ID:

dsi-mir-2489

 Coordinate:

2L:13379254-13379348 +

 Confidence:

Known

 Type:

Unknown

 [View on miRBase]
[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.8 -21.7 -21.3

Flybase annnotation

CDS [Dsim\GD23911-cds]; exon [dsim_GLEANR_7641:3]; intron [Dsim\GD23911-in]; CDS [Dsim\GD23911-cds]; exon [dsim_GLEANR_7641:4]

No Repeatable elements found

Sense Strand Reads

################################################################--------------------------------------------------------------------###############################################################
 ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCAATAAGTTAGACGTGAGTATGGCTATACAAATCATCTGGAACATACGTTCTAATGCATGTATTGTATGTTGTATTTGCAGTTTTATGATAGCAAAGGTCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATA
*************************************************.((.((..((.(((((((((((((((.((((((..(((.((((((....))))))....)))..))))))))))))))))).)))).)).)).))...************************************************ 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M025
embryo
 O002
Head
 GSM343915
embryo
 SRR553486
Ovary		 SRR553488
Ovary		 SRR553485
Ovary		 M053
Female-body		 O001
Testis
 SRR553487
Ovary		 M024
male body
 SRR618934
Ovary
...............................................................................................................TATTGTATGTTGTATTTGCAG............................................................... 21 0 1 68.00 68 37 3 13 5 1 2 1 2 1 3 0 0
...............................................................................................................TATTGTATGTTGTATTTGCAGT.............................................................. 22 0 1 60.00 60 18 20 2 11 3 4 1 0 0 0 0 1
...............................................................................................................TATTGTATGTTGTATTTGCAGA.............................................................. 22 1 1 56.00 56 4 5 0 1 18 11 7 0 0 10 0 0
...............................................................................................................TATTGTATGTTGTATTTGC................................................................. 19 0 1 38.00 38 36 0 0 0 0 0 0 0 1 0 1 0
...............................................................................................................TATTGTATGTTGTATTTGCA................................................................ 20 0 1 38.00 38 28 0 3 1 4 0 1 0 1 0 0 0
...............................................................................................................TATTGTATGTTGTATTTGCAGC.............................................................. 22 1 1 5.00 5 4 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TATTGTATGTTGTATTTGCAGAA............................................................. 23 2 1 2.00 2 0 0 0 0 0 1 1 0 0 0 0 0
...............................................................................................................TATTGTATGTTGTATTTTCAGT.............................................................. 22 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
...............................................................................................................TATTGTATGTTGTATTTGCAGG.............................................................. 22 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TTTTATGATAGCAAAGGTCCCATTGA..................................... 26 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0
...............................................................................................................TATTGTATGTTCTATTTGC................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................CGGATCATATCTATGAGGGC......... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TATTGTATGTTGTATTTGCAGAAA............................................................ 24 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................TATTGTATGTTGTATTTG.................................................................. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................TATTTTATGTTGTATTTGCAGT.............................................................. 22 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................ATTGTATGTTGTATTTGCAGT.............................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................TATTGTATGTTGTATTTGCT................................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................GTGAGTATGGCTATACAAATCATCTGGA....................................................................................................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................TATTGTATGTTGTCTTTGCAGT.............................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................TATTGTATGGTGTATTTGCA................................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TATTGTATGCTGTATTTGCAGT.............................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................TGAGTATGGCTATACAAATCATCTGGA....................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................................TATTGTATGTTGTGTTTGCAGT.............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TCTAAGGCAGGTATCGTATG........................................................................... 20 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................ATTGTATGTTGTATTTGCAGA.............................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TCCCATTGCTGTCACCA............................. 17 2 19 0.21 4 0 0 0 0 1 0 3 0 0 0 0 0
.............................................................................................................TGTATTGTGTGTTGTAT..................................................................... 17 1 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................TTTCTCCTCGGATCATAT................... 18 2 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................................TAGACGAATCATCTGG........................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

################################################################--------------------------------------------------------------------###############################################################
 TATCACTTCGCCCTCATAGATATGATCCGTGGAGACATCAATGGGACCTTTGCTATCATAAAACTGCAAATACAACATACAATACATGCATTAGAACGTATGTTCCAGATGATTTGTATAGCCATACTCACGTCTAACTTATTGCTAAATGTATTTAAATCACGTTTTAATCTAAGATGGAAGTCTCTTCCATGT
************************************************...((.((.((.((((.(((((((((((((((((..(((....((((((....)))))).)))..)))))).))))))))))))))).))..)).)).************************************************* 		Read size # Mismatch Hit Count Total Norm Total
...........................................................................................................................................TATTGCTAAATGTATTGAACT................................... 21 2 1 1.00 1
...........................................................................................................................................TCTTGCTAAATGTATTGAACT................................... 21 3 8 0.13 1
................................................................................................................................................................................ATGGAAGTCGGTTCCAT.. 17 2 19 0.05 1
....ACTTCGGGCTCATAGA............................................................................................................................................................................... 16 2 20 0.05 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 2L:13379204-13379398 + dsi-mir-2489 ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCAATAAGTTAGACGTGAGTATGGC---TATA--------------------CA------------AATC--------------A------------------TCTG---GAACATACGTTCTAATGC---------------A----TGTATTGTATGT-TGT-ATTTGCAGTTTTATGATAGCAAAGGTCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATA
droSec2 scaffold_16:1746001-1746195 + dse_353 ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCAATAAGTTAGACGTGAGTATGGC---TATA--------------------CA------------AATC--------------A------------------TCTG---GAACATACGTTCTAATGC---------------A----TGTATTGTATGT-TGT-ATTTGCAGTTTTATGATAGCAAAGGTCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATA
dm3 chr2L:13609924-13610118 + dme-mir-2489 ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCAATAAGTTAGACGTGAGTATGGC---TATA--------------------CA------------AATC--------------A------------------TCTG---GAACGTAAGTTCTAATGT---------------A----TGTATTGTATGT-TGT-ATTTGCAGTTTTATGATAGCAAAGGTCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATA
droEre2 scaffold_4929:11847788-11847976 - ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCAATAAGTTAGACGTGAGTATGGC---TATC--------------------TA------------AATC--------------A------------------GCC----GAACGTGTATTCTAATGT---------------T---------TGCACTT-TGT-ATTTGCAGTTTTATGATAGCAAAGGTCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATA
droYak3 2L:10029657-10029849 + ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCAATAAGTTAGATGTGAGTATGGC---TATT--------------------TA------------AATC--------------A------------------ACCG----------------AACGTATGTATGTTATATAG-T-------TTGCATTT-TGT-ATTTGCAGTTTTATGATAGCAAAGGTCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATA
droEug1 scf7180000409452:191255-191442 + ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCAATAAGTTAGACGTGAGTATAGT----ACT--------------------TA------------AAT-TATAATTTTAAATCA--------------------------------CATTATAAT----------------------------GTACTT-TGTACTTTTCAGTTTTATGATAGCAAAGGTCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATA
droBia1 scf7180000302408:2742644-2742835 - ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCAATAAGTTAGAGGTGAGTAC---TCCTA----AAA-------------------------------TA--------------TACTAAAAATAAGAAAACAT----------------TCTAAC------A-----ACCA-------ATA------TT-TGC-CCTTGCAGATTTATGATAGCAAAGGTCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATA
droEle1 scf7180000491338:1217860-1218051 + ACATGGAAGAGACTTCCATCTTAGACTAAAACGTGATTTAAATACATTTAGCAATAAGTTAGACGTGAGTATTGT---CATT--------------------AA------------GATA--------------G------------------AAC-----------------AACATAAACATGTTAAACATAT-------TTGTATTT-T-T-TTTTTCAGTTTTATGATAGCAAAGGTCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATA
droRho1 scf7180000780107:475196-475384 - ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCAATAAGTTAGACGTGAGTAT---T---TTT--------------------TA------------AATA--------------ATTTAAA-------------------AAACTTACAACTTAATGT---------------G---------TACACCT-TGT-ATTTTCAGTTTTATGATAGCAAAGGTCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGTAGTGATA
droFic1 scf7180000453925:389380-389569 - ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCAATAAGTTAGACGTGAGTATTGC---TCTC--------------------AA------------GAT-TAAAAT------------------CAAAAACCC-----------T--TACTAAG--------A-------C-------------ATACTTTTTT-ATTTTTAGTTTTATGATAGCAAAGGTCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATA
droKik1 scf7180000302656:77406-77596 + ACATGGAAGAGACTTCCATCTTAGATTAAAGCGTGATTTAAATACATTTAGCAATAAGTTAGACGTGAGTAT---TACAT----ACGCAATTATATTAATTTTAA--------------------------G----------------------------------------TAATGC---------------T----CGTATT-TCCTT-TAC-TTTTCCAGTTTTATGATAGCAAGGGCCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATA
droBip1 scf7180000396728:1558113-1558306 - ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCGATAAGTTAGACGTGAGTAT---TAATATA--------------------AT------------CCT-TAAAAT------------------ATAAAATCAATAA-------T--TAATCAA--------A----------------A----CCTCTT-TCTGATCCATAGTTTTATGATAGCAATGGCCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATA
dp5 4_group1:1874101-1874295 - ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCGATAAGTTAGACGTGAGTAT---TTTCC----ATA---------------C--CTTTTTAAAACAATC--------------A------------------TT----------------TTGATA-----------TACATA----TATATTTTTTGT-TGT-G--TTTAGTTTTATGATAGCAACGGCCCCATTGATGTCTCCACGGATCATATCTATGCGGGCGAAGTGATA
droPer2 scaffold_5:3326125-3326325 + ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCGATAAGTTAGACGTGAGTATATC---TTTGCCATC---------------T--CTTTTTAAAAT---------------------------------------------ATTTTATATTTTTATAT------AT--TAC--A----TATATTTTTTGG------TGTTTAGTTTTATGATAGCAACGGCCCCATTGATGTCTCCACGGATCATATCTATGCGGGCGAAGTGATA
droVir3 scaffold_12723:5236307-5236497 - ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGTGATAAGTTAGACGTGAGTAT---TATCA----ACATATATGAATTATTTTAAA--------------------------ATAA--------------------------------TAATCGAAT----------------------------TTAATT-TGT-TATCCCAGTTTTATGATAGCAACGGCCCCATTGATGTCTCAACGGATCATATCTATGAGGGCGAAGTGATA
droMoj3 scaffold_6500:16444059-16444245 + ACATGGAAAGGATTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGTGATAAGTTAGACGTGAGTAT---TACAG----AGG---------------C--CCTATCAAAAT-ATC--------------A------------------TT----------------------C---------------G----TGTATCTAATAT-AATATTTTTCAGTTTTATGATAACAACGGCCCCATTGATGTCTCAACGGATCATATCTATGAGGGCGATGTGATA
droGri2 scaffold_15126:8263445-8263636 - ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGTGATAAGTTAGACGTGAGTAT---T--TATT--------------------AA------------CTTC--------------A------------------TTCAACGTAATATACATACTAAAAT---------------ATGAATA-------CAT---CATTTTGCAGTCTTATGATAGCAACGGCCCCATTGATGTCTCAACGGATCATATCTATGAGGGCGAAGTGATA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCAATAAGTTAGACGTGAGTATGGC---TATA--------------------CA------------AATC--------------A------------------TCTG---GAACATACGTTCTAATGC---------------A----TGTATTGTATGT-TGT-ATTTGCAGTTTTATGATAGCAAAGGTCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATASizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
........................................................................................................................................................................................................TATTGTATGT-TGT-ATTTGCAG...............................................................21168.006853703113211320
........................................................................................................................................................................................................TATTGTATGT-TGT-ATTTGCAGT..............................................................22160.0060111802002013041
........................................................................................................................................................................................................TATTGTATGT-TGT-ATTTGC.................................................................19138.00380361010000000
........................................................................................................................................................................................................TATTGTATGT-TGT-ATTTGCA................................................................20138.00381280013014000
...............................................................................................................................................................................................................................TTTTATGATAGCAAAGGTCCCATTGA.....................................2612.002000000020000
.................................................................................................................................................................................................................................................................CGGATCATATCTATGAGGGC.........2011.001010000000000
........................................................................................................................................................................................................TATTGTATGT-TGT-ATTTG..................................................................1811.001000001000000
.........................................................................................................................................................................................................ATTGTATGT-TGT-ATTTGCAGT..............................................................2111.001000001000000
................................................................GTGAGTATGGC---TATA--------------------CA------------AATC--------------A------------------TCTG---GA............................................................................................................................2811.001000000001000
.................................................................TGAGTATGGC---TATA--------------------CA------------AATC--------------A------------------TCTG---GA............................................................................................................................2711.001000000100000
droSec2
ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCAATAAGTTAGACGTGAGTATGGC---TATA--------------------CA------------AATC--------------A------------------TCTG---GAACATACGTTCTAATGC---------------A----TGTATTGTATGT-TGT-ATTTGCAGTTTTATGATAGCAAAGGTCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATASizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
........................................................................................................................................................................................................TATTGTATGT-TGT-ATTTGCAGT..............................................................221136.0013613100185
........................................................................................................................................................................................................TATTGTATGT-TGT-ATTTGCAG...............................................................211106.00106919726
........................................................................................................................................................................................................TATTGTATGT-TGT-ATTTGCA................................................................20154.005441472
........................................................................................................................................................................................................TATTGTATGT-TGT-ATTTGC.................................................................19110.001000100
................................................................GTGAGTATGGC---TATA--------------------CA------------AATC--------------A------------------TCTG---GA............................................................................................................................2811.0010001
.........................................................................................................................................................................................................ATTGTATGT-TGT-ATTTGC.................................................................1811.0010010
.......................................................................................................A------------AATC--------------A------------------TCTG---GAACATACGTT...................................................................................................................2111.0011000
.........................................................................................................................................................................................................ATTGTATGT-TGT-ATTTGCAG...............................................................2011.0010100
..........................................................................................................................................................................................................TTGTATGT-TGT-ATTTGCA................................................................1811.0010010
droEre2
ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCAATAAGTTAGACGTGAGTATGGC---TATC--------------------TA------------AATC--------------A------------------GCC----GAACGTGTATTCTAATGT---------------T---------TGCACTT-TGT-ATTTGCAGTTTTATGATAGCAAAGGTCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATASizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
...................CTTAGATTAAAACGTGATTTAAAT...................................................................................................................................................................................................................................................2411.001000100
droYak3
ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCAATAAGTTAGATGTGAGTATGGC---TATT--------------------TA------------AATC--------------A------------------ACCG----------------AACGTATGTATGTTATATAG-T-------TTGCATTT-TGT-ATTTGCAGTTTTATGATAGCAAAGGTCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATASizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
...............................................................................................................................................................................................................................TTTTATGATAGCAAAGGTCCCATTGAT....................................2711.0011000000
droEug1
ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCAATAAGTTAGACGTGAGTATAGT----ACT--------------------TA------------AAT-TATAATTTTAAATCA--------------------------------CATTATAAT----------------------------GTACTT-TGTACTTTTCAGTTTTATGATAGCAAAGGTCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATASizeHit CountTotal NormTotal
No Reads
droBia1
ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCAATAAGTTAGAGGTGAGTAC---TCCTA----AAA-------------------------------TA--------------TACTAAAAATAAGAAAACAT----------------TCTAAC------A-----ACCA-------ATA------TT-TGC-CCTTGCAGATTTATGATAGCAAAGGTCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATASizeHit CountTotal NormTotal
No Reads
droEle1
ACATGGAAGAGACTTCCATCTTAGACTAAAACGTGATTTAAATACATTTAGCAATAAGTTAGACGTGAGTATTGT---CATT--------------------AA------------GATA--------------G------------------AAC-----------------AACATAAACATGTTAAACATAT-------TTGTATTT-T-T-TTTTTCAGTTTTATGATAGCAAAGGTCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATASizeHit CountTotal NormTotal
No Reads
droRho1
ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCAATAAGTTAGACGTGAGTAT---T---TTT--------------------TA------------AATA--------------ATTTAAA-------------------AAACTTACAACTTAATGT---------------G---------TACACCT-TGT-ATTTTCAGTTTTATGATAGCAAAGGTCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGTAGTGATASizeHit CountTotal NormTotal
No Reads
droFic1
ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCAATAAGTTAGACGTGAGTATTGC---TCTC--------------------AA------------GAT-TAAAAT------------------CAAAAACCC-----------T--TACTAAG--------A-------C-------------ATACTTTTTT-ATTTTTAGTTTTATGATAGCAAAGGTCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATASizeHit CountTotal NormTotal
No Reads
droKik1
ACATGGAAGAGACTTCCATCTTAGATTAAAGCGTGATTTAAATACATTTAGCAATAAGTTAGACGTGAGTAT---TACAT----ACGCAATTATATTAATTTTAA--------------------------G----------------------------------------TAATGC---------------T----CGTATT-TCCTT-TAC-TTTTCCAGTTTTATGATAGCAAGGGCCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATASizeHit CountTotal NormTotal
No Reads
droBip1
ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCGATAAGTTAGACGTGAGTAT---TAATATA--------------------AT------------CCT-TAAAAT------------------ATAAAATCAATAA-------T--TAATCAA--------A----------------A----CCTCTT-TCTGATCCATAGTTTTATGATAGCAATGGCCCCATTGATGTCTCCACGGATCATATCTATGAGGGCGAAGTGATASizeHit CountTotal NormTotal
No Reads
dp5
ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCGATAAGTTAGACGTGAGTAT---TTTCC----ATA---------------C--CTTTTTAAAACAATC--------------A------------------TT----------------TTGATA-----------TACATA----TATATTTTTTGT-TGT-G--TTTAGTTTTATGATAGCAACGGCCCCATTGATGTCTCCACGGATCATATCTATGCGGGCGAAGTGATASizeHit CountTotal NormTotalV112
Male-body		V043
Embryo		V051
Head		M022
Male-body		M040
Female-body		M059
Embryo		M062
Head
...............................CGTGATTTAAATACATTTAGC..........................................................................................................................................................................................................................................2120.5010000100
................................................................................................................................................................................................................................TTTATGATAGCAACGGCCCCA.........................................2120.5010100000
............CTTCCATCTTAGATTAAAACGTGATT........................................................................................................................................................................................................................................................2620.5010000100
droPer2
ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGCGATAAGTTAGACGTGAGTATATC---TTTGCCATC---------------T--CTTTTTAAAAT---------------------------------------------ATTTTATATTTTTATAT------AT--TAC--A----TATATTTTTTGG------TGTTTAGTTTTATGATAGCAACGGCCCCATTGATGTCTCCACGGATCATATCTATGCGGGCGAAGTGATASizeHit CountTotal NormTotalV111
Male-body		V042
Embryo		V050
Head		V057
Head		M021
Embryo		M042
Female-body
...................................................................................................................................................................................................................................................................GATCATATCTATGCGGGCGAAGT....2311.001000001
droVir3
ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGTGATAAGTTAGACGTGAGTAT---TATCA----ACATATATGAATTATTTTAAA--------------------------ATAA--------------------------------TAATCGAAT----------------------------TTAATT-TGT-TATCCCAGTTTTATGATAGCAACGGCCCCATTGATGTCTCAACGGATCATATCTATGAGGGCGAAGTGATASizeHit CountTotal NormTotalV116
Male-body		V053
Head		V047
Embryo		M027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis
................................................................................................................................................................................................................................................................ACGGATCATATCTATGAG............1811.0010000000000000000000000000000000000000001000
...............CCATCTTAGATTAAAACGTGATTTAA.....................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000010000000
.......................................................................................................................................................................................................................................TAGCAACGGCCCCATTGATGTCT................................2311.0010000000000000000000000000000000010000000000
droMoj3
ACATGGAAAGGATTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGTGATAAGTTAGACGTGAGTAT---TACAG----AGG---------------C--CCTATCAAAAT-ATC--------------A------------------TT----------------------C---------------G----TGTATCTAATAT-AATATTTTTCAGTTTTATGATAACAACGGCCCCATTGATGTCTCAACGGATCATATCTATGAGGGCGATGTGATASizeHit CountTotal NormTotalV110
Male-body		V056
Head		V049
Head		V041
Embryo		M046
Female-body		M060
Embryo
No Reads
droGri2
ACATGGAAGAGACTTCCATCTTAGATTAAAACGTGATTTAAATACATTTAGTGATAAGTTAGACGTGAGTAT---T--TATT--------------------AA------------CTTC--------------A------------------TTCAACGTAATATACATACTAAAAT---------------ATGAATA-------CAT---CATTTTGCAGTCTTATGATAGCAACGGCCCCATTGATGTCTCAACGGATCATATCTATGAGGGCGAAGTGATASizeHit CountTotal NormTotalV109
Male-body		M041
Female-body
...................................................................................................................................................................................................................................ATGATAGCAACGGCCCCATTGATG...................................2411.00101
...................................................................................................................................................................................................................................................................GATCATATCTATGAGGGCGAAGTG...2411.00101

Generated: 12/06/2013 at 02:37 PM