ID:

dsi-mir-2577

 Coordinate:

2L:14256237-14256350 -

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-48.0 -48.0 -48.0

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CAGTTCAGTTCGGTTGGGTTGAGCTGAGCTGAGTTGAGTTCAGTTCTGTTCAGTTCGGTTCATGGGGATGGCGTTGGTCGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACCCCAATTTTACAATTCCAGGACCGATCCGATCCCCAGGAATCGACTGTCCGCTGTCGGGCGGACTGCCAATTACACTTTTTGACGCCGAGCACAATGT
**********************************************....((((.((((((.(((((((((.(((((((.((.((.((((((((((((.(((....))).))))))....)))...))).)).))))))))))).))))))).)))))))))).......******************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 GSM343915
embryo
 M023
head
 SRR553487
Ovary		 M024
male body
 O001
Testis
 SRR553488
Ovary		 SRR618934
Ovary
.....................................................................................................................................AGGACCGATCCGATCCCCAGGA........................................................... 22 0 1 87.00 87 65 16 6 0 0 0 0 0
....................................................................................................................................CAGGACCGATCCGATCCCCAGGA........................................................... 23 0 1 67.00 67 51 2 13 0 1 0 0 0
....................................................................................................................................CAGGACCGATCCGATCCCCAGGG........................................................... 23 1 1 13.00 13 13 0 0 0 0 0 0 0
.....................................................................................................................................AGGACCGATCCGATCCCCAGGG........................................................... 22 1 1 11.00 11 10 0 1 0 0 0 0 0
.....................................................................................................................................AGGACCGATCCGATCCCCAGG............................................................ 21 0 1 10.00 10 1 6 3 0 0 0 0 0
.....................................................................................................................................AGGACCGATCCGATCCCCAGGAA.......................................................... 23 0 1 7.00 7 5 0 2 0 0 0 0 0
....................................................................................................................................CAGGACCGATCCGATCCCCAGG............................................................ 22 0 1 5.00 5 3 1 0 0 0 0 1 0
....................................................................................................................................CAGGACCGATCCGATCCCCAGGAA.......................................................... 24 0 1 2.00 2 1 0 0 1 0 0 0 0
....................................................................................................................................CGGGACCGATCCGATCCCCAGGA........................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0 0
....................................................................................................................................CGGGACCGATCCGATCCCCAGG............................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................................GATCCGATCCCCAGG............................................................ 15 0 1 1.00 1 0 0 0 0 0 0 0 1
.....................................................................................................................................AGGACCGATCCGACCCCCAGGA........................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0
....................................................................................................................................CAGGACCGATCCGATCCCC............................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................CAGGACCGATCCTATCCCCAGG............................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................................AGGACCGATCCGATCCCCCGG............................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0
.............................................................ATGGGGATGGCGTTGGTCGCTTG.................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................................................AGGAACGATCCGATCCCCAGGA........................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0
.............................................................ATGGGGATGGCGTTGGTTGCTTG.................................................................................................................................. 23 1 1 1.00 1 0 1 0 0 0 0 0 0
.................................................................................................................CACCCCAATTTTACAATT................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0
....................................................................................................................................CAGGACCGATCCGATCCCCAGGC........................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0 0
.....................................................................................................................................AGGACCGATCCAATCCCCAGGA........................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................ATGGGGATGGCGTTGGTCGCTTGA................................................................................................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0
.............................................................ATGGGGATGGCGTTGGTCGATT................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................................................AGGACCGATCCGATCCCCGTGG........................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0
.....................................................................................................................................TAGACCGATCCGATCCCCGGGA........................................................... 22 3 3 0.33 1 0 1 0 0 0 0 0 0
................................................TTCTGTTCGGTTCATG...................................................................................................................................................... 16 1 3 0.33 1 0 0 0 0 0 0 0 1
......................................................................GCCTTGGTCGCTTGCCTT.............................................................................................................................. 18 2 4 0.25 1 0 0 0 1 0 0 0 0
....................................................................................................................................................CCCGCGAATCGACTGTCCGG.............................................. 20 3 4 0.25 1 0 1 0 0 0 0 0 0
............................................................................................................................TACAATTCCCGGACC........................................................................... 15 1 4 0.25 1 0 0 0 1 0 0 0 0
........................................................................................GAGTGAGTACTCCGACAGT........................................................................................................... 19 3 6 0.17 1 0 0 0 0 0 0 0 0
...........................................................................................TGTGTAGGCCGACATTCGGT....................................................................................................... 20 3 7 0.14 1 0 0 0 0 0 0 0 0
.....................................................................GGCGTTGGTTGCTTGTC................................................................................................................................ 17 2 15 0.13 2 0 0 0 0 0 0 0 2
..............................................................TGGGGATAGCGTCGGTCCC..................................................................................................................................... 19 3 8 0.13 1 1 0 0 0 0 0 0 0
....................................................................TGGTGTTGGTCGCTTGGCT............................................................................................................................... 19 2 8 0.13 1 0 0 0 0 0 0 0 1
.....................................................................GGCGTTGGTTGCTTGCCT............................................................................................................................... 18 2 9 0.11 1 0 0 0 0 0 0 0 1
......................................................................ACGTTGGTCGTTTGACTGGA............................................................................................................................ 20 3 10 0.10 1 1 0 0 0 0 0 0 0
.....................................................................GGCCTTGGTCGCTTGCC................................................................................................................................ 17 2 12 0.08 1 0 0 0 1 0 0 0 0
.........................................................................................................................TTTTACGATTATAGGACCG.......................................................................... 19 3 13 0.08 1 0 0 0 0 0 0 1 0
..................................................................................................................................................ATCCCAAGAATCGACTGTC................................................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0

Anti-sense strand reads

ACATTGTGCTCGGCGTCAAAAAGTGTAATTGGCAGTCCGCCCGACAGCGGACAGTCGATTCCTGGGGATCGGATCGGTCCTGGAATTGTAAAATTGGGGTGTAACCCACTGTCGGCTTACACACTCAAGTCAAGCGACCAACGCCATCCCCATGAACCGAACTGAACAGAACTGAACTCAACTCAGCTCAGCTCAACCCAACCGAACTGAACTG
********************************************.......((((((((((.(((((((.(((((((((((.((.(((...(((....((((((.(((....))).)))))))))))).)).)).))))))).))))))))).)))))).))))....********************************************** 		Read size # Mismatch Hit Count Total Norm Total
....................................................................................................................................................CCCAGGAACCGAGCTGAAC............................................... 19 2 2 0.50 1
.................................AGCCCGTCCGACAGCG..................................................................................................................................................................... 16 2 14 0.14 2
....................................................................................................................TTACACATTCAAGTCGAG................................................................................ 18 2 8 0.13 1
............................................................................................................CTGTCGGAGTACTCACTCA....................................................................................... 19 3 14 0.07 1
....TGTGATCGGCATCAAAAA................................................................................................................................................................................................ 18 2 20 0.05 1
.............................................................................TCCTGGAATTTTAAA.......................................................................................................................... 15 1 20 0.05 1
...................................................................................AATAGTAAAATTGGG.................................................................................................................... 15 1 20 0.05 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 2L:14256187-14256400 - dsi-mir-2577 C-AGTTCAGTTCGGTTGGGTTG---AG---------------------------------------------------------------------------------------CTGAGCTGAGTT----------------------------------------------------------------------------------GA-------GTTCA------------------------------------GTTCTGTTCAGTTCGGTT-CA-------------TGG-GGATGGCGTTGGTCGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACCCCAATTT---------------------------------------------------------------------------------TACAATTCCAGGACCGATC-----------CGATCCCCAGGAATCGA-------------------------------------------------------------CTGTCCG-CT-GTCGGGCGGA-CTGCCAATTACACTTTTTGACGCCGAGCA-CAATGT
droSec2 scaffold_3:771865-772073 - C-AGTTC-----GGTTGGGTTG---AGC---------------------------------------------------------------------------------------TGAGCTGAGTT----------------------------------------------------------------------------------GA-------GTTCA------------------------------------GTTCTGTTCAGTTCGGTT-GA-------------TGG-GGATGGCGTTGGTCGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACCCCAATTT---------------------------------------------------------------------------------TACAATTCCAGGACCGATC-----------CGATCCCCAGGAATCGA-------------------------------------------------------------CTGTCCG-CT-GTCGGGCGGA-CTGCCAATTACACTTTTTGACGCCGAGCA-CAATGT
dm3 chr2L:14508658-14508866 - C-AGTTCAGTTCGGTTGGGTTG---AG---------------------------------------------------------------------------------------CTGAGCTGAGTT----------------------------------------------------------------------------------GA-------GTTGA------------------------------------G-----TTCAGTTCGGTT-GA-------------TGG-GGATGGCGTTGGTCGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACCCCAATTT---------------------------------------------------------------------------------TACAATTCCAGGACCGATC-----------CGATCCCCAGGAATCGA-------------------------------------------------------------CTGTCCA-CT-GTCGGGCGGA-CTGCCAATTACACTTTTTGACGCCGAGCA-CAATGT
droEre2 scaffold_4929:6262855-6263092 - C-AGTTCAGTT-----CAGTTC---AGTTCAGTTC-------------------------------------------------------------------GGTTCGGTT-------------------------------------------------------------------------------------------------CG-------GTTCAGCTGGGTTGGATTG------GCTTGGACTGGGTTGAGCGGAGTTCA-------------------GCTGTTGG-GGATGGCGTTGGTCGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACCCCAATTT---------------------------------------------------------------------------------TACAATTCCAGGACCGATC-----------CGATGC-CAGGCATCGA-------------------------------------------------------------CTGTCCG-CT-GTCGGGCGGA-CTGCCAATTACACATTTTGACGCCGAGCA-CAATGT
droYak3 2L:14617624-14617872 - C-AGTTCAGTT-----CAGCTT---GGTTTGGTTG-------------------------------------------------------------------GGTTGAG-----CTGAGTTGAGTT----------------------------------------------------------------------------------GA-------GT--------------------------TGATCTGAGTTCAGTTCAGTTCAGTTAGGTTATGTTGGTGAGGCTGATGGGGGATGGCGTTGGTCGCTTGACTCGAGTGTGTAAGCCGACAGTGGGTTACACCCCAATTT---------------------------------------------------------------------------------TACAATTCCAGGACCGATG-----------CGATCCCCAGGAATCGA-------------------------------------------------------------CTGTCCG-CT-GTCGGGCGGA-CTGCCAATTACACATTTTGACGCCGAGCA-CAATGT
droEug1 scf7180000409452:1074006-1074173 - C-AGTTGAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA------------------------------GTTCGGTTGGTCGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACCCCAATTCCA----------------CAATTCCA---------------------------------------------------------CATTTCCAGGTCCGATC-----------AGAGCCACAGGAATCGA-------------------------------------------------------------CTGTCCGCCT-GTCGGGCGGG-CTGCCAATTACACTTTTTGACGCCGAGCA-CAATGT
droBia1 scf7180000302408:2046056-2046220 + C-TGTTC-----GCTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCGGCCGCTTGACTCGAGTGTGTAAGCCGACAGTGGGTTACACCCCAATTCAA----------------CAATTCCA---------------------------------------------------------CAATGCCAGGACCGATC-----------CGATCCACAGGAATCGA------------------------------------------CTGTCGACCGGC-G----ACTGTCCG-CT-GTCGGACGGA-CTGCCAATTACACTTTTTGACGCT------------
droTak1 scf7180000415399:736271-736446 + C-G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGGTCGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACCCCAATTCCA----------------CAGTTCTA---------------------------------CAGTTCTACGTTTCCACAGCTCTACAGTTCCAGGACCGATC-----------CGATCCACAGGAATCGA-------------------------------------------------------------CTGTCCG-CT-GTCGGGCGGA-CTGCCAATTACACTTTTTGACGCCGAGCA-CAATGT
droEle1 scf7180000491046:942103-942254 - T----TCAGTT-----CAGATAGAGAGA-GAGCCGGG------------------------------------------------------------------------------------------------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------CCGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACCCCGATT-----------------------------------------------------------------------------------GCGATTCCAGGTCCG---------------GATCCACAGGAATCGA-------------------------------------------------------------CTGA----CT-GT----CGGG-CTGCCAATTACACTTTTTGACGCCGAGCA-CGATG-
droRho1 scf7180000780078:27625-27864 - C-AG---------------------AGA-GAGCCGGGTCCGGACTTGGGTTTTGGTATGGGTTTTGGTATGAGTTTGGGTATGAGTTTTGGGC-------------------------------------------------------------------------------TT----------------------------------GG-------GT----------------------------------------------TCG--------------------------------TCGGTCAGACGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACCCCGATTCCGATTC------------CAATTCCG---------------------------------AA--------------------TCCGATTCCAGGGCCG---------------GATCCACAGGAATCGA---------------------------------------------C----CGGCTG----ACTGTCCG-CT-GTCGGGCGGG-CTGCCAATTACACTTTTTGACGCCGAGCA-CA----
droFic1 scf7180000453843:263124-263331 + C-AGA-------------GAGA---GAA-GAGCCGGG------------------------------------------------------------------------------------------------------------------------------------TTTTCTGTCGGTCGGCTGGTCGT-----------T---TGGTCGGTGGG-TCG--------------TTTGTTGGTT---------------------------------------------------GG-TCCGCAGGACGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACCCCAATTC----------------------------------------------------------------------------------GCAATTCCAGGACC----------------GATCCACAGGAATCGA-------------------------------------------------------------CTGTCCG-CT-GTCGGGCGGG-CTGCCAATTACACTTTTTGACGCCGAGCA-CAATAC
droKik1 scf7180000302473:885966-886147 - CCAGCTC-----GCTTGAGCTC---AGA-GAGCCGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGCTCGGACGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACCCCGATTTCGAGTC------------CTGTTCCAAGTCCGACTC-----------------------------------------------CGAT-----------TCCGATCCCGAACCAATCCACAG-----------------------------------------------------------------------TC----G-GGCGGGCGGG-CTGCCAATTACACTTTCTGACGCCGAGCA-CAATGT
droAna3 scaffold_12916:1310203-1310426 + C-AGCTC-----GCTTGAGTTC---AGA-GAGCCGGG------------------------------------------------------------------------------------------------------------------------------------TTCTC----------------------------------GG-------G---------------------------------------------------------------------------------TTCGGTTGGACGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACCCCAGTTCC-----------------CT------------GCTCCGATCCCGTCCTCGTTCCCATTTCCG-TTAACGTTTCC-----TTTCCCATCCCTGATCC----------CAATTCAATCCACAGG-----A-------------------------------------------------------------CTGTCCG-CC-ATCGGACGGT-CTGCCAATTACACTTTTTGACGCCGAGCA-CAATGT
droBip1 scf7180000396554:946575-946795 - C-AGCTC-----GCTTGAGTTC---AGA-GAGCCGGG------------------------------------------------------------------------------------------------------------------------------------TTCTC----------------------------------GG-------G---------------------------------------------------------------------------------TTCGGTTGGACGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACACCAGTTTGCCG--GCTTCCTGCCCCCT------------GCTCCG------------------TTTACG-TTTACGTTTCC-----TTTCCCATTCCTGATCC----------CAATTCAATCCACAGG-----A-------------------------------------------------------------CTGCCCG-CC-ATCGGGCGGT-CTGCCAATTACACTTTTTGACGCCGAGCA-CAATGT
dp5 4_group1:3353981-3354211 + T-TG---GGTT-----TGGGT-----------------------------------------------------------------TTTGGGTTGAGGTTCAGGTTCGCTTCAGTAGAGCTGAGTGGAGAGTTGCTGTGGTGCGGTGCGGCGGTGGAGTGAAGTGGAAGTTT---------------------------------------------------------------------------------------------TCG------------------------------GTTCGGTTGGACGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTATATTCGTACTT-----------------------------------------------------------------------------------GTATTCGATAAAG----------------GATCC-C------------------------------------------------------------------------GGCAA-CT-GACGGGCGGGTTTGCCAATTACACTTTTTGACGCCGTGCGGCAGTG-
droPer2 scaffold_5:1869194-1869391 - C-GCTTCAGTA-----GAGATG---AGTGGAG-------------------------------------------------------------------------------------------------AGTTGCTGTGGTGCGCTGTGGCGGTGGAGTGAAGTGGAAGTTT---------------------------------------------------------------------------------------------TCG------------------------------GTTCGGTTGGACGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTATATTCGTACTT-----------------------------------------------------------------------------------GTATTCGATAAAG----------------GATCC-C------------------------------------------------------------------------GGCAA-CT-GACGGGCGGGTTTGCCAATTACACTTTTTGACGCCGTGCGGCAGTG-
droWil2 scf2_1100000004577:2827268-2827508 + T-ATCTGTGTG-----TCGGTC---TGTTGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------CGGACTGACTGACTCTGACGG-------TT-----------------------------------------TGTGCTCGTTTCGTTT-CG-------------TTT-CGGTACGGTTGGACGCTTGACTTGAGTGTGTAAGACCGCCCCGCCTTGTGACTACCCTCCC----------------C------C---------------------------------AA--------------------GTTGATGCCAGGAAC---------------CGCTTTACAGGAATACA----------------------------GGAATATGGACACTCA-----------CATCCACATCGAG-ATCTACGGGCGGG-TTGCCAATTACACTTTTTGACGCCAGGCG-ACGTGT
droVir3 scaffold_10221:329-425 + C-GGTTCAGTT-----CGATTC---GGTTCGGTTC-------------------------------------------------------------------AGTTCGGTT-------------------------------------------------------------------------------------------------CG-------GTTCA------------------------------------GTTTGGTTCAATTCGGTT-CG----C--GGCGAATGG-GGCATGCGTTGAT--------------------------------------------GTG----------------------------------------------------------------------------------CGAT----------------------------------------------------------------------------------------------------------------------------TGG-------------------------------CT
droMoj3 scaffold_6473:16527898-16527963 - C-AGTTCAGTT-----CAGTTC---AGTTCAGCTC-------------------------------------------------------------------AGTTCAGTG------------------------------------------------------C------------------------------------------GA-------GTTCA------------------------------------GTTCGGTTCGGTTCGG------------------------------------------------TACGTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15126:847690-847877 + G-G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGACGCTTGACTTGAGTGTGTAAGCCGACGTCGGGTTACACACACCCCT------------------------------------------------------------------------------------CATCCGCAAACG---------------CAATCG-CAA---TCGGACTGGCAATGGCAATGGCAATGGGAATGGGAATGGGAATAGGCAAC----GGAGTGAGCGGGATTCGG-GT-TTAGGGCGGA-CTGCCAATTACACTT-TTGACGCCAGGCA-ACGTGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
C-AGTTCAGTTCGGTTGGGTTG---AG---------------------------------------------------------------------------------------CTGAGCTGAGTT----------------------------------------------------------------------------------GA-------GTTCA------------------------------------GTTCTGTTCAGTTCGGTT-CA-------------TGG-GGATGGCGTTGGTCGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACCCCAATTT---------------------------------------------------------------------------------TACAATTCCAGGACCGATC-----------CGATCCCCAGGAATCGA-------------------------------------------------------------CTGTCCG-CT-GTCGGGCGGA-CTGCCAATTACACTTTTTGACGCCGAGCA-CAATGTSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACCGATC-----------CGATCCCCAGGA............................................................................................................................22187.008716606500000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGACCGATC-----------CGATCCCCAGGA............................................................................................................................23167.006721315100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACCGATC-----------CGATCCCCAGG.............................................................................................................................21110.0010630100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACCGATC-----------CGATCCCCAGGAA...........................................................................................................................2317.007020500000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGACCGATC-----------CGATCCCCAGG.............................................................................................................................2215.005100300000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGACCGATC-----------CGATCCCCAGGAA...........................................................................................................................2412.002000100000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATC-----------CGATCCCCAGG.............................................................................................................................1511.001000000000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGACCGATC-----------CGATCCCC................................................................................................................................1911.001000100000000
......................................................................................................................................................................................................................................................................................A-------------TGG-GGATGGCGTTGGTCGCTTG...............................................................................................................................................................................................................................................................................................2311.001100000000000
........................................................................................................................................................................................................................................................................................................................................................CACCCCAATTT---------------------------------------------------------------------------------TACAATT...............................................................................................................................................................1811.001000010000000
......................................................................................................................................................................................................................................................................................A-------------TGG-GGATGGCGTTGGTCGCTTGA..............................................................................................................................................................................................................................................................................................2411.001000000000100
droSec2
C-AGTTC-----GGTTGGGTTG---AGC---------------------------------------------------------------------------------------TGAGCTGAGTT----------------------------------------------------------------------------------GA-------GTTCA------------------------------------GTTCTGTTCAGTTCGGTT-GA-------------TGG-GGATGGCGTTGGTCGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACCCCAATTT---------------------------------------------------------------------------------TACAATTCCAGGACCGATC-----------CGATCCCCAGGAATCGA-------------------------------------------------------------CTGTCCG-CT-GTCGGGCGGA-CTGCCAATTACACTTTTTGACGCCGAGCA-CAATGTSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACCGATC-----------CGATCCCCAGG.............................................................................................................................2111.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGACCGATC-----------CGATCCCCAGGA............................................................................................................................2311.0010010
droEre2
C-AGTTCAGTT-----CAGTTC---AGTTCAGTTC-------------------------------------------------------------------GGTTCGGTT-------------------------------------------------------------------------------------------------CG-------GTTCAGCTGGGTTGGATTG------GCTTGGACTGGGTTGAGCGGAGTTCA-------------------GCTGTTGG-GGATGGCGTTGGTCGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACCCCAATTT---------------------------------------------------------------------------------TACAATTCCAGGACCGATC-----------CGATGC-CAGGCATCGA-------------------------------------------------------------CTGTCCG-CT-GTCGGGCGGA-CTGCCAATTACACATTTTGACGCCGAGCA-CAATGTSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
.........................AGTTCAGTTC-------------------------------------------------------------------GGTTCGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18150.071000100
droYak3
C-AGTTCAGTT-----CAGCTT---GGTTTGGTTG-------------------------------------------------------------------GGTTGAG-----CTGAGTTGAGTT----------------------------------------------------------------------------------GA-------GT--------------------------TGATCTGAGTTCAGTTCAGTTCAGTTAGGTTATGTTGGTGAGGCTGATGGGGGATGGCGTTGGTCGCTTGACTCGAGTGTGTAAGCCGACAGTGGGTTACACCCCAATTT---------------------------------------------------------------------------------TACAATTCCAGGACCGATG-----------CGATCCCCAGGAATCGA-------------------------------------------------------------CTGTCCG-CT-GTCGGGCGGA-CTGCCAATTACACATTTTGACGCCGAGCA-CAATGTSizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
................................TTG-------------------------------------------------------------------GGTTGAG-----CTGAGTTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000001
droEug1
C-AGTTGAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA------------------------------GTTCGGTTGGTCGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACCCCAATTCCA----------------CAATTCCA---------------------------------------------------------CATTTCCAGGTCCGATC-----------AGAGCCACAGGAATCGA-------------------------------------------------------------CTGTCCGCCT-GTCGGGCGGG-CTGCCAATTACACTTTTTGACGCCGAGCA-CAATGTSizeHit CountTotal NormTotal
No Reads
droBia1
C-TGTTC-----GCTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCGGCCGCTTGACTCGAGTGTGTAAGCCGACAGTGGGTTACACCCCAATTCAA----------------CAATTCCA---------------------------------------------------------CAATGCCAGGACCGATC-----------CGATCCACAGGAATCGA------------------------------------------CTGTCGACCGGC-G----ACTGTCCG-CT-GTCGGACGGA-CTGCCAATTACACTTTTTGACGCT------------SizeHit CountTotal NormTotal
No Reads
droTak1
C-G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGGTCGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACCCCAATTCCA----------------CAGTTCTA---------------------------------CAGTTCTACGTTTCCACAGCTCTACAGTTCCAGGACCGATC-----------CGATCCACAGGAATCGA-------------------------------------------------------------CTGTCCG-CT-GTCGGGCGGA-CTGCCAATTACACTTTTTGACGCCGAGCA-CAATGTSizeHit CountTotal NormTotal
No Reads
droEle1
T----TCAGTT-----CAGATAGAGAGA-GAGCCGGG------------------------------------------------------------------------------------------------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------CCGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACCCCGATT-----------------------------------------------------------------------------------GCGATTCCAGGTCCG---------------GATCCACAGGAATCGA-------------------------------------------------------------CTGA----CT-GT----CGGG-CTGCCAATTACACTTTTTGACGCCGAGCA-CGATG-SizeHit CountTotal NormTotal
No Reads
droRho1
C-AG---------------------AGA-GAGCCGGGTCCGGACTTGGGTTTTGGTATGGGTTTTGGTATGAGTTTGGGTATGAGTTTTGGGC-------------------------------------------------------------------------------TT----------------------------------GG-------GT----------------------------------------------TCG--------------------------------TCGGTCAGACGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACCCCGATTCCGATTC------------CAATTCCG---------------------------------AA--------------------TCCGATTCCAGGGCCG---------------GATCCACAGGAATCGA---------------------------------------------C----CGGCTG----ACTGTCCG-CT-GTCGGGCGGG-CTGCCAATTACACTTTTTGACGCCGAGCA-CA----SizeHit CountTotal NormTotal
No Reads
droFic1
C-AGA-------------GAGA---GAA-GAGCCGGG------------------------------------------------------------------------------------------------------------------------------------TTTTCTGTCGGTCGGCTGGTCGT-----------T---TGGTCGGTGGG-TCG--------------TTTGTTGGTT---------------------------------------------------GG-TCCGCAGGACGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACCCCAATTC----------------------------------------------------------------------------------GCAATTCCAGGACC----------------GATCCACAGGAATCGA-------------------------------------------------------------CTGTCCG-CT-GTCGGGCGGG-CTGCCAATTACACTTTTTGACGCCGAGCA-CAATACSizeHit CountTotal NormTotal
No Reads
droKik1
CCAGCTC-----GCTTGAGCTC---AGA-GAGCCGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGCTCGGACGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACCCCGATTTCGAGTC------------CTGTTCCAAGTCCGACTC-----------------------------------------------CGAT-----------TCCGATCCCGAACCAATCCACAG-----------------------------------------------------------------------TC----G-GGCGGGCGGG-CTGCCAATTACACTTTCTGACGCCGAGCA-CAATGTSizeHit CountTotal NormTotal
No Reads
droAna3
C-AGCTC-----GCTTGAGTTC---AGA-GAGCCGGG------------------------------------------------------------------------------------------------------------------------------------TTCTC----------------------------------GG-------G---------------------------------------------------------------------------------TTCGGTTGGACGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACCCCAGTTCC-----------------CT------------GCTCCGATCCCGTCCTCGTTCCCATTTCCG-TTAACGTTTCC-----TTTCCCATCCCTGATCC----------CAATTCAATCCACAGG-----A-------------------------------------------------------------CTGTCCG-CC-ATCGGACGGT-CTGCCAATTACACTTTTTGACGCCGAGCA-CAATGTSizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
No Reads
droBip1
C-AGCTC-----GCTTGAGTTC---AGA-GAGCCGGG------------------------------------------------------------------------------------------------------------------------------------TTCTC----------------------------------GG-------G---------------------------------------------------------------------------------TTCGGTTGGACGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTACACACCAGTTTGCCG--GCTTCCTGCCCCCT------------GCTCCG------------------TTTACG-TTTACGTTTCC-----TTTCCCATTCCTGATCC----------CAATTCAATCCACAGG-----A-------------------------------------------------------------CTGCCCG-CC-ATCGGGCGGT-CTGCCAATTACACTTTTTGACGCCGAGCA-CAATGTSizeHit CountTotal NormTotal
No Reads
dp5
T-TG---GGTT-----TGGGT-----------------------------------------------------------------TTTGGGTTGAGGTTCAGGTTCGCTTCAGTAGAGCTGAGTGGAGAGTTGCTGTGGTGCGGTGCGGCGGTGGAGTGAAGTGGAAGTTT---------------------------------------------------------------------------------------------TCG------------------------------GTTCGGTTGGACGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTATATTCGTACTT-----------------------------------------------------------------------------------GTATTCGATAAAG----------------GATCC-C------------------------------------------------------------------------GGCAA-CT-GACGGGCGGGTTTGCCAATTACACTTTTTGACGCCGTGCGGCAGTG-SizeHit CountTotal NormTotalV112
Male-body		V043
Embryo		V051
Head		M022
Male-body		M040
Female-body		M059
Embryo		M062
Head
No Reads
droPer2
C-GCTTCAGTA-----GAGATG---AGTGGAG-------------------------------------------------------------------------------------------------AGTTGCTGTGGTGCGCTGTGGCGGTGGAGTGAAGTGGAAGTTT---------------------------------------------------------------------------------------------TCG------------------------------GTTCGGTTGGACGCTTGACTTGAGTGTGTAAGCCGACAGTGGGTTATATTCGTACTT-----------------------------------------------------------------------------------GTATTCGATAAAG----------------GATCC-C------------------------------------------------------------------------GGCAA-CT-GACGGGCGGGTTTGCCAATTACACTTTTTGACGCCGTGCGGCAGTG-SizeHit CountTotal NormTotalV111
Male-body		V042
Embryo		V050
Head		V057
Head		M021
Embryo		M042
Female-body
No Reads
droWil2
T-ATCTGTGTG-----TCGGTC---TGTTGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------CGGACTGACTGACTCTGACGG-------TT-----------------------------------------TGTGCTCGTTTCGTTT-CG-------------TTT-CGGTACGGTTGGACGCTTGACTTGAGTGTGTAAGACCGCCCCGCCTTGTGACTACCCTCCC----------------C------C---------------------------------AA--------------------GTTGATGCCAGGAAC---------------CGCTTTACAGGAATACA----------------------------GGAATATGGACACTCA-----------CATCCACATCGAG-ATCTACGGGCGGG-TTGCCAATTACACTTTTTGACGCCAGGCG-ACGTGTSizeHit CountTotal NormTotalV117
Male-body		V118
Embryo		V119
Head		M020
Head		M045
Female-body
No Reads
droVir3
C-GGTTCAGTT-----CGATTC---GGTTCGGTTC-------------------------------------------------------------------AGTTCGGTT-------------------------------------------------------------------------------------------------CG-------GTTCA------------------------------------GTTTGGTTCAATTCGGTT-CG----C--GGCGAATGG-GGCATGCGTTGAT--------------------------------------------GTG----------------------------------------------------------------------------------CGAT----------------------------------------------------------------------------------------------------------------------------TGG-------------------------------CTSizeHit CountTotal NormTotalV116
Male-body		V053
Head		V047
Embryo		M027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis
No Reads
droMoj3
C-AGTTCAGTT-----CAGTTC---AGTTCAGCTC-------------------------------------------------------------------AGTTCAGTG------------------------------------------------------C------------------------------------------GA-------GTTCA------------------------------------GTTCGGTTCGGTTCGG------------------------------------------------TACGTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalV110
Male-body		V056
Head		V049
Head		V041
Embryo		M046
Female-body		M060
Embryo
No Reads
droGri2
G-G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGACGCTTGACTTGAGTGTGTAAGCCGACGTCGGGTTACACACACCCCT------------------------------------------------------------------------------------CATCCGCAAACG---------------CAATCG-CAA---TCGGACTGGCAATGGCAATGGCAATGGGAATGGGAATGGGAATAGGCAAC----GGAGTGAGCGGGATTCGG-GT-TTAGGGCGGA-CTGCCAATTACACTT-TTGACGCCAGGCA-ACGTGTSizeHit CountTotal NormTotalV109
Male-body		M041
Female-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGGCAATGGCAATG................................................................................................18200.05101

Generated: 12/06/2013 at 02:37 PM