ID:

dsi_9977

 Coordinate:

3l:2909202-2909473 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-52.4 -52.3 -52.3

Flybase annnotation

five_prime_UTR [3l_2909474_2909480_+]; CDS [3l_2909481_2909634_+]; exon [3l_2909474_2909634_+]; five_prime_UTR [3l_2908983_2909201_+]; exon [3l_2908983_2909201_+]; intron [3l_2909202_2909473_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTACTTTTTTGACTGCGTGGCTACAAGTTGTGGGCGTGTTCGAATTTCGGGTATGTGCGTACAGTAGAGACTGGCTAGCATGTACTGTACAACGATGTATTGCATACAAGGAGTATCTTCTCTCTGAAGTTTAGTTTTGTTCCTAATTAACTTTCAAAATTATATATCTTTACATCATTTATAAAATAAAAGCTAGAAGGGGGACCACTGTACACAGGTTTATTATAAATATAAAGAGCGGCAATAATTGTAAAGGCTGCGTGTCATAAATAGGGTATAAACCGAATCCAATAGCTATATACGTACGTGGATCTCGTTTCAGCCCAGTCATGTCCAAGTACTTATCTGTCCTACTGCTGTCCGCGGCACTTG
**************************************************((((((((...((((....))))....))))))))((((.((.(((((((.........((((......)))).(((((.((((((........)))))).))))).....))))))))))))).....................((((.((((((((.((((...(((((((..............(((((.............)))))................)))))))...................)))))))).)))).))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
....TTTTTTGACTGCGTGGCTAC............................................................................................................................................................................................................................................................................................................................................................ 20 0 1 3.00 3 2 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................TAGCTATATACGGACG................................................................. 16 1 1 2.00 2 0 0 0 0 1 0 1 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................AGTACTTATCGGTCCTA................... 17 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
..........................................AGTTTCGGGCCTGTGCGTA....................................................................................................................................................................................................................................................................................................................... 19 3 14 1.07 15 14 0 0 0 0 0 0 0 0 0 1
.......................CAAGTTGTGGGCGTGTTCG.......................................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................................TCGGGTATGTGCGTACAGTAG................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................CAAGGAGTACCTTCTCTTTAA..................................................................................................................................................................................................................................................... 21 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................AGTTGTGGGCGTGTTCGAA........................................................................................................................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............TGCGTGGCTACAAGTTGTGGG.................................................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................ACTGGCTAGCATGTACTGTA........................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....TTTGTGACTGCGAGGCTAGA........................................................................................................................................................................................................................................................................................................................................................... 20 3 3 1.00 3 0 0 0 3 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TATAAATATAAGGAGCGGCAA................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................AGTTGTGGGCGTGTTCGAAT....................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................TAGTACTTATCGGTCCT.................... 17 2 5 0.60 3 0 0 3 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................TAAAAGCCCAGTCATGTCCAAGTACT.............................. 26 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
..........................................................................CTACAATGTACGGTACAACGA..................................................................................................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0
...CATTTTTGACTGCATGGCTA............................................................................................................................................................................................................................................................................................................................................................. 20 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
.....TTTTTGACTTCGAGGCTA............................................................................................................................................................................................................................................................................................................................................................. 18 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................TCTGACCTACTACTGTCC.......... 18 2 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0
.........TGACTGCGTGGCTAGA........................................................................................................................................................................................................................................................................................................................................................... 16 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................TGTACAACGGGGTATT............................................................................................................................................................................................................................................................................... 16 2 20 0.20 4 0 0 0 1 0 0 0 0 0 3 0
...........................................GTTTCGGGCCTGTGCGTAC...................................................................................................................................................................................................................................................................................................................... 19 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0
......TTGTGACTGCATGGCTA............................................................................................................................................................................................................................................................................................................................................................. 17 2 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................TCCAAAGGCTGCTTGTCATA........................................................................................................ 20 3 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0
...........................................................................TACAATGGACTGTACAACGA..................................................................................................................................................................................................................................................................................... 20 3 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................TTAGTACTTATCGGTCCTA................... 19 3 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0
..............................................TCGGGCCTGTGCGTAC...................................................................................................................................................................................................................................................................................................................... 16 2 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0
.....TTTTTGACTGCGAGG................................................................................................................................................................................................................................................................................................................................................................ 15 1 16 0.06 1 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................AGTAGCTATATACGGA................................................................... 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................GCTATGTACGGACGTG............................................................... 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................AGCTATATACGGACGGGA.............................................................. 18 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
...........................................................GCCAGTAGAGATTGGCTA....................................................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

AATGAAAAAACTGACGCACCGATGTTCAACACCCGCACAAGCTTAAAGCCCATACACGCATGTCATCTCTGACCGATCGTACATGACATGTTGCTACATAACGTATGTTCCTCATAGAAGAGAGACTTCAAATCAAAACAAGGATTAATTGAAAGTTTTAATATATAGAAATGTAGTAAATATTTTATTTTCGATCTTCCCCCTGGTGACATGTGTCCAAATAATATTTATATTTCTCGCCGTTATTAACATTTCCGACGCACAGTATTTATCCCATATTTGGCTTAGGTTATCGATATATGCATGCACCTAGAGCAAAGTCGGGTCAGTACAGGTTCATGAATAGACAGGATGACGACAGGCGCCGTGAAC
**************************************************((((((((...((((....))))....))))))))((((.((.(((((((.........((((......)))).(((((.((((((........)))))).))))).....))))))))))))).....................((((.((((((((.((((...(((((((..............(((((.............)))))................)))))))...................)))))))).)))).))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 GSM343915
embryo
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 SRR553488
RT_0-2 hours eggs
.............................................................................................................................................................................................................................................................................................................................AAGTGGGGTCAGTAC........................................ 15 1 3 4.00 12 7 2 0 1 0 0 0 2 0 0
...............................................................................................................................................ATTAGTCGAAAGTTTTACTATATA............................................................................................................................................................................................................. 24 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................................GCCGTTATTAACATTTCCGACGC............................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................CAGGATGACGACAGGCGCCGT.... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............GACGCACCGATGTTCAACAC.................................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................AAAGTGGGGTCAGTAC........................................ 16 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................TTAGTTGAAAGTTTTA.................................................................................................................................................................................................................... 16 1 20 0.50 10 0 9 0 0 0 0 0 0 0 1
.............................................................................................................................................................................................................................................................................................................................AAGTTGGGTCAGTAC........................................ 15 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CCTGGTGGCATGTCTCAAAAT...................................................................................................................................................... 21 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................GAAGTGGGGTCAGTAC........................................ 16 2 20 0.30 6 4 2 0 0 0 0 0 0 0 0
...................................................................................TGACCAGTTGCTACATAA............................................................................................................................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................................................................................................................................................................AATAGACAGAATGTCGACAG........... 20 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................ATTAATCGAAAGTTTTA.................................................................................................................................................................................................................... 17 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................GGGTCAGTAGAGGTTCGT................................ 18 2 6 0.17 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................TTAGTCGAAAGTTTTACTATATA............................................................................................................................................................................................................. 23 3 6 0.17 1 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................................TAGTCGAAAGTTTTACTATATA............................................................................................................................................................................................................. 22 3 9 0.11 1 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................AAGTGGGGTCAGTACT....................................... 16 2 20 0.10 2 0 0 0 2 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................AAGTCGGGTCAGTGCT....................................... 16 2 20 0.10 2 0 0 0 2 0 0 0 0 0 0
....................................................................................................................................................TCGAAAGTTTTAATA................................................................................................................................................................................................................. 15 1 20 0.10 2 0 2 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................AAGTCGGGTCAGTAG........................................ 15 1 11 0.09 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................ACAGGATGACGACAA........... 15 1 12 0.08 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................CCCCTAGTGACAAGTGTGC.......................................................................................................................................................... 19 3 19 0.05 1 0 1 0 0 0 0 0 0 0 0
............................................AAAGCCCATGCAGCCATG...................................................................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:2909152-2909523 + dsi_9977 TTACT-TTTTTGACTGCGTGGCTACAAGTT------GTGGGCGTGTT------CGAA--TTTCG--GGTATGTGCGTACAGTAGAGACTGGCTAGCATGTACTGTACAACGATGTATT----------------------GCATACAAGG-----------------AGTATCTTCTC---------------------------------------------------------------------------------------TCTGAAG-------------------TTT--------------------------------------------------------------------------------------------------------------------------AGTTTTGTTCCT--AATTAACTTTCAAAATTATATATCTTTAC------------------------------------------------------------------------------------------------------------------------ATCATTTATAAAATAAAAG-----------CTAGAAG------GGGGACC----------------ACTGTACA--CAGG----------TT------TATTATAAATAT------A-AAGAGCGGCAATAATTGTAAAGGCTGCGTGTCATAAA-TAGGGTATAAACCGAATCCAATAGCTAT----------ATACGTACGTGG-ATCTCGTTTCAGCCCAGT------------CATGTCCAAGTACTTATCTGTCCTACTGCTGTCCGCGG---CACTTG
droSec2 scaffold_2:3045104-3045463 + TTCCT-TTTTTGACTGCGTGGCTACAAGTT------GTGGGCGTGTT------CGAA--TTTCG--GGTATGTGCGTACAGTAGAGACTGGCAT----GTACTGTACAATGATTTATT----------------------GCATACAAGG-----------------AGTATCTTCTC---------------------------------------------------------------------------------------TTTAAAG-------------------TTT--------------------------------------------------------------------------------------------------------------------------AGTCTTGTTCCT--AATTAACTTTCAAAAATTTATA--------------------------------------------------------------------------------------------------------------------------------TCATTTTTAAAATTAAAG-----------CTAGAAG------AGGGACC----------------ACTGTACA--CAGG----------TT------TATTATAAATAT------A-AAAAGCGGCAATAATTGTAAAGGCTGCGTGTCATAAA-TAGCGCATAAACCGAATCCAATAGCCAT----------ATACGTACGTGG-ATCTCGTTTCAGCCCAGT------------CATGTCCAAGTACTTATCTGTCCTACTGCTGTCCGCGG---CACTTG
dm3 chr3L:3042723-3043094 + TTACT-TTTTTGACTGCGTGGCTACAAGTT------GTGGGCGTGTT------CGAA--TTTTG--GGTATGTGCGTACAGTAGAGACTGGCTGACACGGACGGAACAAGGATTTAGT----------------------ACATAGAAGG-----------------AGTATCTTTTC---------------------------------------------------------------------------------------TTTGAAG-------------------TTT--------------------------------------------------------------------------------------------------------------------------AGTTTTGTTCCT--AATTAACATTCAAAATTATATATCTTTAC------------------------------------------------------------------------------------------------------------------------ATAATTTACAAAATTAAAG-----------ATAGTTG------GGCGACC----------------ACTGTACA--CAGA----------TT------TATTATAAATAT------A-AAGAGCGGCAATAATTGTAAAGGCCGCGTGTAATAAA-TAGCGTATAAACCGAATCCAATAGCCAT----------ATACGTACGTGG-ATCTCGTTTCAGCCCAAT------------CATGTCCAAGTACTTATCTGTCCTACTGCTGTCCGCGG---CACTCG
droEre2 scaffold_4784:3058765-3059200 + TTGCT-TTTTTGACTGCGTGGCTACAAGTT------GTGGGCGTGTT------CGAA--TTTAG--GGTATGTGCGTACAGTGAACACCGGCTTGCACGAACTGAATAGGGATTTACT----------------------ACATGGAAGA-----------------AGTATTTTCTC---------------------------------------------------------------------------------------TTTAAAATCAGCA--------------TT----------------------------------AATCAGCACCAGCATTA-----------------------------------------------------------------------AGTTTTGTTTCT--AGTTAGCTTGTTAAATTATATATCTTTACT---------------------------------------------CTTGGATAATGATAACCATTGACTTAT--------------------------------------------------------AATATAAAAGAATAAGATTACATAAATT------GTTGACC----------------ACTGTACT--CGTG----------TT------TATTATAAATATG--TATAAAGAGGCGGCAATAATTGCAAAGTTTGCGTGTCATAAA-TACCGTATAGGCCGAATCCAATAGCAATATA--C-AATATACATACGTGG-ATCTCGTTTCAGCCCAGT------------CATGTCCAAGTACTTATCTGTCCTACTGCTGTTCGTGG---CACTTG
droYak3 3L:8896239-8896637 - TTGCT-TTTTTGACTGCGTGGCTACAAGTT------GTGGGCGTGTT------CGAA--TTTCG--GGTAGGTGCGTACAGTGGACACCGGCTTGCACGGACTGAAAAGGGATTTAGT----------------------GCCTGAAAGA-----------------AATATCTTCTC---------------------------------------------------------------------------------------TTTGTAATCAGTGTCTG--CAAG---AT--------------------------------------------------------------------------------------------------------------------------TGG--------------CAAGCTAGCTAAATTATA--TCTTTACT---------------------------------------------CTTTAAAAATGGTATACATTGATTAAT------------------------------------------------------------TAAATGATTAGGATTATATAGATT------GGTGACC----------------ACTGTACT--GGGG----------TT------TATTATAAATA------TAAAGAGGCGGCAATAATTGTAAGGGTTGCGTGTCATAAA-CACCGTATTAACCGAATCCAATAGCTAT----------ATACATACGTGG-ATCTCGTTTCAGCCCAGT------------CATGTCCAAGTACTTATCACTCCTACTGCTATCCGTGG---CACTTG
droEug1 scf7180000409466:769447-769898 + AAACT-TTTTTGTCTGCGTGGCTTCAAGTT------GTGGGCGTGTT------TCAACTTTTCG--GGTATGTGTATACAGTGGACACCGGATTAAATGGACTGGATAAGGATTAACTG-G-------------------GCATGGAAGA----------------------GTTCCC---------------------------------------------------------------------------------------TTAGGAATCACA---------------------------------CT--------ATATTAGATAATTGTAT-------------TTTGTTATAATGTGATGTCTTGACAGA--------------------------------------GGG--------------A-----------------------------------AAACTAAAAGAGC---AAAATGATC-ATAACTTAGCTC------------------------A--GAATGTAAAGAGTT-TA---TATAGTAAATA----TTTATTAT------------------------------------GT--T----------------CTGTTGTGTTCCACTGTAAG--TAACTA----TAATAATATTAA---TAC------AAAATCGAAGGGGCGTACCAAATTGTACAAGTTGCGTGTCATAAA-CACCGTATAAACCGAATCTAATTGGAATACA--TGTATATACATACGTGG-ATCTCGTTTCAGCCTAGT------------CATGAACAAGTACTTATCTGTTCTACTGCTATCCGTGG---CAATTG
droBia1 scf7180000302428:2385242-2385455 + A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAAAAG-----------ATAGAAA------ACAGGCC------AAGGTTATTCACTGTACC--TATGTATTTCTACGCCTATTAA---TAT------GAAATCGAAGAGGCGGCTGTAATTGCAAAAGTCGCGTGTCATAAA-TGCCGTACAAAGCGAAACTAATTGGAATTA--------GTACCTACGTGG-ATCTCGTTTCAGCCCAGT------------CATGAACAAGTACTTATCTGTGCTACTGCTATCCGTGG---CAATCG
droTak1 scf7180000415378:388124-388629 - A--TT-TTTTTGACTGCGTGGCTTTAAGTT------GTGGGCGTGTT------GAGT--TTTTG--GGTATGTGTGTACAGTGGTAACCGGCTTGGATGGATTCAATGCAAATATGCT----------------------AAATC---------------------------GTCCCC-TAAAAAATTCTGT-------------------------------------------------------------------------TTTAAAA--------------TT---TT----------------AGGAACAATAAATATTTTAAAATTATATTAA-ATCAAATATTTTTCTATCCTAGAATGTTTTAATAAAAATTATTATTTTTAAAACAAAAAGTTTTATTTTT-------------------A-----------------------------------------------TTTAAAAAAATGTTATAAAAACTCAATA------------------------AT--AAAA-ATATTTATGT--------------TTAGTAAAATTTA------------------------------------AAAAAAATCCATTGTTCAATAAACCGGCTACCCACTGTACA--CGGGTA----TTAGTTTATTAA---TAT------AAAATCGAATGGGCGGCAATAATTGTAAAAGTTGCGTGTCATAAA-CACCGTATAACCCGAATCTAATTGCAATATA--T----GTACATACGTGG-ATCTCGTTTCAGCCCAGT------------CATGAACAAGTACTTATCTGTCCTACTGCTATCCGTGG---CACTTG
droEle1 scf7180000491249:2262631-2263125 - AAATTTTTTTTGACTGCGTGGCTACAAGTT------GTGGGCGTGTT------TG------TTG--GGTATGTGTGTACAGTGAATACCAGATATAAAGGACTGAATAGGCTATTCGC---------------------CATATATCAAA----------------AACTTTCTCTGC---------------------------------------------------------------------------------------TTTGAAA-------------------CATAGTTTGATTTTTCTTACTATC-AAAAATATTAGCAACTTGTATCAGTGTCATATAGCCTTTGAAT-TTGAATGTT-TAATAAATAGGTCGATTT---------------------GTCTGAAAT----------TTA-C-----------------------------------GTACTATAAAGGTAATAAAATAATAAACAACTTCGATA------------------------AT--AATAAAAAGGAATGGGTAC--TCCTTAATATAGGATTATTTA------------------------------------AC--AAAGCTGTGGTTC----------------AATAA----------------AAGCTTGTTAA---TAT------AAAATCAAAGGGGCGGTAATAATCGTAAAAGTTGCAT-TCGCAAA-TATGGTATAACCCGATTCTAATTGGAAT----------ATGGATACGTGG-ATCTCGTTTCAGCCCAGT------------CATGTACAAGTACTTATCGGTCCTATTGCTAGCTGCAG---TAGTTG
droRho1 scf7180000777063:219042-219459 - ACATT-TTTTTGACTGCGTGGCTACAAGTT------GTGGGCGTGTT------T-----TTAAG--GGTATGTAAGTACAGTGTATACCAGTTATAATGGATTGGATAGGCA-------------------------------TGG-----------TGTTTCAGTAACTTTGTCAGCCTTCAAAATTGAGGATTTTCCTTTCAATCAATTCACTTCTACCTATAAATATAGCTGAAAACCAATCTTAAATGTTCGAACCTTCTCTACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAAATATAGGTTTATTCA------------------------------------AT--A----------------GAGCTGTTATCTACTGTGGC--TATATA----TAAGCTTGTTAA---TAT------AACATCGAAGGGGCGGCAATAGTTGTAAAAGTTGCGT-TAATAAG-TATGGTAAAAAGCGTATCTAATTGGAAT----------ATTCATACGTGG-ATCTCGTTTCAGCCCAGT------------CATGAACAAGTACTTATCGGTGCTACTGCTATCCGCAG---TAATTG
droFic1 scf7180000454105:1360638-1360997 + CAAT---TTTTGACTGCGTGGCTGCAAGTT------GTGGGCGTGTT------TCTT--TTTTG--AATATGTGAGTACAGTGAAGACAGACTAAAATAGATTCAATAACTA---------------------------------CTC-G-----------------GGACCCTTCTC---------------------------------------------------------------------------------------TTCGTTT-C-TCGACTG--CTAATCCAT--------------------------------------------------------------------------------------------------------------------------TGG--------------AAAAGATAAT--------------------------AAGTTATAAAATA---GAAATATTC-ATTT----------------------------TTTAATAAAATATAAAGTATT-A-------------------------------------------------------------------------------------------------------------GTA----TTAGTTAATAAA---TAT----A-GAAGTTAAAGTGGCGTCAATAACAATATTGGTTGCGTGTCATAAA-AACCGTATAAACCGAATCTAATAAGTGTA---------ATATATACGTGG-ATCTCGTTTCAGCCCAGT------------CATGAACCAGTACTTATCTATCCTACTGCTATCCGCAG---TGATTG
droKik1 scf7180000302441:604123-604532 - AAATT-TTTTTGACTGCGTGGCCAACAGTT------GTGTGTGTGTTCGTGTTATTT-TTTTGG--GGTATGTAA-AGTAGTGGATATTGGCTTGAAAGGATTGGAAA-----TTACTAAAGT--------------------------T-----------------AAAA-----TC---------------------------------------------------------------------------------------TTAATAAAAAGTTTGTGAGAAGT---CT----------------TGGAACA-----------------------------------------CCTTAGAAA-----------------------------------------------------------------------------------C--TCTTCAGTACAAAAAAAAATTATAAAATA---CAAATATA--ATTA----------------------------------------------------------------------TTTATCATTATTTTATT--------------------------------------------------ACTATTATCCACTGTAGCGTCGAG----------TTCATAAA---TA---ATA-G--TTTTTGGGGGCGGCAATAATTGTGAAAATATCGTGTCATAAA-TATCAAATAAAGCGAAACTAATTGGATTATATTTGTACTTACCTACGTGTAATATCGTTTTAGCCGCGT------------CATGCTTAAGCACTTATCAATCCTACTGCTATTGGCGGCAGCATTTG
droAna3 scaffold_13337:9068180-9068532 - AAAT--TTTTTGACTGCGTGGCCGTCAGAACATTTTGTGAAAGTGTG------TGCT--TCTGGTTTGTATGCATGTACAGTGAACACTGGCTTTAGGA-----TACAATAATACACTCAGATAAAAAGGATTA--GGT-TTCTAGCG-G-----------------AGATTATCCTC---------------------------------------------------------------------------------------TTTAAGG-------------------CTT--------------------------------------------------------------------------------------------------------------------------AT--------------TCATCTATCAAAATTATCTCAATTTATT---------------------------------------------G----------------------------------------------------------TAA------------AATATTTATAAAATTATAG-----------TTA-----------GTGAAC----------------ACTGTATA----GC----------TT------T-----------------ACA---------------GTGGGAGTTACCTATAATAAG-TATTGGTTCAACCAAATCTAATTGGAGT----------TCACCTACGTGT-ATTTAATTTCAGCCAAGT------------CATGTTGAAGTACTTATCTGTTCTCCTGCTGGGAGCAG---CCCTCG
droBip1 scf7180000391610:16004-16335 - AAATT-TTTTTGACTGCGTGGCCGCCAGAATATTTTGTGAAAGTGTG------TGCT--TCTGGTTTGTATGCATGTACAGTGAACACTGGCTTTAAGA-----TATAATAACTTACTTAGATAAAATAAAGTAGTGGT-TTCTGGAG-GGGATTGAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCAAGGATTA-----------------------------------------------------------------------AGTC----------------------------------CTTAGC-------------------------------------------------------------------------------------------------CTTAAAATAT------------AATATTTTAAAAATTATAG-----------CTT------------------------------------------------------------GTAAA---CTT-----------TAAA---------------GTGGGAGTTACCTATCATAAA-TCTTGGTTCAGCCAAAGCTAATTGTAGT----------TCACTTACGTGG-ATTTAATTTCAGTCAAGT------------CATGTTGAAGTACTTATCAATTCTTGTGCTGGGTGCAG---CACTCG
dp5 XR_group6:9819956-9820080 + G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCGTGTCGGTAATAATAGTATCAACCGAAACTAATCAA---------------GCCTACGTGT-ATTTCATTTCAGAGAAGTTAGCGAGTGCAACATGTACAAGTACTTAGTCGTCCTACTACTGGCCGCTG---CTATCG
droPer2 scaffold_61:96044-96168 + G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCGTGTCGGTAATAATAGTATCAACCGAAACTAATCAA---------------GCCTACGTGT-ATTTCATTTCAGAGAAGTTAGCGAGTGCAACATGTACAAGTACTTAGTCGTCCTACTACTGGCCGCTG---CTATCG
droWil2 scf2_1100000004511:10911522-10911545 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCACTGCTGTTCGTGG---CTGTGG
droVir3 scaffold_13049:2651603-2651636 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTTAGCGATCCTGCTGCTCGCAGCAG---CAACAG
droMoj3 scaffold_6654:1238955-1239025 - ---------TTGACTGCGTGGCTGTAAATTGCGTTGGTGTGCGTGTT------TGTT--TCTCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-TCTGAGTGGTT-GTGTGTGC---------------------------------------------GTGC
droGri2 scaffold_15110:3645963-3645997 + G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTAGTTGTTCTACTGCTGGCTGTAG---CAGCTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTACT-TTTTTGACTGCGTGGCTACAAGTT------GTGGGCGTGTT------CGAA--TTTCG--GGTATGTGCGTACAGTAGAGACTGGCTAGCATGTACTGTACAACGATGTATT----------------------GCATACAAGG-----------------AGTATCTTCTC---------------------------------------------------------------------------------------TCTGAAG-------------------TTT--------------------------------------------------------------------------------------------------------------------------AGTTTTGTTCCT--AATTAACTTTCAAAATTATATATCTTTAC------------------------------------------------------------------------------------------------------------------------ATCATTTATAAAATAAAAG-----------CTAGAAG------GGGGACC----------------ACTGTACA--CAGG----------TT------TATTATAAATAT------A-AAGAGCGGCAATAATTGTAAAGGCTGCGTGTCATAAA-TAGGGTATAAACCGAATCCAATAGCTAT----------ATACGTACGTGG-ATCTCGTTTCAGCCCAGT------------CATGTCCAAGTACTTATCTGTCCTACTGCTGTCCGCGG---CACTTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....T-TTTTTGACTGCGTGGCTAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00301000000000002000
........................CAAGTT------GTGGGCGTGTT------CG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
.............................................................TCG--GGTATGTGCGTACAGTAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
..........................AGTT------GTGGGCGTGTT------CGAA--....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
..............TGCGTGGCTACAAGTT------GTGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
......................................................................................ACTGGCTAGCATGTACTGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
..........................AGTT------GTGGGCGTGTT------CGAA--T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
droSec2
TTCCT-TTTTTGACTGCGTGGCTACAAGTT------GTGGGCGTGTT------CGAA--TTTCG--GGTATGTGCGTACAGTAGAGACTGGCAT----GTACTGTACAATGATTTATT----------------------GCATACAAGG-----------------AGTATCTTCTC---------------------------------------------------------------------------------------TTTAAAG-------------------TTT--------------------------------------------------------------------------------------------------------------------------AGTCTTGTTCCT--AATTAACTTTCAAAAATTTATA--------------------------------------------------------------------------------------------------------------------------------TCATTTTTAAAATTAAAG-----------CTAGAAG------AGGGACC----------------ACTGTACA--CAGG----------TT------TATTATAAATAT------A-AAAAGCGGCAATAATTGTAAAGGCTGCGTGTCATAAA-TAGCGCATAAACCGAATCCAATAGCCAT----------ATACGTACGTGG-ATCTCGTTTCAGCCCAGT------------CATGTCCAAGTACTTATCTGTCCTACTGCTGTCCGCGG---CACTTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAG-----------CTAGAAG------AGGGACC----------------ACT.......................................................................................................................................................................................................................2111.0010100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGG-ATCTCGTTTCAGCCC..............................................................1911.0010001
.............CTGCGTGGCTACAAGTT------GTGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
..............................................................................................................GATTTATT----------------------GCATACAAGG-----------------AGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTATCTGTCCTACTGCT.................1911.0010010
..............TGCGTGGCTACAAGTT------GTGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
............................TT------GTGGGCGTGTT------CGAA--TTTCG--GCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATTAAAG-----------CTAGAAG------AG...............................................................................................................................................................................................................................................1911.0010010
...................GGCTACAAGTT------GTGGGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000
............ACTGCGTGGCTACAAGTT------GTGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
............ACTGCGTGGCTACAAGTT------GTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.........................AAGTT------GTGGGCGTGTT------CG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGTGG-ATCTCGTTTCAGC................................................................2111.0011000
...............GCGTGGCTACAAGTT------GTGGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
..............TGCGTGGCTACAAGTT------GTGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAATAGCCAT----------ATACGTA...................................................................................2011.0010001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATAAA-TAGCGCATAAACCGAATCCA............................................................................................................2811.0010010
dm3
TTACT-TTTTTGACTGCGTGGCTACAAGTT------GTGGGCGTGTT------CGAA--TTTTG--GGTATGTGCGTACAGTAGAGACTGGCTGACACGGACGGAACAAGGATTTAGT----------------------ACATAGAAGG-----------------AGTATCTTTTC---------------------------------------------------------------------------------------TTTGAAG-------------------TTT--------------------------------------------------------------------------------------------------------------------------AGTTTTGTTCCT--AATTAACATTCAAAATTATATATCTTTAC------------------------------------------------------------------------------------------------------------------------ATAATTTACAAAATTAAAG-----------ATAGTTG------GGCGACC----------------ACTGTACA--CAGA----------TT------TATTATAAATAT------A-AAGAGCGGCAATAATTGTAAAGGCCGCGTGTAATAAA-TAGCGTATAAACCGAATCCAATAGCCAT----------ATACGTACGTGG-ATCTCGTTTCAGCCCAAT------------CATGTCCAAGTACTTATCTGTCCTACTGCTGTCCGCGG---CACTCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCAAGTACTTATCTGTCC........................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GGCTACAAGTT------GTGGGCGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CTACAAGTT------GTGGGCGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000200000000000000000000000000000000000000000
........................CAAGTT------GTGGGCGTGTT------CG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCTACAAGTT------GTGGGCGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000100000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCTACTGCTGTCCGCGG---C.....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GGCGTGTT------CGAA--TTTTG--GG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................ATGTGCGTACAGTAGAGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TACAAGTT------GTGGGCGTGTT------CG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000010000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGTGG-ATCTCGTTTCAG.................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTGTCCTACTGCTGTCCGCGG---C.....2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATCTGTCCTACTGCTGTCC.............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................ATGTGCGTACAGTAGAGACTGGCTGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................ATCTTTTC---------------------------------------------------------------------------------------TTTGAAG-------------------TTT--------------------------------------------------------------------------------------------------------------------------AGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAATTGTAAAGGCCGCGT.........................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
........................................................A--TTTTG--GGTATGTGCGTACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAGTACTTATCTGTCCTACT....................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................AAGGATTTAGT----------------------ACATAGAAGG-----------------A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGCTGTCCGCGG---CACT..1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TAGAAGG-----------------AGTATCTTTTC---------------------------------------------------------------------------------------TTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTATCTGTCCTACTGCTG................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................TTGAAG-------------------TTT--------------------------------------------------------------------------------------------------------------------------AGTTTTGTTCCT--.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................................AA--TTTTG--GGTATGTGCGTACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----------ATACGTACGTGG-ATCTCGT......................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................GTAGAGACTGGCTGACACGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCGAATCCAATAGCCAT----------A.........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAT----------ATACGTACGTGG-A............................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTACTTATCTGTCCT.......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................ACACGGACGGAACAAGGATTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACAAAATTAAAG-----------ATAGTTG------G................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
....................................................................TATGTGCGTACAGTAGAGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------ATACGTACGTGG-ATCTCGTTTCAG.................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................CTGGCTGACACGGACGGAACAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTATCTGTCCTACTGCTGT...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTGCTGTCCGCGG---CACTCG2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGACC----------------ACTGTACA--CAGA----------TT------TATT......................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CAAGTT------GTGGGCGTGTT------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................CTACAAGTT------GTGGGCGTGTT------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCAAGTACTTATCTGTC.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTACTGCTGTCCGCGG---CACT..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GGGCGTGTT------CGAA--TTTTG--G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------ATACGTACGTGG-ATCTCGTTTC...................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GGGCGTGTT------CGAA--TTTTG--GGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...............GCGTGGCTACAAGTT------GTGGGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.........................................................................GCGTACAGTAGAGACTGGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TTGACTGCGTGGCTACAAGTT------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GTGGCTACAAGTT------GTGGGCGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CCT--AATTAACATTCAAAATTA...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................GTT------CGAA--TTTTG--GGTATGTGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCAAGTACTTATCTGTC.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTACGTGG-ATCTCGTTTCAG.................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
.......................ACAAGTT------GTGGGCGTGTT------CGAA--T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AAGTT------GTGGGCGTGTT------CG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............GCGTGGCTACAAGTT------GTGGGCGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTACGTGG-ATCTCGTTTCAG.................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT----------ATACGTACGTGG-ATCTCG.......................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGCCCAAT------------CATGTCCAAGT....................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCGGCAATAATTGTAAAG................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGACC----------------ACTGTACA--CAGA----------..................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCAAGTACTTATCTGTCCTACTGCT.................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................GTGTT------CGAA--TTTTG--GGTATGTGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----------ATACGTACGTGG-ATCTCG.......................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AAGTT------GTGGGCGTGTT------CGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------ATACGTACGTGG-ATCTCGTT.....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................TTTTG--GGTATGTGCGTACAGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...........................GTT------GTGGGCGTGTT------CGAA--TA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCCTACTGCTGTCCGCG..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GGCTACAAGTT------GTGGGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................TGCGTACAGTAGAGACTGGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TGCGTGGCTACAAGTT------GTGGGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................GAAG-------------------TTT--------------------------------------------------------------------------------------------------------------------------AGTTTTGTTCCT--AA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCCTACTGCTGTCCGCGG---CAC...2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT------------CATGTCCAAGTACTTATA.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TGTGCGTACAGTAGAGACTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGAATCCAATAGCCAT----------A.........................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------CATGTCCAAGTACTTATCTGTCCTA......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCGGCAATAATTGTAAA.................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...................GGCTACAAGTT------GTGGGCGTGTT------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
........TTTGACTGCGTGGCTACAAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AGTT------GTGGGCGTGTT------CGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GACTGCGTGGCTACAAGTT------GTGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTATCTGTCCTACTGCTG................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAGTACTTATCTGTCCTACTGC..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTTATCTGTCCTACTGCT.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------------CATGTCCAAGTACTTATCTGTCCT.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AGTT------GTGGGCGTGTT------CGAA--TT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...................GGCTACAAGTT------GTGGGCGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....T-TTTTTGACTGCGTGGCTACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................TGGCTGACACGGACGGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.....................................TGGGCGTGTT------CGAA--TTTTT--TC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droEre2
TTGCT-TTTTTGACTGCGTGGCTACAAGTT------GTGGGCGTGTT------CGAA--TTTAG--GGTATGTGCGTACAGTGAACACCGGCTTGCACGAACTGAATAGGGATTTACT----------------------ACATGGAAGA-----------------AGTATTTTCTC---------------------------------------------------------------------------------------TTTAAAATCAGCA--------------TT----------------------------------AATCAGCACCAGCATTA-----------------------------------------------------------------------AGTTTTGTTTCT--AGTTAGCTTGTTAAATTATATATCTTTACT---------------------------------------------CTTGGATAATGATAACCATTGACTTAT--------------------------------------------------------AATATAAAAGAATAAGATTACATAAATT------GTTGACC----------------ACTGTACT--CGTG----------TT------TATTATAAATATG--TATAAAGAGGCGGCAATAATTGCAAAGTTTGCGTGTCATAAA-TACCGTATAGGCCGAATCCAATAGCAATATA--C-AATATACATACGTGG-ATCTCGTTTCAGCCCAGT------------CATGTCCAAGTACTTATCTGTCCTACTGCTGTTCGTGG---CACTTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............TGCGTGGCTACAAGTT------GTGGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000020
.....................CTACAAGTT------GTGGGCGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCAAGTACTTATCTGTCCT.......................2211.0011000000
................CGTGGCTACAAGTT------GTGGGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTGTCCTACTGCTGTTCGTG..........2311.0010001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCAAGTACTTATCTGTC.........................2211.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTTATCTGTCCTACTGCTGTTC.............2511.0010100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCTACTGCTGTTCGTGG---CACTT.2411.0011000000
droYak3
TTGCT-TTTTTGACTGCGTGGCTACAAGTT------GTGGGCGTGTT------CGAA--TTTCG--GGTAGGTGCGTACAGTGGACACCGGCTTGCACGGACTGAAAAGGGATTTAGT----------------------GCCTGAAAGA-----------------AATATCTTCTC---------------------------------------------------------------------------------------TTTGTAATCAGTGTCTG--CAAG---AT--------------------------------------------------------------------------------------------------------------------------TGG--------------CAAGCTAGCTAAATTATA--TCTTTACT---------------------------------------------CTTTAAAAATGGTATACATTGATTAAT------------------------------------------------------------TAAATGATTAGGATTATATAGATT------GGTGACC----------------ACTGTACT--GGGG----------TT------TATTATAAATA------TAAAGAGGCGGCAATAATTGTAAGGGTTGCGTGTCATAAA-CACCGTATTAACCGAATCCAATAGCTAT----------ATACATACGTGG-ATCTCGTTTCAGCCCAGT------------CATGTCCAAGTACTTATCACTCCTACTGCTATCCGTGG---CACTTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTTATCACTCCTACTGC..................2012.00202000000000
............................TT------GTGGGCGTGTT------CGAA--TTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200000000
..................TGGCTACAAGTT------GTGGGCGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
......................TACAAGTT------GTGGGCGTGTT------CG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
droEug1
AAACT-TTTTTGTCTGCGTGGCTTCAAGTT------GTGGGCGTGTT------TCAACTTTTCG--GGTATGTGTATACAGTGGACACCGGATTAAATGGACTGGATAAGGATTAACTG-G-------------------GCATGGAAGA----------------------GTTCCC---------------------------------------------------------------------------------------TTAGGAATCACA---------------------------------CT--------ATATTAGATAATTGTAT-------------TTTGTTATAATGTGATGTCTTGACAGA--------------------------------------GGG--------------A-----------------------------------AAACTAAAAGAGC---AAAATGATC-ATAACTTAGCTC------------------------A--GAATGTAAAGAGTT-TA---TATAGTAAATA----TTTATTAT------------------------------------GT--T----------------CTGTTGTGTTCCACTGTAAG--TAACTA----TAATAATATTAA---TAC------AAAATCGAAGGGGCGTACCAAATTGTACAAGTTGCGTGTCATAAA-CACCGTATAAACCGAATCTAATTGGAATACA--TGTATATACATACGTGG-ATCTCGTTTCAGCCTAGT------------CATGAACAAGTACTTATCTGTTCTACTGCTATCCGTGG---CAATTGSizeHit CountTotal NormTotal
No Reads
droBia1
A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAAAAG-----------ATAGAAA------ACAGGCC------AAGGTTATTCACTGTACC--TATGTATTTCTACGCCTATTAA---TAT------GAAATCGAAGAGGCGGCTGTAATTGCAAAAGTCGCGTGTCATAAA-TGCCGTACAAAGCGAAACTAATTGGAATTA--------GTACCTACGTGG-ATCTCGTTTCAGCCCAGT------------CATGAACAAGTACTTATCTGTGCTACTGCTATCCGTGG---CAATCGSizeHit CountTotal NormTotal
No Reads
droTak1
A--TT-TTTTTGACTGCGTGGCTTTAAGTT------GTGGGCGTGTT------GAGT--TTTTG--GGTATGTGTGTACAGTGGTAACCGGCTTGGATGGATTCAATGCAAATATGCT----------------------AAATC---------------------------GTCCCC-TAAAAAATTCTGT-------------------------------------------------------------------------TTTAAAA--------------TT---TT----------------AGGAACAATAAATATTTTAAAATTATATTAA-ATCAAATATTTTTCTATCCTAGAATGTTTTAATAAAAATTATTATTTTTAAAACAAAAAGTTTTATTTTT-------------------A-----------------------------------------------TTTAAAAAAATGTTATAAAAACTCAATA------------------------AT--AAAA-ATATTTATGT--------------TTAGTAAAATTTA------------------------------------AAAAAAATCCATTGTTCAATAAACCGGCTACCCACTGTACA--CGGGTA----TTAGTTTATTAA---TAT------AAAATCGAATGGGCGGCAATAATTGTAAAAGTTGCGTGTCATAAA-CACCGTATAACCCGAATCTAATTGCAATATA--T----GTACATACGTGG-ATCTCGTTTCAGCCCAGT------------CATGAACAAGTACTTATCTGTCCTACTGCTATCCGTGG---CACTTGSizeHit CountTotal NormTotal
No Reads
droEle1
AAATTTTTTTTGACTGCGTGGCTACAAGTT------GTGGGCGTGTT------TG------TTG--GGTATGTGTGTACAGTGAATACCAGATATAAAGGACTGAATAGGCTATTCGC---------------------CATATATCAAA----------------AACTTTCTCTGC---------------------------------------------------------------------------------------TTTGAAA-------------------CATAGTTTGATTTTTCTTACTATC-AAAAATATTAGCAACTTGTATCAGTGTCATATAGCCTTTGAAT-TTGAATGTT-TAATAAATAGGTCGATTT---------------------GTCTGAAAT----------TTA-C-----------------------------------GTACTATAAAGGTAATAAAATAATAAACAACTTCGATA------------------------AT--AATAAAAAGGAATGGGTAC--TCCTTAATATAGGATTATTTA------------------------------------AC--AAAGCTGTGGTTC----------------AATAA----------------AAGCTTGTTAA---TAT------AAAATCAAAGGGGCGGTAATAATCGTAAAAGTTGCAT-TCGCAAA-TATGGTATAACCCGATTCTAATTGGAAT----------ATGGATACGTGG-ATCTCGTTTCAGCCCAGT------------CATGTACAAGTACTTATCGGTCCTATTGCTAGCTGCAG---TAGTTGSizeHit CountTotal NormTotal
No Reads
droRho1
ACATT-TTTTTGACTGCGTGGCTACAAGTT------GTGGGCGTGTT------T-----TTAAG--GGTATGTAAGTACAGTGTATACCAGTTATAATGGATTGGATAGGCA-------------------------------TGG-----------TGTTTCAGTAACTTTGTCAGCCTTCAAAATTGAGGATTTTCCTTTCAATCAATTCACTTCTACCTATAAATATAGCTGAAAACCAATCTTAAATGTTCGAACCTTCTCTACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAAATATAGGTTTATTCA------------------------------------AT--A----------------GAGCTGTTATCTACTGTGGC--TATATA----TAAGCTTGTTAA---TAT------AACATCGAAGGGGCGGCAATAGTTGTAAAAGTTGCGT-TAATAAG-TATGGTAAAAAGCGTATCTAATTGGAAT----------ATTCATACGTGG-ATCTCGTTTCAGCCCAGT------------CATGAACAAGTACTTATCGGTGCTACTGCTATCCGCAG---TAATTGSizeHit CountTotal NormTotal
No Reads
droFic1
CAAT---TTTTGACTGCGTGGCTGCAAGTT------GTGGGCGTGTT------TCTT--TTTTG--AATATGTGAGTACAGTGAAGACAGACTAAAATAGATTCAATAACTA---------------------------------CTC-G-----------------GGACCCTTCTC---------------------------------------------------------------------------------------TTCGTTT-C-TCGACTG--CTAATCCAT--------------------------------------------------------------------------------------------------------------------------TGG--------------AAAAGATAAT--------------------------AAGTTATAAAATA---GAAATATTC-ATTT----------------------------TTTAATAAAATATAAAGTATT-A-------------------------------------------------------------------------------------------------------------GTA----TTAGTTAATAAA---TAT----A-GAAGTTAAAGTGGCGTCAATAACAATATTGGTTGCGTGTCATAAA-AACCGTATAAACCGAATCTAATAAGTGTA---------ATATATACGTGG-ATCTCGTTTCAGCCCAGT------------CATGAACCAGTACTTATCTATCCTACTGCTATCCGCAG---TGATTGSizeHit CountTotal NormTotal
No Reads
droKik1
AAATT-TTTTTGACTGCGTGGCCAACAGTT------GTGTGTGTGTTCGTGTTATTT-TTTTGG--GGTATGTAA-AGTAGTGGATATTGGCTTGAAAGGATTGGAAA-----TTACTAAAGT--------------------------T-----------------AAAA-----TC---------------------------------------------------------------------------------------TTAATAAAAAGTTTGTGAGAAGT---CT----------------TGGAACA-----------------------------------------CCTTAGAAA-----------------------------------------------------------------------------------C--TCTTCAGTACAAAAAAAAATTATAAAATA---CAAATATA--ATTA----------------------------------------------------------------------TTTATCATTATTTTATT--------------------------------------------------ACTATTATCCACTGTAGCGTCGAG----------TTCATAAA---TA---ATA-G--TTTTTGGGGGCGGCAATAATTGTGAAAATATCGTGTCATAAA-TATCAAATAAAGCGAAACTAATTGGATTATATTTGTACTTACCTACGTGTAATATCGTTTTAGCCGCGT------------CATGCTTAAGCACTTATCAATCCTACTGCTATTGGCGGCAGCATTTGSizeHit CountTotal NormTotal
No Reads
droAna3
AAAT--TTTTTGACTGCGTGGCCGTCAGAACATTTTGTGAAAGTGTG------TGCT--TCTGGTTTGTATGCATGTACAGTGAACACTGGCTTTAGGA-----TACAATAATACACTCAGATAAAAAGGATTA--GGT-TTCTAGCG-G-----------------AGATTATCCTC---------------------------------------------------------------------------------------TTTAAGG-------------------CTT--------------------------------------------------------------------------------------------------------------------------AT--------------TCATCTATCAAAATTATCTCAATTTATT---------------------------------------------G----------------------------------------------------------TAA------------AATATTTATAAAATTATAG-----------TTA-----------GTGAAC----------------ACTGTATA----GC----------TT------T-----------------ACA---------------GTGGGAGTTACCTATAATAAG-TATTGGTTCAACCAAATCTAATTGGAGT----------TCACCTACGTGT-ATTTAATTTCAGCCAAGT------------CATGTTGAAGTACTTATCTGTTCTCCTGCTGGGAGCAG---CCCTCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTATCTGTTCTCCTGCTGGGA.............2211.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGGAGT----------TCACCTACGTGT-ATTT.........................................................................2511.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATCTGTTCTCCTGCTGGGA.............2111.001010000
...................GGCCGTCAGAACATTTTGTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGTTCTCCTGCTGGG..............1811.001100000
...............................ATTTTGTGAAAGTGTG------TGCT--....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACTTATCTGTTCTCCTGCTGGGA.............2611.001000100
.AAT--TTTTTGACTGCGTGGCCGTCAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..AT--TTTTTGACTGCGTGGCCGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
droBip1
AAATT-TTTTTGACTGCGTGGCCGCCAGAATATTTTGTGAAAGTGTG------TGCT--TCTGGTTTGTATGCATGTACAGTGAACACTGGCTTTAAGA-----TATAATAACTTACTTAGATAAAATAAAGTAGTGGT-TTCTGGAG-GGGATTGAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCAAGGATTA-----------------------------------------------------------------------AGTC----------------------------------CTTAGC-------------------------------------------------------------------------------------------------CTTAAAATAT------------AATATTTTAAAAATTATAG-----------CTT------------------------------------------------------------GTAAA---CTT-----------TAAA---------------GTGGGAGTTACCTATCATAAA-TCTTGGTTCAGCCAAAGCTAATTGTAGT----------TCACTTACGTGG-ATTTAATTTCAGTCAAGT------------CATGTTGAAGTACTTATCAATTCTTGTGCTGGGTGCAG---CACTCGSizeHit CountTotal NormTotal
No Reads
dp5
G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCGTGTCGGTAATAATAGTATCAACCGAAACTAATCAA---------------GCCTACGTGT-ATTTCATTTCAGAGAAGTTAGCGAGTGCAACATGTACAAGTACTTAGTCGTCCTACTACTGGCCGCTG---CTATCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTAGTCGTCCTACTACTGGCCGC...........2612.0020200000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGTACTTAGTCGTCCTACTAC..................2511.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGCGAGTGCAACATG...........................................1811.0010010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTAGTCGTCCTACTACTGGCC.............2411.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGTCCTACTACTGGCC.............1911.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTACTGGCCGCTG---CTAT..2011.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCTACTACTGGCCGCTG---CTA...2211.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTACTGGCCGCTG---CTATC.2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACATGTACAAGTACTTAGTCGTCC........................2811.0010100000000
droPer2
G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCGTGTCGGTAATAATAGTATCAACCGAAACTAATCAA---------------GCCTACGTGT-ATTTCATTTCAGAGAAGTTAGCGAGTGCAACATGTACAAGTACTTAGTCGTCCTACTACTGGCCGCTG---CTATCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAGTCGTCCTACTACTGGCC.............2213.003300000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAAGTACTTAGTCGTC.........................1912.002200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAACATGTACAAGTACTTAGTCGTC.........................2812.002200000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAAGTACTTAGTCGTCCTACT....................2411.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGTACTTAGTCGTCC........................1911.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACTTAGTCGTCCTACTACTGGC..............2511.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTAGTCGTCCTACTACTGGCC.............2311.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGTCCTACTACTGGCC.............1911.001001000
droWil2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCACTGCTGTTCGTGG---CTGTGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTTAGCGATCCTGCTGCTCGCAGCAG---CAACAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTTAGCGATCCTGCTG...................1811.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
---------TTGACTGCGTGGCTGTAAATTGCGTTGGTGTGCGTGTT------TGTT--TCTCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-TCTGAGTGGTT-GTGTGTGC---------------------------------------------GTGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................GTTGGTGTGCGTGTT------TGTT--TCTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.......................GTAAATTGCGTTGGTGTGCGTGTT------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
.......................GTAAATTGCGTTGGTGTGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
droGri2
G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTAGTTGTTCTACTGCTGGCTGTAG---CAGCTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 01:41 PM