dsi-mir-10

TGCCCAGCGGAGTTCATTTCGCCCCAGCGACTGTTCCTCATCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCTTTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAAAAAGTGTAGCTTATGGCAAGCGATAAAGTGATTT *****************************************..(((..(((((...(((((.((((.(((((((((((((............))))))))))))).)))).)).)))...)))))..)))....***************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M025 embryo	M024 male body	M023 head	M053 Female-body	GSM343915 embryo	SRR553487 Ovary	SRR553485 Ovary	SRR553488 Ovary	SRR553486 Ovary	O001 Testis	O002 Head	SRR618934 Ovary
..........................................................ACCCTGTAGATCCGAATTTGTT.................................................................................................	22	0	1	216269.00	216269	88348	37469	11214	9099	26268	12743	16516	10253	2920	774	344	321
..................................................................................................CAAATTCGGTTCTAGAGAGGTTT........................................................	23	0	1	95859.00	95859	31242	17723	8051	16053	3740	6866	1669	6748	434	2151	1096	86
..........................................................ACCCTGTAGATCCGAATTTGT..................................................................................................	21	0	1	44315.00	44315	9132	17348	10283	851	491	1649	2422	1176	432	326	179	26
..................................................................................................CAAATTCGGTTCTAGAGAGGTT.........................................................	22	0	1	37477.00	37477	5654	13682	10364	2192	278	1986	1262	1470	299	182	106	2
..........................................................ACCCTGTAGATCCGAATTTG...................................................................................................	20	0	1	9026.00	9026	557	3379	3614	162	11	106	138	43	31	723	261	1
..................................................................................................CAAATTCGGTTCTAGAGAGGT..........................................................	21	0	1	7734.00	7734	1657	2072	934	1035	104	516	475	375	97	324	139	6
.........................................................TACCCTGTAGATCCGAATTTGT..................................................................................................	22	0	1	4010.00	4010	453	130	85	1	5	37	52	30	3212	2	3	0
..........................................................ACCCTGTAGATCCGAATTTGG..................................................................................................	21	1	1	2895.00	2895	877	1443	562	9	2	0	2	0	0	0	0	0
..........................................................ACCCTGTAGATCCGAATT.....................................................................................................	18	0	1	2345.00	2345	415	420	286	6	1	5	8	5	3	882	313	1
..........................................................ACCCTGTAGATCCGAATTTGC..................................................................................................	21	1	1	1975.00	1975	459	848	665	1	1	0	0	1	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGG...........................................................	20	0	1	1711.00	1711	83	404	209	239	26	80	126	54	26	294	169	1
..........................................................ACCCTGTAGATCCGAATTTGTTA................................................................................................	23	1	1	1514.00	1514	736	475	72	16	7	103	52	39	14	0	0	0
...................................................................................................AAATTCGGTTCTAGAGAGGTTT........................................................	22	0	1	1412.00	1412	37	18	8	1278	18	20	3	22	0	6	2	0
..........................................................ACCCTGTAGATCCGAATTTGTC.................................................................................................	22	1	1	1366.00	1366	851	329	126	7	34	7	2	8	1	0	0	1
...........................................................CCCTGTAGATCCGAATTTGTT.................................................................................................	21	0	1	1290.00	1290	249	124	81	818	3	5	3	5	1	1	0	0
..........................................................ACCCTGTAGATCCGAATTTGTTT................................................................................................	23	0	1	1286.00	1286	335	353	58	130	167	27	70	17	13	78	34	4
..................................................................................................CAAATTCGGTTCTAGAGA.............................................................	18	0	1	1283.00	1283	5	20	7	14	3	16	5	28	1	803	381	0
..................................................................................................CAAATTCGGTTCTAGAGAG............................................................	19	0	1	1208.00	1208	5	23	19	31	6	24	28	26	6	706	333	1
..........................................................ACCCTGTAGATCCGAATTT....................................................................................................	19	0	1	1034.00	1034	64	234	173	8	4	9	17	12	8	368	137	0
..................................................................................................CAAATTCGGTTCTAGAGAGGGTT........................................................	23	1	1	778.00	778	196	132	52	344	33	7	5	7	2	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTT.......................................................	24	1	1	705.00	705	110	221	60	183	69	13	27	14	7	0	0	1
..........................................................ACCCTGTAGATCCGCATTTGTT.................................................................................................	22	1	1	536.00	536	8	9	2	0	513	2	2	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGG..........................................................	21	1	1	437.00	437	175	163	74	23	0	0	1	0	1	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGTTC........................................................	23	1	1	432.00	432	170	137	111	5	2	1	3	3	0	0	0	0
...........................................................CCCTGTAGATCCGAATTTGTTT................................................................................................	22	0	1	364.00	364	199	89	57	7	8	0	1	1	0	2	0	0
..........................................................ACCCTGGAGATCCGAATTTGTT.................................................................................................	22	1	1	324.00	324	100	36	14	2	164	1	4	2	1	0	0	0
..............................................................TGTAGATCCGAATTTGTT.................................................................................................	18	0	1	324.00	324	196	53	22	1	1	34	3	8	3	0	0	3
..........................................................GCCCTGTAGATCCGAATTTGTT.................................................................................................	22	1	1	321.00	321	133	66	50	5	37	2	19	5	4	0	0	0
..........................................................ACCCTGTAGATCCGAATTTGTTAA...............................................................................................	24	2	1	313.00	313	91	178	15	1	0	19	2	7	0	0	0	0
..........................................................ACCCTGTAGATCCGAATTTTTT.................................................................................................	22	1	1	312.00	312	66	14	14	42	30	90	18	34	3	0	0	1
..........................................................ACCCTGTAGATCCGAATTTGTG.................................................................................................	22	1	1	307.00	307	195	95	8	0	9	0	0	0	0	0	0	0
..........................................................ACCCTGTAGATCTGAATTTGTT.................................................................................................	22	1	1	298.00	298	104	47	20	3	48	13	39	13	11	0	0	0
.........................................................TACCCTGTAGATCCGAATTTG...................................................................................................	21	0	1	285.00	285	26	14	21	1	1	1	4	1	215	0	1	0
..................................................................................................CAAATTCGGTTCTAGAGAGGTC.........................................................	22	1	1	270.00	270	48	115	101	5	0	1	0	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGC..........................................................	21	1	1	270.00	270	74	121	70	4	0	0	1	0	0	0	0	0
..........................................................ACCCTGTAGATTCGAATTTGTT.................................................................................................	22	1	1	267.00	267	24	10	2	17	21	50	91	26	25	0	0	1
...................................................................................................AAATTCGGTTCTAGAGAGGTT.........................................................	21	0	1	264.00	264	11	19	11	203	4	5	2	6	1	1	1	0
..................................................................................................CAAATTCGGTTCTAGATAGGTTT........................................................	23	1	1	260.00	260	135	39	26	20	3	29	1	7	0	0	0	0
..........................................................ATCCTGTAGATCCGAATTTGTT.................................................................................................	22	1	1	223.00	223	75	39	9	8	29	12	26	17	8	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGGT.........................................................	22	1	1	221.00	221	17	109	43	47	2	1	2	0	0	0	0	0
..........................................................ACCCTGTAGATCCGACTTTGTT.................................................................................................	22	1	1	190.00	190	2	6	0	0	169	7	4	2	0	0	0	0
..........................................................ACCCTGTAGATCCGAATTTGGT.................................................................................................	22	1	1	189.00	189	26	14	2	93	42	0	10	0	2	0	0	0
..........................................................ACACTGTAGATCCGAATTTGTT.................................................................................................	22	1	1	187.00	187	20	9	6	1	143	1	5	2	0	0	0	0
..........................................................ACCCTGTAGATCCAAATTTGTT.................................................................................................	22	1	1	186.00	186	108	27	9	12	9	11	2	8	0	0	0	0
............................................................CCTGTAGATCCGAATTTGTT.................................................................................................	20	0	1	181.00	181	94	32	12	29	10	0	1	3	0	0	0	0
..................................................................................................CAAATTCGGTTCTATAGAGGTTT........................................................	23	1	1	179.00	179	93	29	20	23	3	4	1	6	0	0	0	0
.........................................................TACCCTGTAGATCCGAATTT....................................................................................................	20	0	1	174.00	174	0	0	1	0	0	0	3	0	170	0	0	0
...........................................................CCCTGTAGATCCGAATTTGT..................................................................................................	20	0	1	165.00	165	16	31	24	84	0	2	0	0	8	0	0	0
..................................................................................................CAAATTCGGCTCTAGAGAGGTTT........................................................	23	1	1	164.00	164	66	34	20	16	24	3	0	1	0	0	0	0
..........................................................ACCCTGCAGATCCGAATTTGTT.................................................................................................	22	1	1	162.00	162	57	27	5	14	47	2	5	4	0	0	0	1
..........................................................ACCCTGTAGATCCGAATTTGCT.................................................................................................	22	1	1	161.00	161	55	24	7	6	56	5	4	4	0	0	0	0
..........................................................ACCCCGTAGATCCGAATTTGTT.................................................................................................	22	1	1	158.00	158	77	19	10	12	26	6	2	6	0	0	0	0
..........................................................AACCTGTAGATCCGAATTTGTT.................................................................................................	22	1	1	157.00	157	14	6	0	0	129	1	4	1	1	0	0	1
.........................................................TACCCTGTAGATCCGAATTTGTT.................................................................................................	23	0	1	145.00	145	43	25	20	8	4	6	6	3	30	0	0	0
..........................................................ACCCTGTAGATCCGGATTTGTT.................................................................................................	22	1	1	141.00	141	24	11	8	0	87	4	4	1	2	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGCTT........................................................	23	1	1	141.00	141	63	35	15	9	13	2	1	3	0	0	0	0
..........................................................ACTCTGTAGATCCGAATTTGTT.................................................................................................	22	1	1	134.00	134	37	15	4	5	17	23	15	14	4	0	0	0
..................................................................................................CAAATTCGGGTCTAGAGAGGTTT........................................................	23	1	1	133.00	133	41	34	10	36	11	0	0	1	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGTTTT........................................................	23	1	1	132.00	132	67	12	7	32	1	10	0	3	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTA.......................................................	24	1	1	131.00	131	4	6	2	29	5	29	20	31	5	0	0	0
..........................................................ACCCTGTAGACCCGAATTTGTT.................................................................................................	22	1	1	130.00	130	35	28	8	12	35	4	4	3	0	0	0	1
..........................................................ACCCTGTAGCTCCGAATTTGTT.................................................................................................	22	1	1	123.00	123	4	1	0	1	110	3	3	1	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGACAGGTTT........................................................	23	1	1	122.00	122	78	15	15	2	1	8	0	3	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTC.......................................................	24	1	1	119.00	119	45	37	22	3	2	6	1	3	0	0	0	0
..........................................................ACCCTGTAGGTCCGAATTTGTT.................................................................................................	22	1	1	111.00	111	23	18	1	3	47	5	7	3	3	0	0	1
..........................................................ACCCTGTAGATCCTAATTTGTT.................................................................................................	22	1	1	111.00	111	65	17	3	6	11	2	6	1	0	0	0	0
.............................................................CTGTAGATCCGAATTTGTT.................................................................................................	19	0	1	110.00	110	62	13	7	6	4	6	1	6	1	0	0	4
..........................................................ACCTTGTAGATCCGAATTTGTT.................................................................................................	22	1	1	107.00	107	25	7	1	2	18	19	13	12	10	0	0	0
...................................................................................................AAATTCGGTTCTAGAGAGGT..........................................................	20	0	1	106.00	106	6	2	1	91	0	2	1	1	1	1	0	0
..........................................................ACCCTGTAGATCCGTATTTGTT.................................................................................................	22	1	1	106.00	106	7	2	0	4	92	1	0	0	0	0	0	0
..........................................................ACCCTGTGGATCCGAATTTGTT.................................................................................................	22	1	1	105.00	105	32	18	5	1	37	4	5	2	1	0	0	0
..........................................................ACCCTTTAGATCCGAATTTGTT.................................................................................................	22	1	1	101.00	101	8	10	0	3	7	31	17	25	0	0	0	0
..........................................................ACCCTGTAGATTTGAATTTGTT.................................................................................................	22	2	1	99.00	99	0	0	0	0	0	19	45	13	22	0	0	0
....................................................................................................AATTCGGTTCTAGAGAGGTTT........................................................	21	0	1	99.00	99	2	1	0	90	0	0	0	3	0	2	1	0
..........................................................GCCCTGTAGATCCGAATTTGT..................................................................................................	21	1	1	98.00	98	18	37	36	0	1	0	4	0	2	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGATGTTT........................................................	23	1	1	98.00	98	21	7	5	50	6	3	2	4	0	0	0	0
.........................................................TACCCTGTAGATCCGAATATTGT.................................................................................................	23	3	2	92.50	185	0	0	0	0	0	156	0	22	7	0	0	0
..................................................................................................CAAATTCGGTTCTAGGGAGGTTT........................................................	23	1	1	92.00	92	46	20	4	6	8	3	1	4	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGGGGTTT........................................................	23	1	1	89.00	89	45	19	6	9	7	2	0	1	0	0	0	0
..........................................................ACCATGTAGATCCGAATTTGTT.................................................................................................	22	1	1	89.00	89	1	6	1	36	41	2	1	1	0	0	0	0
..................................................................................................CAAATTAGGTTCTAGAGAGGTTT........................................................	23	1	1	85.00	85	3	5	0	71	4	1	0	1	0	0	0	0
..........................................................ACCCTGTAGATACGAATTTGTT.................................................................................................	22	1	1	84.00	84	10	14	1	1	48	1	4	2	2	0	0	1
..........................................................ACCCTGTAGATCCCAATTTGTT.................................................................................................	22	1	1	83.00	83	41	11	3	1	21	2	0	4	0	0	0	0
..................................................................................................CAAATTCGGTTCTGGAGAGGTTT........................................................	23	1	1	82.00	82	11	28	29	9	2	0	0	3	0	0	0	0
..........................................................ACCCTGTAGATCCGAATTTGTA.................................................................................................	22	1	1	77.00	77	12	38	11	5	2	3	3	2	0	0	0	1
..........................................................ACCCTGTATATCCGAATTTGTT.................................................................................................	22	1	1	74.00	74	10	6	2	0	20	16	10	9	1	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGATT........................................................	23	1	1	73.00	73	36	10	8	2	11	2	0	4	0	0	0	0
...............................................................GTAGATCCGAATTTGTT.................................................................................................	17	0	1	73.00	73	0	0	0	0	0	32	26	8	0	0	0	7
..........................................................ACCCTGTAGATCCGAATTTGTTG................................................................................................	23	1	1	73.00	73	36	19	6	7	1	0	4	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTACAGAGGTTT........................................................	23	1	1	72.00	72	55	9	4	1	1	1	0	1	0	0	0	0
..........................................................ACCCTGTAGATCCGAGTTTGTT.................................................................................................	22	1	1	71.00	71	19	8	2	1	24	3	8	4	2	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGGTTT..........................................................	21	3	2	70.00	140	59	33	21	14	0	3	2	8	0	0	0	0
..........................................................ACCCTGTAGATCCGATTTTGTT.................................................................................................	22	1	1	68.00	68	9	8	2	14	26	2	6	0	1	0	0	0
..................................................................................................CAACTTCGGTTCTAGAGAGGTTT........................................................	23	1	1	68.00	68	1	0	1	62	4	0	0	0	0	0	0	0
..................................................................................................TAAATTCGGTTCTAGAGAGGTTT........................................................	23	1	1	67.00	67	10	2	4	29	4	5	6	6	1	0	0	0
..........................................................AGCCTGTAGATCCGAATTTGTT.................................................................................................	22	1	1	66.00	66	15	5	3	12	11	1	15	1	2	0	0	1
..................................................................................................CAAATTCGGCTCTAGAGAGGTT.........................................................	22	1	1	66.00	66	12	30	18	3	0	0	0	2	1	0	0	0
..........................................................ACCCTATAGATCCGAATTTGTT.................................................................................................	22	1	1	66.00	66	19	6	2	8	20	0	6	4	1	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGCGGTTT........................................................	23	1	1	66.00	66	1	0	3	47	12	1	1	1	0	0	0	0
..........................................................ACCCTGTAGAGCCGAATTTGTT.................................................................................................	22	1	1	66.00	66	14	16	3	0	21	0	10	0	2	0	0	0
..........................................................ACCCTGAAGATCCGAATTTGTT.................................................................................................	22	1	1	66.00	66	26	5	0	17	13	1	2	1	1	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGTTG........................................................	23	1	1	65.00	65	24	28	6	5	2	0	0	0	0	0	0	0
..........................................................ACCCTGTAGATCCGAATTCGTT.................................................................................................	22	1	1	65.00	65	11	11	6	0	24	1	3	8	1	0	0	0
..........................................................ACCCTGTAGATCAGAATTTGTT.................................................................................................	22	1	1	65.00	65	9	10	1	1	34	5	3	2	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGCT.........................................................	22	1	1	64.00	64	11	32	19	0	2	0	0	0	0	0	0	0
..........................................................ACCCTGTAGATCCGAACTTGTT.................................................................................................	22	1	1	63.00	63	7	9	3	1	35	3	1	2	0	0	0	2
..................................................................................................CAAATTCGGTTCTAGAGAGGTG.........................................................	22	1	1	62.00	62	14	32	14	2	0	0	0	0	0	0	0	0
..........................................................ACCCTGTAGATCCGAATTTCTT.................................................................................................	22	1	1	62.00	62	40	13	1	2	5	0	1	0	0	0	0	0
.................................................................................................ACAAATTCGGTTCTAGAGAGGTTT........................................................	24	0	1	61.00	61	27	3	2	13	1	5	0	5	2	1	2	0
..........................................................ACCCTGTAGATCCGAATTTTT..................................................................................................	21	1	1	57.00	57	10	6	6	9	0	17	4	5	0	0	0	0
..........................................................ACCCTGTAGATCCGAATCTGTT.................................................................................................	22	1	1	56.00	56	18	10	0	5	20	2	0	0	1	0	0	0
..........................................................TCCCTGTAGATCCGAATTTGTT.................................................................................................	22	1	1	55.00	55	6	3	0	12	6	6	15	2	5	0	0	0
..................................................................................................CAAATTCGGTTCTGGAGAGGTT.........................................................	22	1	1	54.00	54	1	23	25	2	1	1	0	1	0	0	0	0
..................................................................................................CAAATTCGGTTTTAGAGAGGTTT........................................................	23	1	1	53.00	53	4	1	0	38	0	3	1	5	1	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGTA.........................................................	22	1	1	53.00	53	3	23	5	19	0	1	2	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTG.......................................................	24	0	1	50.00	50	16	5	5	15	0	1	0	4	0	4	0	0
..........................................................ACCCTCTAGATCCGAATTTGTT.................................................................................................	22	1	1	48.00	48	19	5	1	0	12	6	2	2	1	0	0	0
..........................................................ACGCTGTAGATCCGAATTTGTT.................................................................................................	22	1	1	48.00	48	8	4	5	6	8	4	10	2	1	0	0	0
..........................................................ACCCTGTAGATCCGAATTTGAT.................................................................................................	22	1	1	47.00	47	11	3	2	1	19	2	5	1	1	0	0	2
..........................................................ACCCTGTCGATCCGAATTTGTT.................................................................................................	22	1	1	47.00	47	4	0	1	4	37	0	0	1	0	0	0	0
.........................................................TACCCTGTAGATCCGAATTTGG..................................................................................................	22	1	1	47.00	47	28	14	5	0	0	0	0	0	0	0	0	0
..................................................................................................CAAATTCGGTCCTAGAGAGGTTT........................................................	23	1	1	47.00	47	13	4	1	15	5	2	0	5	1	0	0	1
..................................................................................................CAAATTCGGGTCTAGAGAGGTT.........................................................	22	1	1	46.00	46	9	21	12	4	0	0	0	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGTTA........................................................	23	1	1	45.00	45	3	6	2	18	1	4	5	5	1	0	0	0
..........................................................ACCCTGGAGATCCGAATTTGT..................................................................................................	21	1	1	44.00	44	10	21	9	0	3	0	1	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTATAGAGGTT.........................................................	22	1	1	43.00	43	7	18	9	6	1	1	1	0	0	0	0	0
..................................................................................................CAAATTCGTTTCTAGAGAGGTTT........................................................	23	1	1	43.00	43	11	6	2	13	0	5	1	5	0	0	0	0
...........................................................ACCTGTAGATCCGAATTTGTT.................................................................................................	21	1	1	42.00	42	11	6	8	0	2	5	2	7	0	0	0	1
..........................................................ACCCTGTAGATCCGAATTTATT.................................................................................................	22	1	1	42.00	42	16	2	2	2	15	1	1	2	0	0	0	1
..........................................................ACCCTGTAGATCGGAATTTGTT.................................................................................................	22	1	1	42.00	42	17	13	1	2	4	2	1	0	1	0	0	1
..................................................................................................CAAATTCAGTTCTAGAGAGGTTT........................................................	23	1	1	39.00	39	16	7	2	10	1	0	0	3	0	0	0	0
..........................................................ACCCCGTAGATCCGAATTTGT..................................................................................................	21	1	1	39.00	39	10	20	7	1	0	1	0	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGTGAGGTTT........................................................	23	1	1	39.00	39	4	1	0	26	5	2	1	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGATAGGTT.........................................................	22	1	1	39.00	39	8	14	8	4	1	1	1	1	1	0	0	0
..........................................................ACCCTGTAGATCCGCCTTTGTT.................................................................................................	22	2	1	39.00	39	0	1	0	0	38	0	0	0	0	0	0	0
..........................................................ACCCTGCAGATCCGAATTTGT..................................................................................................	21	1	1	38.00	38	9	10	13	1	1	3	0	1	0	0	0	0
..........................................................ACCCTGTAGTTCCGAATTTGTT.................................................................................................	22	1	1	38.00	38	2	1	1	1	23	2	5	3	0	0	0	0
..........................................................CCCCTGTAGATCCGAATTTGTT.................................................................................................	22	1	1	38.00	38	4	7	1	2	8	3	10	1	2	0	0	0
..........................................................ATCCTGTAGATCCGAATTTGT..................................................................................................	21	1	1	38.00	38	8	5	10	1	0	6	4	4	0	0	0	0
..................................................................................................CGAATTCGGTTCTAGAGAGGTTT........................................................	23	1	1	38.00	38	8	5	2	14	7	0	0	2	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGGGAGGTT.........................................................	22	1	1	37.00	37	7	16	11	1	0	0	0	0	2	0	0	0
..................................................................................................CAAACTCGGTTCTAGAGAGGTTT........................................................	23	1	1	37.00	37	6	0	2	16	4	2	0	7	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGTTT.........................................................	22	1	1	36.00	36	12	4	6	6	0	6	0	1	1	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGGGGTT.........................................................	22	1	1	36.00	36	9	12	14	0	0	0	0	0	1	0	0	0
..........................................................ACCCTGTAGATCTGAATTTGT..................................................................................................	21	1	1	35.00	35	5	11	17	0	1	0	0	1	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGA...............................................................	16	0	1	34.00	34	0	0	0	0	0	10	5	17	2	0	0	0
..........................................................ACCCTGTACATCCGAATTTGTT.................................................................................................	22	1	1	34.00	34	5	1	1	3	11	9	3	1	0	0	0	0
..........................................................ACCCTGTAAATCCGAATTTGTT.................................................................................................	22	1	1	34.00	34	11	4	1	3	6	3	3	3	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA......................................................	25	2	1	33.00	33	3	3	1	4	0	10	2	7	3	0	0	0
..................................................................................................CAGATTCGGTTCTAGAGAGGTTT........................................................	23	1	1	33.00	33	7	7	4	8	4	0	1	1	0	0	0	1
..........................................................ACCCTGTAGATCCGAATTTGTTC................................................................................................	23	1	1	33.00	33	6	6	0	7	3	5	5	1	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGACGTTT........................................................	23	1	1	33.00	33	19	4	1	3	2	1	1	1	1	0	0	0
...........................................................ACCCTTAGATCCGAATTTGTT.................................................................................................	21	3	1	33.00	33	0	0	0	0	0	20	4	6	3	0	0	0
..................................................................................................CAAATTCTGTTCTAGAGAGGTTT........................................................	23	1	1	32.00	32	11	3	2	12	1	1	1	1	0	0	0	0
.........................................................TACCCTGTAGATCCGAATT.....................................................................................................	19	0	1	31.00	31	4	2	2	0	0	0	1	0	22	0	0	0
..........................................................ACCCTGTAGATTCGAATTTGT..................................................................................................	21	1	1	30.00	30	1	6	3	6	0	3	8	2	1	0	0	0
..................................................................................................CAAATTCGGTTCTGGAGAGGT..........................................................	21	1	1	30.00	30	1	17	11	1	0	0	0	0	0	0	0	0
..........................................................ACCCTGTAGAACCGAATTTGTT.................................................................................................	22	1	1	29.00	29	13	4	0	1	5	0	3	1	2	0	0	0
..................................................................................................CAAATTCGGATCTAGAGAGGTTT........................................................	23	1	1	28.00	28	11	1	1	12	2	0	1	0	0	0	0	0
..................................................................................................AAAATTCGGTTCTAGAGAGGTTT........................................................	23	1	1	28.00	28	10	3	0	1	8	0	3	2	1	0	0	0
.........................................................TACCCTGTAGATCCGAATTTGC..................................................................................................	22	1	1	28.00	28	21	3	4	0	0	0	0	0	0	0	0	0
.........................................................CACCCTGTAGATCCGAATTTGTT.................................................................................................	23	1	1	28.00	28	10	3	2	10	3	0	0	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGAT.........................................................	22	1	1	28.00	28	4	11	8	1	0	2	1	1	0	0	0	0
..........................................................ACCCTGTAGATCCAAATTTGT..................................................................................................	21	1	1	28.00	28	8	11	7	0	0	2	0	0	0	0	0	0
..................................................................................................CAAATTTGGTTCTAGAGAGGTTT........................................................	23	1	1	27.00	27	12	2	0	8	2	1	0	2	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAAAGGTTT........................................................	23	1	1	25.00	25	12	2	1	6	2	1	0	1	0	0	0	0
............................................................CCTGTAGATCCGAATTTGT..................................................................................................	19	0	1	25.00	25	5	8	7	4	0	0	0	1	0	0	0	0
......................................................................................................TTCGGTTCTAGAGAGGTTT........................................................	19	0	1	25.00	25	6	3	2	10	1	0	0	3	0	0	0	0
..................................................................................................CAAATTCGGTTCCAGAGAGGTTT........................................................	23	1	1	25.00	25	8	7	3	1	2	0	0	3	1	0	0	0
..........................................................AAACTGTAGATCCGAATTTGTT.................................................................................................	22	2	1	24.00	24	0	0	0	0	24	0	0	0	0	0	0	0
..........................................................ACCCTGTTGATCCGAATTTGTT.................................................................................................	22	1	1	24.00	24	5	0	1	1	15	0	0	2	0	0	0	0
..................................................................................................CAACTTCGGTTCTAGAGCGGTTT........................................................	23	2	1	24.00	24	0	0	0	23	1	0	0	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGTCT........................................................	23	1	1	24.00	24	6	9	1	2	3	2	0	1	0	0	0	0
..................................................................................................TAAATTCGGTTCTAGAGAGGTT.........................................................	22	1	1	24.00	24	2	9	2	5	1	0	1	2	2	0	0	0
..........................................................ACCCTGTAGATCCGAATTGTT..................................................................................................	21	2	1	23.00	23	4	2	2	1	1	1	9	3	0	0	0	0
..................................................................................................CAGATTCGGTTCTAGAGAGGTT.........................................................	22	1	1	23.00	23	2	8	10	1	0	1	0	1	0	0	0	0
..........................................................ACCCTGTAGATCCGAATTTGA..................................................................................................	21	1	1	23.00	23	0	11	10	0	0	1	1	0	0	0	0	0
.................................................................................................TCAAATTCGGTTCTAGAGAGGTTT........................................................	24	1	1	23.00	23	0	0	0	23	0	0	0	0	0	0	0	0
..........................................................ATTCTGTAGATCCGAATTTGTT.................................................................................................	22	2	1	23.00	23	0	0	0	0	0	5	13	1	4	0	0	0
..................................................................................................CAAATTCGGTTCTACAGAGGTT.........................................................	22	1	1	23.00	23	7	10	4	0	0	1	1	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAG..............................................................	17	0	1	23.00	23	0	0	0	0	0	14	2	7	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGCTTT........................................................	23	1	1	22.00	22	9	6	4	2	0	1	0	0	0	0	0	0
...................................................................................................AAATTCGGTTCTAGAGAGGTTTT.......................................................	23	1	1	22.00	22	2	0	0	19	0	0	1	0	0	0	0	0
..........................................................ACCCTGGAGATCCGGATTTGTT.................................................................................................	22	2	1	22.00	22	0	0	0	0	22	0	0	0	0	0	0	0
.........................................................TGCCCTGTAGATCCGAATTTGT..................................................................................................	22	1	1	22.00	22	0	10	10	0	0	0	0	0	2	0	0	0
..........................................................ACCCTGTAGATCCGAAGTTGTT.................................................................................................	22	1	1	22.00	22	2	1	0	5	13	0	0	1	0	0	0	0
..................................................................................................CAAATTCCGTTCTAGAGAGGTTT........................................................	23	1	1	22.00	22	3	0	1	13	0	1	0	4	0	0	0	0
..........................................................ACCCTGTAGACCCGAATTTGT..................................................................................................	21	1	1	21.00	21	6	8	2	1	1	0	3	0	0	0	0	0
.....................................................................................................ATTCGGTTCTAGAGAGGTTT........................................................	20	0	1	21.00	21	6	1	0	12	0	0	0	2	0	0	0	0
.................................................................................................ACAAATTCGGTTCTAGAGAGGTT.........................................................	23	0	1	21.00	21	4	5	4	3	1	1	1	2	0	0	0	0
..........................................................ACCCTGTAGATCCGAAATTGTT.................................................................................................	22	1	1	21.00	21	9	1	0	2	3	3	1	2	0	0	0	0
.....................................................CGTGGACCCTGTAGATCCGAATTTGTT.................................................................................................	27	2	1	20.00	20	15	3	2	0	0	0	0	0	0	0	0	0
..........................................................ACCCTGTGGATCCGAATTTGT..................................................................................................	21	1	1	20.00	20	3	7	5	0	1	0	3	0	1	0	0	0
..................................................................................................CAAATTCGGTTCTAGACAGGTT.........................................................	22	1	1	20.00	20	3	8	7	0	0	1	0	1	0	0	0	0
..................................................................................................CGAATTCGGTTCTAGAGAGGTT.........................................................	22	1	1	20.00	20	4	7	4	4	0	0	0	1	0	0	0	0
..........................................................ACACTGTAGATCCGAATTTGT..................................................................................................	21	1	1	20.00	20	5	6	4	0	5	0	0	0	0	0	0	0
..................................................................................................CAAATTTGGTTCTAGAGAGGTT.........................................................	22	1	1	19.00	19	5	6	3	3	0	1	0	1	0	0	0	0
..........................................................ACCCTGTAGGTCCGAATTTGT..................................................................................................	21	1	1	19.00	19	4	4	5	0	3	0	2	1	0	0	0	0
..........................................................ACCCTGTAGCTCCGTATTTGTT.................................................................................................	22	2	1	19.00	19	0	0	0	0	19	0	0	0	0	0	0	0
.................................................................................................CCAAATTCGGTTCTAGAGAGGTTT........................................................	24	1	1	19.00	19	0	0	0	18	1	0	0	0	0	0	0	0
..........................................................ACCCGGTAGATCCGAATTTGTT.................................................................................................	22	1	1	19.00	19	5	3	0	0	9	2	0	0	0	0	0	0
..........................................................ACCCTGTAGATCCGGATTTGT..................................................................................................	21	1	1	19.00	19	5	8	2	0	1	1	1	1	0	0	0	0
..................................................................................................CAAATCCGGTTCTAGAGAGGTTT........................................................	23	1	1	19.00	19	3	2	2	8	1	2	0	1	0	0	0	0
..................................................................................................CAAATTCGGTTCTAAAGAGGTTT........................................................	23	1	1	19.00	19	5	2	7	4	0	0	0	1	0	0	0	0
..........................................................ACCCTGTAGATCCGAATGTGTT.................................................................................................	22	1	1	18.00	18	0	1	0	0	15	0	1	0	1	0	0	0
..........................................................ACTCTGTAGATCCGAATTTGT..................................................................................................	21	1	1	18.00	18	2	5	2	0	1	3	1	4	0	0	0	0
..................................................................................................GAAATTCGGTTCTAGAGAGGTTT........................................................	23	1	1	18.00	18	5	2	0	1	1	2	4	2	1	0	0	0
..........................................................ACCCTGTAGATGCGAATTTGTT.................................................................................................	22	1	1	18.00	18	5	3	1	0	1	1	3	4	0	0	0	0
..........................................................AACCTGTAGATCCGTATTTGTT.................................................................................................	22	2	1	17.00	17	0	0	0	0	17	0	0	0	0	0	0	0
..........................................................ACCCTGTAGATCCGAATTTT...................................................................................................	20	1	1	17.00	17	1	5	5	3	0	2	0	0	1	0	0	0
..........................................................ACCCTGTAGATCCGAATTGGTT.................................................................................................	22	1	1	17.00	17	3	1	0	9	4	0	0	0	0	0	0	0
...................................................................................................AAATTCGGTTCTAGAGAGG...........................................................	19	0	1	17.00	17	0	0	1	15	0	0	0	1	0	0	0	0
..........................................................GCCCTGTAGATCCGAATTTG...................................................................................................	20	1	1	16.00	16	1	5	8	0	0	0	2	0	0	0	0	0
...........................................................CCCTGTAGATCCGAATTTG...................................................................................................	19	0	1	16.00	16	1	1	1	12	0	0	0	0	0	1	0	0
.........................................................TACCCTGTAGATCCGAATTTGA..................................................................................................	22	1	1	16.00	16	0	0	0	0	0	0	1	0	15	0	0	0
..........................................................ACCCTGTAGATCCTAATTTGT..................................................................................................	21	1	1	16.00	16	3	4	2	2	0	3	1	1	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAAGTTT........................................................	23	1	1	16.00	16	5	3	2	2	1	3	0	0	0	0	0	0
..........................................................ACCCAGTAGATCCGAATTTGTT.................................................................................................	22	1	1	16.00	16	5	2	1	0	6	0	0	1	0	0	0	1
..................................................................................................CAAATTCGGTTCTTGAGAGGTTT........................................................	23	1	1	16.00	16	2	2	1	6	2	1	0	2	0	0	0	0
..................................................................................................CAAGTTCGGTTCTAGAGAGGTTT........................................................	23	1	1	15.00	15	5	2	1	3	3	0	1	0	0	0	0	0
..................................................................................................CTAATTCGGTTCTAGAGAGGTTT........................................................	23	1	1	15.00	15	1	2	0	9	2	0	0	1	0	0	0	0
.........................................................TACCCTGTAGATCCGAATTTGTA.................................................................................................	23	1	1	15.00	15	0	1	0	0	0	0	0	0	14	0	0	0
..................................................................................................CAAATTCAGTTCTAGAGAGGTT.........................................................	22	1	1	15.00	15	6	4	3	0	0	1	1	0	0	0	0	0
.........................................................TACCCTGTAGATTCGAATTTGT..................................................................................................	22	1	1	15.00	15	1	0	0	0	0	0	0	0	14	0	0	0
..........................................................ACCCTGTAGATCCGAATTTGTTAAA..............................................................................................	25	2	1	15.00	15	4	5	0	0	0	3	2	1	0	0	0	0
..................................................................................................CAAATTCGTTTCTAGAGAGGTT.........................................................	22	1	1	14.00	14	4	4	2	1	0	3	0	0	0	0	0	0
....................................................................................................AATTCGGTTCTAGAGAGGTT.........................................................	20	0	1	14.00	14	1	1	1	10	0	1	0	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGGGTTT.........................................................	22	2	1	14.00	14	9	1	1	0	0	2	0	1	0	0	0	0
..........................................................ACCCTATAGATCCGAATTTGT..................................................................................................	21	1	1	14.00	14	2	3	5	1	1	0	1	1	0	0	0	0
..........................................................ACCCTGTAGATCCGCATTTGT..................................................................................................	21	1	1	14.00	14	1	2	1	0	9	0	1	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGGTTT.......................................................	24	2	1	14.00	14	5	3	0	6	0	0	0	0	0	0	0	0
..................................................................................................CAAATTCGATTCTAGAGAGGTTT........................................................	23	1	1	13.00	13	4	1	1	4	0	0	1	2	0	0	0	0
..........................................................ACCCTGTAGATCCGAGTTTGT..................................................................................................	21	1	1	13.00	13	0	7	0	1	0	1	3	0	1	0	0	0
..........................................................ACCCTGTAGATCAGAATTTGT..................................................................................................	21	1	1	13.00	13	1	8	2	0	0	1	1	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGT.............................................................	18	1	1	13.00	13	1	4	7	0	1	0	0	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGTGAGGGTT........................................................	23	2	1	13.00	13	0	0	0	12	1	0	0	0	0	0	0	0
.........................................................TACCCTGTAGATCTGAATTTGT..................................................................................................	22	1	1	13.00	13	0	0	0	0	0	0	0	0	13	0	0	0
...................................................................................................AAATTCGGTTCTAGAGAGGGTT........................................................	22	1	1	13.00	13	0	0	0	13	0	0	0	0	0	0	0	0
..........................................................ACCCTGTAGATCCGAAT......................................................................................................	17	0	1	13.00	13	0	0	0	0	0	1	5	3	2	0	0	2
..................................................................................................CAAATTCGGTCCTAGAGAGGTT.........................................................	22	1	1	13.00	13	1	2	6	0	1	0	0	3	0	0	0	0
..........................................................ACCCTGTAGCTCCGCATTTGTT.................................................................................................	22	2	1	13.00	13	0	0	0	0	13	0	0	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGG.............................................................	18	1	1	13.00	13	0	5	8	0	0	0	0	0	0	0	0	0
..........................................................ACCCTGTAGATCCGAATCTGT..................................................................................................	21	1	1	13.00	13	4	1	3	2	1	1	1	0	0	0	0	0
..................................................................................................CAAATTCGGTTCGAGAGAGGTTT........................................................	23	1	1	12.00	12	1	0	0	10	1	0	0	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTTT......................................................	25	1	1	12.00	12	0	1	0	8	1	0	1	0	1	0	0	0
..................................................................................................CAAATTCGGTTCTAGGGAGGT..........................................................	21	1	1	12.00	12	3	6	0	1	1	0	1	0	0	0	0	0
..........................................................ACCCTGTAGATCCGAATTTGTTTTATACT..........................................................................................	29	0	1	12.00	12	5	6	0	0	0	0	1	0	0	0	0	0
..........................................................ACCCTGTAAATCCGAATTTGT..................................................................................................	21	1	1	12.00	12	7	3	1	1	0	0	0	0	0	0	0	0
....................................................CCGTGGACCCTGTAGATCCGAATTTGTT.................................................................................................	28	3	1	12.00	12	7	3	2	0	0	0	0	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGTGGTTT........................................................	23	1	1	12.00	12	2	0	0	1	5	1	0	3	0	0	0	0
..................................................................................................CAACTTCGGTTCTAGAGAGGTT.........................................................	22	1	1	12.00	12	0	0	0	12	0	0	0	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGGA..........................................................	21	1	1	12.00	12	0	5	5	1	0	0	1	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGATGTT.........................................................	22	1	1	12.00	12	0	3	2	6	0	0	1	0	0	0	0	0
..........................................................ACCGTGTAGATCCGAATTTGTT.................................................................................................	22	1	1	11.00	11	4	0	1	1	1	2	1	0	1	0	0	0
..........................................................ACCCTGTAGATCCGAATTTCT..................................................................................................	21	1	1	11.00	11	3	1	6	0	0	0	0	1	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGCGGTT.........................................................	22	1	1	11.00	11	1	0	4	5	0	0	0	1	0	0	0	0
..........................................................ACCCTGTAGCTCCGACTTTGTT.................................................................................................	22	2	1	11.00	11	0	0	0	0	11	0	0	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGTT..........................................................	21	1	1	11.00	11	2	2	1	4	1	0	0	1	0	0	0	0
..................................................................................................CAAATTCGGTTCTATAGAGGT..........................................................	21	1	1	11.00	11	7	2	2	0	0	0	0	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAAGGTTT.........................................................	22	3	2	10.50	21	13	3	0	0	0	3	0	2	0	0	0	0
..................................................................................................CAAATTAGGTTCTAGAGAGGTT.........................................................	22	1	1	10.00	10	0	2	1	7	0	0	0	0	0	0	0	0
..................................................................................................CAAACTCGGTTCTAGAGAGGTT.........................................................	22	1	1	10.00	10	0	2	4	4	0	0	0	0	0	0	0	0
..........................................................ACCCTGTATATCCGAATTTGT..................................................................................................	21	1	1	10.00	10	1	3	1	1	1	2	1	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGGGGT..........................................................	21	1	1	10.00	10	4	3	1	0	1	0	1	0	0	0	0	0
..........................................................ACCCTGTAGATCCGAATTTGTTTTAT.............................................................................................	26	0	1	10.00	10	2	2	6	0	0	0	0	0	0	0	0	0
.........................................................TACCCTGTAGATCCGAAT......................................................................................................	18	0	1	10.00	10	2	0	0	0	0	0	0	0	8	0	0	0
..................................................................................................CAAATTCGGATCTAGAGAGGTT.........................................................	22	1	1	10.00	10	3	3	2	2	0	0	0	0	0	0	0	0
..........................................................ACACTGTAGATCCGTATTTGTT.................................................................................................	22	2	1	10.00	10	0	0	0	0	10	0	0	0	0	0	0	0
..........................................................ACCCTGGAGATCCGCATTTGTT.................................................................................................	22	2	1	10.00	10	0	0	0	0	10	0	0	0	0	0	0	0
.........................................................TACCCTGTAGATTTGAATTTGT..................................................................................................	22	2	1	10.00	10	0	0	0	0	0	0	0	1	9	0	0	0
..........................................................ACCTTGTAGATCCGAATTTGT..................................................................................................	21	1	1	10.00	10	3	4	1	0	0	0	1	1	0	0	0	0
..........................................................ACCCTGGAGATCCGAATTTGGT.................................................................................................	22	2	1	10.00	10	0	0	1	0	9	0	0	0	0	0	0	0
..........................................................ACCCTGTAGATCGGAATTTGT..................................................................................................	21	1	1	10.00	10	0	8	2	0	0	0	0	0	0	0	0	0
.........................................................CACCCTGTAGATCCGAATTTGT..................................................................................................	22	1	1	10.00	10	0	1	2	2	0	0	0	1	4	0	0	0
..................................................................................................CCAATTCGGTTCTAGAGAGGTTT........................................................	23	1	1	10.00	10	1	0	0	1	6	2	0	0	0	0	0	0
.............................................................CTGTAGATCCGAATTTGT..................................................................................................	18	0	1	10.00	10	2	3	2	0	0	1	0	1	0	0	1	0
..........................................................ACCCTGTAGGTCCGGATTTGTT.................................................................................................	22	2	1	9.00	9	0	0	0	0	9	0	0	0	0	0	0	0
..........................................................ACCCTGTAGATCCGAATTTTTTT................................................................................................	23	1	1	9.00	9	1	1	0	3	0	2	1	1	0	0	0	0
..........................................................ACCCTGTAGATCCGAATTGG...................................................................................................	20	1	1	9.00	9	1	6	2	0	0	0	0	0	0	0	0	0
..................................................................................................CAAATTCGGTTCCAGAGAGGTT.........................................................	22	1	1	9.00	9	2	2	3	0	0	2	0	0	0	0	0	0
..................................................................................................CAAATTGGGTTCTAGAGAGGTTT........................................................	23	1	1	9.00	9	3	4	1	1	0	0	0	0	0	0	0	0
..........................................................ACCCTGTAGATCCGAATATGTT.................................................................................................	22	1	1	9.00	9	3	2	0	0	1	0	3	0	0	0	0	0
...................................................................................................CAATTCGGTTCTAGAGAGGTTT........................................................	22	1	1	9.00	9	2	0	0	5	0	1	1	0	0	0	0	0
..........................................................ACCCTGTAGATCCGAATTCGT..................................................................................................	21	1	1	9.00	9	2	5	2	0	0	0	0	0	0	0	0	0
.........................................................AACCCTGTAGATCCGAATTTGT..................................................................................................	22	1	1	9.00	9	0	0	0	0	0	0	0	0	9	0	0	0
.........................................................GACCCTGTAGATCCGAATTTGT..................................................................................................	22	1	1	9.00	9	0	0	0	0	0	0	0	0	9	0	0	0
..........................................................ACACTGTAGATACGAATTTGTT.................................................................................................	22	2	1	9.00	9	0	0	0	0	9	0	0	0	0	0	0	0
.........................................................TACCCTGTAGATCCGAATTTGAA.................................................................................................	23	2	1	9.00	9	1	0	0	0	0	0	0	0	8	0	0	0
..........................................................ACCCTGTAGATCCGAATTTGTTTT...............................................................................................	24	0	1	9.00	9	1	1	0	3	0	0	1	0	1	2	0	0
...........................................................CCCTGTCGATCCGAATTTGTT.................................................................................................	21	1	1	9.00	9	0	0	0	9	0	0	0	0	0	0	0	0
..................................................................................................CAAATTCGGTGCTAGAGAGGTTT........................................................	23	1	1	9.00	9	1	1	1	0	2	0	4	0	0	0	0	0
...................................................................................................AAATTCGGTTCTAGAGAG............................................................	18	0	1	9.00	9	0	0	0	3	0	0	0	0	0	3	3	0
..........................................................AACCTGTAGATCCGAATTTGT..................................................................................................	21	1	1	9.00	9	0	3	1	0	4	0	1	0	0	0	0	0
.........................................................GACCCTGTAGATCCGAATTTGTT.................................................................................................	23	1	1	9.00	9	0	0	0	9	0	0	0	0	0	0	0	0
..................................................................................................CAACTTCGGTTCGAGAGCGGTTT........................................................	23	3	1	8.00	8	0	0	0	8	0	0	0	0	0	0	0	0
..........................................................ACCCTGGAGATCTGAATTTGTT.................................................................................................	22	2	1	8.00	8	3	0	1	0	4	0	0	0	0	0	0	0
..................................................................................................GAAATTCGGTTCTAGAGAGGTT.........................................................	22	1	1	8.00	8	0	2	0	1	1	1	2	0	1	0	0	0
..........................................................AGCCTGTAGATCCGAATTTGT..................................................................................................	21	1	1	8.00	8	1	3	3	1	0	0	0	0	0	0	0	0
..........................................................TCCCTGTAGATCCGAATTTGT..................................................................................................	21	1	1	8.00	8	1	1	1	2	0	0	3	0	0	0	0	0
..........................................................ACACTGTAGATCCGGATTTGTT.................................................................................................	22	2	1	8.00	8	0	0	0	0	8	0	0	0	0	0	0	0
..................................................................................................CAAATTCGGTTCTAGAGAGATTT........................................................	23	1	1	8.00	8	4	1	0	2	0	1	0	0	0	0	0	0

AAATCACTTTATCGCTTGCCATAAGCTACACTTTTTCGATGGATATTGAACCACACAAACCTCTCTAGAACCGAATTTGTCCTTAAAGCTAGTATAAAACAAATTCGGATCTACAGGGTAGACGTGGAGCAAACTGATGAGGAACAGTCGCTGGGGCGAAATGAACTCCGCTGGGCA ***************************************....(((..(((((...(((.((.((((.(((((((((((((............))))))))))))).)))).)))))...)))))..)))..*****************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	O002 Head
...................................................................................................CAAATTCGGTTCTAGAGGTT..........................................................	20	3	7	2.57	18	0
..........................................ATATTGAACCACACAAAC.....................................................................................................................	18	0	1	1.00	1	1
...........................................................CCCCTCTAGAACCGAATGTGTT................................................................................................	22	3	1	1.00	1	0
..................................................................................................................................AAAATGATGAGGATCAGTCGC..........................	21	2	1	1.00	1	0
...........................................................ACTCTTTAGAACCGAATTTGTT................................................................................................	22	3	2	0.50	1	0
...................................................................................................CAAATTCGGTTCTAGAAGGT..........................................................	20	3	6	0.33	2	0
...................................................................................................CAAATTCGGATCTAGAGAGAA.........................................................	21	3	6	0.17	1	0

Species	Coordinate	ID	Alignment
droSim3	3R:2666310-2666486 -	dsi-mir-10	TGCCCAG---------CGGAGT-----------TCATTTCGCC-CCAGCG-----A---CTGT----TCCTC-A--------------------------------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAAAAAG-TG-------------TAGCTTATGGCAAGCG---ATAAAGTGATTT
droSec2	scaffold_6:2726399-2726575 -	dse-mir-10	TGCCCAG---------CGGAGT-----------TCATTTCGCC-CCAGCG-----A---CTGT----TCCTC-A--------------------------------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAAAAAG-TG-------------TAGCTGATGGCAAGCG---ATAAAGTGATTT
dm3	chr3R:2635178-2635354 -	dme-mir-10	TGCCTAG---------CGGACT-----------TCATTTCGCC-CCAGCG-----A---CTGT----TCCTC-A--------------------------------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAAAAAG-TG-------------TTGCTGATGGCAAGCG---GAAAAGTGATTT
droEre2	scaffold_4770:2882520-2882695 -	der-mir-10	TGCCCAG---------CGCAGT-----------TCATTTCGCC-CCTCCG-----A---C-GT----TCCTC-A--------------------------------TCAGTTTGCTCTACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGGAAAAG-TG-------------AAGCTGATGTCAAGCG---GAAAAGTGATTT
droYak3	3R:7777948-7778131 +	dya-mir-10	TGCCCAG---------CGAAGT-----------TCATTTCGCC-CCTGCGACGA-ACTGACGT----TCCTC-A--------------------------------TCACTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGGAAAAG-TG-------------AAGCTGATGTCAAGCG---GAAAAGTGATGT
droEug1	scf7180000409886:257292-257484 +		TGCTCAC---------CTGAGC-----------TCATTCAGCCGCCTGCG-----A---CTGTTAGGTCTCC-T--------------------------------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACTCTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTTCATCGATAGCCGAAT---ACGGAAGTGAAATCAAAAATAAGTG---AAAAAGTGAATT
droBia1	scf7180000302155:2026079-2026266 +		TGCGCGCC--------CTGAGC-----------TCCCTTCGCC-CCTGCG-----A---CTGC----TCGCC-T--------------------------------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTGTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTCCATCGTAAAACGCAT---TTT-GAGTGAAAAAGAAATGGAGTG---ATAAAGTGAACC
droTak1	scf7180000415671:411398-411584 +		TGCCCACC--------CTGAGT-----------TCACTTCGCC-CCTGCG-----A---CTGC----TCTCC-T--------------------------------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGATAAAA-CAT---TTA-AAGTGAAACTGAAATGAAGTG---AAAAAGTGAAAC
droEle1	scf7180000491278:1424337-1424525 -		TGCTCAC---------CTCAGT-----------TCATTTCGCC-GCTGCG-----A---CTGC----TCCCC-T--------------------------------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCAGCGAAATAG-CATGATTTC-AAATGAAGCCGAAATCAAGTG---ACAAAGTGAATT
droRho1	scf7180000777432:2214-2399 +		TGCTCAC---------CTCCGT-----------TCATTTCACC-CATGCGACGCGA---CTGT----TCTCC-T--------------------------------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTCCAATATCCATCGATAAAT-CAA---------AAGAAGCCGGAATCAAGTG---AAAAAGTGAATT
droFic1	scf7180000453835:71926-72119 -		TGCTCAC---------CTGAGT----CACTGCGTCATTTCAAC-CCGGCG-----A---CTGC----TCCCC-TC---------------CAGTT-----------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTCCATCGAAAAAG-TG--ATCT-------CAGCTGATATTAAACTTTACCAAAGTGA---
droKik1	scf7180000302639:2316878-2317040 +		TGCTCACCTGCCTCACCTGACT-----------TCATTATCCC-GCAGCG-----G---CTGT----TCAGC-G--------------------------------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCAACGTAAAAT-CAT---------------------------------------AATT
droAna3	scaffold_13340:5417309-5417487 +	dan-mir-10	TGCCCACC-GCCTCACCCAACACCGTCAC------------AC-CTTGCG-----G---CTGT--GCTCCTA-T--------------------------------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATTTCCATCGTAAAAT-AAAAGT--------GTT--TA-------------ATGAAGTGATTG
droBip1	scf7180000396708:3396401-3396551 -		TGCCTGCC----TTGCCCGACACCGTCAC------------AC-CTTGCA-----A---CTGT----TCCTA-T--------------------------------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGTAAAAG-----------------------------------------------
dp5	2:19739416-19739628 +	dps-mir-10	TGCTCACCT------CTCGGCGCCCTCGG------------GC-ATGG-----CAC---CGG---GC-TCCACACCCCGTCCTCTGCAGGCAGTTTTTTTGGTTCTCAAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTACAACGAAAACA-GATAGT--------TATTAAAGTGAAAAGTG---ATAAAGTG----
droPer2	scaffold_3:2487609-2487821 +	dpe-mir-10	TGCTCACCT------CTCGGCGCCCTCGG------------GC-TTGG-----CAC---CGG---GC-TCCACACCCCGTTCTCTGCAGGCAGTTTTTTTGGTTCTCAAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTACAACGAAAACA-GATAGT--------TATTAAAGTGAAAAGTG---ATAAAGTG----
droWil2	scf2_1100000004902:12007283-12007422 -	dwi-mir-10	T----------------------------------------------------------------------------------------------------------CGCTTTGTTCTACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTTTTTAAGGACAAATTCGGTTCTAGAGAGGTTTAAGTGGTTCAATGTTCTACAAACAAACCAA---AAA-AAGTAACAACAATAACAAGTG---ACAA--------
droVir3	scaffold_13047:6092054-6092162 +	dvi-mir-10	T----------------------------------------------------------------------------------------------------------CACTTTGTTCCACGTCCACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTCTGTGGCTCATTGTCCAGCGAATATG-TG--------------------------------------------
droMoj3	scaffold_6540:16502903-16503004 +	dmo-mir-10	CA-----------------------------------------------------------------------------------------------------------CTCTGTTCCACGTCTACCCTGTAGATCCGAATTTGTTGTACCATAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTATGTGGCTCATTGTCCAGCGAA---------------------------------------------------
droGri2	scaffold_14906:11443546-11443656 +	dgr-mir-10	-------------------------------------------------------A---CTGT----T-----T--------------------------------TCACTTTGTTCCACGTCTACCCTGTAGATCCGAATTTGTTGTACACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGCTCAATGCCCACCGAAA--------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim3

TGCCCAG---------CGGAGT-----------TCATTTCGCC-CCAGCG-----A---CTGT----TCCTC-A--------------------------------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAAAAAG-TG-------------TAGCTTATGGCAAGCG---ATAAAGTGATTT	Size	Hit Count	Total Norm	Total	V044 Embryo	M023 Head	M024 Male-body	M025 Embryo	O001 Testis	O002 Head	M053 Female-body	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary
............................................................................................................................ACCCTGTAGATCCGAATTTGTT...................................................................................................................	22	1	216269.00	216269	26268	11214	37469	88348	774	344	9099	16516	2920	12743	10253	321
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT.........................................................................	23	1	95859.00	95859	3740	8051	17723	31242	2151	1096	16053	1669	434	6866	6748	86
............................................................................................................................ACCCTGTAGATCCGAATTTGT....................................................................................................................	21	1	44315.00	44315	491	10283	17348	9132	326	179	851	2422	432	1649	1176	26
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT..........................................................................	22	1	37477.00	37477	278	10364	13682	5654	182	106	2192	1262	299	1986	1470	2
............................................................................................................................ACCCTGTAGATCCGAATTTG.....................................................................................................................	20	1	9026.00	9026	11	3614	3379	557	723	261	162	138	31	106	43	1
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT...........................................................................	21	1	7734.00	7734	104	934	2072	1657	324	139	1035	475	97	516	375	6
...........................................................................................................................TACCCTGTAGATCCGAATTTGT....................................................................................................................	22	1	4010.00	4010	5	85	130	453	2	3	1	52	3212	37	30	0
............................................................................................................................ACCCTGTAGATCCGAATT.......................................................................................................................	18	1	2345.00	2345	1	286	420	415	882	313	6	8	3	5	5	1
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGG............................................................................	20	1	1711.00	1711	26	209	404	83	294	169	239	126	26	80	54	1
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT.........................................................................	22	1	1412.00	1412	18	8	18	37	6	2	1278	3	0	20	22	0
.............................................................................................................................CCCTGTAGATCCGAATTTGTT...................................................................................................................	21	1	1290.00	1290	3	81	124	249	1	0	818	3	1	5	5	0
............................................................................................................................ACCCTGTAGATCCGAATTTGTTT..................................................................................................................	23	1	1286.00	1286	167	58	353	335	78	34	130	70	13	27	17	4
.....................................................................................................................................................................CAAATTCGGTTCTAGAGA..............................................................................	18	1	1283.00	1283	3	7	20	5	803	381	14	5	1	16	28	0
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAG.............................................................................	19	1	1208.00	1208	6	19	23	5	706	333	31	28	6	24	26	1
............................................................................................................................ACCCTGTAGATCCGAATTT......................................................................................................................	19	1	1034.00	1034	4	173	234	64	368	137	8	17	8	9	12	0
.............................................................................................................................CCCTGTAGATCCGAATTTGTTT..................................................................................................................	22	1	364.00	364	8	57	89	199	2	0	7	1	0	0	1	0
................................................................................................................................TGTAGATCCGAATTTGTT...................................................................................................................	18	1	324.00	324	1	22	53	196	0	0	1	3	3	34	8	3
...........................................................................................................................TACCCTGTAGATCCGAATTTG.....................................................................................................................	21	1	285.00	285	1	21	14	26	0	1	1	4	215	1	1	0
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT..........................................................................	21	1	264.00	264	4	11	19	11	1	1	203	2	1	5	6	0
..............................................................................................................................CCTGTAGATCCGAATTTGTT...................................................................................................................	20	1	181.00	181	10	12	32	94	0	0	29	1	0	0	3	0
...........................................................................................................................TACCCTGTAGATCCGAATTT......................................................................................................................	20	1	174.00	174	0	1	0	0	0	0	0	3	170	0	0	0
.............................................................................................................................CCCTGTAGATCCGAATTTGT....................................................................................................................	20	1	165.00	165	0	24	31	16	0	0	84	0	8	2	0	0
...........................................................................................................................TACCCTGTAGATCCGAATTTGTT...................................................................................................................	23	1	145.00	145	4	20	25	43	0	0	8	6	30	6	3	0
...............................................................................................................................CTGTAGATCCGAATTTGTT...................................................................................................................	19	1	110.00	110	4	7	13	62	0	0	6	1	1	6	6	4
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGT...........................................................................	20	1	106.00	106	0	1	2	6	1	0	91	1	1	2	1	0
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT.........................................................................	21	1	99.00	99	0	0	1	2	2	1	90	0	0	0	3	0
.................................................................................................................................GTAGATCCGAATTTGTT...................................................................................................................	17	1	73.00	73	0	0	0	0	0	0	0	26	0	32	8	7
....................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT.........................................................................	24	1	61.00	61	1	2	3	27	1	2	13	0	2	5	5	0
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG........................................................................	24	1	50.00	50	0	5	5	16	4	0	15	0	0	1	4	0
.....................................................................................................................................................................CAAATTCGGTTCTAGA................................................................................	16	1	34.00	34	0	0	0	0	0	0	0	5	2	10	17	0
...........................................................................................................................TACCCTGTAGATCCGAATT.......................................................................................................................	19	1	31.00	31	0	2	2	4	0	0	0	1	22	0	0	0
..............................................................................................................................CCTGTAGATCCGAATTTGT....................................................................................................................	19	1	25.00	25	0	7	8	5	0	0	4	0	0	0	1	0
.........................................................................................................................................................................TTCGGTTCTAGAGAGGTTT.........................................................................	19	1	25.00	25	1	2	3	6	0	0	10	0	0	0	3	0
.....................................................................................................................................................................CAAATTCGGTTCTAGAG...............................................................................	17	1	23.00	23	0	0	0	0	0	0	0	2	0	14	7	0
........................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT.........................................................................	20	1	21.00	21	0	0	1	6	0	0	12	0	0	0	2	0
....................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTT..........................................................................	23	1	21.00	21	1	4	5	4	0	0	3	1	0	1	2	0
......................................................................................................................................................................AAATTCGGTTCTAGAGAGG............................................................................	19	1	17.00	17	0	1	0	0	0	0	15	0	0	0	1	0
.............................................................................................................................CCCTGTAGATCCGAATTTG.....................................................................................................................	19	1	16.00	16	0	1	1	1	1	0	12	0	0	0	0	0
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGTT..........................................................................	20	1	14.00	14	0	1	1	1	0	0	10	0	0	1	0	0
............................................................................................................................ACCCTGTAGATCCGAAT........................................................................................................................	17	1	13.00	13	0	0	0	0	0	0	0	5	2	1	3	2
............................................................................................................................ACCCTGTAGATCCGAATTTGTTTTATACT............................................................................................................	29	1	12.00	12	0	0	6	5	0	0	0	1	0	0	0	0
............................................................................................................................ACCCTGTAGATCCGAATTTGTTTTAT...............................................................................................................	26	1	10.00	10	0	6	2	2	0	0	0	0	0	0	0	0
...........................................................................................................................TACCCTGTAGATCCGAAT........................................................................................................................	18	1	10.00	10	0	0	0	2	0	0	0	0	8	0	0	0
...............................................................................................................................CTGTAGATCCGAATTTGT....................................................................................................................	18	1	10.00	10	0	2	3	2	0	1	0	0	0	1	1	0
............................................................................................................................ACCCTGTAGATCCGAATTTGTTTT.................................................................................................................	24	1	9.00	9	0	0	1	1	2	0	3	1	1	0	0	0
......................................................................................................................................................................AAATTCGGTTCTAGAGAG.............................................................................	18	1	9.00	9	0	0	0	0	3	3	3	0	0	0	0	0

droSec2

TGCCCAG---------CGGAGT-----------TCATTTCGCC-CCAGCG-----A---CTGT----TCCTC-A--------------------------------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAAAAAG-TG-------------TAGCTGATGGCAAGCG---ATAAAGTGATTT	Size	Hit Count	Total Norm	Total	V113 Male-body	V114 Embryo	V115 Head	M054 Female-body
............................................................................................................................ACCCTGTAGATCCGAATTTGTT...................................................................................................................	22	1	161175.00	161175	77073	38909	9886	35307
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT.........................................................................	23	1	97296.00	97296	37344	19707	4159	36086
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT..........................................................................	22	1	19300.00	19300	9706	2042	1421	6131
............................................................................................................................ACCCTGTAGATCCGAATTTGT....................................................................................................................	21	1	14501.00	14501	8806	897	1113	3685
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT...........................................................................	21	1	12774.00	12774	6992	1592	793	3397
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGG............................................................................	20	1	5074.00	5074	2945	253	546	1330
.............................................................................................................................CCCTGTAGATCCGAATTTGTT...................................................................................................................	21	1	3466.00	3466	24	16	6	3420
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT.........................................................................	22	1	3265.00	3265	284	119	24	2838
............................................................................................................................ACCCTGTAGATCCGAATTTGTTT..................................................................................................................	23	1	1749.00	1749	1046	193	156	354
............................................................................................................................ACCCTGTAGATCCGAATTTG.....................................................................................................................	20	1	1605.00	1605	793	54	115	643
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT..........................................................................	21	1	534.00	534	53	13	6	462
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAG.............................................................................	19	1	385.00	385	144	69	40	132
.............................................................................................................................CCCTGTAGATCCGAATTTGT....................................................................................................................	20	1	372.00	372	6	0	0	366
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGT...........................................................................	20	1	311.00	311	34	6	5	266
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT.........................................................................	21	1	239.00	239	30	10	0	199
..............................................................................................................................CCTGTAGATCCGAATTTGTT...................................................................................................................	20	1	176.00	176	20	23	1	132
......................................................................................................................................................................AAATTCGGTTCTAGAGAGG............................................................................	19	1	117.00	117	21	0	1	95
............................................................................................................................ACCCTGTAGATCCGAATTT......................................................................................................................	19	1	84.00	84	11	14	15	44
.............................................................................................................................CCCTGTAGATCCGAATTTGTTT..................................................................................................................	22	1	80.00	80	17	13	7	43
...........................................................................................................................TACCCTGTAGATCCGAATTTGT....................................................................................................................	22	1	77.00	77	37	13	9	18
.............................................................................................................................CCCTGTAGATCCGAATTTG.....................................................................................................................	19	1	71.00	71	0	0	0	71
..................................................................................................................................................TTATACTAGCT-TTAAGGA................................................................................................	18	1	66.00	66	0	65	1	0
.....................................................................................................................................................................CAAATTCGGTTCTAGAGA..............................................................................	18	1	66.00	66	2	41	5	18
...........................................................................................................................TACCCTGTAGATCCGAATTTGTT...................................................................................................................	23	1	59.00	59	20	13	2	24
....................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT.........................................................................	24	1	58.00	58	8	9	3	38
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG........................................................................	24	1	50.00	50	4	4	0	42
...............................................................................................................................CTGTAGATCCGAATTTGTT...................................................................................................................	19	1	48.00	48	12	6	1	29
............................................................................................................................ACCCTGTAGATCCGAATT.......................................................................................................................	18	1	46.00	46	0	26	5	15
........................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT.........................................................................	20	1	36.00	36	9	3	0	24
................................................................................................................................TGTAGATCCGAATTTGTT...................................................................................................................	18	1	36.00	36	12	16	0	8
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGTT..........................................................................	20	1	29.00	29	8	0	0	21
..............................................................................................................................CCTGTAGATCCGAATTTGT....................................................................................................................	19	1	26.00	26	1	1	1	23
.........................................................................................................................................................................TTCGGTTCTAGAGAGGTTT.........................................................................	19	1	24.00	24	0	1	0	23
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGT...........................................................................	19	1	22.00	22	9	1	0	12
.......................................................................................................................................................................AATTCGGTTCTAGAGAGG............................................................................	18	1	20.00	20	1	3	0	16
..........................................................................................................................................................................TCGGTTCTAGAGAGGTTT.........................................................................	18	1	18.00	18	0	0	0	18
......................................................................................................................................................................AAATTCGGTTCTAGAGAG.............................................................................	18	1	13.00	13	1	0	0	12

droEre2

TGCCCAG---------CGCAGT-----------TCATTTCGCC-CCTCCG-----A---C-GT----TCCTC-A--------------------------------TCAGTTTGCTCTACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGGAAAAG-TG-------------AAGCTGATGTCAAGCG---GAAAAGTGATTT	Size	Hit Count	Total Norm	Total	V040 Embryo	V060 Head	V107 Male-body	V108 Head	M055 Female-body	M057 Embryo
............................................................................................................................ACCCTGTAGATCCGAATTTGTT...................................................................................................................	22	1	238423.00	238423	10865	948	102365	12522	48903	62820
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT.........................................................................	23	1	130610.00	130610	1450	915	26614	7469	75348	18814
............................................................................................................................ACCCTGTAGATCCGAATTTGT....................................................................................................................	21	1	18088.00	18088	294	163	9770	1222	4161	2478
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT..........................................................................	22	1	16472.00	16472	149	286	4892	1884	7019	2242
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT.........................................................................	22	1	6333.00	6333	6	3	307	45	5926	46
.............................................................................................................................CCCTGTAGATCCGAATTTGTT...................................................................................................................	21	1	4621.00	4621	0	0	12	11	4584	14
............................................................................................................................ACCCTGTAGATCCGAATTTGTTT..................................................................................................................	23	1	4583.00	4583	77	17	2259	313	1445	472
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT...........................................................................	21	1	2492.00	2492	25	60	1109	292	879	127
............................................................................................................................ACCCTGTAGATCCGAATTTG.....................................................................................................................	20	1	1560.00	1560	7	16	800	95	627	15
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGG............................................................................	20	1	1396.00	1396	8	28	731	190	427	12
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT..........................................................................	21	1	606.00	606	0	1	61	9	531	4
.............................................................................................................................CCCTGTAGATCCGAATTTGT....................................................................................................................	20	1	379.00	379	0	0	0	2	376	1
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAG.............................................................................	19	1	345.00	345	5	5	190	30	111	4
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT.........................................................................	21	1	321.00	321	0	1	11	3	295	11
..............................................................................................................................CCTGTAGATCCGAATTTGTT...................................................................................................................	20	1	241.00	241	4	1	18	14	192	12
.............................................................................................................................CCCTGTAGATCCGAATTTGTTT..................................................................................................................	22	1	141.00	141	2	0	2	0	136	1
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG........................................................................	24	1	101.00	101	0	2	14	4	81	0
............................................................................................................................ACCCTGTAGATCCGAATTT......................................................................................................................	19	1	91.00	91	1	1	20	14	53	2
.....................................................................................................................................................................CAAATTCGGTTCTAGAGA..............................................................................	18	1	86.00	86	9	1	15	26	27	8
........................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT.........................................................................	20	1	77.00	77	2	0	9	1	59	6
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGT...........................................................................	20	1	67.00	67	0	0	8	2	56	1
....................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT.........................................................................	24	1	66.00	66	2	2	9	3	44	6
............................................................................................................................ACCCTGTAGATCCGAATTTGTTTT.................................................................................................................	24	1	43.00	43	1	0	24	4	11	3
.........................................................................................................................................................................TTCGGTTCTAGAGAGGTTT.........................................................................	19	1	41.00	41	0	0	2	0	33	6
......................................................................................................................................................................AAATTCGGTTCTAGAGAGG............................................................................	19	1	38.00	38	0	0	16	1	21	0
...........................................................................................................................TACCCTGTAGATCCGAATTTGTT...................................................................................................................	23	1	35.00	35	0	0	0	0	32	3
.............................................................................................................................CCCTGTAGATCCGAATTTG.....................................................................................................................	19	1	34.00	34	0	0	0	0	34	0
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGTT..........................................................................	20	1	32.00	32	0	0	2	0	30	0
...............................................................................................................................CTGTAGATCCGAATTTGTT...................................................................................................................	19	1	25.00	25	1	0	4	4	16	0
................................................................................................................................TGTAGATCCGAATTTGTT...................................................................................................................	18	1	25.00	25	0	0	11	4	9	1
............................................................................................................................ACCCTGTAGATCCGAATT.......................................................................................................................	18	1	25.00	25	0	0	1	12	8	4
..........................................................................................................................................................................TCGGTTCTAGAGAGGTTT.........................................................................	18	1	20.00	20	0	0	0	0	20	0
..............................................................................................................................CCTGTAGATCCGAATTTGT....................................................................................................................	19	1	16.00	16	0	0	2	0	14	0

droYak3

TGCCCAG---------CGAAGT-----------TCATTTCGCC-CCTGCGACGA-ACTGACGT----TCCTC-A--------------------------------TCACTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGGAAAAG-TG-------------AAGCTGATGTCAAGCG---GAAAAGTGATGT	Size	Hit Count	Total Norm	Total	V046 Embryo	V052 Head	V120 Male-body	V058 Head	M026 Head	M043 Female-body	M056 Embryo
............................................................................................................................ACCCTGTAGATCCGAATTTGTT...................................................................................................................	22	1	803218.00	803218	19593	595	16585	1515	4626	19990	740314
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT.........................................................................	23	3	71150.33	213451	2727	586	15257	1915	3719	52642	136605
............................................................................................................................ACCCTGTAGATCCGAATTTGT....................................................................................................................	21	1	30913.00	30913	457	173	1244	282	2559	1883	24315
............................................................................................................................ACCCTGTAGATCCGAATTTGTTT..................................................................................................................	23	1	8319.00	8319	179	8	344	21	52	464	7251
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT..........................................................................	22	3	6970.00	20910	168	160	3402	478	2345	5805	8552
.............................................................................................................................CCCTGTAGATCCGAATTTGTT...................................................................................................................	21	1	2093.00	2093	7	0	7	1	16	1864	198
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT.........................................................................	22	3	1530.67	4592	16	3	89	13	3	4141	327
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT...........................................................................	21	3	1333.00	3999	34	49	1335	153	276	1188	964
............................................................................................................................ACCCTGTAGATCCGAATTTG.....................................................................................................................	20	1	1082.00	1082	10	11	68	22	443	324	204
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGG............................................................................	20	3	397.67	1193	10	10	590	32	49	392	110
..............................................................................................................................CCTGTAGATCCGAATTTGTT...................................................................................................................	20	1	227.00	227	3	0	9	2	3	80	130
...........................................................................................................................TACCCTGTAGATCCGAATTTGT....................................................................................................................	22	1	198.00	198	0	1	3	0	10	7	177
............................................................................................................................ACCCTGTAGATCCGAATTT......................................................................................................................	19	1	186.00	186	2	1	2	2	30	23	126
.............................................................................................................................CCCTGTAGATCCGAATTTGTTT..................................................................................................................	22	1	178.00	178	7	0	4	0	9	51	107
.............................................................................................................................CCCTGTAGATCCGAATTTGT....................................................................................................................	20	1	173.00	173	0	0	0	2	8	154	9
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT..........................................................................	21	3	166.00	498	1	0	16	2	8	459	12
............................................................................................................................ACCCTGTAGATCCGAATT.......................................................................................................................	18	1	138.00	138	0	0	0	1	53	37	47
...........................................................................................................................TACCCTGTAGATCCGAATTTGTT...................................................................................................................	23	1	134.00	134	6	0	1	1	2	25	99
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT.........................................................................	21	3	113.00	339	0	0	28	3	0	252	56
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAG.............................................................................	19	3	91.67	275	3	7	167	14	2	69	13
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG........................................................................	24	1	77.00	77	2	0	11	1	2	53	8
...............................................................................................................................CTGTAGATCCGAATTTGTT...................................................................................................................	19	1	52.00	52	7	1	4	0	0	5	35
....................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT.........................................................................	24	3	50.33	151	3	0	3	0	1	44	100
............................................................................................................................ACCCTGTAGATCCGAATTTGTTTT.................................................................................................................	24	1	40.00	40	1	1	0	0	0	2	36
.........................................................................................................................................................................TTCGGTTCTAGAGAGGTTT.........................................................................	19	3	31.67	95	0	0	3	0	0	53	39
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGT...........................................................................	20	3	30.67	92	0	0	9	0	2	81	0
.............................................................................................................................CCCTGTAGATCCGAATTTG.....................................................................................................................	19	1	30.00	30	0	0	0	0	1	29	0

droEug1

TGCTCAC---------CTGAGC-----------TCATTCAGCCGCCTGCG-----A---CTGTTAGGTCTCC-T--------------------------------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACTCTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTTCATCGATAGCCGAAT---ACGGAAGTGAAATCAAAAATAAGTG---AAAAAGTGAATT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

TGCGCGCC--------CTGAGC-----------TCCCTTCGCC-CCTGCG-----A---CTGC----TCGCC-T--------------------------------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTGTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTCCATCGTAAAACGCAT---TTT-GAGTGAAAAAGAAATGGAGTG---ATAAAGTGAACC	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TGCCCACC--------CTGAGT-----------TCACTTCGCC-CCTGCG-----A---CTGC----TCTCC-T--------------------------------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGATAAAA-CAT---TTA-AAGTGAAACTGAAATGAAGTG---AAAAAGTGAAAC	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TGCTCAC---------CTCAGT-----------TCATTTCGCC-GCTGCG-----A---CTGC----TCCCC-T--------------------------------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCAGCGAAATAG-CATGATTTC-AAATGAAGCCGAAATCAAGTG---ACAAAGTGAATT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TGCTCAC---------CTCCGT-----------TCATTTCACC-CATGCGACGCGA---CTGT----TCTCC-T--------------------------------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTCCAATATCCATCGATAAAT-CAA---------AAGAAGCCGGAATCAAGTG---AAAAAGTGAATT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TGCTCAC---------CTGAGT----CACTGCGTCATTTCAAC-CCGGCG-----A---CTGC----TCCCC-TC---------------CAGTT-----------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTCCATCGAAAAAG-TG--ATCT-------CAGCTGATATTAAACTTTACCAAAGTGA---	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TGCTCACCTGCCTCACCTGACT-----------TCATTATCCC-GCAGCG-----G---CTGT----TCAGC-G--------------------------------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCAACGTAAAAT-CAT---------------------------------------AATT	Size	Hit Count	Total Norm	Total
No Reads

droAna3

TGCCCACC-GCCTCACCCAACACCGTCAC------------AC-CTTGCG-----G---CTGT--GCTCCTA-T--------------------------------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATTTCCATCGTAAAAT-AAAAGT--------GTT--TA-------------ATGAAGTGATTG	Size	Hit Count	Total Norm	Total	V105 Male-body	V106 Head	V055 Head	V039 Embryo	M044 Female-body	M058 Embryo
............................................................................................................................ACCCTGTAGATCCGAATTTGTT...................................................................................................................	22	1	107386.00	107386	19236	26555	2718	2519	30654	25704
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT.........................................................................	23	1	72010.00	72010	16536	3490	2054	479	37540	11911
............................................................................................................................ACCCTGTAGATCCGAATTTGT....................................................................................................................	21	1	10625.00	10625	1991	2640	436	93	4054	1411
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT..........................................................................	22	1	10012.00	10012	3524	1231	523	39	3827	868
............................................................................................................................ACCCTGTAGATCCGAATTTGTTT..................................................................................................................	23	1	3914.00	3914	783	1278	101	34	1462	256
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT.........................................................................	22	1	3125.00	3125	104	21	14	3	2940	43
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT...........................................................................	21	1	3098.00	3098	1757	214	228	7	802	90
.............................................................................................................................CCCTGTAGATCCGAATTTGTT...................................................................................................................	21	1	2785.00	2785	7	6	0	0	2761	11
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGG............................................................................	20	1	1659.00	1659	963	107	80	2	485	22
............................................................................................................................ACCCTGTAGATCCGAATTTG.....................................................................................................................	20	1	1543.00	1543	225	102	53	4	1139	20
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAG.............................................................................	19	1	368.00	368	195	32	23	5	103	10
.............................................................................................................................CCCTGTAGATCCGAATTTGT....................................................................................................................	20	1	367.00	367	1	1	0	0	364	1
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT..........................................................................	21	1	344.00	344	18	5	1	1	317	2
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT.........................................................................	21	1	203.00	203	4	0	1	0	172	26
..............................................................................................................................CCTGTAGATCCGAATTTGTT...................................................................................................................	20	1	191.00	191	9	6	0	1	167	8
.............................................................................................................................CCCTGTAGATCCGAATTTGTTT..................................................................................................................	22	1	159.00	159	5	12	0	0	140	2
............................................................................................................................ACCCTGTAGATCCGAATTT......................................................................................................................	19	1	115.00	115	2	34	3	9	56	11
.............................................................................................................................CCCTGTAGATCCGAATTTG.....................................................................................................................	19	1	105.00	105	0	1	0	0	104	0
............................................................................................................................ACCCTGTAGATCCGAATTTGTTTT.................................................................................................................	24	1	72.00	72	13	32	4	0	21	2
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG........................................................................	24	1	62.00	62	8	2	2	0	49	1
.....................................................................................................................................................................CAAATTCGGTTCTAGAGA..............................................................................	18	1	53.00	53	4	7	3	8	20	11
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGT...........................................................................	20	1	52.00	52	5	0	1	0	46	0
...........................................................................................................................TACCCTGTAGATCCGAATTTGTT...................................................................................................................	23	1	42.00	42	4	4	1	0	32	1
...........................................................................................................................TACCCTGTAGATCCGAATTTGT....................................................................................................................	22	1	42.00	42	5	5	0	3	13	16
......................................................................................................................................................................AAATTCGGTTCTAGAGAGG............................................................................	19	1	39.00	39	4	0	0	0	35	0
........................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT.........................................................................	20	1	39.00	39	1	0	0	0	30	8
..........................................................................................................................................................................TCGGTTCTAGAGAGGTTT.........................................................................	18	1	39.00	39	0	0	0	0	36	3
....................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT.........................................................................	24	1	38.00	38	5	0	0	0	24	9
............................................................................................................................ACCCTGTAGATCCGAATT.......................................................................................................................	18	1	38.00	38	0	2	0	0	26	10
...............................................................................................................................CTGTAGATCCGAATTTGTT...................................................................................................................	19	1	33.00	33	4	1	0	1	24	3
..............................................................................................................................CCTGTAGATCCGAATTTGT....................................................................................................................	19	1	25.00	25	0	1	0	0	23	1
.........................................................................................................................................................................TTCGGTTCTAGAGAGGTTT.........................................................................	19	1	24.00	24	1	0	0	0	20	3
................................................................................................................................TGTAGATCCGAATTTGTT...................................................................................................................	18	1	23.00	23	9	7	1	0	6	0
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGTT..........................................................................	20	1	19.00	19	1	0	1	0	15	2

droBip1

TGCCTGCC----TTGCCCGACACCGTCAC------------AC-CTTGCA-----A---CTGT----TCCTA-T--------------------------------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGTAAAAG-----------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

dp5

TGCTCACCT------CTCGGCGCCCTCGG------------GC-ATGG-----CAC---CGG---GC-TCCACACCCCGTCCTCTGCAGGCAGTTTTTTTGGTTCTCAAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTACAACGAAAACA-GATAGT--------TATTAAAGTGAAAAGTG---ATAAAGTG----	Size	Hit Count	Total Norm	Total	V112 Male-body	V043 Embryo	V051 Head	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head
............................................................................................................................ACCCTGTAGATCCGAATTTGTT...................................................................................................................	22	1	198209.00	198209	18385	18078	3324	2076	66242	85181	4923
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT.........................................................................	23	1	148874.00	148874	16970	3262	3150	701	76579	43845	4367
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT..........................................................................	22	1	25785.00	25785	4676	348	804	631	14371	3865	1090
............................................................................................................................ACCCTGTAGATCCGAATTTGT....................................................................................................................	21	1	13953.00	13953	1605	463	523	821	6831	3172	538
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT.........................................................................	22	1	6519.00	6519	142	17	12	2	6212	121	13
.............................................................................................................................CCCTGTAGATCCGAATTTGTT...................................................................................................................	21	1	6274.00	6274	42	8	1	15	6167	36	5
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT...........................................................................	21	1	5206.00	5206	1449	84	233	61	2996	269	114
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGG............................................................................	20	1	3595.00	3595	795	26	78	13	2600	58	25
............................................................................................................................ACCCTGTAGATCCGAATTTGTTT..................................................................................................................	23	1	2920.00	2920	351	154	38	25	1525	730	97
............................................................................................................................ACCCTGTAGATCCGAATTTG.....................................................................................................................	20	1	2269.00	2269	127	15	76	75	1933	36	7
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT..........................................................................	21	1	1179.00	1179	38	3	6	0	1121	7	4
.............................................................................................................................CCCTGTAGATCCGAATTTGT....................................................................................................................	20	1	615.00	615	1	0	1	2	611	0	0
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAG.............................................................................	19	1	576.00	576	111	14	13	1	427	7	3
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT.........................................................................	21	1	384.00	384	0	0	0	0	368	14	2
..............................................................................................................................CCTGTAGATCCGAATTTGTT...................................................................................................................	20	1	341.00	341	7	5	1	2	314	11	1
...........................................................................................................................TACCCTGTAGATCCGAATTTGT....................................................................................................................	22	1	283.00	283	10	24	9	16	103	109	12
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGT...........................................................................	20	1	253.00	253	9	0	1	0	243	0	0
......................................................................................................................................................................AAATTCGGTTCTAGAGAGG............................................................................	19	1	217.00	217	8	0	1	0	208	0	0
.............................................................................................................................CCCTGTAGATCCGAATTTG.....................................................................................................................	19	1	186.00	186	0	0	0	0	186	0	0
.............................................................................................................................CCCTGTAGATCCGAATTTGTTT..................................................................................................................	22	1	179.00	179	3	8	0	0	155	10	3
...........................................................................................................................TACCCTGTAGATCCGAATTTGTT...................................................................................................................	23	1	158.00	158	11	10	3	5	88	37	4
............................................................................................................................ACCCTGTAGATCCGAATTT......................................................................................................................	19	1	110.00	110	1	6	0	10	82	8	3
..........................................................................................................................................................................TCGGTTCTAGAGAGGTTT.........................................................................	18	1	106.00	106	0	0	0	0	99	5	2
........................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT.........................................................................	20	1	96.00	96	3	1	1	1	79	10	1
.........................................................................................................................................................................TTCGGTTCTAGAGAGGTTT.........................................................................	19	1	96.00	96	0	0	0	0	88	4	4
............................................................................................................................ACCCTGTAGATCCGAATT.......................................................................................................................	18	1	94.00	94	0	4	0	26	58	6	0
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG........................................................................	24	1	88.00	88	9	2	2	0	72	3	0
....................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT.........................................................................	24	1	84.00	84	7	0	0	0	63	13	1
.....................................................................................................................................................................CAAATTCGGTTCTAGAGA..............................................................................	18	1	70.00	70	2	7	5	0	52	3	1
...........................................................................................................................TACCCTGTAGATCCGAATTTG.....................................................................................................................	21	1	63.00	63	5	3	1	3	49	2	0
...............................................................................................................................CTGTAGATCCGAATTTGTT...................................................................................................................	19	1	55.00	55	2	2	0	0	49	2	0
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGTT..........................................................................	20	1	55.00	55	1	0	0	0	54	0	0
............................................................................................................................ACCCTGTAGATCCGAATTTGTTTT.................................................................................................................	24	1	40.00	40	5	0	1	0	27	5	2
................................................................................................................................TGTAGATCCGAATTTGTT...................................................................................................................	18	1	29.00	29	2	2	0	1	23	1	0
.........................................................................................................................................................................TTCGGTTCTAGAGAGGTT..........................................................................	18	1	23.00	23	0	1	0	0	21	1	0
..............................................................................................................................CCTGTAGATCCGAATTTGT....................................................................................................................	19	1	23.00	23	1	0	0	0	22	0	0
........................................................................................................................................................................ATTCGGTTCTAGAGAGGTT..........................................................................	19	1	22.00	22	0	0	0	0	21	1	0
......................................................................................................................................................................AAATTCGGTTCTAGAGAG.............................................................................	18	1	22.00	22	0	1	0	0	21	0	0
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTG........................................................................	23	1	16.00	16	0	0	0	0	13	3	0
....................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTT..........................................................................	23	1	13.00	13	1	1	0	0	7	4	0

droPer2

TGCTCACCT------CTCGGCGCCCTCGG------------GC-TTGG-----CAC---CGG---GC-TCCACACCCCGTTCTCTGCAGGCAGTTTTTTTGGTTCTCAAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTACAACGAAAACA-GATAGT--------TATTAAAGTGAAAAGTG---ATAAAGTG----	Size	Hit Count	Total Norm	Total	V111 Male-body	V042 Embryo	V050 Head	V057 Head	M021 Embryo	M042 Female-body
............................................................................................................................ACCCTGTAGATCCGAATTTGTT...................................................................................................................	22	1	54754.00	54754	25603	2966	1022	3912	13316	7935
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT.........................................................................	23	1	29652.00	29652	7641	768	1580	3744	5917	10002
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT..........................................................................	22	1	6958.00	6958	1978	113	437	939	1742	1749
............................................................................................................................ACCCTGTAGATCCGAATTTGT....................................................................................................................	21	1	5574.00	5574	1839	104	177	761	1997	696
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT...........................................................................	21	1	1868.00	1868	738	21	90	265	350	404
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGG............................................................................	20	1	1019.00	1019	541	6	22	83	19	348
.............................................................................................................................CCCTGTAGATCCGAATTTGTT...................................................................................................................	21	1	879.00	879	22	1	1	2	124	729
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT.........................................................................	22	1	864.00	864	29	8	9	23	5	790
............................................................................................................................ACCCTGTAGATCCGAATTTGTTT..................................................................................................................	23	1	711.00	711	389	30	11	57	101	123
............................................................................................................................ACCCTGTAGATCCGAATTTG.....................................................................................................................	20	1	522.00	522	100	8	22	71	196	125
...........................................................................................................................TACCCTGTAGATCCGAATTTGT....................................................................................................................	22	1	288.00	288	15	7	3	10	243	10
............................................................................................................................ACCCTGTAGATCCGAATTT......................................................................................................................	19	1	190.00	190	4	3	0	1	170	12
............................................................................................................................ACCCTGTAGATCCGAATT.......................................................................................................................	18	1	163.00	163	0	1	0	1	151	10
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAG.............................................................................	19	1	158.00	158	59	9	8	14	10	58
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT..........................................................................	21	1	148.00	148	10	0	2	4	3	129
.............................................................................................................................CCCTGTAGATCCGAATTTGT....................................................................................................................	20	1	90.00	90	2	0	0	0	20	68
..............................................................................................................................CCTGTAGATCCGAATTTGTT...................................................................................................................	20	1	76.00	76	13	1	2	2	10	48
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT.........................................................................	21	1	45.00	45	0	0	1	0	0	44
...........................................................................................................................TACCCTGTAGATCCGAATTTGTT...................................................................................................................	23	1	42.00	42	6	1	2	5	17	11
.............................................................................................................................CCCTGTAGATCCGAATTTGTTT..................................................................................................................	22	1	40.00	40	4	0	1	1	22	12
...........................................................................................................................TACCCTGTAGATCCGAATTTG.....................................................................................................................	21	1	39.00	39	1	0	1	1	31	5
.....................................................................................................................................................................CAAATTCGGTTCTAGAGA..............................................................................	18	1	36.00	36	3	8	1	4	7	13
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGT...........................................................................	20	1	36.00	36	2	0	0	1	0	33
................................................................................................................................TGTAGATCCGAATTTGTT...................................................................................................................	18	1	31.00	31	10	0	0	0	15	6
......................................................................................................................................................................AAATTCGGTTCTAGAGAGG............................................................................	19	1	29.00	29	0	0	0	0	0	29
...............................................................................................................................CTGTAGATCCGAATTTGTT...................................................................................................................	19	1	25.00	25	10	2	1	1	5	6
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG........................................................................	24	1	20.00	20	1	0	0	2	4	13
........................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT.........................................................................	20	1	16.00	16	3	1	1	0	2	9
.............................................................................................................................CCCTGTAGATCCGAATTTG.....................................................................................................................	19	1	15.00	15	0	0	0	0	1	14
..............................................................................................................................CCTGTAGATCCGAATTTGT....................................................................................................................	19	1	14.00	14	0	0	1	1	8	4
.........................................................................................................................................................................TTCGGTTCTAGAGAGGTTT.........................................................................	19	1	11.00	11	1	0	0	0	0	10
....................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT.........................................................................	24	1	9.00	9	2	0	1	1	4	1
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGTT..........................................................................	20	1	8.00	8	0	0	0	0	0	8
.............................................................................................................................CCCTGTAGATCCGAATTT......................................................................................................................	18	1	7.00	7	0	0	0	0	6	1
.......................................................................................................................................................................AATTCGGTTCTAGAGAGG............................................................................	18	1	7.00	7	1	0	0	0	0	6
..........................................................................................................................................................................TCGGTTCTAGAGAGGTTT.........................................................................	18	1	6.00	6	0	0	0	0	0	6
............................................................................................................................ACCCTGTAGATCCGAATTTGTTTT.................................................................................................................	24	1	4.00	4	3	0	0	0	1	0

droWil2

T----------------------------------------------------------------------------------------------------------CGCTTTGTTCTACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTTTTTAAGGACAAATTCGGTTCTAGAGAGGTTTAAGTGGTTCAATGTTCTACAAACAAACCAA---AAA-AAGTAACAACAATAACAAGTG---ACAA--------	Size	Hit Count	Total Norm	Total	V117 Male-body	V118 Embryo	V119 Head	M020 Head	M045 Female-body
............................................................................................................................ACCCTGTAGATCCGAATTTGTT...................................................................................................................	22	1	263241.00	263241	11613	199894	19032	14990	17712
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT.........................................................................	23	1	81969.00	81969	6283	34289	3130	7722	30545
............................................................................................................................ACCCTGTAGATCCGAATTTGT....................................................................................................................	21	1	17650.00	17650	1166	5397	1482	7555	2050
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT..........................................................................	22	1	17478.00	17478	1722	3382	889	6857	4628
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT...........................................................................	21	1	4828.00	4828	949	868	312	830	1869
............................................................................................................................ACCCTGTAGATCCGAATTTGTTT..................................................................................................................	23	1	3374.00	3374	291	1854	452	183	594
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT.........................................................................	22	1	2623.00	2623	45	208	14	3	2353
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGG............................................................................	20	1	2139.00	2139	529	239	222	146	1003
............................................................................................................................ACCCTGTAGATCCGAATTTG.....................................................................................................................	20	1	1943.00	1943	92	113	53	1298	387
.............................................................................................................................CCCTGTAGATCCGAATTTGTT...................................................................................................................	21	1	1671.00	1671	2	26	9	33	1601
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAG.............................................................................	19	1	499.00	499	110	60	31	14	284
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT..........................................................................	21	1	356.00	356	14	24	8	8	302
............................................................................................................................ACCCTGTAGATCCGAATTT......................................................................................................................	19	1	207.00	207	1	81	10	86	29
.............................................................................................................................CCCTGTAGATCCGAATTTGT....................................................................................................................	20	1	204.00	204	1	0	3	8	192
............................................................................................................................ACCCTGTAGATCCGAATT.......................................................................................................................	18	1	199.00	199	0	20	2	164	13
..................................................................................................................................................TTATACTAGTTTTTAAGGA................................................................................................	19	1	186.00	186	0	182	3	0	1
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGT...........................................................................	20	1	169.00	169	6	8	2	1	152
..............................................................................................................................CCTGTAGATCCGAATTTGTT...................................................................................................................	20	1	166.00	166	7	33	10	21	95
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT.........................................................................	21	1	157.00	157	11	6	0	1	139
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA........................................................................	24	1	149.00	149	12	44	7	1	85
.....................................................................................................................................................................CAAATTCGGTTCTAGAGA..............................................................................	18	1	111.00	111	4	37	9	4	57
......................................................................................................................................................................AAATTCGGTTCTAGAGAGG............................................................................	19	1	80.00	80	2	3	1	0	74
.............................................................................................................................CCCTGTAGATCCGAATTTGTTT..................................................................................................................	22	1	73.00	73	1	6	1	9	56
.........................................................................................................................................................................TTCGGTTCTAGAGAGGTTT.........................................................................	19	1	63.00	63	1	0	1	2	59
..........................................................................................................................................................................TCGGTTCTAGAGAGGTTT.........................................................................	18	1	59.00	59	0	0	0	0	59
................................................................................................................................TGTAGATCCGAATTTGTT...................................................................................................................	18	1	56.00	56	3	21	1	18	13
........................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT.........................................................................	20	1	55.00	55	0	5	4	1	45
.............................................................................................................................CCCTGTAGATCCGAATTTG.....................................................................................................................	19	1	40.00	40	1	0	0	0	39
...............................................................................................................................CTGTAGATCCGAATTTGTT...................................................................................................................	19	1	31.00	31	3	12	4	6	6
......................................................................................................................................................................AAATTCGGTTCTAGAGAG.............................................................................	18	1	29.00	29	1	0	1	0	27
..............................................................................................................................CCTGTAGATCCGAATTTGTTTT.................................................................................................................	22	1	28.00	28	0	26	0	2	0
............................................................................................................................ACCCTGTAGATCCGAATTTGTTTT.................................................................................................................	24	1	27.00	27	2	14	3	1	7
..............................................................................................................................CCTGTAGATCCGAATTTGTTT..................................................................................................................	21	1	25.00	25	1	11	6	3	4
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGTT..........................................................................	20	1	22.00	22	0	0	1	0	21
....................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT.........................................................................	24	1	22.00	22	2	7	0	0	13
..............................................................................................................................CCTGTAGATCCGAATTTGT....................................................................................................................	19	1	21.00	21	1	1	0	10	9
............................................................................................................................ACCCTGTAGATCCGAATTTGTTTTATACT............................................................................................................	29	1	21.00	21	0	0	0	21	0
...................................................................................................................................................................GACAAATTCGGTTCTAGAGAGGT...........................................................................	23	1	20.00	20	1	17	2	0	0
...........................................................................................................................TACCCTGTAGATCCGAATTTGTT...................................................................................................................	23	1	19.00	19	0	1	0	4	14
.........................................................................................................................................................................TTCGGTTCTAGAGAGGTT..........................................................................	18	1	16.00	16	0	0	0	1	15
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA.......................................................................	25	1	13.00	13	2	4	2	1	4
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGT...........................................................................	19	1	12.00	12	3	0	0	0	9
....................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGT...........................................................................	22	1	11.00	11	3	6	0	0	2
.......................................................................................................................................................................AATTCGGTTCTAGAGAGG............................................................................	18	1	9.00	9	0	1	0	0	8
........................................................................................................................................................................ATTCGGTTCTAGAGAGGTT..........................................................................	19	1	9.00	9	0	1	0	0	8

droVir3

T----------------------------------------------------------------------------------------------------------CACTTTGTTCCACGTCCACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTCTGTGGCTCATTGTCCAGCGAATATG-TG--------------------------------------------	Size	Hit Count	Total Norm	Total	V116 Male-body	V053 Head	V047 Embryo	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis
............................................................................................................................ACCCTGTAGATCCGAATTTGTT...................................................................................................................	22	1	114714.00	114714	20604	563	8469	8254	1181	7736	40960	49	532	209	215	306	2454	160	1	8	57	2180	1254	603	1349	1463	936	36	2209	2955	514	46	54	337	145	432	1320	273	534	20	725	82	87	153	65	49	5135
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT.........................................................................	23	1	100913.00	100913	20758	1418	2206	2610	1710	18365	22232	23	355	61	9	18	160	1	0	0	3	4031	2003	916	2791	1941	2009	29	2242	5779	345	64	52	386	196	441	1673	271	632	29	716	49	112	174	75	37	3991
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT..........................................................................	22	1	18775.00	18775	5540	383	184	1809	1398	3909	2374	4	44	8	1	2	28	1	0	1	1	430	262	100	241	236	150	5	189	429	75	11	7	57	19	50	173	26	72	2	62	1	1	3	5	4	478
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT...........................................................................	21	1	15475.00	15475	5873	368	137	400	189	4653	813	10	60	24	7	4	65	0	0	0	1	294	129	108	169	147	110	3	122	214	172	12	11	64	34	63	161	48	94	1	105	1	0	1	4	3	801
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGG............................................................................	20	1	14733.00	14733	5963	317	117	140	62	7074	238	6	35	15	9	6	48	0	0	1	0	0	2	2	1	2	2	8	0	33	61	5	3	22	11	31	49	17	38	0	39	1	0	4	1	5	365
............................................................................................................................ACCCTGTAGATCCGAATTTGT....................................................................................................................	21	1	13896.00	13896	2182	163	209	3460	957	897	1641	2	44	23	15	22	175	7	1	0	1	461	253	140	328	505	250	4	611	587	48	2	10	36	9	55	130	32	56	1	91	1	2	6	2	11	466
............................................................................................................................ACCCTGTAGATCCGAATTTG.....................................................................................................................	20	1	2082.00	2082	197	38	1	801	353	339	16	0	6	1	0	0	5	0	0	0	0	30	26	18	28	39	31	1	53	37	4	0	0	3	0	3	9	4	4	0	10	0	0	0	0	0	25
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT.........................................................................	22	1	2000.00	2000	150	5	21	2	5	1550	81	0	3	0	0	1	0	0	0	0	0	14	12	4	17	6	8	0	12	45	5	0	0	5	2	4	15	2	4	2	4	0	0	1	0	0	20
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAG.............................................................................	19	1	789.00	789	286	22	5	8	5	299	10	0	3	2	0	0	1	0	0	0	0	18	14	4	5	6	5	0	5	20	2	0	1	1	0	7	10	3	2	0	11	0	0	0	1	1	32
.............................................................................................................................CCCTGTAGATCCGAATTTGTT...................................................................................................................	21	1	764.00	764	4	0	2	21	1	719	9	0	0	0	0	0	1	0	0	0	0	0	1	0	1	0	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2
......................................................................................................................................................................AAATTCGGTTCTAGAGAGG............................................................................	19	1	651.00	651	35	2	2	0	0	608	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGT...........................................................................	20	1	472.00	472	36	4	0	0	0	420	2	0	1	0	0	0	0	0	0	0	0	1	0	0	1	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	4
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT..........................................................................	21	1	392.00	392	44	0	0	0	0	323	12	0	0	0	0	0	0	0	0	0	0	1	0	0	3	2	3	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1
...........................................................................................................................CACCCTGTAGATCCGAATTTGTT...................................................................................................................	23	1	194.00	194	22	1	15	10	4	24	96	0	0	0	0	0	0	1	0	0	0	3	2	0	1	1	0	0	1	4	2	0	0	0	0	0	3	0	3	0	0	0	0	0	0	0	1
............................................................................................................................ACCCTGTAGATCCGAATT.......................................................................................................................	18	1	139.00	139	0	0	3	78	20	20	3	0	2	1	0	0	0	0	0	0	0	1	1	1	2	1	1	0	1	2	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT.........................................................................	21	1	135.00	135	2	0	1	0	0	109	17	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1
.....................................................................................................................................................................CAAATTCGGTTCTAGAGA..............................................................................	18	1	128.00	128	4	2	9	1	3	55	3	0	1	1	0	0	0	0	0	0	0	3	5	2	5	2	1	0	1	5	2	1	0	0	1	0	7	1	2	0	3	0	0	0	0	0	8
............................................................................................................................ACCCTGTAGATCCGAATTT......................................................................................................................	19	1	123.00	123	2	2	0	48	27	13	3	0	0	0	0	0	0	0	0	0	0	4	3	3	0	5	2	0	4	3	1	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC........................................................................	24	1	113.00	113	8	0	7	10	7	9	48	0	6	0	0	0	0	0	0	0	0	1	0	0	0	1	1	1	1	1	1	0	0	1	0	1	2	0	2	0	1	0	0	0	0	0	4
...........................................................................................................................CACCCTGTAGATCCGAATTTGT....................................................................................................................	22	1	90.00	90	5	1	2	19	8	8	28	0	0	1	0	0	1	0	0	0	0	0	2	2	0	2	1	0	1	4	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	3
.............................................................................................................................CCCTGTAGATCCGAATTTGT....................................................................................................................	20	1	87.00	87	0	0	0	5	2	77	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................CCTGTAGATCCGAATTTGTT...................................................................................................................	20	1	69.00	69	5	0	2	8	2	32	9	0	0	0	0	0	1	0	0	0	0	1	0	2	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5
........................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT.........................................................................	20	1	57.00	57	1	0	0	0	0	34	5	0	0	0	0	1	0	0	0	0	0	1	1	0	0	2	0	0	2	6	1	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	0
.........................................................................................................................................................................TTCGGTTCTAGAGAGGTTT.........................................................................	19	1	52.00	52	0	0	0	1	2	40	4	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2
...............................................................................................................................CTGTAGATCCGAATTTGTT...................................................................................................................	19	1	48.00	48	2	0	4	4	2	8	2	1	0	1	0	0	1	0	0	0	0	1	0	0	1	2	1	0	1	1	1	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	13
............................................................................................................................ACCCTGTAGATCCGAATTTGTTG..................................................................................................................	23	1	45.00	45	2	0	1	15	3	9	7	0	0	2	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1
.......................................................................................................................................................................AATTCGGTTCTAGAGAGG............................................................................	18	1	45.00	45	0	0	0	0	0	44	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................TGTAGATCCGAATTTGTT...................................................................................................................	18	1	41.00	41	2	0	0	12	1	2	0	0	0	0	3	1	7	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	8
..........................................................................................................................................................................TCGGTTCTAGAGAGGTTT.........................................................................	18	1	35.00	35	0	0	0	0	0	33	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................CCCTGTAGATCCGAATTTG.....................................................................................................................	19	1	29.00	29	0	0	0	0	0	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGTT..........................................................................	20	1	26.00	26	0	0	0	0	0	25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................AAATTCGGTTCTAGAGAG.............................................................................	18	1	23.00	23	1	0	0	0	0	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................CACCCTGTAGATCCGAATTTG.....................................................................................................................	21	1	19.00	19	2	0	0	9	1	4	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGT...........................................................................	19	1	18.00	18	0	0	0	0	0	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT.........................................................................	24	1	15.00	15	1	0	0	0	0	11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................ATTCGGTTCTAGAGAGGT...........................................................................	18	1	13.00	13	0	0	0	0	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

CA-----------------------------------------------------------------------------------------------------------CTCTGTTCCACGTCTACCCTGTAGATCCGAATTTGTTGTACCATAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTATGTGGCTCATTGTCCAGCGAA---------------------------------------------------	Size	Hit Count	Total Norm	Total	V110 Male-body	V056 Head	V049 Head	V041 Embryo	M046 Female-body	M060 Embryo
............................................................................................................................ACCCTGTAGATCCGAATTTGTT...................................................................................................................	22	1	438052.00	438052	23109	1280	705	14157	28798	370003
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT.........................................................................	23	1	323963.00	323963	17222	1932	975	2759	70958	230117
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT..........................................................................	22	1	25263.00	25263	2882	433	220	213	6731	14784
............................................................................................................................ACCCTGTAGATCCGAATTTGT....................................................................................................................	21	1	18452.00	18452	1715	407	227	342	2799	12962
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT...........................................................................	21	1	9328.00	9328	3365	377	193	41	3982	1370
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT.........................................................................	22	1	6883.00	6883	118	10	5	22	5710	1018
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGG............................................................................	20	1	5866.00	5866	2589	358	131	31	2579	178
.............................................................................................................................CCCTGTAGATCCGAATTTGTT...................................................................................................................	21	1	2843.00	2843	2	1	0	9	2637	194
...........................................................................................................................TACCCTGTAGATCCGAATTTGT....................................................................................................................	22	1	1906.00	1906	45	10	7	50	87	1707
............................................................................................................................ACCCTGTAGATCCGAATTTG.....................................................................................................................	20	1	692.00	692	131	36	20	10	371	124
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT..........................................................................	21	1	625.00	625	31	3	3	0	534	54
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT.........................................................................	21	1	471.00	471	7	0	0	0	305	159
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA........................................................................	24	1	420.00	420	43	6	3	6	120	242
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGT...........................................................................	20	1	327.00	327	9	4	1	0	309	4
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAG.............................................................................	19	1	325.00	325	123	18	11	2	164	7
......................................................................................................................................................................AAATTCGGTTCTAGAGAGG............................................................................	19	1	237.00	237	21	1	1	0	213	1
.............................................................................................................................CCCTGTAGATCCGAATTTGT....................................................................................................................	20	1	220.00	220	0	0	0	0	214	6
..............................................................................................................................CCTGTAGATCCGAATTTGTT...................................................................................................................	20	1	199.00	199	7	0	0	2	107	83
...........................................................................................................................TACCCTGTAGATCCGAATTTGTT...................................................................................................................	23	1	186.00	186	5	1	0	7	38	135
.........................................................................................................................................................................TTCGGTTCTAGAGAGGTTT.........................................................................	19	1	126.00	126	1	0	0	1	58	66
....................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT.........................................................................	24	1	123.00	123	3	0	0	2	68	50
........................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT.........................................................................	20	1	117.00	117	1	1	0	2	54	59
............................................................................................................................ACCCTGTAGATCCGAATTT......................................................................................................................	19	1	106.00	106	0	2	5	0	36	63
..........................................................................................................................................................................TCGGTTCTAGAGAGGTTT.........................................................................	18	1	103.00	103	0	0	0	0	40	63
.....................................................................................................................................................................CAAATTCGGTTCTAGAGA..............................................................................	18	1	74.00	74	2	5	6	3	46	12
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTA........................................................................	23	1	63.00	63	3	1	0	0	30	29
............................................................................................................................ACCCTGTAGATCCGAATTTGTTG..................................................................................................................	23	1	62.00	62	3	0	0	1	15	43
............................................................................................................................ACCCTGTAGATCCGAATT.......................................................................................................................	18	1	57.00	57	0	0	0	0	18	39
...............................................................................................................................CTGTAGATCCGAATTTGTT...................................................................................................................	19	1	45.00	45	7	0	3	6	16	13
...........................................................................................................................TACCCTGTAGATCCGAATTTG.....................................................................................................................	21	1	40.00	40	1	2	1	2	13	21
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGTT..........................................................................	20	1	36.00	36	1	0	0	0	23	12

droGri2

-------------------------------------------------------A---CTGT----T-----T--------------------------------TCACTTTGTTCCACGTCTACCCTGTAGATCCGAATTTGTTGTACACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGCTCAATGCCCACCGAAA--------------------------------------------------	Size	Hit Count	Total Norm	Total	V109 Male-body	M041 Female-body
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT.........................................................................	23	1	10470.00	10470	3920	6550
............................................................................................................................ACCCTGTAGATCCGAATTTGTT...................................................................................................................	22	1	4022.00	4022	1918	2104
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT..........................................................................	22	1	893.00	893	400	493
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT.........................................................................	22	1	585.00	585	24	561
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT...........................................................................	21	1	298.00	298	172	126
............................................................................................................................ACCCTGTAGATCCGAATTTGT....................................................................................................................	21	1	260.00	260	91	169
.............................................................................................................................CCCTGTAGATCCGAATTTGTT...................................................................................................................	21	1	191.00	191	0	191
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGG............................................................................	20	1	89.00	89	49	40
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT..........................................................................	21	1	56.00	56	3	53
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT.........................................................................	21	1	29.00	29	0	29
............................................................................................................................ACCCTGTAGATCCGAATTTG.....................................................................................................................	20	1	29.00	29	10	19
.....................................................................................................................................................................CAAATTCGGTTCTAGAGA..............................................................................	18	1	20.00	20	0	20
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG........................................................................	24	1	18.00	18	3	15
.............................................................................................................................CCCTGTAGATCCGAATTTGT....................................................................................................................	20	1	17.00	17	0	17
.....................................................................................................................................................................CAAATTCGGTTCTAGAGAG.............................................................................	19	1	14.00	14	3	11
........................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT.........................................................................	20	1	12.00	12	0	12
..............................................................................................................................CCTGTAGATCCGAATTTGTT...................................................................................................................	20	1	12.00	12	0	12
.........................................................................................................................................................................TTCGGTTCTAGAGAGGTTT.........................................................................	19	1	11.00	11	1	10
............................................................................................................................ACCCTGTAGATCCGAATTTGTTG..................................................................................................................	23	1	9.00	9	0	9
....................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT.........................................................................	24	1	9.00	9	0	9
..........................................................................................................................................................................TCGGTTCTAGAGAGGTTT.........................................................................	18	1	8.00	8	0	8
......................................................................................................................................................................AAATTCGGTTCTAGAGAGG............................................................................	19	1	7.00	7	0	7
......................................................................................................................................................................AAATTCGGTTCTAGAGAGGT...........................................................................	20	1	6.00	6	0	6
............................................................................................................................ACCCTGTAGATCCGAATTT......................................................................................................................	19	1	3.00	3	0	3
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGTT..........................................................................	20	1	3.00	3	0	3
............................................................................................................................ACCCTGTAGATCCGAATT.......................................................................................................................	18	1	2.00	2	0	2
......................................................................................................................................................................AAATTCGGTTCTAGAGAG.............................................................................	18	1	2.00	2	0	2
.......................................................................................................................................................................AATTCGGTTCTAGAGAGG............................................................................	18	1	2.00	2	0	2
...........................................................................................................................TACCCTGTAGATCCGAATTTGTT...................................................................................................................	23	1	2.00	2	0	2
..............................................................................................................................CCTGTAGATCCGAATTTGT....................................................................................................................	19	1	2.00	2	0	2
.............................................................................................................................CCCTGTAGATCCGAATTT......................................................................................................................	18	1	1.00	1	0	1
...........................................................................................................................TACCCTGTAGATCCGAATTTGT....................................................................................................................	22	1	1.00	1	1	0
.............................................................................................................................CCCTGTAGATCCGAATTTGTTG..................................................................................................................	22	1	1.00	1	0	1
..........................................................................................................................................................................TCGGTTCTAGAGAGGTTTG........................................................................	19	1	1.00	1	0	1
.........................................................................................................................................................................TTCGGTTCTAGAGAGGTT..........................................................................	18	1	1.00	1	0	1
...............................................................................................................................CTGTAGATCCGAATTTGTT...................................................................................................................	19	1	1.00	1	0	1
.......................................................................................................................................................................AATTCGGTTCTAGAGAGGTTTGT.......................................................................	23	1	1.00	1	1	0
............................................................................................................................ACCCTGTAGATCCGAATTTGTTGTA................................................................................................................	25	1	1.00	1	1	0
.............................................................................................................................CCCTGTAGATCCGAATTTG.....................................................................................................................	19	1	1.00	1	0	1

dsi-mir-10

3R:2666360-2666436 -

Known

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-33.7	-33.4	-33.1