ID:

dsi_9961

 Coordinate:

3r:1237707-1237856 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-35.0 -34.9 -34.9

Flybase annnotation

Antisense to intron [3r_1236968_1243622_-]

No Repeatable elements found

Sense Strand Reads

TGCGCTGCGCTGGCACTTCGTTGGAGTGAGGGAGACGGAGGAGCTGAGCGGTACGGTACACGAAGTCGCGCATGACGCGGCGCCCTGGAAAATTGCATTTTCGTACGCTTCGAGCGCGTAATTTATGCCCGAAATGCTGGCCAATTTCAATTTGTTGGCCTGAATGCGACGAGCGTGTGTGGGTGTGTGTGCGTGAGTGGGAAAAGTGCCTGGAAAAGTGCGTAGAAATCGACAATCGTTTTGTTTGCCC
************************************************************......(((((.(((.((((((...((........))....))).))).))).))))).....(((((.((...(((.(((((((........))))))).....))).)).)))))..*********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 O002
Head
 M025
embryo
 M053
female body
 SRR902009
testis
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
...........................................................ACGATGTCGCGCATGACG............................................................................................................................................................................. 18 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TTGGCCTGAATGCGACGAGCGTGTG....................................................................... 25 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
..................................ACGGAGGAGCTGAGCGGTACGT.................................................................................................................................................................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................TTTGTTGGCCTGAATGCGACGAGCGTG......................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................CGAAGTCGCGCATGACGC............................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................GAGGGAGACGGAGGAGCTGAGCGGT...................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................TGCGACGAGCGTGTGTGGGTG................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TGGAAAAGTGCGTAGAAATCGACAAT.............. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................TTGTTGGCCTGAATGCGACGAGCGTGTG....................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGCGTAGAAATCGACAATCGTTTTGTT..... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........GCTGGCACTTCGTTGGAG................................................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................AATTTGTTGGCCTGAATGCG.................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
..........................TGAGGGAGACGGAGGAGC.............................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
......................................AGGAGCTGAGCGGTACGG.................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................GAGGGAGACGGAGGAGCTGA........................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AATTTCAATTTGTTGGCCTGAATGC................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................GTGCCTGGAAAAGTGCGTAGAA....................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................TGCGCCGAGCGCGTGTGGGG.................................................................. 20 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0
...................................................................................................................................................................................TGGGTGTGTGTGCGTGAGT.................................................... 19 0 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0
..........................................................................................................GCGTCGGGCGCGTAATT............................................................................................................................... 17 2 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................AAGGGCGTAGTAATCGA.................. 17 2 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................GTTGGCCTAAATTCGAAGAG............................................................................. 20 3 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................TGGAGCTGAGAGGTACAGT................................................................................................................................................................................................. 19 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 1
.......CTCTGGCACTCCGTTGGA................................................................................................................................................................................................................................. 18 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................TGAGGCAGACGGGGGAACT............................................................................................................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................GTGTGTGTGCGTGAGTG................................................... 17 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................TGGAGTGACGTAGACG..................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

ACGCGACGCGACCGTGAAGCAACCTCACTCCCTCTGCCTCCTCGACTCGCCATGCCATGTGCTTCAGCGCGTACTGCGCCGCGGGACCTTTTAACGTAAAAGCATGCGAAGCTCGCGCATTAAATACGGGCTTTACGACCGGTTAAAGTTAAACAACCGGACTTACGCTGCTCGCACACACCCACACACACGCACTCACCCTTTTCACGGACCTTTTCACGCATCTTTAGCTGTTAGCAAAACAAACGGG
***********************************************************************......(((((.(((.((((((...((........))....))).))).))).))))).....(((((.((...(((.(((((((........))))))).....))).)).)))))..************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
.........................................................................................CTAAACATAAAAGCATGCGAAG........................................................................................................................................... 22 3 5 0.20 1 1 0
..................................................................GCGCGGGCTGCGACGCGGGA.................................................................................................................................................................... 20 3 6 0.17 1 1 0
......................................................................................................................................................................................................................................CTGCTAGCAAAACAA..... 15 1 14 0.07 1 0 1
.......GCGACCGTGAAGGAATCTA................................................................................................................................................................................................................................ 19 3 20 0.05 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:1237657-1237906 + dsi_9961 TGCGCTGCGCTGGCACTTCGT--------------------------------TG--GAGTGAGGGAGACG---GA-------------GGAGCTGA---GCGGTACGGTA-----------CACG-AAGTCGCGCATGACGCGGCGCCCTGGAAAATTGCATTTTCGTACGCTTCGAGCGCGTAATTTATGCCCGAAATGCTGGCCAATTTCAATTTGTTGGCCTGAATGC-----GACGAG--------CGTGTGTGGGT--------GTGT----GTGCGTGAGTG------------GGAAAA--GTGCCTGGAAAAGTGCGT---------AGAAATCG--------------------------------ACAATC--------------GTTTTGTTTGCCC------------
droSec2 scaffold_6:1457168-1457425 + TGCGCTGCGCTGGCACTTCGT--------------------------------TG--GAGTGAGGGAGACG---GA-------------GGAGCTGA---GCGGTACGGTA-----------CACG-AAGTCGCGCATGACGCGGCGCCCTGGAAAATTGCATTTTCGTACGCTTCGAGCGCGTAATTTATGCCCGAAATGCTGGCCAATTTCAATTTGTTGGCCTGAATGC-----GACGAG--------CGTGTGTGGGTGTGTGGGTGTGT----GTGCGTGAGTG------------GGAAAA--GTGCCTGGAAAAGTGCGT---------AGAAATCG--------------------------------ACAATC--------------GTTTTGTTTGCCC------------
dm3 chr3R:1342910-1343147 + TGCGCTGCGCTGGCACTTCGT--------------------------------TG--GAGTGAGGGAGACG---GA-------------GGAGCTGA---GCGGTACGGTA-----------CACG-AAGTCGCGCATGACGCGGCGCTCTGGAAAATTGCATTTTCATACGCCTTGAGCGCGTAATTTATGCCCGAAATGCTGGCCAATTTCAATTTGTTGGCCTAAACGC-----GACGTG--------CGTGTGTGGGT--------GTGT----GTGCGTGATTG--------------------------GGAAAAGTGCGT---------AGAAATCG--------------------------------ACAATC--------------GTTTTGTTTGCCC------------
droEre2 scaffold_4770:1610673-1610920 + TGCGCTGCGCTGGCACTTCGT--------------------------------TG--GAGTGAGGGAGACG---GA-------------GGAGCTGA---GCGGTACGGCA-----------CACG-ACGTCGCGCATGACGCGGCTCCCTGGAAAATTGCATTTTCGTACACTTCGAGCGGGTAATTTATGCCCGAAATGCTGGCCAA------TTTGTTCGCCTGAACGC-----CACGGG--------CCTGTGTGGGT--------GTGGGTGTATGCGTGAGTG------------TGAAAA--GTGCCTGGAAAAGTGCGT---------AGAAATCG--------------------------------ACAATC--------------GTTGTGGTTGCTT------------
droYak3 3R:1751229-1751433 + TGCGCTGCGCTGGCACTTCGT--------------------------------TG--GAGTGAGGGAGACG---GA-------------GGAGCTGA---GCGGTACGGTA-----------CACG-ACGTCGCGCATGACGCGGCGCCCTGGAAAATTGCATTTTCGTACGCTTCGAGAGGGTAATTTG--CCCGAAATGCTGGCCAA------TTTGTTGGCCTGAACGC-----CACGGG--------CGTGTGTGA--------------------------------------------------------GAAAAGTGCGT---------AGAAATC-----------------------------------------------------GTTTTGTTTGCTT------------
droEug1 scf7180000409766:285904-286137 + TGCGCTGCGCTGGCACTTCGT--------------------------------TG--GAGAGAGGGAGACG---GA-------------GGAG--------C-----GGTA-----------CACG-ACTTCGTGCATGACGCGGCGCCCTGGAAAATTGCATTTTCATACGGTTCGAG---CTAATTTATCGCCGAAATGATGGTCAA------TTTATTGGCCTGAGTGC-----GGAGGGCGAGTGGGCGTGTGT----------------------AA----A------------TGA-AAAA--GTGGCTGGAAAAGTGCGA---------AGAAATCG--------------------------------ACAATCG-----TGTTGCGCGTTTTGTTTGCCTT-----------
droBia1 scf7180000301786:24152-24380 - TGCGCTGCGCTGGCACTTCGT--------------------------------TG--GAGAGAGGGAGACG---GA-------------GGAG--------C-----GCTA-----------CGCG-A-GTCGTGCATGACGCGGCGCCCTGGAAAATTGCATTTTCATACGCTTCGAGTG-GTAATTTATCGCCGAAATGATGGCAAA------TTTATTGGCCTGAGTGC-----GGTGGG--------CGTGTGGGA-----------------------AAAG------------TGGAAAAA--GTGCCTGGAAAAGTGCGA---------AGAAATCG--------------------------------ACAATCG------GTTGTGCGTTTTGTTTGCCT------------
droTak1 scf7180000415754:468920-469151 - TGCGCTGCGCTGGCACTTCGG--------------------------------TG--GATAGAGGGAGACG---GA-------------GGAG--------C-----GGTA-----------CACG-ACTTCGTGCATGACGCGGCGCCCTGGAAAATTGCATTTTCATACGGTTCGAGTGGATAATTTATCGCCGAAATGATGGCCAA------TTTATTGGCCTGAATGC-----GGTGGG--------CGTGGGGAA-----------------------AAAG------------TGAAAAAA--GTGCCTGGAAAAGTGCGA---------AGAAATCG--------------------------------ACAATCG-----TGTTGTGCGTTTTGTTTGCCT------------
droEle1 scf7180000491021:110462-110708 - TGCGCTGCGCTGGCACTTCGT--------------------------------TGGAGAAAGGGGGAATCG---GA-------------GGAG--------C-----ACTA-----------CACG-ACTTCGTGCATGACGCGGCGCCCTGGAAAATTGCATTTTCATACGGTTCGAGCCGCTAATTTATCGCCGAAATGATGGCTAA------TTTATTGGCCTGAATGCGGTGTGGTGGG--------CGTGTGTCAGT--------GTG--------A----G------------TGT-AAAA--GTGGCTGGAAAAGTGCGA---------ACAAATCG--------------------------AAATCG-AAATCG-----AGTTGCGCGTTTTGTTTGCCTT-----------
droRho1 scf7180000771409:757-992 + TGCGCTGCGCTGGCACTTCGT--------------------------------TGTGGAACGGGGGAAACG---GA-------------GGAG--------C-----GGTA-----------CACG-ACGTCGTGCATGACGCGGCGCCCTGGAAAATTGCATTTTCATACGGTTCGAGCCGCTAATTTATCGCCGAAATGATGGCTAA------TTTATTGGCCTGAATGTGGTGCGGTGGG--------CGTGTGT----------------------GA----G------------TGA-AAAA--GTGGCTGGAAAAGTGCGA---------AGAAATCG--------------------------------ACAATCG-----AGCTGCGCGTTTTGTTTGCCTT-----------
droFic1 scf7180000453850:739399-739628 + TGCGCTGCGCTGGCACTTCGG--------------------------A-----CG--GGGAGAGGAAGACG---G--------------GAAG--------C-----GGAA-----------CACG-ACTTCGTGCATGACGCGGCGCCCTGGAAAATTGCATTTTCGTACGCTTGTAGCGGCTAATTTATCGCCGA-ATGATGGCCAA------TTTGTTGGCCTAAAAGC-----TGTGGG--------TGTGTTT----------------------GA----G------------TGAAAAAATTGTGCTTGGAAAAGTGCGA---------AGAAATCG--------------------------------ACAATCG-----CGTTGCGCGTTTTGTTTGCCT------------
droKik1 scf7180000302461:765813-766095 + TGCGCTGCGCTGGCACTTCGG--------------------------------TG--GTGAGA--GGGACG---GA-------------ACAGCGGACGGACGGTACGA-------------CTCGCTCTTCGCGCATGACGCGGCGCCCTGGAAAATTGCACTTTCGTACGGTTCGCGCGGCTAATTTATGGCCAAAATGATGGCCAA------TTTATCGGCCTGAATGC-----GGTGGG--------CG-GTGTGAGT--------GTG----------------------------A-GTTT--GTGCCTGGAAAAGTGCGATATGTGCGAAAAGCT-GCGGC-TCGGAAGCGAAATCGTTTGAGAAATCGACTGTCGAGCTGCGTTGCGCGTTTTGTTTGCCT------------
droAna3 scaffold_13340:3851786-3852045 - CGCGCTGCGCTGGCACATTGG--------------------------------TG--GA---AAAGAGACGCCTGTGAAGG--------GGA--------GCGGA-----AGCAACT-----CTCGGTTTTCGTGCATGACGCGGCGCTCTGGAAAATTGCATTTTCATACGGTTCGAGCAGCTAATTTATCGCCGAAATAATGGCCAA------TTTATTGGCCTGAAAGC-----GGTGGG--------CGTGGGCC----------------------------------------CGAAAAAA--GTGTCTGGAAAAGTGCGA---------AAAA-----------------------GCTTGGAAAATCGGCTATCG-----CGTTGTGCGTTTTGTTTGCTTTGCTGCTCTGCC
droBip1 scf7180000396570:656234-656492 + CGCGCTGCGCTGGCACATCGG--------------------------------TG--GAAAA---GAGACGACTGTGAAGG--------GGA--------GCGGA-----AGCAACT-----CTCGGTTTTCGTGCATGACGCGGCGCCCTGGAAAATTGCATTTTCATACGGTTCGAGCAGCTAATTTATCGCCGAAATAATGGCCAA------TTTATTGGCCTGAATGC-----GGTGGG--------CGTGGGCC----------------------------------------CGA-AAAA--GTGTCTGGAAAAGTGCGA---------AAA-----------------C------GCTTGGAAAATCGGCTATCG-----CGTTGTGCGTTTTGTTTGCTTTGCTGCTCTGCC
dp5 2:21259326-21259608 - TCGGTCGCGCTGCCACTGTGACGTCGTTGTTTTCCGCCTTATCACGCACACGCTG--GCAAAA-----------------CGGGGCGCAACA------------------ACCAAATCGGTTC----AGTT------------CGTGCGCTGGAAAATTACATTTCCATACGGGTTAAGAAGCTAATTTATGGTTGAAATAATGGCCAA------TTCGTTGGCCCGCAGTC-----GGTGGG--------CGTGAGCC-----------G----TGC-CCCACAAATTGGAAATGTGC-------------AGTGGAAAAGTGAGA---------AAAATT-GCAATTTCGGAAACGAA------TGAAAAATTGCCTATCG-----CGTTGCGCGTTTTGTTT----------------
droPer2 scaffold_3:4040746-4041027 - TCGGTCGCGCTGCCACTGTGACGTCGTTGTTTTCCGCCTTATCACGCACACGCTG--GCAAAA-----------------CGGGGCGCAACA------------------ACCAAATCGGTTC----AGTT------------CGTGCGCTGGAAAATTACATTTTCATACGGGTTAAGAAGCTAATTTATGGTTGAAATAATGGCCAA------TTCGTTGGCCCGCAGTC-----GGTGGG--------CGTGAGCC-----------G----TGC-CCCACAAATTGGAAATGTGC-------------AGTGGAAAAGTGAGA---------AAAATT-GCAAT-TCGGAAACGAA------TGAAAAATTGCCTATCG-----CGTTGCGCGTTTTGTTT----------------
droVir3 scaffold_13047:16694897-16694910 - C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGTTATTGCCG------------
droMoj3 scaffold_6540:12998008-12998008 - C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGCGCTGCGCTGGCACTTCGT--------------------------------TG--GAGTGAGGGAGACG---GA-------------GGAGCTGA---GCGGTACGGTA-----------CACG-AAGTCGCGCATGACGCGGCGCCCTGGAAAATTGCATTTTCGTACGCTTCGAGCGCGTAATTTATGCCCGAAATGCTGGCCAATTTCAATTTGTTGGCCTGAATGC-----GACGAG--------CGTGTGTGGGT--------GTGT----GTGCGTGAGTG------------GGAAAA--GTGCCTGGAAAAGTGCGT---------AGAAATCG--------------------------------ACAATC--------------GTTTTGTTTGCCC------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................TTGGCCTGAATGC-----GACGAG--------CGTGTG....................................................................................................................................................................2512.00200000000000020000
....................................................................ACG---GA-------------GGAGCTGA---GCGGTACGT........................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
.......................................................................................................................................................................................................................TTTGTTGGCCTGAATGC-----GACGAG--------CGTG......................................................................................................................................................................2711.00100000010000000000
............................................................................................................................CG-AAGTCGCGCATGACGC......................................................................................................................................................................................................................................................................................1811.00101000000000000000
.............................................................GAGGGAGACG---GA-------------GGAGCTGA---GCGGT............................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
.....................................................................................................................................................................................................................................TGC-----GACGAG--------CGTGTGTGGGT--------G......................................................................................................................................................2111.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................TGGAAAAGTGCGT---------AGAAATCG--------------------------------ACAAT........................................2611.00100000001000000000
........................................................................................................................................................................................................................TTGTTGGCCTGAATGC-----GACGAG--------CGTGTG....................................................................................................................................................................2811.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................TGCGT---------AGAAATCG--------------------------------ACAATC--------------GTTTTGTT.................2711.00100000001000000000
........GCTGGCACTTCGT--------------------------------TG--GAG.........................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
.....................................................................................................................................................................................................................AATTTGTTGGCCTGAATGC-----G.......................................................................................................................................................................................2011.00100000100000000000
............................................................TGAGGGAGACG---GA-------------GGAGC.......................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
...........................................................................A-------------GGAGCTGA---GCGGTACGG........................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
.............................................................GAGGGAGACG---GA-------------GGAGCTGA---.................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
...............................................................................................................................................................................................................AATTTCAATTTGTTGGCCTGAATGC-----........................................................................................................................................................................................2511.00101000000000000000
.....................................................................................................................................................................................................................................................................................................................GTGCCTGGAAAAGTGCGT---------AGAA.................................................................................2211.00100010000000000000
.................................................................................................................................................................................................................................................................TGGGT--------GTGT----GTGCGTGAGT.....................................................................................................................................1920.50100000000000001000
....................................................................................................................................................................................................................................................................GT--------GTGT----GTGCGTGAGTG------------........................................................................................................................17200.05100000000001000000
droSec2
TGCGCTGCGCTGGCACTTCGT--------------------------------TG--GAGTGAGGGAGACG---GA-------------GGAGCTGA---GCGGTACGGTA-----------CACG-AAGTCGCGCATGACGCGGCGCCCTGGAAAATTGCATTTTCGTACGCTTCGAGCGCGTAATTTATGCCCGAAATGCTGGCCAATTTCAATTTGTTGGCCTGAATGC-----GACGAG--------CGTGTGTGGGTGTGTGGGTGTGT----GTGCGTGAGTG------------GGAAAA--GTGCCTGGAAAAGTGCGT---------AGAAATCG--------------------------------ACAATC--------------GTTTTGTTTGCCC------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........GGCACTTCGT--------------------------------TG--GAGTGAGGGA..................................................................................................................................................................................................................................................................................................................................................................2212.0020020
..............ACTTCGT--------------------------------TG--GAGTGAGGG...................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...............CTTCGT--------------------------------TG--GAGTGAGGGA..................................................................................................................................................................................................................................................................................................................................................................1811.0010010
................................................................................................................................................................................................................................................................................................................AAA--GTGCCTGGAAAAGTGCGT---------AGA..................................................................................2411.0010010
..........TGGCACTTCGT--------------------------------TG--GAGTG.......................................................................................................................................................................................................................................................................................................................................................................1811.0010010
......................................................................................................................................................................CGTACGCTTCGAGCGCGTAATTTATGCCC..................................................................................................................................................................................................................................2911.0010010
......................................................................................................GGTACGGTA-----------CACG-AAGTCGCG..............................................................................................................................................................................................................................................................................................2111.0010001
...GCTGCGCTGGCACTTCGT--------------------------------TG--GAG.........................................................................................................................................................................................................................................................................................................................................................................2311.0010100
...................GT--------------------------------TG--GAGTGAGGGAGACG---GA-------------GG..........................................................................................................................................................................................................................................................................................................................................2211.0010100
.............................................................................................................................................................................................................................GGCCTGAATGC-----GACGAG--------CGT.......................................................................................................................................................................2011.0010010
.............................................................................................................................................................................................................................GGCCTGAATGC-----GACGAG--------C.........................................................................................................................................................................1811.0010010
........GCTGGCACTTCGT--------------------------------TG--GAGTGA......................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...................................................................................................................................................................................................................................................................................................................................................AATCG--------------------------------ACAATC--------------GTTTTGTTTGCCC------------2411.0010010
dm3
TGCGCTGCGCTGGCACTTCGT--------------------------------TG--GAGTGAGGGAGACG---GA-------------GGAGCTGA---GCGGTACGGTA-----------CACG-AAGTCGCGCATGACGCGGCGCTCTGGAAAATTGCATTTTCATACGCCTTGAGCGCGTAATTTATGCCCGAAATGCTGGCCAATTTCAATTTGTTGGCCTAAACGC-----GACGTG--------CGTGTGTGGGT--------GTGT----GTGCGTGATTG--------------------------GGAAAAGTGCGT---------AGAAATCG--------------------------------ACAATC--------------GTTTTGTTTGCCC------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................A-------------GGAGCTGA---GCGGTACGG........................................................................................................................................................................................................................................................................................................................1819.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000121001000000000000010000
.............CACTTCGT--------------------------------TG--GAGTGAGGGAGACG---...........................................................................................................................................................................................................................................................................................................................................................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ACTTCGT--------------------------------TG--GAGTGAGGG...................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000010100000000000000000000000000000000000000000
..............ACTTCGT--------------------------------TG--GAGTGAGGGA..................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001000000000000000000000000000000000000000000000000200000000000000
......GCGCTGGCACTTCGT--------------------------------TG--GAGTGAG.....................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CGCTGGCACTTCGT--------------------------------TG--GAGTGA......................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GCTGGCACTTCGT--------------------------------TG--GAG.........................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
................................................................................................................................................................................................................................................................................................G--------------------------GGAAAAGTGCGT---------AGAAA................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................................ATGACGCGGCGCTCTGGAAAATT......................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................G--GAGTGAGGGAGACG---GA-------------G...........................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000100000000000000000
..........TGGCACTTCGT--------------------------------TG--GAGTGAGG....................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................GCGGTACGGTA-----------CACG-AAGTCGC...............................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................GGGAGACG---GA-------------GGAGCTGA---GCG..............................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TTCGT--------------------------------TG--GAGTGAGGGAG.................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000001000000000000000000000000000000000000000000
.....TGCGCTGGCACTTCGT--------------------------------TG--GAGTGA......................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GCTGGCACTTCGT--------------------------------TG--GAGTGAGG....................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ATTG--------------------------GGAAAAGTGCGT---------AGAAATCG--------------------------------.............................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000
..............................................................AGGGAGACG---GA-------------GGAGCTG.....................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000
..........................................................................................................................................................................................................................GTTGGCCTAAACGC-----GACGTG--------CG........................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GCGCTGGCACTTCGT--------------------------------TG--GAGTGA......................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGGCACTTCGT--------------------------------TG--GAGTG.......................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................TTGTTGGCCTAAACGC-----GACGTG--------CGTGT.....................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
..............................................................................................................................................CGGCGCTCTGGAAAATTGCATTTTCA.............................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..................CGT--------------------------------TG--GAGTGAGGGAGACG---GA-------------GG..........................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.GCGCTGCGCTGGCACTTC..................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................AAACGC-----GACGTG--------CGTGTGTGG.................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................GA---GCGGTACGGTA-----------CACG-A.....................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................GCGTGATTG--------------------------GGAAAAGTG.................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................GCGCATGACGCGGCGCTCTGGA...........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................................................G--GAGTGAGGGAGACG---GA-------------GGA.........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................CGGCGCTCTGGAAAATTG.....................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................GT--------------------------------TG--GAGTGAGGGAGACG---GA-------------............................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............ACTTCGT--------------------------------TG--GAGTGAGGGAGA................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
............................................................................................................................CG-AAGTCGCGCATGACGCGGCGCTCTGGA...........................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................GTGCGTGATTG--------------------------GGAAAAGTGCGT---------AA...................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................G--------CGTGTGTGGGT--------GTGT----GTGCG..........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................AACGC-----GACGTG--------CGTGTGTGGGT--------G......................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGCGCTGCGCTGGCACTTCGT--------------------------------T...............................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
......................................................................................................................................................................CATACGCCTTGAGCGCGC.............................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CGCTGGCACTTCGT--------------------------------TG--GAGTGAGG....................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TGGGT--------GTGT----GTGCGTGATTG--------------------------..........................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................................................................................................................................................................................................CGTG--------CGTGTGTGGGT--------GTGT----GTGC...........................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.......CGCTGGCACTTCGT--------------------------------TG--GAGTGAG.....................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................AGGGAGACG---GA-------------GGAGCTGA---.................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TTATGCCCGAAATGCTGGCCA.....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................GCGT---------AGAAATCG--------------------------------ACAATC--------------G........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................ATGACGCGGCGCTCTGGAAAA........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................GT--------GTGT----GTGCGTGATTG--------------------------G.........................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............GCACTTCGT--------------------------------TG--GAGTGAA.....................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................AAACGC-----GACGTG--------CGTGTGTGGGT--------GT.....................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
........................................................................................................................................ATGACGCGGCGCTCTGGAAAATTGC....................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................TGA---GCGGTACGGTA-----------CACG-AAGTCG................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................AAACGC-----GACGTG--------CGTGTGTGGGT--------G......................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................................................AGACG---GA-------------GGAGCTGA---GCGGTACGGTA-----------CG.........................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGGCACTTCGT--------------------------------TG--GAGTGAGGG...................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.....................................................TG--GAGTGAGGGAGACG---GA-------------............................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................T--------GTGT----GTGCGTGATTG--------------------------GGAA......................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................GT--------GTGT----GTGCGTGATTG--------------------------GGA.......................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................GGAGACG---GA-------------GGAGCTGA---GC...............................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........GCTGGCACTTCGT--------------------------------TG--GAGTGA......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................GTACGGTA-----------CACG-AAGTCG................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................GGAGCTGA---GCGGTACGGTA-----------CA.........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TGGGT--------GTGT----GTGCGTGATTG--------------------------GGA.......................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......GCGCTGGCACTTCGT--------------------------------TG--GAGTGAGG....................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................GAGACG---GA-------------GGAGCTGA---GCGG.............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................TGGCCTAAACGC-----GACGTG--------CGTGTG....................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CTGGCACTTCGT--------------------------------TG--GAG.........................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................GA---GCGGTACGGTA-----------CACG-AA....................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.......CGCTGGCACTTCGT--------------------------------TG--GAGTGAGGG...................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........TGGCACTTCGT--------------------------------TG--GAGTGAGGGAGAC...............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................CG---GA-------------GGAGCTGA---GCGGTACGGTA-----------CA.........................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................CG---GA-------------GGAGCTGA---GCGGTACGGTA-----------...........................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GCGCTGCGCTGGCACTTCGT--------------------------------TG--GAGTGA......................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................AAGTGCGT---------AGAAATCG--------------------------------AC...........................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................GA-------------GGAGCTGA---GCGGTACGGT.......................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................ACGC-----GACGTG--------CGTGTGTGGGT--------G......................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CGT--------------------------------TG--GAGTGAGGGAGAC...............................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ATTG--------------------------GGAAAAGTGCGT---------AGAAATCG--------------------------------G............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.GCGCTGCGCTGGCACTTCGT--------------------------------TG--GAGTG.......................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................ATGCCCGAAATGCTGGCCAATTTC................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................GACGTG--------CGTGTGTGGGT--------GTG....................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................GCCCGAAATGCTGGCCAA....................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................GAAAAGTGCGT---------AGAAATCG--------------------------------AC...........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................GACGTG--------CGTGTGTGGGT--------G......................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
............................................................................................GCTGA---GCGGTACGGTA-----------CACG-AAGTCG................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
....................................................................................................................................................................................................................................ACGC-----GACGTG--------CGTGTGTGGG................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.....................................................................................................................................................................................................................AATTTGTTGGCCTAAACGC-----GACGTG--------CG........................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................AAACGC-----GACGTG--------CGTGTGTGGGT--------GTGT----...............................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................TGTGTGGGT--------GTGT----GTGCGTGA.......................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................................................................................................................................................................................................................G--------CGTGTGTGGGT--------GTGT----GTGC...........................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
droEre2
TGCGCTGCGCTGGCACTTCGT--------------------------------TG--GAGTGAGGGAGACG---GA-------------GGAGCTGA---GCGGTACGGCA-----------CACG-ACGTCGCGCATGACGCGGCTCCCTGGAAAATTGCATTTTCGTACACTTCGAGCGGGTAATTTATGCCCGAAATGCTGGCCAA------TTTGTTCGCCTGAACGC-----CACGGG--------CCTGTGTGGGT--------GTGGGTGTATGCGTGAGTG------------TGAAAA--GTGCCTGGAAAAGTGCGT---------AGAAATCG--------------------------------ACAATC--------------GTTGTGGTTGCTT------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................................................GAAAA--GTGCCTGGAAAAGTGCGT---------AGA..................................................................................2611.0010000100
........GCTGGCACTTCGT--------------------------------TG--GAG.........................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
..............................................................................................................................................................................................................................................................................................................GAAAA--GTGCCTGGAAAAGTGC................................................................................................2111.0010000010
..................................................................AGACG---GA-------------GGAGCTGA---GCGG.............................................................................................................................................................................................................................................................................................................................1911.0010100000
...............................................................................................................................................................................................................................................................TGTGGGT--------GTGGGTGTATGCGTG........................................................................................................................................2211.0010000100
...................GT--------------------------------TG--GAGTGAGGGAGACG---GA-------------............................................................................................................................................................................................................................................................................................................................................2011.0010000100
................................................................................................................................................................................................................................................................................................................AAA--GTGCCTGGAAAAGTGCGT---------A....................................................................................2211.0010000100
droYak3
TGCGCTGCGCTGGCACTTCGT--------------------------------TG--GAGTGAGGGAGACG---GA-------------GGAGCTGA---GCGGTACGGTA-----------CACG-ACGTCGCGCATGACGCGGCGCCCTGGAAAATTGCATTTTCGTACGCTTCGAGAGGGTAATTTG--CCCGAAATGCTGGCCAA------TTTGTTGGCCTGAACGC-----CACGGG--------CGTGTGTGA--------------------------------------------------------GAAAAGTGCGT---------AGAAATC-----------------------------------------------------GTTTTGTTTGCTT------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
TGCGCTGCGCTGGCACTTC..................................................................................................................................................................................................................................................................................................................................................................................................................1920.50101000000000
...GCTGCGCTGGCACTTCGT--------------------------------TG--GAGTGA......................................................................................................................................................................................................................................................................................................................................................................2620.50100100000000
............................................................................................................................................................................................................................................................................................................................GAAAAGTGCGT---------AGAAATC-----------------------------------------------------GTTTT....................2320.50100000010000
................................................................................................................................................................................................................................................GGG--------CGTGTGTGA--------------------------------------------------------GAAAAA...................................................................................................1820.50101000000000
............................................................................................................................................................ATTGCATTTTCGTACGCTTCGAGAG................................................................................................................................................................................................................................................2520.50100000010000
............GCACTTCGT--------------------------------TG--GAGTGAGGGA..................................................................................................................................................................................................................................................................................................................................................................2120.50100000010000
............................................................................................................................................................................................................................................................................................................................GAAAAGTGCGT---------AGAAATC-----------------------------------------------------GTT......................2120.50100000010000
..............................................................................................................................................................................................................CAA------TTTGTTGGCCTGAACGC-----CACG....................................................................................................................................................................................2420.50101000000000
...........................................................................................AGCTGA---GCGGTACGGTA-----------CACG-ACG...................................................................................................................................................................................................................................................................................................2420.50100100000000
droEug1
TGCGCTGCGCTGGCACTTCGT--------------------------------TG--GAGAGAGGGAGACG---GA-------------GGAG--------C-----GGTA-----------CACG-ACTTCGTGCATGACGCGGCGCCCTGGAAAATTGCATTTTCATACGGTTCGAG---CTAATTTATCGCCGAAATGATGGTCAA------TTTATTGGCCTGAGTGC-----GGAGGGCGAGTGGGCGTGTGT----------------------AA----A------------TGA-AAAA--GTGGCTGGAAAAGTGCGA---------AGAAATCG--------------------------------ACAATCG-----TGTTGCGCGTTTTGTTTGCCTT-----------SizeHit CountTotal NormTotal
No Reads
droBia1
TGCGCTGCGCTGGCACTTCGT--------------------------------TG--GAGAGAGGGAGACG---GA-------------GGAG--------C-----GCTA-----------CGCG-A-GTCGTGCATGACGCGGCGCCCTGGAAAATTGCATTTTCATACGCTTCGAGTG-GTAATTTATCGCCGAAATGATGGCAAA------TTTATTGGCCTGAGTGC-----GGTGGG--------CGTGTGGGA-----------------------AAAG------------TGGAAAAA--GTGCCTGGAAAAGTGCGA---------AGAAATCG--------------------------------ACAATCG------GTTGTGCGTTTTGTTTGCCT------------SizeHit CountTotal NormTotal
No Reads
droTak1
TGCGCTGCGCTGGCACTTCGG--------------------------------TG--GATAGAGGGAGACG---GA-------------GGAG--------C-----GGTA-----------CACG-ACTTCGTGCATGACGCGGCGCCCTGGAAAATTGCATTTTCATACGGTTCGAGTGGATAATTTATCGCCGAAATGATGGCCAA------TTTATTGGCCTGAATGC-----GGTGGG--------CGTGGGGAA-----------------------AAAG------------TGAAAAAA--GTGCCTGGAAAAGTGCGA---------AGAAATCG--------------------------------ACAATCG-----TGTTGTGCGTTTTGTTTGCCT------------SizeHit CountTotal NormTotal
No Reads
droEle1
TGCGCTGCGCTGGCACTTCGT--------------------------------TGGAGAAAGGGGGAATCG---GA-------------GGAG--------C-----ACTA-----------CACG-ACTTCGTGCATGACGCGGCGCCCTGGAAAATTGCATTTTCATACGGTTCGAGCCGCTAATTTATCGCCGAAATGATGGCTAA------TTTATTGGCCTGAATGCGGTGTGGTGGG--------CGTGTGTCAGT--------GTG--------A----G------------TGT-AAAA--GTGGCTGGAAAAGTGCGA---------ACAAATCG--------------------------AAATCG-AAATCG-----AGTTGCGCGTTTTGTTTGCCTT-----------SizeHit CountTotal NormTotal
No Reads
droRho1
TGCGCTGCGCTGGCACTTCGT--------------------------------TGTGGAACGGGGGAAACG---GA-------------GGAG--------C-----GGTA-----------CACG-ACGTCGTGCATGACGCGGCGCCCTGGAAAATTGCATTTTCATACGGTTCGAGCCGCTAATTTATCGCCGAAATGATGGCTAA------TTTATTGGCCTGAATGTGGTGCGGTGGG--------CGTGTGT----------------------GA----G------------TGA-AAAA--GTGGCTGGAAAAGTGCGA---------AGAAATCG--------------------------------ACAATCG-----AGCTGCGCGTTTTGTTTGCCTT-----------SizeHit CountTotal NormTotal
No Reads
droFic1
TGCGCTGCGCTGGCACTTCGG--------------------------A-----CG--GGGAGAGGAAGACG---G--------------GAAG--------C-----GGAA-----------CACG-ACTTCGTGCATGACGCGGCGCCCTGGAAAATTGCATTTTCGTACGCTTGTAGCGGCTAATTTATCGCCGA-ATGATGGCCAA------TTTGTTGGCCTAAAAGC-----TGTGGG--------TGTGTTT----------------------GA----G------------TGAAAAAATTGTGCTTGGAAAAGTGCGA---------AGAAATCG--------------------------------ACAATCG-----CGTTGCGCGTTTTGTTTGCCT------------SizeHit CountTotal NormTotal
No Reads
droKik1
TGCGCTGCGCTGGCACTTCGG--------------------------------TG--GTGAGA--GGGACG---GA-------------ACAGCGGACGGACGGTACGA-------------CTCGCTCTTCGCGCATGACGCGGCGCCCTGGAAAATTGCACTTTCGTACGGTTCGCGCGGCTAATTTATGGCCAAAATGATGGCCAA------TTTATCGGCCTGAATGC-----GGTGGG--------CG-GTGTGAGT--------GTG----------------------------A-GTTT--GTGCCTGGAAAAGTGCGATATGTGCGAAAAGCT-GCGGC-TCGGAAGCGAAATCGTTTGAGAAATCGACTGTCGAGCTGCGTTGCGCGTTTTGTTTGCCT------------SizeHit CountTotal NormTotal
No Reads
droAna3
CGCGCTGCGCTGGCACATTGG--------------------------------TG--GA---AAAGAGACGCCTGTGAAGG--------GGA--------GCGGA-----AGCAACT-----CTCGGTTTTCGTGCATGACGCGGCGCTCTGGAAAATTGCATTTTCATACGGTTCGAGCAGCTAATTTATCGCCGAAATAATGGCCAA------TTTATTGGCCTGAAAGC-----GGTGGG--------CGTGGGCC----------------------------------------CGAAAAAA--GTGTCTGGAAAAGTGCGA---------AAAA-----------------------GCTTGGAAAATCGGCTATCG-----CGTTGTGCGTTTTGTTTGCTTTGCTGCTCTGCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................AA------TTTATTGGCCTGAAAGC-----........................................................................................................................................................................................1912.002000020
..................................................................................................................................................................................................................................................................................................................................................AA-----------------------GCTTGGAAAATCGGCTATCG-----CGTTG............................2711.001100000
................................................................................G--------GGA--------GCGGA-----AGCAACT-----CTCGGTT....................................................................................................................................................................................................................................................................................................2311.001100000
...................................................................................................................................................................................................................................................................................................................................GCGA---------AAAA-----------------------GCTTGGAAAATCGGC...........................................2311.001000001
...........GGCACATTGG--------------------------------TG--GA---AAAG...................................................................................................................................................................................................................................................................................................................................................................1811.001000001
..................................................................................................................................................................................GCAGCTAATTTATCGCCGAA...............................................................................................................................................................................................................................2011.001010000
......................................................................GCCTGTGAAGG--------GGA--------GCGGA-----AGC....................................................................................................................................................................................................................................................................................................................2211.001000010
........GCTGGCACATTGG--------------------------------TG--GA---AAAGAGAC...............................................................................................................................................................................................................................................................................................................................................................2511.001000010
....................G--------------------------------TG--GA---AAAGAGACGCCTGT.........................................................................................................................................................................................................................................................................................................................................................1911.001000001
.............................................................................................................................................................................................................................................................................................................AAAAAA--GTGTCTGGAAAAGTGC................................................................................................2211.001000001
...........................................................................................................................................................................................................................................................................................................................................................................GCTTGGAAAATCGGCTATCG-----CGTT.............................2411.001000010
.....................................................................................................................................................................................................................................................................................................................GTGTCTGGAAAAGTGCGA---------A....................................................................................1911.001000010
............GCACATTGG--------------------------------TG--GA---AAAGA..................................................................................................................................................................................................................................................................................................................................................................1811.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGTTTGCTTTGCTGCTCTGCC2511.001010000
................................................................................................................................................................................................................................CTGAAAGC-----GGTGGG--------CGTGGGCC----------------------------------------..........................................................................................................................2211.001000010
...........GGCACATTGG--------------------------------TG--GA---AAAT...................................................................................................................................................................................................................................................................................................................................................................1820.501000001
droBip1
CGCGCTGCGCTGGCACATCGG--------------------------------TG--GAAAA---GAGACGACTGTGAAGG--------GGA--------GCGGA-----AGCAACT-----CTCGGTTTTCGTGCATGACGCGGCGCCCTGGAAAATTGCATTTTCATACGGTTCGAGCAGCTAATTTATCGCCGAAATAATGGCCAA------TTTATTGGCCTGAATGC-----GGTGGG--------CGTGGGCC----------------------------------------CGA-AAAA--GTGTCTGGAAAAGTGCGA---------AAA-----------------C------GCTTGGAAAATCGGCTATCG-----CGTTGTGCGTTTTGTTTGCTTTGCTGCTCTGCCSizeHit CountTotal NormTotal
No Reads
dp5
TCGGTCGCGCTGCCACTGTGACGTCGTTGTTTTCCGCCTTATCACGCACACGCTG--GCAAAA-----------------CGGGGCGCAACA------------------ACCAAATCGGTTC----AGTT------------CGTGCGCTGGAAAATTACATTTCCATACGGGTTAAGAAGCTAATTTATGGTTGAAATAATGGCCAA------TTCGTTGGCCCGCAGTC-----GGTGGG--------CGTGAGCC-----------G----TGC-CCCACAAATTGGAAATGTGC-------------AGTGGAAAAGTGAGA---------AAAATT-GCAATTTCGGAAACGAA------TGAAAAATTGCCTATCG-----CGTTGCGCGTTTTGTTT----------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................GTTC----AGTT------------CGTGCGCTGGAA..........................................................................................................................................................................................................................................................................2011.0010000001000
...............................................ACACGCTG--GCAAAA-----------------CGGGGC...............................................................................................................................................................................................................................................................................................................................................2011.0010000100000
.................................................................................................................................................................................................................................................................................................................................................................................AAAATTGCCTATCG-----CGTTGCGC.........................2211.0010010000000
................................................................................................................................GTT------------CGTGCGCTGGAAAATTACA...................................................................................................................................................................................................................................................................2211.0010000010000
...............................................................................................................................................................................................................................................................................................................................................................................GAAAAATTGCCTATCG-----CGTTGCGCG........................2511.0010000100000
..GGTCGCGCTGCCACTGTGACG..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.....................................................................................................................................................................................................................................................................................................................................GA---------AAAATT-GCAATTTCGGAAACGA..............................................................2411.0010100000000
.......................................TATCACGCACACGCTG--GCAAAA-----------------CGGGGC...............................................................................................................................................................................................................................................................................................................................................2811.0010100000000
TCGGTCGCGCTGCCACTG...................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
droPer2
TCGGTCGCGCTGCCACTGTGACGTCGTTGTTTTCCGCCTTATCACGCACACGCTG--GCAAAA-----------------CGGGGCGCAACA------------------ACCAAATCGGTTC----AGTT------------CGTGCGCTGGAAAATTACATTTTCATACGGGTTAAGAAGCTAATTTATGGTTGAAATAATGGCCAA------TTCGTTGGCCCGCAGTC-----GGTGGG--------CGTGAGCC-----------G----TGC-CCCACAAATTGGAAATGTGC-------------AGTGGAAAAGTGAGA---------AAAATT-GCAAT-TCGGAAACGAA------TGAAAAATTGCCTATCG-----CGTTGCGCGTTTTGTTT----------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................AATTACATTTTCATACGGG.......................................................................................................................................................................................................................................................1911.001010000
droVir3
C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGTTATTGCCG------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads

Generated: 05/18/2015 at 10:18 AM