGTGGGATGGTGGGGG.................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACGGGATTATACTGT..................................................... 19 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
....................................................AGCAGGATATTTTTGTGTTTTG......................................................................................... 22 2 1 2.00 2 0 0 0 0 0 0 0 0 2 0 0 0
...........................................................................................AATCACAGGATTATACTCTGAGT................................................. 23 2 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 2
....................................................CGCAGTATATTTTTGTGTTTAG......................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AACTCACAGGATTATACTGTGAG.................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACAGGATTATACCGTGAG.................................................. 18 1 2 2.00 4 4 0 0 0 0 0 0 0 0 0 0 0
....................................................CGCACTATATTTTTGTGTTTTG......................................................................................... 22 1 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGTGCTTT.......................................................................................... 21 1 1 2.00 2 0 1 0 0 0 0 0 0 0 1 0 0
....................................................CGGAGTATATTTTTGTGTTTTG......................................................................................... 22 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
...............................................................................................AAAGGATTATACTGTGAG.................................................. 18 1 2 2.00 4 4 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CACGATTATACTGTGAG.................................................. 17 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTGAGCT................................................ 24 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTTTGAGT................................................. 23 2 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 1
...........................................................................................AATCACAGGATTATACTGTAAG.................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CAGGATTATACCGTGAG.................................................. 17 1 2 2.00 4 0 3 0 0 0 0 0 1 0 0 0 0
...........................................................................................AATCACAGGATCATACTGT..................................................... 19 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACAGGGTTATACTGTGA................................................... 17 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGGA.................................................... 20 2 1 2.00 2 0 0 0 0 0 0 1 1 0 0 0 0
....................................................GGCAGTATATTTTTGTGTTTTG......................................................................................... 22 1 1 2.00 2 1 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................AATCACAGGATTAAACTGTGA................................................... 21 1 1 2.00 2 0 1 0 0 0 0 0 0 0 1 0 0
....................................................CGCAGTATATTGTTGTGTTTTG......................................................................................... 22 1 1 2.00 2 0 0 0 0 0 0 0 0 0 2 0 0
................................................................................................CAGGATTATACTGTAAG.................................................. 17 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TGAGATCACAGGATTATACTGTGAG.................................................. 25 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACAGGATTATACTGTGAGGGC............................................... 21 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTGAGTGT............................................... 25 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AACACAGGATTATACTGTGAGT................................................. 22 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGTGA............................................................................................. 18 1 1 2.00 2 0 0 0 0 0 0 0 1 0 1 0 0
...........................................................................................AATCACAGGATTATACTGTGAGCGGACC............................................ 28 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTCTGAGA................................................. 23 1 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0
............................................................................................ATCACAGGATTATACTGTTAGT................................................. 22 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTTTACTGTGA................................................... 21 1 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACTGTGAT.................................................. 22 1 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTTTTTG....................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACAGGATTATACACTGA................................................... 21 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
....................................................CGCAGTATATTATTGTGTTTTG......................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.....................................................GCAGTATATTTTTGTG.............................................................................................. 16 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
....................................................CGCAGTATATTTTTGAGTTTTG......................................................................................... 22 1 1 2.00 2 1 0 0 0 0 0 0 0 0 1 0 0
..................................................................................................GGATTATACTGTGAGA................................................. 16 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................AATCACGGGATTATACTGG..................................................... 19 2 1 2.00 2 0 0 0 0 1 0 0 0 0 0 0 1
....................................................CGCAGAATATTTTTGTGTTTTG......................................................................................... 22 1 1 2.00 2 0 0 0 0 0 0 0 0 1 1 0 0
....................................................CGCAGTATATTTTTGTGTTTTGG........................................................................................ 23 1 1 2.00 2 0 0 0 0 0 0 0 0 0 2 0 0
...........................................................................................AATCACAGGATTATACCGT..................................................... 19 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ATATTATTGATATCATATCATTCGCTTTCTGCTGCTGGCACGCTGGTCATCTCACAGTATAATCCTGTGATTTGAGTTGCAAAACGAAACAAAACACAAAAATATACTGCGAGGCGTCGAGACGTGTGATTCCCCCCACCATCCCACCACTTCTATGTTAGGG
************************************..((((((...((.(((((((((((.(((((((.((((....((...))....)))).))))))).))))))))))).))...)).))))************************************* 		Read size # Mismatch Hit Count Total Norm Total
...........................................................................................AAACACAAAAAAATACTGTGA................................................... 21 2 3 0.33 1
.......TGACATCATATGATTCGGTTT....................................................................................................................................... 21 3 6 0.17 1
...........................TCTGCTGCTGGAACGC........................................................................................................................ 16 1 10 0.10 1
.............................................................ATCCTGTGATTGAAGTT..................................................................................... 17 2 13 0.08 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 2R:8866621-8866783 - dsi-mir-308 CCCTAA--------CA---TAGAAGTGGTG--------------------G--------------------GATGGT-------------------GGGGGGAATCAC---AC------GTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGTTTTGCAACTCAAATCACAGGATTATACTGTGAGATGACCAGCGTG---CCAGCAGC---------AGA---------------AA--GCGAATGA----------TAT-GATATCA-----ATAATAT
droSec2 scaffold_1:7611653-7611815 - dse-mir-308 CCCTAA--------CA---TAGAAGTGGTG--------------------G--------------G----GGATGGT-------------------GGGGGGA--ATC---AC------GTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGTTTTGCAACTCAAATCACAGGATTATACTGTGAGATGACCAGCGTG---CCAGCAGC---------AAA---------------AA--GCGAATGA----------TAT-TATATCA-----ATTATAT
dm3 chr2R:10103257-10103436 - dme-mir-308 CCCCAC--------CA---TTGAAGTGCTA--------------------T--------------GCCCGCCATCCGG--------ATGAGATGGCGGGGTTAATAAC---AC------GTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGTTTTGCAATCCAAATCACAGGATTATACTGTGAGATGACCAGCGTG---CCAGCAGC---------GAA---------------AA--GCGACTGA----------TAT-GATATCA-----ATTATAT
droEre2 scaffold_4845:15739181-15739365 + der-mir-308 CCCTTCCTCCC---CA---CCAAAGTGCTT--------------------T--------------GCCCGCCGTCCGG--------ATGATAT---GGGGGGAATCAC---AC------GTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGTTTTGCAAATCAAATCACAGGATTATACTGTGAGATGACCAGCGTGCCGCCAGCAGC---------AGA---------------AA--GTGACTGA----------CCA-GATTTGT-----ATTATAT
droYak3 2R:10041097-10041279 - dya-mir-308 CCCTCT--TTTCACTA---TGGAAGTGCTT--------------------T--------------GCCCGCCATCCGG--------ATGAGAT---GGGGGGAATCAC---AC------GTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCCTTTTGCAACTCAAATCACAGGATTATACTGTGAGATGACCAGCGTG---CCAGCAGC---------AGA---------------AA--GTGACTGA----------CAA-GATCTGT-----ATTATAA
droEug1 scf7180000409462:2740188-2740329 + CTCCAA--------CC---CAGAAGTG----------------------------------------------------------------------------ATCCC---AC------GTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTA-TTTTGTAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGTG---CCAGCAGC---------GAA---------------TA--ATGAATAA----------AAA-G-TGTAA-----AT--TAT
droBia1 scf7180000301506:3161410-3161576 + CCTCAG--------A---------GTTGTGTTA-----------------T--------------GCCCCCCATCCAGAGAAGA-----------------G-AACCC---AC------GTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTAGG-CTTTGAAACTCAAATCACAGGATTATACTGTGAGATGCCAAGCGTG---CCAGCAGC---------AGA---------------AA--GGGATTGA----------AGC-GTATTTA-----TTAATCT
droTak1 scf7180000414111:5696-5857 - CCTAAC--------TG---CAGAAGTGCTT--------------------C-------------------------CG--AAGT------------CATC-G-ATCCC---AC------GTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTGG-TTCTGAAACTCAAATCACAGGATTATACTGTGAGCTGACCAGCGTG---CCAGCAGC---------AAG---------------AA--GTTTATAG----------GATGGATTTGA-----ATTATAT
droEle1 scf7180000491349:772072-772234 + TCCTC---------CG---CAAAAGTGTTT--------------------G-------------------CCATCCCG--GAGA-----------------G-ATCCC---AC------GTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTG-TTTTGCAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGTG---CCAGCAGC---------CAA---------------GA--GTGAATGG----------AACTGGTTTGA-----GCAACAT
droRho1 scf7180000777200:420710-420870 - CTTTA--------------TAGAAGTGTGT--------------------T-------------------CCGTTCTG--GAGA-----------------G-ATCCC---AC------GTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTCG-TTTTGCAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGTG---CCAGCAGC---------GAA---------------GA--GTTTATGA----------AATTGGTTCTA-----GTAATCT
droFic1 scf7180000453948:328408-328568 + TCCCA---------------AGAAGTGTTA--------------------T--------------CC---ACATCCCG--AAGA-----------------G-AACCC---AC------GTCTCGACGACTCGCAGTATATTTTTGTGTTTTGTTGG-TTTTGGAACTCAAATCACAGGATTATACTGTGAGCTGACAAGCGTG---CCAGCAAC---------CAA---------------AG--AAATCTAA----------AACGGTTTGGA-----ATTAAAT
droKik1 scf7180000302385:233907-234065 - CCCCCC--------C----GCAAAGTGCTT--------------------C-------------------CTCTCC-G--A--A-----------------G-AACCC---AC------GTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTGTGTTTGAAAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGTG---CCAGCAAC---------AGC---------------AG--CAGCATAA----------TTA-GCCTTTA-----ATTATAG
droAna3 scaffold_13266:5819921-5820076 + dan-mir-308 CACTGA--------AATAAACAAGGTGATATCACTCTA--------------------------------CC--------------------------------ATCC---AT------GTCTCGTCGCCTCGCAGTATATTTTTGTGTTTTGTTTG-GTTTGAAACTCAAATCACAGGATTATACTGTGAGATGCCAAGCGTG---TCAGCAGC---------TGA---------------AACAGTGCATAA-----------------TTAA-----AGAATCC
droBip1 scf7180000396372:434902-435065 + ACTAAA--------C------AAGGTGATATCACTCCT--------------------------------AC--------------------------------ATCC---AT------GTCTCGTCGCCTCGCAGTATATTTTTGTGTTTTGTTTG-TTTTGAAACTCAAATCACAGGATTATACTGTGAGATGCCAAGCGTG---TCAGCAGC---------CGA---------------AT--ATCAGCAATTCAATATCTAAT-ATATCTA-----ATTATAC
dp5 3:16336957-16337116 - dps-mir-308 CTCCA-----------------AAGTGTTT--------------------T--------------CCTAGGTGTGCCG---AAA-----------------G-AAGCG---GC------GTCTTGACGCCTCGCAGTATATTTTTGTGTTTTGTTGT-GTCTGAAACGCAAATCACAGGATTATACTGTGAGATGCTGGGCGTG---CTATCAAG---------AGA---------------GT--GTGAACGG---------------AACCCAAGTGTATT-TTG
droPer2 scaffold_4:426221-426375 + dpe-mir-308 CTCCA-----------------ATGTGTTT--------------------T--------------CCTAGGTGTGCCG---AAA-----------------G-AATCG---GC------GTCTTGACGCCTCGCAGTATATTTTTGTGTTTTGTTGT-GTCTGAAACGCAAATCACAGGATTATACTGTGAGATGCTGGGCGTG---CTATCAGA---------G------------------A--GT--GTGA----------AAG-GAACCCA-----AGTGTAT
droWil2 scf2_1100000004513:1860888-1861058 + dwi-mir-308 CACCAA--------C---------ATGCTG-----------------------------------------GATACTG--ATTAAGGCTCT-----CGTC-G-AC--C---ACAGACTATTCTTG-CGTCTCGCAGTATATTTTTGTGTTTTGTTCAATTTGTCAACTCAAATCACAGGATTATACTGTGAGCTGCGAAATGGA---A-ATCCAC---------GCA---------------ACCATTT--TA-----AAATCAAATTG-ACTTA-------AATGT
droVir3 scaffold_12875:17605260-17605419 + dvi-mir-308 TTATTT--------A----TT-TATTGTTA--------------------T--------------TT---TAATTT-G--TA----------------------GCCAA-CGC------A-TTCGATGTCTCGCAGTATACTTTTGTGTTTTGTTTA-TTTTGAAAATCAAATCACAGGATTATACTGTGAGTTATCGGCTGTA---GCAACAAC---------AAA---------------AA--TCCATTTT---AGACACAAA-------GC-----TTTATAT
droMoj3 scaffold_6496:11229017-11229187 + dmo-mir-308 TTTATT---------C---TAAATTTGTTA--------------------A--------------GATTTTAATTTGA--------ATTATTT--------G-AA--C---AC------A-TTCGATGTCTCGCAGTATATTTTTGTGTTTTGTTTA-TTATAAAAATCAAATCACAGGATTATACTGTGAGTTATCGGCTGAA---ACAACAAC---------AAA---------------TT----GAATTA----AAATCATCT-GCTAGCT-----ATCATAT
droGri2 scaffold_15245:14076191-14076384 - dgr-mir-308 CATTAT---------T---TAGAAGTGTTTTCAATTTGATATACATATATAGATAGATCTGTTAAG---------------------------------------CCCACCAC-------TGTCGATGTCTCGCAGTATATTTTTGTGTTTTGTTTATTTTTGAAAATCAAATCACAGGATTATACTGTGAGTTATC------G---CCAGCAGCAAGGACAACCAAATTTTAATTTACCCAAA--------------------TAC-AATTACA-----CAAATAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
CCCTAA--------CA---TAGAAGTGGTG--------------------G--------------------GATGGT-------------------GGGGGGAATCAC---AC------GTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGTTTTGCAACTCAAATCACAGGATTATACTGTGAGATGACCAGCGTG---CCAGCAGC---------AGA---------------AA--GCGAATGA----------TAT-GATATCA-----ATAATATSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
...................................................................................................................................CGCAGTATATTTTTGTGTTTTG......................................................................................................................................2219196.00919673251419120212748623961461055893703815
..........................................................................................................................................................................AATCACAGGATTATACTGTGA................................................................................................2116064.006064107835362125357658224511223745
..............................................................................................................................................................................ACAGGATTATACTGTGAG...............................................................................................1812799.00279901000150015712706
..........................................................................................................................................................................AATCACAGGATTATACTGT..................................................................................................1912483.00248318100334120745240131876
..........................................................................................................................................................................AATCACAGGATTATACTGTGAG...............................................................................................2211607.00160791012319138392204955
..........................................................................................................................................................................AATCACAGGATTATACTG...................................................................................................1811024.001024151411318591112123182
...............................................................................................................................................................................CAGGATTATACTGTGAG...............................................................................................171733.007330000000331627684
...................................................................................................................................CGCAGTATATTTTTGTGTTT........................................................................................................................................201703.0070354113162742002890
...................................................................................................................................CGCAGTATATTTTTGTGTT.........................................................................................................................................191614.00614100027622901002105
..........................................................................................................................................................................AATCACAGGATTATACTGTGAGA..............................................................................................231558.00558000000244252832004
...................................................................................................................................CGCAGTATATTTTTGTGT..........................................................................................................................................181558.0055820002752170101062
................................................................................................................................................................................AGGATTATACTGTGAG...............................................................................................161530.005300000000514417695164
..........................................................................................................................................................................AATCACAGGATTATACT....................................................................................................171529.00529000000015956103346
...................................................................................................................................CGCAGTATATTTTTGTGTTTT.......................................................................................................................................211498.004984010052502424215043193
..............................................................................................................................................................................ACAGGATTATACTGTGA................................................................................................171448.004480000000121246387
..............................................................................................................................................................................ACAGGATTATACTGT..................................................................................................151392.0039200000000000392
.......................................................................................................................................GTATATTTTTGTGTTTTG......................................................................................................................................182325.0065010002000010646
.........................................................................................................................................................TTTCGTTTTGCAACTCAAA...................................................................................................................191245.002450003001514387573
.............................................................................................................................................................................CACAGGATTATACTGTGAG...............................................................................................191203.0020300000020021198
...........................................................................................................................................................................ATCACAGGATTATACTGTGAGA..............................................................................................221146.001460000003394432253
....................................................................................................................................GCAGTATATTTTTGTGTTTTG......................................................................................................................................211113.00113110000117000183
.........................................................................................................................................................TTTCGTTTTGCAACT.......................................................................................................................153100.003000000000864991560
..........................................................................................................................................................................AATCACAGGATTATACTGTG.................................................................................................20189.00892141032160110535
.................................................................................................................................................................................GGATTATACTGTGAG...............................................................................................15177.007700000000372443
...................................................................................................................................CGCAGTATATTTTTGT............................................................................................................................................16177.00770000000000077
...............................................................................................................................................................................CAGGATTATACTGTGA................................................................................................16171.00710000000017360
...................................................................................................................................CGCAGTATATTTTTGTGTTTTGT.....................................................................................................................................23153.005300011917310624
.............................................................................................................................................................................CACAGGATTATACTGT..................................................................................................16147.00470000000000047
......................................................................................................................................AGTATATTTTTGTGTTTTG......................................................................................................................................19245.50910000002000089
................................................................................................................................................................................AGGATTATACTGTGA................................................................................................15137.00370000000261946
............................................................................................................................................................................TCACAGGATTATACTGTGAGA..............................................................................................21134.0034010000099951
..........................................................................................................................................................................AATCACAGGATTATA......................................................................................................15131.00310000000100030
.........................................................................................................................................................TTTCGTTTTGCAACTCAA....................................................................................................................18228.5057000000019127181
...........................................................................................................................................................................ATCACAGGATTATACTGT..................................................................................................18127.00270000002000025
.........................................................................................................................................................TTTCGTTTTGCAACTCA.....................................................................................................................17225.005000000002223221
..............................................................................................................................................................................ACAGGATTATACTGTGAGA..............................................................................................19121.00210000000003711
.............................................................................................................................................................................CACAGGATTATACTGTGA................................................................................................18120.00200000001002314
...................................................................................................................................CGCAGTATATTTTTGTG...........................................................................................................................................17119.00190000000010018
...........................................................................................................................................................................ATCACAGGATTATACTGTGA................................................................................................20119.00190000001701100
.......................................................................................................................................GTATATTTTTGTGTTTT.......................................................................................................................................17217.00340000000000034
.....................................................................................................................................CAGTATATTTTTGTGTTTTG......................................................................................................................................20113.0013100010400106
......................................................................................................AATCAC---AC------GTCTCGACGCCT............................................................................................................................................................20113.0013042000000007
........................................................................................................................................TATATTTTTGTGTTTTG......................................................................................................................................17412.75510000000000051
................................................................................................................................................................................AGGATTATACTGTGAGA..............................................................................................17112.0012000000012900
...........................................................................................................................................................................ATCACAGGATTATACTGTGAG...............................................................................................21111.0011000000100505
.........................................................................................................................................ATATTTTTGTGTTTTG......................................................................................................................................16710.71750000000000174
...............................................................................................................................................................................CAGGATTATACTGTGAGA..............................................................................................1819.009001100000124
...................................................................................................................................CGCAGTATATTTTTGTGTTTTGTT....................................................................................................................................2419.009000061010010
....................................................................................................................................GCAGTATATTTTTGTGTTTT.......................................................................................................................................2018.008000000200006
..................................................................................................................................TCGCAGTATATTTTTGTGTTTTG......................................................................................................................................2318.008000013110002
..........................................................................................................................................TATTTTTGTGTTTTG......................................................................................................................................1577.71540000000000054
..............................................................................................................................................................................ACAGGATTATACTGTG.................................................................................................1617.007000000000016
..................................................................................................................................TCGCAGTATATTTTTGTGTTT........................................................................................................................................2116.006000042000000
.......................................................................................................ATCAC---AC------GTCTCGACGCCT............................................................................................................................................................1915.005021000000002
........................................................................................................TCAC---AC------GTCTCGACGCCT............................................................................................................................................................1815.005010400000000
.........................................................................................................................................................................AAATCACAGGATTATACTGTGA................................................................................................2215.005000000001202
.........................................................................................................................................................TTTCGTTTTGCAACTC......................................................................................................................1624.509000000023220
..................................................................................................................................TCGCAGTATATTTTTGTGT..........................................................................................................................................1914.004000020000002
.............................................................................................................................................................................CACAGGATTATACTG...................................................................................................1514.004000000000004
..................................................................................................................................TCGCAGTATATTTTTGTGTTTT.......................................................................................................................................2214.004100000000102
..................................................................................................................................TCGCAGTATATTTTTGTG...........................................................................................................................................1814.004000013000000
.............................................................................................................................................................................CACAGGATTATACTGTGAGA..............................................................................................2014.004000000000400
.....................................................................................................................................CAGTATATTTTTGTGTTTT.......................................................................................................................................1914.004000000000004
....................................................................................................................................GCAGTATATTTTTGTGTT.........................................................................................................................................1813.003000020000001
............................................................................................................................................................................TCACAGGATTATACTGT..................................................................................................1713.003000000000003
.....................................................................................................GAATCAC---AC------GTCTCGACGCCT............................................................................................................................................................2113.003000100010001
......................................................................................................................................AGTATATTTTTGTGTTTT.......................................................................................................................................1822.505000000000005
..................................................................................................................................................................................GATTATACTGTGAGA..............................................................................................1512.002000000001001
..................................................................................................................................TCGCAGTATATTTTTGTGTT.........................................................................................................................................2012.002000010000001
...........................................................................................................................................................................ATCACAGGATTATACT....................................................................................................1612.002000000000002
....................................................................................................................................GCAGTATATTTTTGTGTTT........................................................................................................................................1912.002000000000002
.......................AGTGGTG--------------------G--------------------GATGGT-------------------GGGGG..........................................................................................................................................................................................1912.002000000000002
....................................................................................................................................GCAGTATATTTTTGTG...........................................................................................................................................1612.002000000000002
.................................................................................................................................................................................GGATTATACTGTGAGA..............................................................................................1612.002000000000110
droSec2
CCCTAA--------CA---TAGAAGTGGTG--------------------G--------------G----GGATGGT-------------------GGGGGGA--ATC---AC------GTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGTTTTGCAACTCAAATCACAGGATTATACTGTGAGATGACCAGCGTG---CCAGCAGC---------AAA---------------AA--GCGAATGA----------TAT-TATATCA-----ATTATATSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
...................................................................................................................................CGCAGTATATTTTTGTGTTTTG......................................................................................................................................22136133.0036133119152995195801643
..........................................................................................................................................................................AATCACAGGATTATACTGTGA................................................................................................211638.0063825135206272
..........................................................................................................................................................................AATCACAGGATTATACTGT..................................................................................................191530.0053018187182143
...................................................................................................................................CGCAGTATATTTTTGTGTTTT.......................................................................................................................................211375.00375715116885
....................................................................................................................................GCAGTATATTTTTGTGTTTTG......................................................................................................................................211334.003347819103134
...................................................................................................................................CGCAGTATATTTTTGTGTTT........................................................................................................................................201150.001504010919
...................................................................................................................................CGCAGTATATTTTTGTGTT.........................................................................................................................................19171.0071332306
..........................................................................................................................................................................AATCACAGGATTATACTGTGAG...............................................................................................22163.0063110646
...................................................................................................................................CGCAGTATATTTTTGTGTTTTGT.....................................................................................................................................23156.0056294158
..........................................................................................................................................................................AATCACAGGATTATACTGTG.................................................................................................20142.0042011427
...................................................................................................................................CGCAGTATATTTTTGTGT..........................................................................................................................................18129.002905231
..........................................................................................................................................................................AATCACAGGATTATACTG...................................................................................................18125.002501483
.....................................................................................................................................CAGTATATTTTTGTGTTTTG......................................................................................................................................20122.002251511
......................................................................................................................................AGTATATTTTTGTGTTTTG......................................................................................................................................19122.002253311
...........................................................................................................................................................................ATCACAGGATTATACTGTGA................................................................................................20120.002000020
...........................................................................................................................................................................ATCACAGGATTATACTGT..................................................................................................18112.001200012
.......................................................................................................................................GTATATTTTTGTGTTTTG......................................................................................................................................18111.00112252
....................................................................................................................................GCAGTATATTTTTGTGTTTT.......................................................................................................................................20110.00101027
....................................................................................................GGA--ATC---AC------GTCTCGACGCCT............................................................................................................................................................2016.0060006
...........................................................................................................................................................................ATCACAGGATTATACTGTGAGA..............................................................................................2215.0050005
..................................................................................................................................TCGCAGTATATTTTTGTGTTTTG......................................................................................................................................2315.0050131
...............................................................................................................................................................................CAGGATTATACTGTGAGA..............................................................................................1815.0050203
.............................................................................................................................................................................CACAGGATTATACTGTGAG...............................................................................................1914.0040103
..............................................................................................................................................................................ACAGGATTATACTGTGAG...............................................................................................1814.0040202
..................................................................................................................................TCGCAGTATATTTTTGTGTTTT.......................................................................................................................................2212.0020011
...........................................................................................................................................................................ATCACAGGATTATACTGTGAG...............................................................................................2112.0020002
................................................................................................GGGGGGA--ATC---AC------GTCTCGACGCCT............................................................................................................................................................2412.0020002
.........................................................................................................................................................................AAATCACAGGATTATACTGTGA................................................................................................2212.0020101
....................................................................................................................................GCAGTATATTTTTGTGTTT........................................................................................................................................1912.0020011
............................................................................................................................................................................TCACAGGATTATACTGTGAGA..............................................................................................2112.0020002
............................................................................T-------------------GGGGGGA--ATC---AC------GTCTCGACGCCT............................................................................................................................................................2512.0020002
.........................................................................................................................................................TTTCGTTTTGCAACTCAAA...................................................................................................................1912.0020200
........................................................................................................................................................................CAAATCACAGGATTATACTGTG.................................................................................................2211.0010001
............................................................................................................................................................................TCACAGGATTATACTGTGA................................................................................................1911.0010001
..................................................................................................GGGGA--ATC---AC------GTCTCGACGCCT............................................................................................................................................................2211.0010001
...................................................................................................................................CGCAGTATATTTTTGTGTTTTGTT....................................................................................................................................2411.0011000
...................................................................................................GGGA--ATC---AC------GTCTCGACGCCT............................................................................................................................................................2111.0010001
..................................................................................................................................TCGCAGTATATTTTTGTGTTTTGTTTC..................................................................................................................................2711.0011000
...............................................................................................................................................................TTTGCAACTCAAATCACAGGAT..........................................................................................................2211.0010001
................................................................................................................................................................................................ATGACCAGCGTG---CCAGCAGC---------AA.............................................................2211.0010001
...................................................................................................................................CGCAGTATATTTTTGTGTTTTGTTTC..................................................................................................................................2611.0010100
.....................................................................................................................................CAGTATATTTTTGTGTTTTGTTTC..................................................................................................................................2411.0010100
....................................................................................................................................GCAGTATATTTTTGTGTT.........................................................................................................................................1811.0010001
................................................................................................................................................................TTGCAACTCAAATCACAGGATTATACTGT..................................................................................................2911.0011000
.....................................................................................................................................CAGTATATTTTTGTGTTT........................................................................................................................................1811.0010001
droEre2
CCCTTCCTCCC---CA---CCAAAGTGCTT--------------------T--------------GCCCGCCGTCCGG--------ATGATAT---GGGGGGAATCAC---AC------GTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGTTTTGCAAATCAAATCACAGGATTATACTGTGAGATGACCAGCGTGCCGCCAGCAGC---------AGA---------------AA--GTGACTGA----------CCA-GATTTGT-----ATTATATSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
...................................................................................................................................CGCAGTATATTTTTGTGTTTTG......................................................................................................................................2218606.008606156586185450639407
..........................................................................................................................................................................AATCACAGGATTATACTGTGA................................................................................................2111187.00118748464030169062
..........................................................................................................................................................................AATCACAGGATTATACTGT..................................................................................................191506.00506262115015913515
...................................................................................................................................CGCAGTATATTTTTGTGTTTT.......................................................................................................................................211399.00399151767209874
....................................................................................................................................GCAGTATATTTTTGTGTTTTG......................................................................................................................................211143.00143032425910
..........................................................................................................................................................................AATCACAGGATTATACTGTGAG...............................................................................................221102.0010210414821
..........................................................................................................................................................................AATCACAGGATTATACTGTG.................................................................................................20182.008204222540
...................................................................................................................................CGCAGTATATTTTTGTGTTT........................................................................................................................................20167.0067231435121
...........................................................................................................................................................................ATCACAGGATTATACTGTGA................................................................................................20135.00350000350
...................................................................................................................................CGCAGTATATTTTTGTGTT.........................................................................................................................................19127.00273291120
......................................................................................................................................AGTATATTTTTGTGTTTTG......................................................................................................................................19122.0022116590
..........................................................................................................................................................................AATCACAGGATTATACTG...................................................................................................18119.00190001252
...................................................................................................................................CGCAGTATATTTTTGTGTTTTGT.....................................................................................................................................23117.0017028520
...................................................................................................................................CGCAGTATATTTTTGTGTTTTGTT....................................................................................................................................24114.0014103640
........................................................................................................................................................................CAAATCACAGGATTATACTGTGA................................................................................................23113.0013100273
.....................................................................................................................................CAGTATATTTTTGTGTTTTG......................................................................................................................................20112.0012002550
...................................................................................................................................CGCAGTATATTTTTGTGT..........................................................................................................................................18111.0011002900
....................................................................................................................................GCAGTATATTTTTGTGTTTT.......................................................................................................................................20110.0010010180
...........................................................................................................................................................................ATCACAGGATTATACTGTGAG...............................................................................................2118.008000080
...........................................................................................................................................................................ATCACAGGATTATACTGTGAGA..............................................................................................2216.006000150
...........................................................................................................................................................................ATCACAGGATTATACTGTG.................................................................................................1916.006000150
..................................................................................................................................TCGCAGTATATTTTTGTGTTTTG......................................................................................................................................2316.006010410
.......................................................................................................................................GTATATTTTTGTGTTTTG......................................................................................................................................1815.005002210
........................................................................................................................................................................CAAATCACAGGATTATACTGTG.................................................................................................2214.004000040
.........................................................................................................................................................................AAATCACAGGATTATACTGTGA................................................................................................2214.004000031
............................................................................................................................................................................TCACAGGATTATACTGTGA................................................................................................1913.003000030
.....................................................................................................................................CAGTATATTTTTGTGTTTTGTT....................................................................................................................................2213.003001020
............................................................................................................................................................................TCACAGGATTATACTGTGAGA..............................................................................................2113.003000030
...........................................................................................................................................................................ATCACAGGATTATACTGT..................................................................................................1813.003000030
......................................................................................................AATCAC---AC------GTCTCGACGCCT............................................................................................................................................................2013.003001101
.....................................................................................................GAATCAC---AC------GTCTCGACGCCT............................................................................................................................................................2112.002000011
..............................................................................................................................................................................ACAGGATTATACTGTGAG...............................................................................................1812.002000110
....................................................................................................................................GCAGTATATTTTTGTGTTT........................................................................................................................................1912.002000110
.............................................................................................................................................................................CACAGGATTATACTGTGAG...............................................................................................1911.001000100
...................................................................................................................................CGCAGTATATTTTTGTGTTTTGTTTC..................................................................................................................................2611.001100000
.........................................................................................................................................................................AAATCACAGGATTATACTGTG.................................................................................................2111.001000010
.......................................................................................................................................GTATATTTTTGTGTTTTGT.....................................................................................................................................1911.001001000
......................................................................................................................................AGTATATTTTTGTGTTTT.......................................................................................................................................1811.001000100
.........................................................................................................................................................................AAATCACAGGATTATACTGT..................................................................................................2011.001000001
.......................................................................................................ATCAC---AC------GTCTCGACGCCT............................................................................................................................................................1911.001001000
...................................................................................................................................CGCAGTATATTTTTGTGTTTTGTTT...................................................................................................................................2511.001000100
................................................................................................................................................................................................ATGACCAGCGTGCCGCCAGCAGC---------...............................................................2311.001000100
...................................................................................................GGGAATCAC---AC------GTCTCGACGCCT............................................................................................................................................................2311.001000010
........................................................................................................................................................................CAAATCACAGGATTATACTGT..................................................................................................2111.001001000
............................................................................................................................................................................TCACAGGATTATACTGTGAG...............................................................................................2011.001000010
..........................................................................................................................................................................AATCACAGGATTATACTGTGAGA..............................................................................................2311.001000010
.......................................................................................................................................................................TCAAATCACAGGATTATACTG...................................................................................................2111.001010000
droYak3
CCCTCT--TTTCACTA---TGGAAGTGCTT--------------------T--------------GCCCGCCATCCGG--------ATGAGAT---GGGGGGAATCAC---AC------GTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCCTTTTGCAACTCAAATCACAGGATTATACTGTGAGATGACCAGCGTG---CCAGCAGC---------AGA---------------AA--GTGACTGA----------CAA-GATCTGT-----ATTATAASizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
..........................................................................................................................................................................AATCACAGGATTATACTGTGA................................................................................................2112801.002801952564781699921
...................................................................................................................................CGCAGTATATTTTTGTGTTTTG......................................................................................................................................2211564.0015645151113141953434847
..........................................................................................................................................................................AATCACAGGATTATACTGT..................................................................................................191398.00398102947501517536
..........................................................................................................................................................................AATCACAGGATTATACTGTGAG...............................................................................................221135.001358001010323
..........................................................................................................................................................................AATCACAGGATTATACTGTG.................................................................................................201111.00111000111072
...........................................................................................................................................................................ATCACAGGATTATACTGTGA................................................................................................20191.009100000910
...................................................................................................................................CGCAGTATATTTTTGTGTTTT.......................................................................................................................................21187.0087337790292
..........................................................................................................................................................................AATCACAGGATTATACTG...................................................................................................18178.0078110263011
....................................................................................................................................GCAGTATATTTTTGTGTTTTG......................................................................................................................................21148.004853220360
...................................................................................................................................CGCAGTATATTTTTGTGTT.........................................................................................................................................19111.00115010041
.........................................................................................................................................................................AAATCACAGGATTATACTGTGA................................................................................................2218.0080000053
............................................................................................................................................................................TCACAGGATTATACTGTGA................................................................................................1916.0060000060
...........................................................................................................................................................................ATCACAGGATTATACTGTGAGA..............................................................................................2216.0060000060
...................................................................................................................................CGCAGTATATTTTTGTGTTTTGT.....................................................................................................................................2316.0060110022
.............................................................................................................................................................................CACAGGATTATACTGTGAG...............................................................................................1916.0060000060
......................................................................................................................................AGTATATTTTTGTGTTTTG......................................................................................................................................1916.0060010050
...........................................................................................................................................................................ATCACAGGATTATACTGTGAG...............................................................................................2115.0050000050
.....................................................................................................................................CAGTATATTTTTGTGTTTTG......................................................................................................................................2014.0041000012
...........................................................................................................................................................................ATCACAGGATTATACTGTG.................................................................................................1914.0040000040
...........................................................................................................................................................................ATCACAGGATTATACTGT..................................................................................................1813.0030000030
...................................................................................................................................CGCAGTATATTTTTGTGTTT........................................................................................................................................2013.0030200010
..............................................................................................................................................................................ACAGGATTATACTGTGAG...............................................................................................1813.0030100011
....................................................................................................................................GCAGTATATTTTTGTGTTTT.......................................................................................................................................2012.0020000020
..........................................................................................................................................................................AATCACAGGATTATACTGTGAGA..............................................................................................2312.0020000020
..................................................................................................................................TCGCAGTATATTTTTGTGTTTTG......................................................................................................................................2312.0020000020
............................................................................................................................................................................TCACAGGATTATACTGTGAG...............................................................................................2012.0020000020
.........................................................................................................................................................TTTCCTTTTGCAACTCAAA...................................................................................................................1912.0020000011
..................................................................................................................................TCGCAGTATATTTTTGTGTTTT.......................................................................................................................................2212.0021000010
.........................................................................................................................................................................AAATCACAGGATTATACTG...................................................................................................1911.0010000010
...........................................................................................AT---GGGGGGAATCAC---AC------GTCTCGACGCCT............................................................................................................................................................2811.0010000001
.....................................................................................................GAATCAC---AC------GTCTCGACGCCT............................................................................................................................................................2111.0010000010
...............................................................................................................................................................................CAGGATTATACTGTGAGA..............................................................................................1811.0010000010
.............................................................................................................................................................................CACAGGATTATACTGTGA................................................................................................1811.0010000010
....................................................................................................................................GCAGTATATTTTTGTGTT.........................................................................................................................................1811.0010000010
................................................................................................................................................................TTGCAACTCAAATCACAGGATTATAC.....................................................................................................2611.0010000010
..........................................................................................................................................................................................................TG---CCAGCAGC---------AGA---------------AA--GTGACT...................................2111.0010000100
....................................................................................................GGAATCAC---AC------GTCTCGACGCCT............................................................................................................................................................2211.0010000010
................................................................................................GGGGGGAATCAC---AC------GTCTCGACGCCT............................................................................................................................................................2611.0010000001
.......................................................................................................................................GTATATTTTTGTGTTTTG......................................................................................................................................1811.0010000010
.................................................................................................GGGGGAATCAC---AC------GTCTCGACGCCT............................................................................................................................................................2511.0010000001
..........................................................................................................................................................................AATCACAGGATTATACTGTGAGAT.............................................................................................2411.0010000001
...................................................................................................................................CGCAGTATATTTTTGTGTTTTGTTTCCT................................................................................................................................2811.0010000010
.................................................................................................................................................................TGCAACTCAAATCACAGGATTATACTG...................................................................................................2711.0010000010
droEug1
CTCCAA--------CC---CAGAAGTG----------------------------------------------------------------------------ATCCC---AC------GTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTA-TTTTGTAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGTG---CCAGCAGC---------GAA---------------TA--ATGAATAA----------AAA-G-TGTAA-----AT--TATSizeHit CountTotal NormTotal
No Reads
droBia1
CCTCAG--------A---------GTTGTGTTA-----------------T--------------GCCCCCCATCCAGAGAAGA-----------------G-AACCC---AC------GTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTAGG-CTTTGAAACTCAAATCACAGGATTATACTGTGAGATGCCAAGCGTG---CCAGCAGC---------AGA---------------AA--GGGATTGA----------AGC-GTATTTA-----TTAATCTSizeHit CountTotal NormTotal
No Reads
droTak1
CCTAAC--------TG---CAGAAGTGCTT--------------------C-------------------------CG--AAGT------------CATC-G-ATCCC---AC------GTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTGG-TTCTGAAACTCAAATCACAGGATTATACTGTGAGCTGACCAGCGTG---CCAGCAGC---------AAG---------------AA--GTTTATAG----------GATGGATTTGA-----ATTATATSizeHit CountTotal NormTotal
No Reads
droEle1
TCCTC---------CG---CAAAAGTGTTT--------------------G-------------------CCATCCCG--GAGA-----------------G-ATCCC---AC------GTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTG-TTTTGCAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGTG---CCAGCAGC---------CAA---------------GA--GTGAATGG----------AACTGGTTTGA-----GCAACATSizeHit CountTotal NormTotal
No Reads
droRho1
CTTTA--------------TAGAAGTGTGT--------------------T-------------------CCGTTCTG--GAGA-----------------G-ATCCC---AC------GTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTCG-TTTTGCAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGTG---CCAGCAGC---------GAA---------------GA--GTTTATGA----------AATTGGTTCTA-----GTAATCTSizeHit CountTotal NormTotal
No Reads
droFic1
TCCCA---------------AGAAGTGTTA--------------------T--------------CC---ACATCCCG--AAGA-----------------G-AACCC---AC------GTCTCGACGACTCGCAGTATATTTTTGTGTTTTGTTGG-TTTTGGAACTCAAATCACAGGATTATACTGTGAGCTGACAAGCGTG---CCAGCAAC---------CAA---------------AG--AAATCTAA----------AACGGTTTGGA-----ATTAAATSizeHit CountTotal NormTotal
No Reads
droKik1
CCCCCC--------C----GCAAAGTGCTT--------------------C-------------------CTCTCC-G--A--A-----------------G-AACCC---AC------GTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTGTGTTTGAAAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGTG---CCAGCAAC---------AGC---------------AG--CAGCATAA----------TTA-GCCTTTA-----ATTATAGSizeHit CountTotal NormTotal
No Reads
droAna3
CACTGA--------AATAAACAAGGTGATATCACTCTA--------------------------------CC--------------------------------ATCC---AT------GTCTCGTCGCCTCGCAGTATATTTTTGTGTTTTGTTTG-GTTTGAAACTCAAATCACAGGATTATACTGTGAGATGCCAAGCGTG---TCAGCAGC---------TGA---------------AACAGTGCATAA-----------------TTAA-----AGAATCCSizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
...................................................................................................................................CGCAGTATATTTTTGTGTTTTG......................................................................................................................................2218324.008324242946199257423245
..........................................................................................................................................................................AATCACAGGATTATACTGTGA................................................................................................2111480.00148083255678101912
..........................................................................................................................................................................AATCACAGGATTATACTGT..................................................................................................191280.002801910068143643
...................................................................................................................................CGCAGTATATTTTTGTGTTTT.......................................................................................................................................211134.0013415691710518
....................................................................................................................................GCAGTATATTTTTGTGTTTTG......................................................................................................................................21159.0059132511190
...................................................................................................................................CGCAGTATATTTTTGTGTTT........................................................................................................................................20158.005815307033
..........................................................................................................................................................................AATCACAGGATTATACTGTG.................................................................................................20138.003812142100
..........................................................................................................................................................................AATCACAGGATTATACTGTGAG...............................................................................................22135.003501355102
...................................................................................................................................CGCAGTATATTTTTGTGTT.........................................................................................................................................19125.00258115010
..........................................................................................................................................................................AATCACAGGATTATACTG...................................................................................................18118.00180220212
...................................................................................................................................CGCAGTATATTTTTGTGTTTTGT.....................................................................................................................................23116.0016930022
...................................................................................................................................CGCAGTATATTTTTGTGT..........................................................................................................................................18110.0010271000
.........................................................................................................................................................................AAATCACAGGATTATACTGTGA................................................................................................22110.0010000037
.......................................................................................................................................GTATATTTTTGTGTTTTG......................................................................................................................................1817.007401020
.....................................................................................................................................CAGTATATTTTTGTGTTTTG......................................................................................................................................2017.007150010
...........................................................................................................................................................................ATCACAGGATTATACTGT..................................................................................................1815.005000050
...........................................................................................................................................................................ATCACAGGATTATACTGTGA................................................................................................2015.005000041
......................................................................................................................................AGTATATTTTTGTGTTTTG......................................................................................................................................1914.004211000
....................................................................................................................................GCAGTATATTTTTGTGTTTT.......................................................................................................................................2014.004020020
.....................................A--------------------------------CC--------------------------------ATCC---AT------GTCTCGTCGCCT............................................................................................................................................................2113.003010002
..................................................................................................................................TCGCAGTATATTTTTGTGTTTTG......................................................................................................................................2313.003011001
..............................................................................................................................................................................ACAGGATTATACTGTGAG...............................................................................................1812.002020000
.......................................................................................................................................................................TCAAATCACAGGATTATACTGT..................................................................................................2212.002110000
..................................................................................................................................TCGCAGTATATTTTTGTGTTTT.......................................................................................................................................2211.001010000
...................................CTA--------------------------------CC--------------------------------ATCC---AT------GTCTCGTCGCCT............................................................................................................................................................2311.001000010
................................................................................................................................................................TTGAAACTCAAATCACAGGATTATACT....................................................................................................2711.001000001
......................................................................................................................................AGTATATTTTTGTGTTTT.......................................................................................................................................1811.001000001
...................................................................................................................................CGCAGTATATTTTTGTGTTTTGTTTG-.................................................................................................................................2611.001000100
...................................................................................................................................CGCAGTATATTTTTGTGTTTTGTT....................................................................................................................................2411.001100000
.................................................................................................................................................................TGAAACTCAAATCACAGGATT.........................................................................................................2111.001000001
.......................................................................C--------------------------------ATCC---AT------GTCTCGTCGCCT............................................................................................................................................................1911.001000010
.......................................................................................................................................................................TCAAATCACAGGATTATACTG...................................................................................................2111.001000001
.............................................................................................................................................................................CACAGGATTATACTGTGA................................................................................................1811.001000001
...........................................................................................................................................................................ATCACAGGATTATACTGTGAGA..............................................................................................2211.001000010
.........................................................................................................................................................................AAATCACAGGATTATACTGTG.................................................................................................2111.001000010
droBip1
ACTAAA--------C------AAGGTGATATCACTCCT--------------------------------AC--------------------------------ATCC---AT------GTCTCGTCGCCTCGCAGTATATTTTTGTGTTTTGTTTG-TTTTGAAACTCAAATCACAGGATTATACTGTGAGATGCCAAGCGTG---TCAGCAGC---------CGA---------------AT--ATCAGCAATTCAATATCTAAT-ATATCTA-----ATTATACSizeHit CountTotal NormTotal
No Reads
dp5
CTCCA-----------------AAGTGTTT--------------------T--------------CCTAGGTGTGCCG---AAA-----------------G-AAGCG---GC------GTCTTGACGCCTCGCAGTATATTTTTGTGTTTTGTTGT-GTCTGAAACGCAAATCACAGGATTATACTGTGAGATGCTGGGCGTG---CTATCAAG---------AGA---------------GT--GTGAACGG---------------AACCCAAGTGTATT-TTGSizeHit CountTotal NormTotalV112
Male-body		V043
Embryo		V051
Head		M022
Male-body		M040
Female-body		M059
Embryo		M062
Head
..........................................................................................................................................................................AATCACAGGATTATACTGTGA................................................................................................2112477.00247713655912034113192
...................................................................................................................................CGCAGTATATTTTTGTGTTTTG......................................................................................................................................2212231.0022316654604723593335
..........................................................................................................................................................................AATCACAGGATTATACTGT..................................................................................................191391.00391838449274171
..........................................................................................................................................................................AATCACAGGATTATACTGTG.................................................................................................201264.002641011024804
..........................................................................................................................................................................AATCACAGGATTATACTGTGAG...............................................................................................221113.00113045010211
...........................................................................................................................................................................ATCACAGGATTATACTGTGA................................................................................................201110.00110000011000
...................................................................................................................................CGCAGTATATTTTTGTGTTTT.......................................................................................................................................21186.008620202401831
....................................................................................................................................GCAGTATATTTTTGTGTTTTG......................................................................................................................................21166.006656305200
...................................................................................................................................CGCAGTATATTTTTGTGTTT........................................................................................................................................20146.0046184501810
.........................................................................................................................................................................AAATCACAGGATTATACTGTGA................................................................................................22130.003001002063
...................................................................................................................................CGCAGTATATTTTTGTGTTTTGT.....................................................................................................................................23125.002542201520
...................................................................................................................................CGCAGTATATTTTTGTGTT.........................................................................................................................................19124.00246720900
...........................................................................................................................................................................ATCACAGGATTATACTGT..................................................................................................18122.002200002200
.............................................................................................................................................................................CACAGGATTATACTGTGAG...............................................................................................19119.001900001900
..........................................................................................................................................................................AATCACAGGATTATACTG...................................................................................................18118.00180118143
...........................................................................................................................................................................ATCACAGGATTATACTGTG.................................................................................................19118.001800001800
...........................................................................................................................................................................ATCACAGGATTATACTGTGAG...............................................................................................21114.001400001400
...........................................................................................................................................................................ATCACAGGATTATACTGTGAGA..............................................................................................2218.0080000800
.........................................................................................................................................................................AAATCACAGGATTATACTGTG.................................................................................................2118.0080000800
......................................................................................................................................AGTATATTTTTGTGTTTTG......................................................................................................................................1917.0070000700
.....................................................................................................................................CAGTATATTTTTGTGTTTTG......................................................................................................................................2017.0072100400
.......................................................................................................................................GTATATTTTTGTGTTTTG......................................................................................................................................1816.0060000600
............................................................................................................................................................................TCACAGGATTATACTGTGAG...............................................................................................2016.0060000600
....................................................................................................................................GCAGTATATTTTTGTGTTTT.......................................................................................................................................2015.0050010400
............................................................................................................................................................................TCACAGGATTATACTGTGAGA..............................................................................................2114.0040000400
...................................................................................................................................CGCAGTATATTTTTGTGTTTTGTTG...................................................................................................................................2513.0030110100
.........................................................................................................................................................................AAATCACAGGATTATACTGT..................................................................................................2013.0030100200
............................................................................................................................................................................TCACAGGATTATACTGTGA................................................................................................1912.0020000200
.........................................................................................................................................................................AAATCACAGGATTATACTG...................................................................................................1912.0020011000
..................................................................................................................................TCGCAGTATATTTTTGTGTTTTG......................................................................................................................................2312.0020010100
....................................................................................................................................GCAGTATATTTTTGTGTTT........................................................................................................................................1912.0020000200
....................................................................................................................................GCAGTATATTTTTGTGTT.........................................................................................................................................1812.0020010100
...................................................................................................................................CGCAGTATATTTTTGTGTTTTGTT....................................................................................................................................2412.0022000000
...............................................................................................................................................................................CAGGATTATACTGTGAGA..............................................................................................1811.0010000010
..................................................................................AA-----------------G-AAGCG---GC------GTCTTGACGCCT............................................................................................................................................................2211.0010000100
.........................................................................................................................................................................AAATCACAGGATTATACTGTGAG...............................................................................................2311.0010000100
.............................................................................................................................................................................CACAGGATTATACTGTGAGA..............................................................................................2011.0010000100
...................................................................................................................................................................AAACGCAAATCACAGGATTATACTGTGA................................................................................................2811.0010000100
............................................................................................................................................................................TCACAGGATTATACTGTG.................................................................................................1811.0010000100
...................................................................................................................................CGCAGTATATTTTTGTGT..........................................................................................................................................1811.0010010000
....................................................................................................................................GCAGTATATTTTTGTGTTTTGT.....................................................................................................................................2211.0010000100
....A-----------------AAGTGTTT--------------------T--------------CCTAGGTGTG....................................................................................................................................................................................................................2011.0010000100
.......................................................................................................................................GTATATTTTTGTGTTTTGT.....................................................................................................................................1911.0010000100
....................................................................................................................................GCAGTATATTTTTGTGTTTTGTTG...................................................................................................................................2411.0010000100
..........................................................................................................................................................................AATCACAGGATTATACTGTGAGA..............................................................................................2311.0010000100
.............................................................................................................................................................................CACAGGATTATACTGTGA................................................................................................1811.0010000100
................................................................................................................................................................................................ATGCTGGGCGTG---CTATCAAG---------AGA---------------.............................................2311.0010100000
..............................................................................................................................................................................ACAGGATTATACTGTGAG...............................................................................................1811.0010000100
droPer2
CTCCA-----------------ATGTGTTT--------------------T--------------CCTAGGTGTGCCG---AAA-----------------G-AATCG---GC------GTCTTGACGCCTCGCAGTATATTTTTGTGTTTTGTTGT-GTCTGAAACGCAAATCACAGGATTATACTGTGAGATGCTGGGCGTG---CTATCAGA---------G------------------A--GT--GTGA----------AAG-GAACCCA-----AGTGTATSizeHit CountTotal NormTotalV111
Male-body		V042
Embryo		V050
Head		V057
Head		M021
Embryo		M042
Female-body
..........................................................................................................................................................................AATCACAGGATTATACTGT..................................................................................................1911558.001558410034106126846
...................................................................................................................................CGCAGTATATTTTTGTGTTTTG......................................................................................................................................2211235.00123543919526314840150
..........................................................................................................................................................................AATCACAGGATTATACTGTGA................................................................................................211410.00410435561208187
..........................................................................................................................................................................AATCACAGGATTATACTG...................................................................................................181236.0023600472250
...................................................................................................................................CGCAGTATATTTTTGTGTTTT.......................................................................................................................................21149.00492247709
...................................................................................................................................CGCAGTATATTTTTGTGTTT........................................................................................................................................20130.00301347204
..........................................................................................................................................................................AATCACAGGATTATACTGTGAG...............................................................................................22129.00290235019
..........................................................................................................................................................................AATCACAGGATTATACTGTG.................................................................................................20127.00270083016
...................................................................................................................................CGCAGTATATTTTTGTGTT.........................................................................................................................................19125.00259130102
....................................................................................................................................GCAGTATATTTTTGTGTTTTG......................................................................................................................................21118.0018631107
...........................................................................................................................................................................ATCACAGGATTATACTGT..................................................................................................18111.0011000083
...........................................................................................................................................................................ATCACAGGATTATACTGTGA................................................................................................20110.00100000010
.............................................................................................................................................................................CACAGGATTATACTGTGAG...............................................................................................1913.003000003
...........................................................................................................................................................................ATCACAGGATTATACTGTGAG...............................................................................................2113.003000003
.........................................................................................................................................................................AAATCACAGGATTATACTGTGA................................................................................................2213.003000003
...............................................................................................................................................................................CAGGATTATACTGTGAGA..............................................................................................1812.002000011
...................................................................................................................................CGCAGTATATTTTTGTGTTTTGT.....................................................................................................................................2312.002000101
...................................................................................................................................CGCAGTATATTTTTGTGT..........................................................................................................................................1812.002020000
..........................................................................................................................................................................AATCACAGGATTATACTGTGAGA..............................................................................................2312.002000002
.........................................................................................................................................................................AAATCACAGGATTATACTGTG.................................................................................................2111.001000001
...................................................................................................................................CGCAGTATATTTTTGTGTTTTGTTG...................................................................................................................................2511.001001000
............................................................................................................................................................................TCACAGGATTATACTGTGAGA..............................................................................................2111.001000001
....................................................................................................................................................................AACGCAAATCACAGGATTATAC.....................................................................................................2211.001000001
........................................................................................................................................................GTTGT-GTCTGAAACGCAAA...................................................................................................................1911.001100000
...........................................................................................................................................................................ATCACAGGATTATACTGTG.................................................................................................1911.001000001
.............................................................................................................................................................................CACAGGATTATACTGTGA................................................................................................1811.001000001
................................................................................................................................................................................................ATGCTGGGCGTG---CTATCAGA---------G------------------A--GT--GTGA----------.......................2811.001100000
.......................................................................................................................................GTATATTTTTGTGTTTTG......................................................................................................................................1811.001100000
....................................................................................................................................GCAGTATATTTTTGTGTTTT.......................................................................................................................................2011.001000001
...........................................................................................................................................................................ATCACAGGATTATACTGTGAGA..............................................................................................2211.001000001
......................................................................................................................................AGTATATTTTTGTGTTTTG......................................................................................................................................1911.001010000
.........................................................................................................................................................................AAATCACAGGATTATACTGTGAGA..............................................................................................2411.001000001
.....................................................................................................................................CAGTATATTTTTGTGTTTTG......................................................................................................................................2011.001000001
droWil2
CACCAA--------C---------ATGCTG-----------------------------------------GATACTG--ATTAAGGCTCT-----CGTC-G-AC--C---ACAGACTATTCTTG-CGTCTCGCAGTATATTTTTGTGTTTTGTTCAATTTGTCAACTCAAATCACAGGATTATACTGTGAGCTGCGAAATGGA---A-ATCCAC---------GCA---------------ACCATTT--TA-----AAATCAAATTG-ACTTA-------AATGTSizeHit CountTotal NormTotalV117
Male-body		V118
Embryo		V119
Head		M020
Head		M045
Female-body
...................................................................................................................................CGCAGTATATTTTTGTGTTTTG......................................................................................................................................2215015.00501562399975046158
..........................................................................................................................................................................AATCACAGGATTATACTGTGA................................................................................................211981.00981426414249522
..........................................................................................................................................................................AATCACAGGATTATACTGT..................................................................................................191782.007824817862317177
..........................................................................................................................................................................AATCACAGGATTATACTG...................................................................................................181202.0020201421806
...................................................................................................................................CGCAGTATATTTTTGTGTTTT.......................................................................................................................................211201.0020101514208
..........................................................................................................................................................................AATCACAGGATTATACTGTGAG...............................................................................................221162.0016203450123
..........................................................................................................................................................................AATCACAGGATTATACTGTG.................................................................................................20166.00660415344
....................................................................................................................................GCAGTATATTTTTGTGTTTTG......................................................................................................................................21145.00450227016
...........................................................................................................................................................................ATCACAGGATTATACTGTGA................................................................................................20131.0031000031
...................................................................................................................................CGCAGTATATTTTTGTGTT.........................................................................................................................................19119.0019015400
...........................................................................................................................................................................ATCACAGGATTATACTGT..................................................................................................18116.0016000016
...................................................................................................................................CGCAGTATATTTTTGTGTTTTGT.....................................................................................................................................23114.001407124
...........................................................................................................................................................................ATCACAGGATTATACTGTGAG...............................................................................................21111.0011000011
...................................................................................................................................CGCAGTATATTTTTGTGTTT........................................................................................................................................20110.001009100
..............................................................................................................................................................................ACAGGATTATACTGTGAG...............................................................................................1819.00902106
.............................................................................................................................................................................CACAGGATTATACTGTGAG...............................................................................................1917.00701204
.........................................................................................................................................................................AAATCACAGGATTATACTGTGA................................................................................................2216.00603003
.......................................................................................................................................GTATATTTTTGTGTTTTG......................................................................................................................................1815.00503002
......................................................................................................................................AGTATATTTTTGTGTTTTG......................................................................................................................................1915.00502003
.....................................................................................................................................CAGTATATTTTTGTGTTTTG......................................................................................................................................2014.00402101
...........................................................................................................C---ACAGACTATTCTTG-CGTCT............................................................................................................................................................2014.00404000
....................................................................................................................................GCAGTATATTTTTGTGTTTT.......................................................................................................................................2014.00401201
...................................................................................................................................CGCAGTATATTTTTGTGT..........................................................................................................................................1814.00404000
...................................................................................................................................CGCAGTATATTTTTGTGTTTTGTT....................................................................................................................................2413.00303000
..................................................................................................TC-G-AC--C---ACAGACTATTCTTG-CGT..............................................................................................................................................................2312.00200200
.......................................................................................................AC--C---ACAGACTATTCTTG-CGTCT............................................................................................................................................................2212.00202000
.........................................................................................................................................................TTCAATTTGTCAACTCAAATCACAGGATT.........................................................................................................2911.00100010
................................................................................................................................................................TGTCAACTCAAATCACAGGATTATACT....................................................................................................2711.00100001
.........................................................................................................................................................................AAATCACAGGATTATACTGTG.................................................................................................2111.00100001
...................................................................................................................................CGCAGTATATTTTTGTGTTTTGTTCAATT...............................................................................................................................2911.00100001
................................................................................................................................................................TGTCAACTCAAATCACAGGATT.........................................................................................................2211.00100001
.........................................................................................................................................................................AAATCACAGGATTATACTGT..................................................................................................2011.00100001
............................................................................................................................................................................TCACAGGATTATACTGTGAG...............................................................................................2011.00100001
...........................................................................................................................................................................ATCACAGGATTATACTGTG.................................................................................................1911.00100001
droVir3
TTATTT--------A----TT-TATTGTTA--------------------T--------------TT---TAATTT-G--TA----------------------GCCAA-CGC------A-TTCGATGTCTCGCAGTATACTTTTGTGTTTTGTTTA-TTTTGAAAATCAAATCACAGGATTATACTGTGAGTTATCGGCTGTA---GCAACAAC---------AAA---------------AA--TCCATTTT---AGACACAAA-------GC-----TTTATATSizeHit CountTotal NormTotalV116
Male-body		V053
Head		V047
Embryo		M027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis
....................................................................................................................................CGCAGTATACTTTTGTGTTTTG.....................................................................................................................................22110834.00108342511223014469109367362113271291684280209619711977469945333435117232726585133311794463601423931872219626632421420297
...........................................................................................................................................................................AATCACAGGATTATACTGTGA...............................................................................................2116396.00639669929631325214186545113401033916611017178832216346137047236138793594167269143113512870
...........................................................................................................................................................................AATCACAGGATTATACTGTGAG..............................................................................................2211631.0016311300019703120801102088533650261914690510851252204411414213364410142371011
...........................................................................................................................................................................AATCACAGGATTATACTGT.................................................................................................1911094.0010942111633493261354496103139130023315314592615132332141427593131653737
...........................................................................................................................................................................AATCACAGGATTATACTGTGAGT.............................................................................................231562.0056203000703031104000322815166130242764020937853381601144231487
....................................................................................................................................CGCAGTATACTTTTGTGTTTT......................................................................................................................................211486.0048694300630735041313107561155110121243158411422724213818221130
...........................................................................................................................................................................AATCACAGGATTATACTGTG................................................................................................201467.004671100062870010010000021881251201718173102651240245224
...........................................................................................................................................................................AATCACAGGATTATACTG..................................................................................................181239.002390014714015100000000010001130213123161413141121
............................................................................................................................................................................ATCACAGGATTATACTGTGAGT.............................................................................................221204.002042100012230200010006302121247910342410109072617861
............................................................................................................................................................................ATCACAGGATTATACTGTGA...............................................................................................201191.00191000001890000010000000000000000001000000000000
.....................................................................................................................................GCAGTATACTTTTGTGTTTTG.....................................................................................................................................211154.00154103001000043020011311001000004287310210020021
...............................................................................................................................................................................ACAGGATTATACTGTGAG..............................................................................................18197.0097010000010101000006143143441190169100130422041
....................................................................................................................................CGCAGTATACTTTTGTGTTTTGT....................................................................................................................................23187.008710001139330000000110401001361108332341222152
..........................................................................................................................................................................AAATCACAGGATTATACTGTGA...............................................................................................22172.007200000416000000000021101200302341000010021100
...................................................................................................................................TCGCAGTATACTTTTGTGTTTT......................................................................................................................................22164.006400000800000000002141200012121611130810241200
.........................................................................................................GCCA-ACG------C-ATTCGATGTCT...........................................................................................................................................................19152.005203000600040200000001000000271134111300101001
........................................................................................................................................GTATACTTTTGTGTTTTG.....................................................................................................................................18150.005000000401212173701110000010011221000000000020
....................................................................................................................................CGCAGTATACTTTTGTGT.........................................................................................................................................18136.00360010010429000100000000000091100100001000041
....................................................................................................................................CGCAGTATACTTTTGTGTTT.......................................................................................................................................20132.00322100040021000000011000210000023330000121002
............................................................................................................................................................................ATCACAGGATTATACTGTG................................................................................................19124.002400000240000000000000000000000000000000000000
...................................................................................................................................TCGCAGTATACTTTTGTGTTTTG.....................................................................................................................................23124.00241100021011000000000000000100133031010002011
..........................................................................................................................................................................AAATCACAGGATTATACTGTGAG..............................................................................................23123.00230000060000000000011100000000041000040211100
......................................................................................................................................CAGTATACTTTTGTGTTTTG.....................................................................................................................................20117.00170000090000010000000000000000021000100003000
....................................................................................................................................CGCAGTATACTTTTGTGTT........................................................................................................................................19116.00160020051000000000010010000110010010000100100
.....................................................................................................................................GCAGTATACTTTTGTGTTTT......................................................................................................................................20116.00160000090010000000000010000000001000101002000
............................................................................................................................................................................ATCACAGGATTATACTGTGAG..............................................................................................21116.001600000130000000000000010000000000000001001000
.......................................................................................................................................AGTATACTTTTGTGTTTTG.....................................................................................................................................19114.00140100071001100000000000000002000000000001000
..............................................................................................................................................................................CACAGGATTATACTGTGAG..............................................................................................19114.00140000050000000000000300000004101000000000000
............................................................................................................................................................................ATCACAGGATTATACTGT.................................................................................................18111.001100000110000000000000000000000000000000000000
.............................................................................................................................................................................TCACAGGATTATACTGTGA...............................................................................................19110.001000000100000000000000000000000000000000000000
...................................................................................................................................TCGCAGTATACTTTTGTGTTT.......................................................................................................................................2117.0070000000020000000000000000000010012100000000
...............................................................................................................................................................................ACAGGATTATACTGTGAGT.............................................................................................1916.0060000000000000000000000000100101000010010100
........................................................................................................AGCCA-ACG------C-ATTCGATGTCT...........................................................................................................................................................2016.0060000000000000000000000000001032000000000000
..........................................................................................................................................................................AAATCACAGGATTATACTGTG................................................................................................2115.0050000050000000000000000000000000000000000000
.............................................................................................................................................................................TCACAGGATTATACTGTGAG..............................................................................................2015.0050000050000000000000000000000000000000000000
..............................................................................................................................................................................CACAGGATTATACTGTGA...............................................................................................1813.0030000120000000000000000000000000000000000000
....................................................................................................................................CGCAGTATACTTTTGTGTTTTGTT...................................................................................................................................2413.0030000000000000000000000000001001001000000000
..........................................................................................................................................................................AAATCACAGGATTATACTGTGAGT.............................................................................................2413.0030000000000000000000000000001001000010000000
........................................................................................................................................................................TCAAATCACAGGATTATACTGT.................................................................................................2212.0020000000000000000000000100000001000000000000
........................................................................................................................................................................TCAAATCACAGGATTATACTG..................................................................................................2112.0020000100000000000000000000000000001000000000
.............................................................................................................................................................................TCACAGGATTATACTGTGAGT.............................................................................................2112.0020000020000000000000000000000000000000000000
.............................................................................................................................................................................TCACAGGATTATACTGTG................................................................................................1812.0020000020000000000000000000000000000000000000
....................................................................................................................................CGCAGTATACTTTTGTGTTTTGTTT-AT...............................................................................................................................2712.0020000000000000000000000000000000001000000100
.....................................................................................................................................GCAGTATACTTTTGTGTTT.......................................................................................................................................1911.0010000010000000000000000000000000000000000000
....................................................................................................................................CGCAGTATACTTTTGTGTTTTGTTT-.................................................................................................................................2511.0010000000000000000000000000000010000000000000
.................................................................................................................................................................................AGGATTATACTGTGAGTT............................................................................................1811.0010000001000000000000000000000000000000000000
.............................................................................T--GT----------------------AGCCA-ACG------C-ATTCGATGTCT...........................................................................................................................................................2311.0010000000000000000000000000001000000000000000
droMoj3
TTTATT---------C---TAAATTTGTTA--------------------A--------------GATTTTAATTTGA--------ATTATTT--------G-AA--C---AC------A-TTCGATGTCTCGCAGTATATTTTTGTGTTTTGTTTA-TTATAAAAATCAAATCACAGGATTATACTGTGAGTTATCGGCTGAA---ACAACAAC---------AAA---------------TT----GAATTA----AAATCATCT-GCTAGCT-----ATCATATSizeHit CountTotal NormTotalV110
Male-body		V056
Head		V049
Head		V041
Embryo		M046
Female-body		M060
Embryo
...........................................................................................................................................................................AATCACAGGATTATACTGTGA...............................................................................................2115405.005405261168116326042415
....................................................................................................................................CGCAGTATATTTTTGTGTTTTG.....................................................................................................................................2211392.00139241216711938825353
...........................................................................................................................................................................AATCACAGGATTATACTGT.................................................................................................191950.00950819484466720
...........................................................................................................................................................................AATCACAGGATTATACTGTG................................................................................................201201.0020100731829
...........................................................................................................................................................................AATCACAGGATTATACTGTGAG..............................................................................................221179.00179231213635
............................................................................................................................................................................ATCACAGGATTATACTGTGA...............................................................................................201127.0012700001252
............................................................................................................................................................................ATCACAGGATTATACTGT.................................................................................................18140.00400000400
..........................................................................................................................................................................AAATCACAGGATTATACTGTGA...............................................................................................22137.00370000829
.....................................................................................................................................GCAGTATATTTTTGTGTTTTG.....................................................................................................................................21132.00325002241
....................................................................................................................................CGCAGTATATTTTTGTGTTTT......................................................................................................................................21120.0020115841
............................................................................................................................................................................ATCACAGGATTATACTGTGAGT.............................................................................................22118.00180001125
...........................................................................................................................................................................AATCACAGGATTATACTG..................................................................................................18116.00160410110
....................................................................................................................................CGCAGTATATTTTTGTGTTT.......................................................................................................................................20111.0011402131
..............................................................................................................................................................................CACAGGATTATACTGTGAG..............................................................................................1919.009000090
.............................................................................................................................................................................TCACAGGATTATACTGTGA...............................................................................................1919.009000090
...........................................................................................................................................................................AATCACAGGATTATACTGTGAGT.............................................................................................2318.008010061
....................................................................................................................................CGCAGTATATTTTTGTGTT........................................................................................................................................1918.008520010
............................................................................................................................................................................ATCACAGGATTATACTGTG................................................................................................1917.007000070
.............................................................................................................................................................................TCACAGGATTATACTGTGAG..............................................................................................2017.007000070
...............................................................................................................................................................................ACAGGATTATACTGTGAG..............................................................................................1815.005000050
....................................................................................................................................CGCAGTATATTTTTGTGTTTTGT....................................................................................................................................2315.005200210
............................................................................................................................................................................ATCACAGGATTATACTGTGAG..............................................................................................2114.004000040
......................................................................................................................................CAGTATATTTTTGTGTTTTG.....................................................................................................................................2014.004000031
....................................................................................................................................CGCAGTATATTTTTGTGT.........................................................................................................................................1813.003111000
..............................................................................................................................................................................CACAGGATTATACTGTGA...............................................................................................1813.003000030
.......................................................................................................................................................................ATCAAATCACAGGATTATACTGTGA...............................................................................................2512.002000002
...................................................................................................................................TCGCAGTATATTTTTGTGTTTT......................................................................................................................................2212.002001010
........................................................................................................................................GTATATTTTTGTGTTTTG.....................................................................................................................................1812.002100010
....................................................................................................................................CGCAGTATATTTTTGTGTTTTGTT...................................................................................................................................2411.001000010
................................................................................................................................................................................CAGGATTATACTGTGAGT.............................................................................................1811.001000010
..........................................................................................................................................................................AAATCACAGGATTATACTGTGAG..............................................................................................2311.001000010
.............................................................................................................................................................................TCACAGGATTATACTGTGAGT.............................................................................................2111.001000010
..........................................................................................................................................................................AAATCACAGGATTATACTGT.................................................................................................2011.001000010
.................................................................................................................................................................................AGGATTATACTGTGAGTT............................................................................................1811.001000010
.....................................................................................................T-GA--A---CA------C-ATTCGATGTCT...........................................................................................................................................................1811.001000001
.....................................................................................................................................GCAGTATATTTTTGTGTTTTGTTT-.................................................................................................................................2411.001000010
.............................................................................................................................................................................TCACAGGATTATACTGTG................................................................................................1811.001000010
.....................................................................................................................................GCAGTATATTTTTGTGTTTT......................................................................................................................................2011.001000010
............................................................................................T--------T-GA--A---CA------C-ATTCGATGTCT...........................................................................................................................................................1911.001000001
......................................................................................AATTATT--------T-GA--A---CA------C-ATTCGATGTCT...........................................................................................................................................................2511.001000001
...................................................................................................................................TCGCAGTATATTTTTGTGTTTTG.....................................................................................................................................2311.001000010
.....................................................................................................................................GCAGTATATTTTTGTGTTT.......................................................................................................................................1911.001000010
...........................................................................................TT--------T-GA--A---CA------C-ATTCGATGTCT...........................................................................................................................................................2011.001000001
.......................................................................................................................................AGTATATTTTTGTGTTTTG.....................................................................................................................................1911.001000010
.........................................................................................................................................................................CAAATCACAGGATTATACTGTGA...............................................................................................2311.001000001
...................................................................................................................................TCGCAGTATATTTTTGTGTTT.......................................................................................................................................2111.001000100
droGri2
CATTAT---------T---TAGAAGTGTTTTCAATTTGATATACATATATAGATAGATCTGTTAAG---------------------------------------CCCACCAC-------TGTCGATGTCTCGCAGTATATTTTTGTGTTTTGTTTATTTTTGAAAATCAAATCACAGGATTATACTGTGAGTTATC------G---CCAGCAGCAAGGACAACCAAATTTTAATTTACCCAAA--------------------TAC-AATTACA-----CAAATATSizeHit CountTotal NormTotalV109
Male-body		M041
Female-body
..........................................................................................................................................................................AATCACAGGATTATACTGTGA................................................................................................211155.001552153
...................................................................................................................................CGCAGTATATTTTTGTGTTTTG......................................................................................................................................221142.001428161
..........................................................................................................................................................................AATCACAGGATTATACTGTG.................................................................................................20120.0020020
..........................................................................................................................................................................AATCACAGGATTATACTGT..................................................................................................19119.0019514
....................................................................................................................................GCAGTATATTTTTGTGTTTTG......................................................................................................................................2119.00918
...........................................................................................................................................................................ATCACAGGATTATACTGTGA................................................................................................2017.00707
...................................................................................................................................CGCAGTATATTTTTGTGTTTT.......................................................................................................................................2117.00734
..........................................................................................................................................................................AATCACAGGATTATACTGTGAG...............................................................................................2213.00303
..........................................................................................................................................................................AATCACAGGATTATACTG...................................................................................................1813.00303
....................................................................................................................................GCAGTATATTTTTGTGTTTT.......................................................................................................................................2013.00303
.........................................................................................................CCCACCAC-------TGTCGATGTCT............................................................................................................................................................1911.00101
...........................................................................................................................................................................ATCACAGGATTATACTGTG.................................................................................................1911.00101
.........................................................................................................................................................................AAATCACAGGATTATACTGTGA................................................................................................2211.00101
...........................................................................................................................................................................ATCACAGGATTATACTGT..................................................................................................1811.00101
...........................................................................................................................................................................ATCACAGGATTATACTGTGAGT..............................................................................................2211.00101
..............................................................................................................................................................................ACAGGATTATACTGTGAG...............................................................................................1811.00101
...........................................................................................................................................................................ATCACAGGATTATACTGTGAG...............................................................................................2111.00101
......................................................................................................................................AGTATATTTTTGTGTTTTG......................................................................................................................................1911.00101
.......................................................................................................................................GTATATTTTTGTGTTTTG......................................................................................................................................1820.50101

Generated: 12/06/2013 at 02:38 PM