ID:

dsi_9959

 Coordinate:

3r:4181802-4182079 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-6.6 -6.4 -5.6

Flybase annnotation

intergenic

No Repeatable elements found

mature
  1. dsi_8022  3r:4178521-4178539 -
  2. dsi_8246  3r:4178800-4178818 -
  3. dsi_8440  3r:4179719-4179737 -
  4. dsi_8440  3r:4179998-4180016 -
  5. dsi_9959  3r:4181957-4181975 -
  6. node_38310:479-497 +
  7. node_45865:73-91 +
  8. node_27127:68-86 -
star
  1. dsi_8022  3r:4178554-4178571 -
  2. 3r:4179426-4179443 -
  3. dsi_8440  3r:4179752-4179769 -
  4. 3r:4181151-4181168 -
  5. dsi_9959  3r:4181990-4182007 -
  6. node_45865:41-58 +
  7. node_27127:101-118 -

Sense Strand Reads

CCGTAGAAAAGGCTTGGCCTCTTGGTAAAAGAAACTTAAAATCCATATAGGTAGGGTGTGTTATAAAACTATCCCAATTCAAAATCGCGTCACATAATAAACAAAAAGTTGAAGCATCTTAAAAGGTCTGATTTTTAGGACATATTCATTTACTTAATAGGTAGGCATTGAACAATTGGTATTTTTATGTGGTATATCTTAGCAACTGCAACATGACCCACAATTATATAAACTGTTAAATAATGGGTATGATTTATCTCGACTACCCCAATGATTATTCTTCGAAAAGGCTTAGCCTCTTGGTAAAATAAACTTAAAATCCCTATAGGTAGGGTGTGATATAAAACTATCCCAATTCAAAATCGCGTCACATAATAA
**************************************************************************************************************************...(((((....(((((.............)))))....))))).......************************************************************************************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 GSM343915
embryo
 M053
female body
 SRR902009
testis
 M024
male body		 SRR553488
RT_0-2 hours eggs
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 O002
Head
..........................................................................................................................................................TAATAGGTAGGCATTGAAC............................................................................................................................................................................................................. 19 0 8 6.25 50 46 1 0 0 3 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AATAGGTAGGCATTGAAC............................................................................................................................................................................................................. 18 0 11 6.00 66 62 1 0 0 2 0 0 0 0 1 0 0 0 0
..........................................................................................................................AAGGTCTGATTTTTAGGA.............................................................................................................................................................................................................................................. 18 0 7 5.00 35 33 2 0 0 0 0 0 0 0 0 0 0 0 0
........................................TTCCATATAGGTAGGGTGTG.............................................................................................................................................................................................................................................................................................................................. 20 1 1 4.00 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TTAATAGGTAGGCATTGAAC............................................................................................................................................................................................................. 20 0 7 2.29 16 15 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................TACTTAATAGGTAGGCATTGAACAA........................................................................................................................................................................................................... 25 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................GTATGATTTATCTCGACT.................................................................................................................. 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................AAAAGGTCTGATTTTTAGGAC............................................................................................................................................................................................................................................. 21 0 7 1.86 13 12 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................ACTTAATAGGTAGGCATTGAAC............................................................................................................................................................................................................. 22 0 6 1.83 11 11 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TTAATAGGTAGGCATTGAACAATCGGTA..................................................................................................................................................................................................... 28 1 4 1.75 7 0 0 0 7 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AGGTCTGATTTTTAGGAC............................................................................................................................................................................................................................................. 18 0 7 1.71 12 11 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................ATAGGTAGGGTGTGTTATA......................................................................................................................................................................................................................................................................................................................... 19 0 2 1.50 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TAATAGGTAGGCATTGAACAATCGGTA..................................................................................................................................................................................................... 27 1 4 1.50 6 0 0 0 6 0 0 0 0 0 0 0 0 0 0
........................................................................................................................AAAAGGTCTGATTTTTAGGA.............................................................................................................................................................................................................................................. 20 0 7 1.29 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AAAGGTCTGATTTTTAGGA.............................................................................................................................................................................................................................................. 19 0 7 1.29 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AACTGCAACATGACCCAC............................................................................................................................................................. 18 0 5 1.20 6 1 0 0 0 0 0 5 0 0 0 0 0 0 0
..........................................................................................................................AAGGTCTGATTTTTAGGAC............................................................................................................................................................................................................................................. 19 0 7 1.14 8 6 0 0 0 0 0 0 0 0 2 0 0 0 0
..GTAGAAAAGGCTTGGCCTCTTGGTA............................................................................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................TCCATATAGGTAGGGTGTGTTATAA........................................................................................................................................................................................................................................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................AACAATCGGTATTTTTATGTGGTATA...................................................................................................................................................................................... 26 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................AGGTAGGCATTGAACAATTGGTATT................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................ACTTAATAGGTAGGCATTGAACAAT.......................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................TAGGTAGGGTGTGTTATAAAA...................................................................................................................................................................................................................................................................................................................... 21 0 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
.........................................TCCATATAGGTAGGGTGTGTT............................................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................ATAGGTAGGCATTGAACAATTGG....................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................AGGCATTGAACAATTGGT...................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AATAGGTAGGCATTGAACAATT......................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TTTATGTGGTATATCTTAGCAACTGC......................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................GATTATTCTTCGAAAAGGCT...................................................................................... 20 0 4 1.00 4 3 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................AATCCATATAGGTAGGGTGTG.............................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................AATTGGTATTTTTATGTGGT......................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................ATTGAACAATTGGTATTTTT................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TATCTTAGCAACTGCAACATGACCC............................................................................................................................................................... 25 0 4 1.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................ATAGGTAGGCATTAAACAATTGG....................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................AATGGGTATGATTTATCTCGACT.................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................CATATAGGTAGGGTGTGT............................................................................................................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................CTTAAAAGGTCTGATTTTTA................................................................................................................................................................................................................................................. 20 0 6 1.00 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................AAGGTCTGATTTTTAGGG.............................................................................................................................................................................................................................................. 18 1 8 1.00 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0
......AAAAGGCTTGGCCTCTTGGTAAAAGAA......................................................................................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................ATTTTTATGTGGTATATCTTAGCAACTG.......................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............TTGGCCTCTTGGTAAAAG........................................................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................CATATAGGTAGGGTGTGTTATAAAACT.................................................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................ATTTATCTCGACTACCCC............................................................................................................. 18 0 4 1.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................TATAGGTAGGGTGTGTTATAAAACT.................................................................................................................................................................................................................................................................................................................... 25 0 2 1.00 2 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................TTAATAGGTAGGCATTGAACAATTG........................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................TACATATAGGTAGGTTGTGTT............................................................................................................................................................................................................................................................................................................................ 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TTTATGTGGTATATCTTAGCA.............................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................TCCCAATTCAAAATCGCGTCACATAA......................................................................................................................................................................................................................................................................................... 26 0 4 0.75 3 0 0 0 0 0 0 3 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................TCCCAATTCAAAATCGCGTCACATAA... 26 0 4 0.75 3 0 0 0 0 0 0 3 0 0 0 0 0 0 0
.................................................................................................................................................................................................ATATCTTAGCAACTGCAACATGACCC............................................................................................................................................................... 26 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................CGACTACCCCAATGATTATTCTTCGAAA........................................................................................... 28 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................CATATTCATTTACTTAATA........................................................................................................................................................................................................................... 19 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................ATAGGTAGGCATTGAACA............................................................................................................................................................................................................ 18 0 12 0.67 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................CATTTACTTAATAGGTAGGC.................................................................................................................................................................................................................... 20 0 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................CTACCCCAATGATTATTCTTCGAAAAG......................................................................................... 27 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................ACTTAAAATCCCTATAGGTAG.............................................. 21 0 5 0.60 3 0 0 0 0 0 0 0 0 0 0 0 0 0 3
........................................................................................................................................................................................................................................................................................................................................GTAGGGTGTGATATAAAAC............................... 19 0 5 0.60 3 0 0 0 0 0 0 3 0 0 0 0 0 0 0
............................................................................................................................................................................................................ACTGCAACATGACCCACA............................................................................................................................................................ 18 0 5 0.60 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................CTTAGCAACTGCAACATGACCC............................................................................................................................................................... 22 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................TATAGGTAGGGTGTGTTATAAAAC..................................................................................................................................................................................................................................................................................................................... 24 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................TATGATTTATCTCGACTACCCCAATGAT....................................................................................................... 28 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................TTACTTAATAGGTAGGCATTGAAC............................................................................................................................................................................................................. 24 0 6 0.50 3 2 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................ATGATTTATCTCGACTACCCCAATGATT...................................................................................................... 28 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................ATAGGTAGGGTGTGTTATAA........................................................................................................................................................................................................................................................................................................................ 20 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................ATAGGTAGGGTGTGTTATAAAACT.................................................................................................................................................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................CTTAATAGGTAGGCATTGAACA............................................................................................................................................................................................................ 22 0 6 0.50 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................ATTATTCTTCGAAAAGGCT...................................................................................... 19 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................ATAGTTAGGGTGTGTTATA......................................................................................................................................................................................................................................................................................................................... 19 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................AATGATTATTCTTCGAAAAGGC....................................................................................... 22 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................CTTAGCAACTGCAACATGACC................................................................................................................................................................ 21 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GGTAGGGTGTGATATAAAACTATCCC......................... 26 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................ATTATTCTTCGAAAAGGCTTAGC.................................................................................. 23 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................ATGATTTATCTCGACTACCCCAATGG........................................................................................................ 26 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................TAGGTAGGGTGTGATATAAAACTAT............................ 25 0 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................TAGGTAGGGTGTGATATAAAACAAT............................ 25 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
....................................................................................TCGCGTCACATAATAAACAAAAAGTTGA.......................................................................................................................................................................................................................................................................... 28 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................................................................................ATTATTCTTCGAAAAGGCTT..................................................................................... 20 0 4 0.50 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................TCTTAGCACTTGCAACTTGACCCACAATT......................................................................................................................................................... 29 3 4 0.50 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................ATTTACTTAATAGGTAGGCATTGAAC............................................................................................................................................................................................................. 26 0 6 0.50 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TATATAAACTGTTAAATAA....................................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................ATATAAACTGTTAAATAATGG.................................................................................................................................... 21 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................ATGATTTATCTCGACTACCCCAAT.......................................................................................................... 24 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GATTTTTAGGACATATTC....................................................................................................................................................................................................................................... 18 0 6 0.50 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................TAGGTAGGGTGTGTTATAAAAC..................................................................................................................................................................................................................................................................................................................... 22 0 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................TTAATAGGTAGGCATTGAACA............................................................................................................................................................................................................ 21 0 7 0.43 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................AAGGTCTGATTTTTAGGACA............................................................................................................................................................................................................................................ 20 0 7 0.43 3 2 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................ACTGCAACATGACCCACAA........................................................................................................................................................... 19 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................ATAGGTAGGGTGTGATATA................................... 19 0 5 0.40 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TAATAGGTAGGCATTGAACA............................................................................................................................................................................................................ 20 0 8 0.38 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................CTTCGAAAAGGCTTAGCCTCTTGGT.......................................................................... 25 0 11 0.36 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................CATTTACTTAATAGGTAG...................................................................................................................................................................................................................... 18 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................ATTCTTCGAAAAGGCTTAGCCTCTTGGC.......................................................................... 28 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................AGTTGAAGCATCTTAAAAGGTCTGATT..................................................................................................................................................................................................................................................... 27 0 6 0.33 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................GGTAGGGTGTGTTATAAAACT.................................................................................................................................................................................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TTACTTAATAGGTAGGCATTGAACA............................................................................................................................................................................................................ 25 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................AATCGCGTCACATAATAAAC.................................................................................................................................................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................CATATTCATTTACTTAATAGGTAG...................................................................................................................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................CTCGACTACCCCAATGATTATTCTTC............................................................................................... 26 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................CTTAATAGGTAGGCATTGAAC............................................................................................................................................................................................................. 21 0 6 0.33 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................CATCTTAAAAGGTCTGATTTTTAGGA.............................................................................................................................................................................................................................................. 26 0 6 0.33 2 0 1 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................AAAATCGCGTCACATAATAAACAAAAA............................................................................................................................................................................................................................................................................... 27 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................CCAATTCAAAATCGCGTCACATAATAAAC.................................................................................................................................................................................................................................................................................... 29 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TTAAAAGGTCTGATTTTTAGGAC............................................................................................................................................................................................................................................. 23 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................TTATTCTTCGAAAAGGCTTAGCCTCT.............................................................................. 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................GTAGGGTGTGATATAAAACTA............................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................ATTCTTCGAAAAGGCTTAGCCTCTTG............................................................................ 26 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TACTTAATAGGTAGGCATTGAAC............................................................................................................................................................................................................. 23 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................ATTCTTCGAAAAGGCTTAGCCTCTTGGTA......................................................................... 29 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TTAAAAGGTCTGATTTTTAGGA.............................................................................................................................................................................................................................................. 22 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................AGGTAGGGTGTGTTATAAAAC..................................................................................................................................................................................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................TATTCTTCGAAAAGGCTTAGCCTCT.............................................................................. 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................................AATCGCGTCACATAATAA 18 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................ATTCTTCGAAAAGGCTTAGCCTCTTGGT.......................................................................... 28 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................AATCGCGTCACATAATAA...................................................................................................................................................................................................................................................................................... 18 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................CATATTCATTTACTTAATAGGTAGGC.................................................................................................................................................................................................................... 26 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................CTTTGAAAAGGCTTAGCCTC............................................................................... 20 1 12 0.33 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................GAAGCATCTTAAAAGGTCT......................................................................................................................................................................................................................................................... 19 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................AAAAGGGCTGATTTTTAGGAC............................................................................................................................................................................................................................................. 21 1 7 0.29 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AAAGGTCTGATTTTTAGGAC............................................................................................................................................................................................................................................. 20 0 7 0.29 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................TAAAAGGTCTGATTTTTAGGAC............................................................................................................................................................................................................................................. 22 0 7 0.29 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AATAGGTAGGCATTGAACA............................................................................................................................................................................................................ 19 0 11 0.27 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................TTTGAAAAGGCTTAGCCTCTTGGTA......................................................................... 25 1 11 0.27 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TAGGTAGGCATTGAACAATCGGTATTTTT................................................................................................................................................................................................ 29 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TTAATAGATAGGCATTGAACAATCGGTA..................................................................................................................................................................................................... 28 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................TTTGAAAAGGCTTAGCCTCTT............................................................................. 21 1 12 0.25 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................TATCCCAATTCAAAATCGCGTCACA...... 25 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................TATCCCAATTCAAAATCGCGTCAC............................................................................................................................................................................................................................................................................................. 24 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................GATTTATCTCGACTACCCCAATG......................................................................................................... 23 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................GATTATTCTTCGAAAAGGCTTAGC.................................................................................. 24 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................ATCCCAATTCAAAATCGCGTCACA............................................................................................................................................................................................................................................................................................ 24 0 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................GGTAGGCATTGAACAATCGGTATTTTTAT.............................................................................................................................................................................................. 29 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................CGAAAAGGCTTAGCCTCTTGGTA......................................................................... 23 0 12 0.25 3 2 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................TATCCTAATTCAAAATCGCGT.......... 21 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................TATCCTAATTCAAAATCGCGT................................................................................................................................................................................................................................................................................................ 21 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................ATAGGTAGGGTGTGATATAAAAC............................... 23 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................CCAATGATTATTCTTCGAAAAG......................................................................................... 22 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................ATCCCAATTCAAAATCGCGTCACATAAT........................................................................................................................................................................................................................................................................................ 28 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TTAGCAACTGCAACATGACC................................................................................................................................................................ 20 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................ATCCCAATTCAAAATCGCGTCACATAAT.. 28 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................AATTCAAAATCGCGTCAC............................................................................................................................................................................................................................................................................................. 18 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................TTATTCTTCGAAAAGGCTTA.................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TAAAACTATCCCAATTCAA........................................................................................................................................................................................................................................................................................................ 19 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................AATGATTATTCTTCGAAAAGGCTTAGC.................................................................................. 27 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................ATCTTAGCAACTGCAACATGACCCACA............................................................................................................................................................ 27 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................AATTCAAAATCGCGTCAC....... 18 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................TAAAACTATCCCAATTCAA.................. 19 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................AAAAGGTCTGATTTTTAGGG.............................................................................................................................................................................................................................................. 20 1 8 0.25 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................TTTATCTCGACTACCCCAAT.......................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TCTTAGCAACTGCAACATGACCCACA............................................................................................................................................................ 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................CTATCCCAATTCAAAATCGCGTC......... 23 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................CCAATGATTATTCTTCGAAAAGAC....................................................................................... 24 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................TTGGTAAAATAAACTTAAAATCCCTA..................................................... 26 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................TAATAGGTAGGCATTGAACAATCGGTAT.................................................................................................................................................................................................... 28 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CATGACCCACAATTATATAAACTG............................................................................................................................................... 24 0 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................ATCCCAATTCAAAATCGCGTCACA...... 24 0 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................................................................................GATTATTCTTCGAAAAGGC....................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................GATTATTCTTCGAAAAGGCTT..................................................................................... 21 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................ATATCTTAGCAACTGCAACATGACCCA.............................................................................................................................................................. 27 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TTAATAGGTAGGCATTGAACAATCGGTAA.................................................................................................................................................................................................... 29 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................CTTAGCAACTGCAACATGACCCACA............................................................................................................................................................ 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................ATGATTATTCTTCGAAAAGGC....................................................................................... 21 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................CATTGAACAATCGGTATTTTT................................................................................................................................................................................................ 21 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................TAGGCATTGAACAATCGGTATTTTTA............................................................................................................................................................................................... 26 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................TATCCCAATTCAAAATCGCGTCAC....... 24 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................ATATCTTAGCAACTGCAACATGACCCACA............................................................................................................................................................ 29 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................TATCCCAATTCAAAATCGCGTCACA............................................................................................................................................................................................................................................................................................ 25 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AACTGCAACATGACCCACAATTATATAAA.................................................................................................................................................. 29 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................ATAGGTAGGCATTGAACAA........................................................................................................................................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................ATTCTTCGAAAAGGCTTAGC.................................................................................. 20 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................CTTCGAAAAGGCTTGGCCTC............................................................................... 20 1 12 0.25 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................CAATGATTATTCTTCGAAAAGGC....................................................................................... 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................ATCTTAGCAACTGCAACATGACC................................................................................................................................................................ 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................CTATCCCAATTCAAAATCGCGTC............................................................................................................................................................................................................................................................................................... 23 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TTAATAGGTAGGCATTGA............................................................................................................................................................................................................... 18 0 9 0.22 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................ACTTAATAGGTAGGCATT................................................................................................................................................................................................................. 18 0 9 0.22 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................AAACTTAAAATCCCTATAGGTAGGGT........................................... 26 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................AGCAACTGCAACATGACCC............................................................................................................................................................... 19 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................AATCCCTATAGGTAGGGTGTGATAT.................................... 25 0 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................ACTGCAACATGACCCACAATT......................................................................................................................................................... 21 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................ATCTTAGCAACTGCAACATG................................................................................................................................................................... 20 0 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................TAGCAACTGCAACATGACCCAC............................................................................................................................................................. 22 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CAACTGCAACATGACCC............................................................................................................................................................... 17 0 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..............................................................................................................................................................................................................................................................................................................GTAAAATAAACTTAAAATCCCT...................................................... 22 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................ATAATAAACAAAAAGTTGAAGC....................................................................................................................................................................................................................................................................... 22 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GCAACTGCAACATGACCCACA............................................................................................................................................................ 21 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................TCTCGACTACCCCAATGATTAT.................................................................................................... 22 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AACAAAAAGTTGGAGCATCTTAAAAGGT........................................................................................................................................................................................................................................................... 28 1 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................CCTCTTGGTAAAATAAACTTAAAATCC........................................................ 27 0 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................................................................................................................................................................................ATCGCGTCACATAATA. 16 0 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................CTATAGGTAGGGTGTGAA...................................... 18 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................ATCTTAGCAACTGCAACATGA.................................................................................................................................................................. 21 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TAGCAACTGCAACATGACCCACAATTA........................................................................................................................................................ 27 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................ATCGCGTCACATAATA....................................................................................................................................................................................................................................................................................... 16 0 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................TAAACAAAAAGTTGAAGCATCTTAAAAGG............................................................................................................................................................................................................................................................ 29 0 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................................................................................CTTCGAAAAGGCTTAGCCTCTTGGTA......................................................................... 26 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................CTTAATTTCCATATAGGTAGGGTGTG.............................................................................................................................................................................................................................................................................................................................. 26 2 11 0.18 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TGATTTTTAGGACATATTCATTTACAA............................................................................................................................................................................................................................... 27 2 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................AAAAGTTAAAGCATCTTAAAAGGACTGAT...................................................................................................................................................................................................................................................... 29 2 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TCTTAAAAGGTCTGATTTTT.................................................................................................................................................................................................................................................. 20 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ATCTTAAAAGGTCTGATTTTTAGGA.............................................................................................................................................................................................................................................. 25 0 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................AGTTAAAGCATCTTAAAAGGACTGAT...................................................................................................................................................................................................................................................... 26 2 6 0.17 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................AAGTTGAAGCATCTTAAAAGGTCGGA....................................................................................................................................................................................................................................................... 26 1 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................ATCTTAGCAACTGCAAC...................................................................................................................................................................... 17 0 6 0.17 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................CAAAAAGTTGGAGCATCTTAAAAGGTC.......................................................................................................................................................................................................................................................... 27 1 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................CTTCGAAAAGGCTTAGCCTCTTGG........................................................................... 24 0 12 0.17 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TTAAAAGGTCTGATTTTTAGGG.............................................................................................................................................................................................................................................. 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TTAAAAGGTCTGATTTTTAGG............................................................................................................................................................................................................................................... 21 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................AAGCATCTTAAAAGGTCT......................................................................................................................................................................................................................................................... 18 0 6 0.17 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................TTAGGACATATTCATTTA.................................................................................................................................................................................................................................. 18 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TCTTAAAAGGTCGGATTTTTAGGACATA.......................................................................................................................................................................................................................................... 28 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................ATCTTAAAAGGTCTGATTTTTAGGAC............................................................................................................................................................................................................................................. 26 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ATCTTAAAAGGTCGGATTTTT.................................................................................................................................................................................................................................................. 21 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................................................................................................................TTAGGACATATTCATTTACT................................................................................................................................................................................................................................ 20 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................CATCTTAAAAGGTCTGAT...................................................................................................................................................................................................................................................... 18 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................GGTATATCTTAGCAACTGCA........................................................................................................................................................................ 20 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................GTTGAAGCATCTTAAAAGGTCTGATT..................................................................................................................................................................................................................................................... 26 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GATTTTTAGGACATATTCATT.................................................................................................................................................................................................................................... 21 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................TTCCATATAGGTAGGGTG................................................................................................................................................................................................................................................................................................................................ 18 1 12 0.17 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0
....................................................................................................................................................................................................................................................................................................TAGCCTCTCGGTAAAATAAGCTTAAAA........................................................... 27 2 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................AAAGTTGAAGCATCTTAAAAGGTCGGA....................................................................................................................................................................................................................................................... 27 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................................GTTGAAGCATCTTAAAAGGTCTGA....................................................................................................................................................................................................................................................... 24 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TGATTTTTAGGACATATTCATTTAC................................................................................................................................................................................................................................. 25 0 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................GAAGCATCTTAAAAGGTCGGA....................................................................................................................................................................................................................................................... 21 1 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................ACTTAATAGGTAGGCATTGAACA............................................................................................................................................................................................................ 23 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................AAGTTGAAGCATCTTAAAAGGTCTGA....................................................................................................................................................................................................................................................... 26 0 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................ATATCTTAGCAACTGCAAC...................................................................................................................................................................... 19 0 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AATAGGTAGGCATTGAACAC........................................................................................................................................................................................................... 20 1 13 0.15 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................ACTTAAGAGGTAGGCATTGAAC............................................................................................................................................................................................................. 22 1 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GGTCTGATTTTTAGGA.............................................................................................................................................................................................................................................. 16 0 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................................GGTCTGATTTTTAGGACATAT......................................................................................................................................................................................................................................... 21 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TTAATAGGTAGGCATTGAACAG........................................................................................................................................................................................................... 22 1 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................CACATAATAAACAAAAAG.............................................................................................................................................................................................................................................................................. 18 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................GTTGAAGCATCTTAAAAG............................................................................................................................................................................................................................................................. 18 0 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................CTGATTTTTAGGACATATT........................................................................................................................................................................................................................................ 19 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GGTCTGATTTTTAGGACA............................................................................................................................................................................................................................................ 18 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TACTTAATAGGTAGGCATTGAACAC........................................................................................................................................................................................................... 25 1 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................AGTTAATAGGTAGGCATTGAAC............................................................................................................................................................................................................. 22 1 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACAAAAAGTTGAAGCATCTT.................................................................................................................................................................................................................................................................. 22 0 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................AAGGTCTGATTTTTAGG............................................................................................................................................................................................................................................... 17 0 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................AAAGGTCTGATTTTTAGGACA............................................................................................................................................................................................................................................ 21 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TAAAAGGTCTGATTTTTAGGA.............................................................................................................................................................................................................................................. 21 0 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................ATAGGTAGGCATTGAACAC........................................................................................................................................................................................................... 19 1 14 0.14 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................TAGGACATATTCATTTAC................................................................................................................................................................................................................................. 18 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AAACAAAAAGTTGAAGCAT..................................................................................................................................................................................................................................................................... 19 0 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TAAAAGGTCTGATTTTTAGGAA............................................................................................................................................................................................................................................. 22 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................................................................................................................AAAGGCTTAGCCTCTTGGTAAAATAAAC................................................................. 28 0 15 0.13 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................TGATTATACTTTGAAAAGGCGTAGCC................................................................................. 26 3 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................CTTAATAGGTAGGCATTG................................................................................................................................................................................................................ 18 0 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................ACTTAATAGGTAGGCATTGA............................................................................................................................................................................................................... 20 0 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................ATCCCTATAGGCAGGGTGTG........................................ 20 1 8 0.13 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................AAAGGTCTGATTTTTAGGG.............................................................................................................................................................................................................................................. 19 1 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................TTAATAGGTAGGCATTGAAAAAA.......................................................................................................................................................................................................... 23 2 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TTACTTAATAGGTAGGAAT.................................................................................................................................................................................................................. 19 1 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................ATTTACTTAATAGGTAGGCATTGA............................................................................................................................................................................................................... 24 0 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................AAGGTCTGATTCTTAGGAC............................................................................................................................................................................................................................................. 19 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TTTATAGGTAGGCATTGAAC............................................................................................................................................................................................................. 20 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................ACTTAATAGGTAGGCATTG................................................................................................................................................................................................................ 19 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................AAAGGCTTAGCCTCTTGGTAAAATA.................................................................... 25 0 18 0.11 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................AGGACTGATTTATAGGACA............................................................................................................................................................................................................................................ 19 2 9 0.11 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................AAAAAGTTGAAGCATCTT.................................................................................................................................................................................................................................................................. 18 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TAATAGGTGGGCATTGAAC............................................................................................................................................................................................................. 19 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................AAGCATCTTAAAAGGT........................................................................................................................................................................................................................................................... 16 0 10 0.10 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................................................................................................GCTTAGCCTCTTGGTAAAATA.................................................................... 21 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................CTTTGAAAAGGCTTAGCCTCTTGGTAAA....................................................................... 28 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................CTTCGAAAAGGCTTGGCCTCTTGGTA......................................................................... 26 1 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................TTCCATATAGGTAGGGTGT............................................................................................................................................................................................................................................................................................................................... 19 1 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TTTCCATATAGGTAGGGTGTGT............................................................................................................................................................................................................................................................................................................................. 22 2 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AATAGGTAGGCATTGAACG............................................................................................................................................................................................................ 19 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................TTCGAAAAGGCTTAGCCTCG.............................................................................. 20 1 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AATATGTAGGCATTGAAC............................................................................................................................................................................................................. 18 1 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................GGTAGGCATTGAAAAA........................................................................................................................................................................................................... 16 1 12 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................TGGAAAAGGTTTAGCCTCTTGGTAA........................................................................ 25 2 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................CGAAAAGGCTTAGCCTCTTGGTAAAAT..................................................................... 27 0 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................CGAAAAGGCTTAGCCTCTTGGTAAAAGA.................................................................... 28 1 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................CTTCGAAAAGGCTTAGCCTCTTG............................................................................ 23 0 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................CTTCGAAAAGGCTTAGCCTCT.............................................................................. 21 0 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................TTTGAAAAGGCTTAGCCTCTTG............................................................................ 22 1 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ATCTTAAAACGTCTGATTC.................................................................................................................................................................................................................................................... 19 2 12 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................TGGAAAAGGCTTAGCCTCTTGGTAAAA...................................................................... 27 1 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................CTTCGAAAAGGCTTAGCCTC............................................................................... 20 0 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................CGAAAAGGCTTAGCCTCTTGG........................................................................... 21 0 13 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................TTAAAGTATCTTAAAAGGACT......................................................................................................................................................................................................................................................... 21 3 13 0.08 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................................................................................................CGAAATGGCTTAGCCTCTTGGTAAAAT..................................................................... 27 1 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................................................................................................TTGAAAAGGCTTAGCCTCTT............................................................................. 20 1 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................TTGAAAAGGCTTAGCCTCT.............................................................................. 19 1 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................GGTGAAGCATATTAAAAG............................................................................................................................................................................................................................................................. 18 2 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TAGGTAGGCATTGAACAC........................................................................................................................................................................................................... 18 1 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................GGCTTAGCCTCTTGGTAAAATAAACT................................................................ 26 0 15 0.07 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AATAGGGAGGCATTGAAC............................................................................................................................................................................................................. 18 1 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AATAGGCAGGCATTGAACA............................................................................................................................................................................................................ 19 1 15 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................................................................................................................................................AGGCTTAGCCTCTTGGTAAAATAAACTTA.............................................................. 29 0 15 0.07 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AATAGGTAGGCAGTGAAG............................................................................................................................................................................................................. 18 2 16 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TAGGTAGGCATTGAAAAAA.......................................................................................................................................................................................................... 19 2 18 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................AGGCTTAGCCTCTTGGTAAA....................................................................... 20 0 18 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................TTAGCCTCTTGGTAAAATAAAC................................................................. 22 0 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................AGGCTTAGCCTCTTGGTAAAA...................................................................... 21 0 18 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................GTGGGCATTGAACAA........................................................................................................................................................................................................... 15 1 18 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................................................................................................................AAGGCTTAGCCTCTTGGTAAAATAA................................................................... 25 0 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................GGCTTAGCCTCTTGGTAAA....................................................................... 19 0 19 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................GGCTTAGCCTCTTGGTAAAAT..................................................................... 21 0 19 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................TTCCAGATAGGTAGGGTGG............................................................................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GGCATCTTTTCCGAACCGGAGAACCATTTTCTTTGAATTTTAGGTATATCCATCCCACACAATATTTTGATAGGGTTAAGTTTTAGCGCAGTGTATTATTTGTTTTTCAACTTCGTAGAATTTTCCAGACTAAAAATCCTGTATAAGTAAATGAATTATCCATCCGTAACTTGTTAACCATAAAAATACACCATATAGAATCGTTGACGTTGTACTGGGTGTTAATATATTTGACAATTTATTACCCATACTAAATAGAGCTGATGGGGTTACTAATAAGAAGCTTTTCCGAATCGGAGAACCATTTTATTTGAATTTTAGGGATATCCATCCCACACTATATTTTGATAGGGTTAAGTTTTAGCGCAGTGTATTATT
*************************************************************************************************************************************************************************************************************...(((((....(((((.............)))))....))))).......************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 M024
male body		 SRR618934
dsim w501 ovaries
.........................................................................................................................................................................................................................................................ACTAAATAGAGCTGATGGGGTTACTAAT..................................................................................................... 28 0 2 0.50 1 0 0 0 1 0 0 0
.........................................................................................................................................................................................................................................................................GGGGTTACTAATAAGAAGCTTTTCCGGAT.................................................................................... 29 1 4 0.50 2 0 2 0 0 0 0 0
................................................................................................................................................................................................................................................................AGAGCTGATGGGGTTACTCATAAGAT................................................................................................ 26 2 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................AGTGTATTATTCGTATTTCAACTTCGT...................................................................................................................................................................................................................................................................... 27 2 9 0.33 3 3 0 0 0 0 0 0
.........................................................................................AGTGTATTATTTGTTTTTCAA............................................................................................................................................................................................................................................................................ 21 0 6 0.33 2 2 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................ATATTTTGATAGGGTTAAGTTTT................ 23 0 4 0.25 1 0 1 0 0 0 0 0
..........................................................................GTTAAGTTTTAGCGCAGTGTATTAT....................................................................................................................................................................................................................................................................................... 25 0 4 0.25 1 0 0 1 0 0 0 0
......................................................................................................................................................................TAACTTGTTAGCCATAAAAAT............................................................................................................................................................................................... 21 1 4 0.25 1 0 0 1 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................TAGGGTTAAGTTTTAGCGCAG......... 21 0 4 0.25 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................GTTAAGTTTTAGCGCAGTGTATTAT. 25 0 4 0.25 1 0 0 1 0 0 0 0
..........................................................................GTTAAGTTTTAGCGCAGTGTAT.......................................................................................................................................................................................................................................................................................... 22 0 4 0.25 1 0 0 1 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................GTTAAGTTTTAGCGCAGTGTAT.... 22 0 4 0.25 1 0 0 1 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................AGGGTTAAGTTTTAGCGCAGT........ 21 0 4 0.25 1 1 0 0 0 0 0 0
......................................................................TAGGGTTAAGTTTTAGCGCAG............................................................................................................................................................................................................................................................................................... 21 0 4 0.25 1 1 0 0 0 0 0 0
.......................................................................AGGGTTAAGTTTTAGCGCAGT.............................................................................................................................................................................................................................................................................................. 21 0 4 0.25 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................TTACTAATAAGATGCTTTTCCGGAT.................................................................................... 25 2 4 0.25 1 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................................................................GGGGTTACTAATAAGATGCTTTTCCGGAT.................................................................................... 29 2 4 0.25 1 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................AGGGTTAAGTTTTAGCGCAGTGTAT.... 25 0 4 0.25 1 0 0 1 0 0 0 0
.............................................................ATATTTTGATAGGGTTAAGTTTT...................................................................................................................................................................................................................................................................................................... 23 0 4 0.25 1 0 1 0 0 0 0 0
.......................................................................AGGGTTAAGTTTTAGCGCAGTGTAT.......................................................................................................................................................................................................................................................................................... 25 0 4 0.25 1 0 0 1 0 0 0 0
............................................................................................................................................................................................................TGACGTTGTACTGGGTGTTAATAT...................................................................................................................................................... 24 0 5 0.20 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................TTAGAGCTGATGGGGTTACTA....................................................................................................... 21 1 5 0.20 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................AGGGATATCCATCACACACTA...................................... 21 1 5 0.20 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................................................................AGAGCTGATGGGGTTACTAAT..................................................................................................... 21 0 5 0.20 1 0 1 0 0 0 0 0
.........................................................................................AGTGTATTATTTGTTTTTCAACCT......................................................................................................................................................................................................................................................................... 24 1 5 0.20 1 1 0 0 0 0 0 0
....................................................................................................................AGAATTTTCCAGCCTAAAAATT................................................................................................................................................................................................................................................ 22 2 6 0.17 1 0 0 0 1 0 0 0
....................................................................................................................AGAATTTTCCAGACTAAAAATCCTGT............................................................................................................................................................................................................................................ 26 0 6 0.17 1 1 0 0 0 0 0 0
....................................................................................................................AGAATTTTCCAGACTTAAAATCCTGTAT.......................................................................................................................................................................................................................................... 28 1 6 0.17 1 0 1 0 0 0 0 0
....................................................................................................................AGAATTTTCCAGACTAAAAATC................................................................................................................................................................................................................................................ 22 0 6 0.17 1 0 1 0 0 0 0 0
................................................................................................................TCGTAGAATTTTCCAGACTAAA.................................................................................................................................................................................................................................................... 22 0 6 0.17 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................TTATTTGAATTTTAGGGATAT................................................... 21 0 6 0.17 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................TAGTGCCGATGGGGTTA.......................................................................................................... 17 2 8 0.13 1 0 0 0 0 0 0 1
.....................................................................................................................................................................................................................................TTTGACAATTATGTACCCAT................................................................................................................................. 20 3 8 0.13 1 0 0 0 0 1 0 0
.............................................................................................................................................................................................................................................................................................................................................................AGGGTTAAGTTTTAGAGCAGTGTAT.... 25 1 9 0.11 1 0 1 0 0 0 0 0
.......................................................................AGGGTTAAGTTTTAGAGCAGTGTAT.......................................................................................................................................................................................................................................................................................... 25 1 9 0.11 1 0 1 0 0 0 0 0
....................................................................................................................AGAAGTTTCCAGAGTAAA.................................................................................................................................................................................................................................................... 18 2 11 0.09 1 0 0 0 0 0 1 0
.......................................................................................................................................................................................................................................................................................................AGAGAACCATTTTATTTGAATT............................................................. 22 1 17 0.06 1 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................CGGAGAACCATTTTATTTGAA............................................................... 21 0 18 0.06 1 0 0 0 0 1 0 0
.......................................................................................................................................................................................................................................................................................................GGAGAACCATTTTATTTGAAT.............................................................. 21 0 19 0.05 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................CCAGACTAGATTATGATA............................ 18 3 20 0.05 1 0 0 0 0 0 1 0

Generated: 04/23/2015 at 10:28 PM