ID:

dsi_995

 Coordinate:

3r:6512035-6512184 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.4 -12.4 -12.4

Flybase annnotation

five_prime_UTR [3r_6511945_6512034_-]; exon [3r_6511945_6512034_-]; intron [3r_6512035_6515460_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AATGGGCGTGCTTCTATAAGCACCTTATCTGACATTTTTGAAAGGTTCTCCTATCAAACAAGGAACTACTTATTTGATTGGGTATAAAACAAACTTATCTTGAATTGTAACTGAAGAGTACTTAGGGAAATATGAATCGCCTTATCATAATGCTTGTGGGGCCTATAAGTAATTTGCGTTCTCCACTTCTTTGCTTACAGCTTAAGGGGAACTTGTGTCGACGACTCTTTTAGAGCTTGTTTAGAGGGAC
********************************************************.........(((..(((((..((((.(((((..(((.......)))..))))).)))).)))))..))).............((((((.((.......))))))))**************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 M053
female body
 M023
head
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
................................................................................................................................................................................................................GAACTTGTGTCGACGACT........................ 18 0 1 42.00 42 24 18 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GAACTTGTGTCGACGACC........................ 18 1 1 4.00 4 1 3 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GGAACTTGTGTCGACGACT........................ 19 0 1 4.00 4 1 3 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CTTTTAGAGCTTGTTTAGAGG... 21 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CTTTTAGAGCTTGTTTAGAGGG.. 22 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TGTGTCGACGACTCTTTTAGAGCT............. 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GTGTCGACGACTCTTTTAGAGCTTG........... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................AACTTGTGTCGACGACTCT...................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................ACTTGTGTCGACGACTCT...................... 18 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................CTTAAGGGGAACTTGTGTCGACGACT........................ 26 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TTAAGGGGAACTTGTGTCGACGACT........................ 25 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GGAACTTGTGTCGACGACC........................ 19 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GTCGACGACTCTTTTAGAGCT............. 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GTCGACGACTCTTTTAGAGCTTGT.......... 24 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................TCATAATGCTTGTGGGGC........................................................................................ 18 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TTTTAGAGCTTGTTTAGAGGGA. 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TTAGAGCTTGTTTAGAGG... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GAACTTGTGTCGACGACG........................ 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AGGGGAACTTGTGTCGAC............................ 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................GGCTTAAGGGGAACTTTTGTCGACGAC......................... 27 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CTTGTGTCGACGACTCTTTTAGAGCT............. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AAGGGGAACTTGTGTCGACGACTC....................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................AACAAGGAACTACTTATTTGATTGGGT....................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TGTGTCGACGACTCTTTTAGAGCC............. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TTAGAGCTTGTTTAGAGGG.. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CTTTTAGAGCTTGTTTAGA..... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AGGGGAACTTGTGTCGACGACT........................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TAAGGGGAACTTGTGTCGACGACT........................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTGTGTCGACGACTCTTTTAGAGCTTGT.......... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................TAAGGGGAACTTGTGTCGACGAC......................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................GAGTACTTAGGGAAATATGAATCGCCTT........................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TTAAGGGGAACTTGTGTC............................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TGTGTCGACGACTCTTTTAGAGCTTGT.......... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................GACTCTTTTAGAGCTTGTTTAGAGG... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GACGACTCTTTTAGAGCT............. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................................................GGCTTAAGGGGAACTTGTGTCGAC............................ 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CTCTTTTAGAGCTTGTTTAGAGGG.. 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TTAAGGGGAACTTGTGTCGACGACTC....................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TCTTTTAGAGCTTGTTTAGAGGG.. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GAACTTGTGTCGACGGCT........................ 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................GGGGAACTTGTGTCGACGACT........................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
........................................................................................................................................................................................................................GTCGACGACTCTTTTAGAGCTTGC.......... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................CTTAAGGGGAACTTGTGTCGACGAC......................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................ACTTGTGTCGACGACTCTTTTAGAGCTT............ 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................TCATAATGCTTGTGGGGT........................................................................................ 18 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GATCTTAAGGGGAACTTGTGTCGACGACT........................ 29 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
......................................................................TATTTGATTGGGTATAAAA................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................CATAATGCTTGTGGGGCCT...................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................ACTTGTGTCGACGACTCTTTTAGAGCG............. 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................AGGTTCTCCTATCAAACAAG............................................................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TCTTAAGGGGAACTTGTGTCGAC............................ 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................ATCTTAAGGGGAACTTGTGTC............................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................ACTTGTGTCGACGACTCC...................... 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................GGTATAAAACAAACTTATCTTGAATTGT.............................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................GGAACTACTTATTTGATTGGGTAT..................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TCTTGAATTGTAACTGAAGAG.................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................ATCTTAAGGGGAACTTGTGTCGACGACT........................ 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GATCTTAAGGGGAACTTGTGTCGAC............................ 25 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTGTGTCGACGACTCTTTTAGAGCT............. 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................GCTTACAGCTTAAGGGGAA....................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................CTTAAGGGGAACTTGTGTCGACGACG........................ 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................CTTGAATTGTAACTGAAGAG.................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................AATCTTAAGGGGAACTTGTGTCGACGACT........................ 29 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AAGGGGAACTTGTCTC............................... 16 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................TTGGTTACAGCTTAAGTGGTACT..................................... 23 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................ATTGTAACTGAAGAGA................................................................................................................................... 16 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................................................................................TTGATCTTAAGGGGAACTTGT.................................. 21 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GAAACTGTGTCGACGACT........................ 18 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
..........................ACCTGAAATTTTTGAAAGG............................................................................................................................................................................................................. 19 2 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................TAACTGAGGAGTACGAAGG............................................................................................................................ 19 3 18 0.06 1 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................TATTGTAACTGAAGAGA................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

TTACCCGCACGAAGATATTCGTGGAATAGACTGTAAAAACTTTCCAAGAGGATAGTTTGTTCCTTGATGAATAAACTAACCCATATTTTGTTTGAATAGAACTTAACATTGACTTCTCATGAATCCCTTTATACTTAGCGGAATAGTATTACGAACACCCCGGATATTCATTAAACGCAAGAGGTGAAGAAACGAATGTCGAATTCCCCTTGAACACAGCTGCTGAGAAAATCTCGAACAAATCTCCCTG
****************************************************************************************.........(((..(((((..((((.(((((..(((.......)))..))))).)))).)))))..))).............((((((.((.......))))))))******************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
....................................AAATTTTCTCAGAGGATAGTT................................................................................................................................................................................................. 21 3 3 0.33 1 0 1 0 0 0 0
..........................................................................................................CAGCGACTCCTCATGAATCC............................................................................................................................ 20 3 4 0.25 1 0 0 1 0 0 0
............AGCTATTAGCGGAATAGACT.......................................................................................................................................................................................................................... 20 3 5 0.20 1 1 0 0 0 0 0
...........................................................................................................AGCGACTCCTCATGAATCC............................................................................................................................ 19 3 6 0.17 1 1 0 0 0 0 0
............................................................................................................................CCCTTTATAGTTAACGAAATA......................................................................................................... 21 3 13 0.08 1 0 0 0 1 0 0
................................................................................................................................TTATACTTAGCGAAA........................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 1
..................................................................................................................................................................................................................GGAACACAGCTCCTGA........................ 16 2 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................................AGAGGTGAACACACGAA...................................................... 17 2 20 0.05 1 0 1 0 0 0 0
.............................................................................................................................................AGTAGTGTTACGAACA............................................................................................. 16 2 20 0.05 1 0 0 0 0 1 0
.................................................................................................................................................................................................................................AGGAAATCTCGAAGAAA........ 17 2 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:6511985-6512234 - dsi_995 AAT----GGGCGTGCTT-------C-TATAAGCAC---------------CTTATCTG--ACATTTTTGAAA---GG--------------------------------------------------TTCTCCTATCAAACAAGGAACTACTTA-------------TTTGATTGGGTATAAAACAA--------ACTTATCTTGAA-T----TGTAACTGAAGAGTACTTAGGGAAATAT---------------------GAATCG-CCTTATCATAA-----------------------------------------------T-GCTTGTG---GGGCCTATAAGTAATTTG-CGTTCTCC-----ACTTCTTTGCTTACAGCTTAAGGGGAACTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGGGAC
droSec2 scaffold_5:5151677-5151925 - TG------GGCGTGCTT-------C-TATAAGCAC---------------CTTATCTG--ACACTTTTGAAA---GG--------------------------------------------------TACTCCTATCAAACAAGGAACTACTTA-------------TTTGATTGGCTAAAAAACAA--------ACTTATCTTGAC-T----TGTAACTGAAGCGTACTTAGGGAAATAT---------------------GAATCGCCCTTATCATAA-----------------------------------------------T-GCTTGTG---GGGCCTATAAGTAATTTG-CGTTCTCC-----ACTTCTTTGCTTACAGCTTAAGGGGAACTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGGGAC
dm3 chr3R:14744967-14745194 + AAT----GGGCGTGCTT-------C-TATAAGCAC---------------CTTATCTG--ATATTTTTGAAA---GG--------------------------------------------------TACTCCTATCAAACAAGGAACTACTTA-------------TTTGGTTGGGTAAAAAACAA--------ACTTATCTTGAA-T----TGTAACTGAAGTGTAG-------------------------------------------TATCATAA-----------------------------------------------T-GCTTGTG---GGGCCTATAAGTAAT-TG-CGTTTTTC-----ATTTCTTTGCTTACAGTTTAAGGGGAACTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGGGAC
droEre2 scaffold_4770:6886174-6886414 - TG------GGCGTGCGT-------C-TATAAGAGC---------------C----CTG--ACAT--TTGAAA---GG--------------------------------------------------TACTCTTATCAAACAAGGAACTACTTA-------------TTTGGTTGG--AAAAAACAA--------ACTTATCTTGAA-C----TGTAACTGAAGAGTACTTAGGGAAAAAT---------------------GAATCCCGTCTATCAAAA-----------------------------------------------T-GCTTGTG---GGGCCTATAAGTAATTTG-CGTTCTCC-----ATTTCTTTGCTTACAGCTTAAGGGGAACTTGTGTCGACGACTCTT-TAAGAGCTTGTTTAGAGGGAC
droYak3 3R:3414876-3415124 + TG------GGCGTGCTA-------T-TATAAGGCTCTTATAGACAGACGCCTTATCTG--ACATTTAAAAAA---GG--------------------------------------------------TGCTCCTATCAAACAAGGAACTACTTA-------------TTTGGTTGG--GAAAAACAG--------ACTTATCTTGAT-T----TGTAACGGGA-------------ATAAC---------------------GAATCCCTCCTATCAAAA-----------------------------------------------T-GCTTGTG---GGGCCTATAAGTAATTTG-CGTTCTCC-----ATTTCTTTGCTTACAGCTTAAGGGGAACTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGGGAC
droEug1 scf7180000409804:980999-981252 + TG------AGCATGTTAG------C-TATAAGAAT---------------CTTATCTG--ACAT--TTGAAAGGAGG--------------------------------------------------TAGCATTATCGAATGAGGAACTATTTA-------------GTGGAAT-----CAAAACAA--------AATTATCTTTAA-T----TTTAACTGAAGAGTACTTAGGAAA----ACCATA------------------TCATTCTTATCAAAA---------------------TGAT-----------------CAACGT-ACTTTTG---GGGCCTATAAGTAATGTG-CGTTCTCC-----ATTTATTTGCTTACAGCTTAAGGGGAACTTGTGCCGACGACTCTT-TTAGAGCTTGTTTAAAGGGAC
droBia1 scf7180000302402:488850-489098 + TA------GGCGTGTTTG------C-CATACGAAT---------------CTTATCTG--GCGC--TTGA-A---GG--------------------------------------------------TAGCCCTATCGAACGAGGAACTGTTGG-------------GCT--TTGG--GAAAAACAA--------AATTATCTTTAA-T----TGTATCTGAAGAGCACTTTGAAAA----ATCCTC------------------CTG-TCTTATCATAG---------------------TGAT-----------------CAACT--GCTTCTG---GGGCCTATAAGTAATGTG-CGTTCTCC-----ATTTCTTTGCTTACAGCTTAAGGGGAACTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGGGAC
droTak1 scf7180000415256:231262-231519 + --------GGCGTGTGG-------C-TATAAGAAT---------------CTTATCTG--ACAT--TTGAAA---GG--------------------------------------------------TGGCCCTATCGAATGAGGAACTATTTGAACCATTTTGA-----GGTT-G--AAAAAACAA--------AATTATCTTTAA-T----TGTAACTGAAGAGTACTTAGGAAA----ATCCCC------------------CTGACCTTATCATAA---------------------TGAT-----------------CACCGT-TCTTCTG---GGGCCTATAAGTAATGTG-CGTTCTCC-----ATTTCTTTGCTTACAGCTTAAGGGGAACTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGGGAC
droEle1 scf7180000490994:491861-492110 + TA------TGCGTGTAGG------CGTAAGTGAAT---------------TTTATCTATAAGAA--TTGAAA---GA--------------------------------------------------CAGACCTATCAAATGAGGAACCATTT-----------------GGTT----GAAAAACAA--------AATTATCTTTAA-T----TGTCACTGAAGATTATTAAGGAAA----ATCCAT------------------TCGCCCTTATCAAAC---------------------TAAT-----------------CATCGT-G-TTGTG---GGGCCTATAAGTAATGTG-CGTTCTTC-----ATTTCTTTGCTTACAGCTTAAGGGGAACTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGGGAC
droRho1 scf7180000779900:387296-387542 + GA-------GTGTGGTT-------C-CAAGAGAAT---------------CTTATCTATAAGAT--TTGAAA---GG--------------------------------------------------AAGCCCTATCGAATGAGGAAACATTT-----------------GGTT----GAAAAACAA--------AATTATCTTTAA-T----TGTAACTGAAAAGTAATTAGGAAA----ATCCAC------------------TCGCCCTTATCAAAT---------------------TGAT-----------------CACCTT-G-TTTTG---GGGCCTATAAGTAATGTG-CGTTCTTC-----ATTTCTTTGCTTACAGCTTAAGGGGAACTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGGGAC
droFic1 scf7180000453812:300153-300406 - TA------GGCGTGTGTTTGGGGGC--CCAAGAAT---------------CTTATCTG--ACAT--TTGAAA---GG--------------------------------------------------CGCCCCTATCGAATCAGGAACCGTTTG----------A-----GGTT----CAAAAACAA--------AATTATCTTTAA-T----TGTAACTGAAGAGTACTTAGCGAA----ATCCCA------------------TCGCCCTTATCATAA---------------------TGAT-----------------CACCGT-A-CTGTG---GGGCCTATAAGTAATGCG-CCTTCTCC-----ATTTCTTTGCTTACAGCTTAAGGGGAACTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGGGAC
droKik1 scf7180000302256:260728-261015 - G--------GCGTGTGG-------C-CGAGAGATT---------------CTTATCTG-----------AAA---GTCGACT------------------------------------------------ACGTATCGAATGAGGAACCATTTG----------CTGTTTAGGGCG--GAAAAATAC----ACCAAATTATCTTTAA-T----TGTAACTGAAGAGTACTTAGGAAA----ATCCTATCTAT--GTACCCGGGC----CCCTTATCATCGTCAAAACAATAGATATATCAACGAT-----------------CACCTTACCTGTTG---GGGCCTATAAGTAATGTG-CGTTCTCC-----GTTTCTTTGCTTACAGCTTAAGGGGAACTTGTGTCGACGACTCTTTTTAGAGCTTGTTTAGAGGGAC
droAna3 scaffold_12911:3108554-3108782 + AACTATTTG----------------------------------------------CCG--ACGCCTTTGA------G--------------------------------------------------TTCTCTTATCAAATAGGGAAGCAACTT-------------TTTGGGTGG--CAAAAATATCATAAT-AAAATATCTCTAA-T----TGTAACTGAAGAGCACTTAT-----------------------------AAAT----CTTATT-TTA---------------------CGAT-----------------AAACCA-G-CTGTG---GGGCCTATAAGTAATGCG-CCTTCTCC-----ACTTCTTTGCTTACAGCTTAAAGGGAACTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGGGAC
droBip1 scf7180000396019:18580-18811 - ATT----TGGCGAAGCC-------T-TTCGGGGCT---------------CTTATCAA--AC------------------------------------------------------------------AGCCCTATCGAATAGGGAAGCAACTT-------------TTTGGGTAGC-GAAAAATAG--------CATTATCTCTAA-T----TGTAACTGAAGAGCACTTAT-----------------------------AAATCATTTT-----TTA---------------------CGAT-----------------AAACCA-G-CTGTG---GGGCCTATAAGTAATGCG-CCTTCTCC-----AATTCTTTGCTTACAGCTTAAAGGGAACTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGGGAC
dp5 2:14868402-14868674 + TG------GGGG------------C-CGTGGG------------------CTTATCAG--ACGT--TTGAAA---GGCGCCCAGCC-----------------------------------------CAGCCCTATCGAACAAGGAACTATA-A---------------TGTTTGG--CGAAAACAACTCTAC--TACTATCTGTAA-T----TACAATTGAAGAGGACTTAA---A----ATCAAATCTAGAGCTATTCTCGAA----TCTTATCACTG---------------------CGAT-----------------CTCCAT-G-TTGTG---CGCCCAATAAGTAATGCG-CCTTCTCTTCTTTATTCTTTAATTTACAGCCTAAGGGGAACTTGTGTCGACGACTCTTTTTAGAGCTTGTTTAGAGGGAT
droPer2 scaffold_0:5543206-5543480 - GG------GGGGCG----------C-CGTGGG------------------CTTATCAG--ACGT--TTGAAA---GGCGCCCAGCC-----------------------------------------CAGCCCTATCGAACAAGGAACTATA-A-------------TTT--TTGG--CGAAAACAACTCTAC--TATTATCTGTAA-T----TACAATTGAAGAGGACTAAA---A----ATCAAATCTAGAGCTATTATCGAA----TCTTATCACTG---------------------CGAT-----------------CTCCAT-G-TTGTG---GGCCCTATAAGTAATGCG-CCTTCTCTTCTTTATTCTTTAATTTACAGCCTAAGGGGAACTTGTGTCGACGACTCTTTTTAGAGCTTGTTTAGAGGGAT
droWil2 scf2_1100000004921:3001671-3001967 + TA------TT---GCTT-------T-TA---GGGG---------------CTTATCTC--GGCC--ATAT-A---CA---------TACATATACATATATATACTCTAAACACTCTTCTATCTGTTTGCGTTTATCGAATGAGGAACTAATTT-------------GGT--TTGT---CTATAGTT--------TGTTATCTTTGAATTTTTTGT-ACTTAAGGGTGTT-------------------------------------------------A------CAATTGATATGTTATCGTTAGGAGATTTCTTATTTACTCCTCACCCATTAAATAAACATACAAATAATGA--TGATCTTT-----CTATATTTCATTTCAGTCTAAAGGGAACTTGCGTCGACCACTCTTTTTAGAGCTTGTTTGGTGGTAC
droVir3 scaffold_12822:3310851-3310957 + TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTAAG-----------------------------------------------T-ACTTATG---GAATCCATAAATAATATA-AACTATTC-----T-CTTTTCGTTTTCAGTCTAAAAGGAAGTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGTTTC
droMoj3 scaffold_1563:671-733 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTCCTTTCAGTCTAAAAGGAAGTTGTGTTGACGACTCTT-TTAGAGCTTGTTTAGAGCTTC
droGri2 scaffold_14906:954470-954557 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTAAGTAATGTGAAGTTGTTT-----TCTGTTTTCTTTGCAGTCTAAAAGGAAGTTGTGTCGACGACTCTT-TTAGAACTTGTTTAAAG-TTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAT----GGGCGTGCTT-------C-TATAAGCAC---------------CTTATCTG--ACATTTTTGAAA---GG--------------------------------------------------TTCTCCTATCAAACAAGGAACTACTTA-------------TTTGATTGGGTATAAAACAA--------ACTTATCTTGAA-T----TGTAACTGAAGAGTACTTAGGGAAATAT---------------------GAATCG-CCTTATCATAA-----------------------------------------------T-GCTTGTG---GGGCCTATAAGTAATTTG-CGTTCTCC-----ACTTCTTTGCTTACAGCTTAAGGGGAACTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGGGACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGTGTCGACGACT.........................18142.00420182400000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGTGTCGACGACC.........................1814.00403100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTGTGTCGACGACT.........................1914.00403100000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTT-TTAGAGCTTGTTTAGAGG...2113.00300030000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTT-TTAGAGCTTGTTTAGAGGG..2212.00200020000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCGACGACTCTT-TTAGAGCT.............2412.00200200000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCGACGACTCTT-TTAGAGCTTG...........2512.00200200000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AACTTGTGTCGACGACTCT.......................1912.00200200000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................ACTTGTGTCGACGACTCT.......................1812.00211000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CTTAAGGGGAACTTGTGTCGACGACT.........................2612.00200110000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGGGAACTTGTGTCGACGACT.........................2512.00200020000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTGTGTCGACGACC.........................1912.00202000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGACTCTT-TTAGAGCT.............2112.00202000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGACTCTT-TTAGAGCTTGT..........2412.00210100000000000000
..................................................................................................................................................................................................................................................................................TCATAA-----------------------------------------------T-GCTTGTG---GGGC...............................................................................................1812.00220000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TT-TTAGAGCTTGTTTAGAGGGA.2211.00100000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAGCTTGTTTAGAGG...1811.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGTGTCGACGACG.........................1811.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGGGGAACTTGTGTCGAC.............................1811.00100000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................CTTGTGTCGACGACTCTT-TTAGAGCT.............2611.00100100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................AAGGGGAACTTGTGTCGACGACTC........................2411.00101000000000000000
..........................................................................................................................................AACAAGGAACTACTTA-------------TTTGATTGGGT....................................................................................................................................................................................................................................................................2711.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCGACGACTCTT-TTAGAGCC.............2411.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAGCTTGTTTAGAGGG..1911.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTT-TTAGAGCTTGTTTAGA.....1911.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGGGGAACTTGTGTCGACGACT.........................2211.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAAGGGGAACTTGTGTCGACGACT.........................2411.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTGTGTCGACGACTCTT-TTAGAGCTTGT..........2811.00100000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAAGGGGAACTTGTGTCGACGAC..........................2311.00100100000000000000
...............................................................................................................................................................................................................................GAGTACTTAGGGAAATAT---------------------GAATCG-CCTT.....................................................................................................................................................................2811.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGGGAACTTGTGTC................................1811.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCGACGACTCTT-TTAGAGCTTGT..........2711.00100000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GACTCTT-TTAGAGCTTGTTTAGAGG...2511.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GACGACTCTT-TTAGAGCT.............1811.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTCTT-TTAGAGCTTGTTTAGAGGG..2411.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGGGAACTTGTGTCGACGACTC........................2611.00100010000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TCTT-TTAGAGCTTGTTTAGAGGG..2311.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GGGGAACTTGTGTCGACGACT.........................2111.00100000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGACTCTT-TTAGAGCTTGC..........2411.00110000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CTTAAGGGGAACTTGTGTCGACGAC..........................2511.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................ACTTGTGTCGACGACTCTT-TTAGAGCTT............2811.00100010000000000000
..................................................................................................................................................................................................................................................................................TCATAA-----------------------------------------------T-GCTTGTG---GGGT...............................................................................................1811.00110000000000000000
........................................................................................................................................................TA-------------TTTGATTGGGTATAAAA..............................................................................................................................................................................................................................................................1911.00100000000010000000
...................................................................................................................................................................................................................................................................................CATAA-----------------------------------------------T-GCTTGTG---GGGCCT.............................................................................................1911.00100100000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................ACTTGTGTCGACGACTCTT-TTAGAGCG.............2711.00101000000000000000
.......................................................................A---GG--------------------------------------------------TTCTCCTATCAAACAAG......................................................................................................................................................................................................................................................................................................2011.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................ACTTGTGTCGACGACTCC.......................1811.00101000000000000000
...............................................................................................................................................................................GGTATAAAACAA--------ACTTATCTTGAA-T----TGT..............................................................................................................................................................................................................................2811.00100100000000000000
...............................................................................................................................................GGAACTACTTA-------------TTTGATTGGGTAT..................................................................................................................................................................................................................................................................2411.00100010000000000000
........................................................................................................................................................................................................TCTTGAA-T----TGTAACTGAAGAG....................................................................................................................................................................................................................2111.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTGTGTCGACGACTCTT-TTAGAGCT.............2511.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................GCTTACAGCTTAAGGGGAA........................................1911.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CTTAAGGGGAACTTGTGTCGACGACG.........................2611.00101000000000000000
.........................................................................................................................................................................................................CTTGAA-T----TGTAACTGAAGAG....................................................................................................................................................................................................................2011.00100000100000000000
..............................................................................................................................................................................................................A-T----TGTAACTGAAGAGA...................................................................................................................................................................................................................1620.50100000000100000000
droSec2
TG------GGCGTGCTT-------C-TATAAGCAC---------------CTTATCTG--ACACTTTTGAAA---GG--------------------------------------------------TACTCCTATCAAACAAGGAACTACTTA-------------TTTGATTGGCTAAAAAACAA--------ACTTATCTTGAC-T----TGTAACTGAAGCGTACTTAGGGAAATAT---------------------GAATCGCCCTTATCATAA-----------------------------------------------T-GCTTGTG---GGGCCTATAAGTAATTTG-CGTTCTCC-----ACTTCTTTGCTTACAGCTTAAGGGGAACTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGGGACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGGGAACTTGTGTCGACGACT.........................2514.0040220
.....................................................................................................................................................................................................................................................................................................................................................................................................TAAGGGGAACTTGTGTCGACGACT.........................2413.0030300
...................................................................................................................................................................................................................................................................................................................................................................................................CTTAAGGGGAACTTGTGTCGACGACT.........................2613.0031200
...................................................................................................................................................................................................................................................................................................................................................................................................CTTAAGGGGAACTTGTGT.................................1812.0020020
......................................................................................................................................................................................................................................................................................................................................................................................................AAGGGGAACTTGTGTCGACGACT.........................2312.0020200
....................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGGGAACTTGTGTCGAC.............................2112.0020200
...........................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGTGTCGACGACT.........................1812.0020020
.....................................................................................................................................................................................................................................................................................................................................................................................................TAAGGGGAACTTGTGTCGACGAC..........................2311.0011000
....................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGGGAACTTGTGTC................................1811.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................TTACAGCTTAAGGGGAACTTGT...................................2211.0010100
..............................................................................................................................................................................................................................................................................................................................................................................................................................TT-TTAGAGCTTGTTTAGAGGG..2111.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCGACGACTCTT-TTAGAGCTTGT..........2711.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................CTTAAGGGGAACTTGTGTCGAC.............................2211.0010100
................................................................................................................................................................................................................................CGTACTTAGGGAAATAT---------------------GAATCG..........................................................................................................................................................................2311.0010100
........................................................................................................................................................................................................................................................................................................................................................................................................GGGGAACTTGTGTCGACGACT.........................2111.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGACTCTT-TTAGAGCTTGT..........2411.0010010
............................................................................................................................................................................................................................................AATAT---------------------GAATCGCCCTTATCATAA-----------------------------------------------...............................................................................................................2311.0011000
......................................................................................................................................................................................................................................................................................................................................................................................................................GACGACTCTT-TTAGAGCTTGT..........2111.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCGACGACTCTT-TTAGA................2111.0010010
.................................................................................................................................................................................................................................................................................ATCATAA-----------------------------------------------T-GCTTGTG---GGG................................................................................................1811.0011000
......................................................................................................................................................................................................................GTAACTGAAGCGTACTTAGGGA..........................................................................................................................................................................................................2211.0010100
.................................................................................................................................................................................................................................................................................................................................................................TTTG-CGTTCTCC-----ACTTCTTTGCTTACAG...................................................2811.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................GCTTACAGCTTAAGGGGAACTTGTG..................................2511.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTT-TTAGAGCTTGTTTAGAGGGAC2411.0011000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAGCTTGTTTAGAGGG..1911.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGGGAACTTGTGTCGACGAC..........................2411.0010100
....................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGGGAACTTGTGTCGACG............................2211.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................CTTAAGGGGAACTTGTGTCGACGAC..........................2511.0010100
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTT-TTAGAGCTTGTTTAGAGG...2111.0010100
..............................................................................................................................................................................................................................................................................................................................................................................................................................TT-TTAGAGCTTGTTTAGAGG...2011.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCGACGACTCTT-TTAGAGCTTGT..........2611.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................................AGGGGAACTTGTGTCGACGACT.........................2211.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................................TCTT-TTAGAGCTTGTTTAGAGG...2211.0010100
dm3
AAT----GGGCGTGCTT-------C-TATAAGCAC---------------CTTATCTG--ATATTTTTGAAA---GG--------------------------------------------------TACTCCTATCAAACAAGGAACTACTTA-------------TTTGGTTGGGTAAAAAACAA--------ACTTATCTTGAA-T----TGTAACTGAAGTGTAG-------------------------------------------TATCATAA-----------------------------------------------T-GCTTGTG---GGGCCTATAAGTAAT-TG-CGTTTTTC-----ATTTCTTTGCTTACAGTTTAAGGGGAACTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGGGACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGGGAACTTGTGTCGACGAC..........................2418.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000000000010000000000000000000000000000000000000000000000000000000000000000001000000000000010100000
...........................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGTGTCGACGACT.........................1817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000030000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGGGAACTTGTGTCGACGACT.........................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000003000010000000
........................................................................................................................................................................................................................................................................................................................................................................................................GGGGAACTTGTGTCGACGACT.........................2117.0070000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100200000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................AAGGGGAACTTGTGTCGACG............................2016.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCGACGACTCTT-TTAGA................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000010000000000000000001000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
....................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGGGAACTTGTGTCGAC.............................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000000000000000001000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCGACGACTCTT-TTAGAGCT.............2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000110020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTTAAGGGGAACTTGTGTCGACGAC..........................2515.0050000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................ACAGTTTAAGGGGAACTTG....................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000000000000000001000100000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAAGGGGAACTTGTGTCGACGAC..........................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031000000
...............................................................................................................................................................................................................................................................................................................................................................................................ACAGTTTAAGGGGAACTTGTG..................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000100000000000000000000000000000000100000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................................AAGGGGAACTTGTGTCGAC.............................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000001100000
....................................................................................................................................................TACTTA-------------TTTGGTTGGGTAG..................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AGTTTAAGGGGAACTTGTG..................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010002000
................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCGACGACTCTT-TTAGAGCTTG...........2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAAGGGGAACTTGTGTCGACGACT.........................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GGGAACTTGTGTCGACGACTCTT-TTA..................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................TGAA-T----TGTAACTGAAGTG....................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GCCTATAAGTAAT-TG-CGTTT...........................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTTAAGGGGAACTTGTGTCGAC.............................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGGGAACTTGTGTCGACGACTC........................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGCTTGTTTAGAGGG..1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCGACGACTCTT-TTAGAGCTTG...........2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CGACGACTCTT-TTAGAGCTTGT..........2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000001000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CTTGTGTCGACGACTCTT-TTAGAGCT.............2613.0030000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGGGGAACTTGTGTCGACG............................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GGGAACTTGTGTCGACGACT.........................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCGACGACTCTT-TTAGAGCTTGT..........2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTT-TTAGAGCTTGTTTAGAGGG..2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GGGGAACTTGTGTCGACGAC..........................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGTGTCGACGACTCTT-TTAGAG...............2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GGGGAACTTGTGTCGACG............................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGACTCTT-TTAGAGCT.............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000000
...........................................................................................................................................................................................................................................................................................................................................................AAGTAAT-TG-CGTTTTTC-----ATTTC..............................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAAGGGGAACTTGTGTCGACGACTC........................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAAGGGGAACTTGTGTCGAC.............................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTTAAGGGGAACTTGTGT.................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TCTT-TTAGAGCTTGTTTAGAG....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTT-TTAGAGCTTGTTTAGAGG...2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010000000000000000000000000000
............................................................................................................................................................................................................................GAAGTGTAG-------------------------------------------TATCATAA-----------------------------------------------T-GCTTGTG---GG.................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
................................................................................................................................................................................................................................TGTAG-------------------------------------------TATCATAA-----------------------------------------------T-GCTTGTG---GG.................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTT-TTAGAGCTTGTTTAGAGGGA.2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................GTTTAAGGGGAACTTGTGTCGAC.............................2312.0020000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................................................................................................................................................................................................................................................................................................................................CCTATAAGTAAT-TG-CGTTTT..........................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAGCTTGTTTAGAGGG..1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGGGGAACTTGTGTCGAC.............................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTT-TTAGAGCTTGTTTAGA.....1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GACGACTCTT-TTAGAGCTTGT..........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000010000000000
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...............................................................................................................................................................................................................................................................................................................................................................................................................................T-TTAGAGCTTGTTTAGAG....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TTCTTTGCTTACAGTTTAAGGGGAACT......................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................GAAA---GG--------------------------------------------------TACTCCTATCAAAC.........................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..............................................................................................................................................................................................................................................................................................................................................................................................................CTTGTGTCGACGACTCTT-TTAGAGCTTG...........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
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......................................................................................................................................................................................................................................................................................................................................................................................TCTTTGCTTACAGTTTAAGGGGAACT......................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTGCTTACAGTTTAAGGGGAACTTG....................................2511.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTTGTTTAGAGGGAC1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TG-CGTTTTTC-----ATTTCTTTGCTT.......................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................GTTTAAGGGGAACTTGTGTCGA..............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GACGACTCTT-TTAGAGCTTGTTT........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...............................................................................................................................................................................................................................................................................................................................................................................................................................T-TTAGAGCTTGTTTAGAGGGAC2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................TCTG--ATATTTTTGAAA---GG--------------------------------------------------T......................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
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........................................................................................................................................................................................................................AACTGAAGTGTAG-------------------------------------------TATCATAA-----------------------------------------------T-G............................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
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.........................................................................................................................................................................................................................ACTGAAGTGTAG-------------------------------------------TATCATAA-----------------------------------------------T-GCTTGT.......................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
AAT----GGGCGTGCTT-------C-TATAA.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTTAAGGGGAACTTGTGTCGACGACTCT.......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
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.................................................................................................................................................................................................................................................................................................................................................................................................AGTTTAAGGGGAACTTGTGTCGACGAC..........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGTGTCGACGACTCT.......................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..........................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTGTGTCGACGACT.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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............................................................................................................................................................................................................................................................................................................................................................................................................................TCTT-TTAGAGCTTGTTTAGAGG...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................CTGAAGTGTAG-------------------------------------------TATCATAA-----------------------------------------------T-GC...........................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................CTTGAA-T----TGTAACTGAAGTGTAG-------------------------------------------T.....................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................GTTTAAGGGGAACTTGTGTCGACGAC..........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................AA-----------------------------------------------T-GCTTGTG---GGGCCTATAA.........................................................................................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................ACTTA-------------TTTGGTTGGGTAA..................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AGTTTAAGGGGAACTTGTGTC................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..............................................................................................................................................AGGAACTACTTA-------------TTTGGTTGGGT....................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AACTTGTGTCGACGACTCTT-TTAGA................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TACAGTTTAAGGGGAACTTGT...................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................................................................................................................................................................................TTGAA-T----TGTAACTGAAGTGTA..................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................GTAACTGAAGTGTAG-------------------------------------------TATCA.................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................ACTTGTGTCGACGACTCT.......................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................TTA-------------TTTGGTTGGGTAAAAAACAA--------AC.................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
droEre2
TG------GGCGTGCGT-------C-TATAAGAGC---------------C----CTG--ACAT--TTGAAA---GG--------------------------------------------------TACTCTTATCAAACAAGGAACTACTTA-------------TTTGGTTGG--AAAAAACAA--------ACTTATCTTGAA-C----TGTAACTGAAGAGTACTTAGGGAAAAAT---------------------GAATCCCGTCTATCAAAA-----------------------------------------------T-GCTTGTG---GGGCCTATAAGTAATTTG-CGTTCTCC-----ATTTCTTTGCTTACAGCTTAAGGGGAACTTGTGTCGACGACTCTT-TAAGAGCTTGTTTAGAGGGACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCGACGACTCTT-TAAGAGCTTGTT.........2819.0090000009
....................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGGGAACTTGTGTCGAC.............................2114.0041000300
.......................................................................................................................................................................................................................................................................................................................................................................................................AGGGGAACTTGTGTCGACG............................1912.0020000020
...................................................................................................................................................................................................................................................................................................................................................................................................CTTAAGGGGAACTTGTGTCGACGACT.........................2612.0020000110
...................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGACTCTT-TAAGAGCT.............2112.0020000200
..................................................................................................................................................................................................................................................................................................................................................................................................GCTTAAGGGGAACTTGTGTC................................2012.0020000200
..................................................................................................................................................................................................................................................................................................................................................................................................GCTTAAGGGGAACTTGTGTCGAC.............................2312.0020000200
.......................................................................................................................................................................................................................................................................................................................................................................................................AGGGGAACTTGTGTCGAC.............................1812.0021100000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAAGGGGAACTTGTGTCGAC.............................2012.0020000110
.........................................................................................................................................................................................................................................................................................................................................................................................................................GACTCTT-TAAGAGCTTGTTTAGAGG...2512.0021100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCTTGTTTAGAGGGAC1911.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCTTGTTTAGAGGGA.1811.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................CTTGTGTCGACGACTCTT-TAAGAGCT.............2611.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCGACGACTCTT-TAAGAGCTTGT..........2611.0010000100
............................................................................................................................................................................................................................................................................................................................................................................................................AACTTGTGTCGACGACTCTT-TAAGA................2511.0010000100
....................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGGGAACTTGTGTCG...............................1911.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................TAAGGGGAACTTGTGTCGA..............................1911.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGGGAACTTGTGTCGACGACT.........................2511.0010000010
.................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCGACGACTCTT-TAAG.................1911.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GACGACTCTT-TAAGAGCT.............1811.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TT-TAAGAGCTTGTTTAGAGG...2011.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................TT-TAAGAGCTTGTTTAGAGGG..2111.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................................AACTTGTGTCGACGACTCTT-TAAGAGCTT............2911.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................T-TAAGAGCTTGTTTAGAGG...1911.0010000100
..................................................................................................................................................................................................................................................................................................................................................................TTG-CGTTCTCC-----ATTTCTTTGCTTACA....................................................2611.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGACTCTT-TAAGAGCTTGT..........2411.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................ACTTGTGTCGACGACTCTT-TAAGAGCTT............2811.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................TACAGCTTAAGGGGAACTTGTG..................................2211.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCGACGACTCTT-TAAGAGCTTG...........2611.0010000010
................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCGACGACTCTT-TAAGAGCTT............2511.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTT-TAAGAGCTTGTTTAGAGG...2411.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................GCTTAAGGGGAACTTGTGTCGACGACT.........................2711.0011000000
droYak3
TG------GGCGTGCTA-------T-TATAAGGCTCTTATAGACAGACGCCTTATCTG--ACATTTAAAAAA---GG--------------------------------------------------TGCTCCTATCAAACAAGGAACTACTTA-------------TTTGGTTGG--GAAAAACAG--------ACTTATCTTGAT-T----TGTAACGGGA-------------ATAAC---------------------GAATCCCTCCTATCAAAA-----------------------------------------------T-GCTTGTG---GGGCCTATAAGTAATTTG-CGTTCTCC-----ATTTCTTTGCTTACAGCTTAAGGGGAACTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGGGACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................CTTAAGGGGAACTTGTGTCGACGACT.........................26111.001121210050000
....................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGGGAACTTGTGTCGACGACT.........................2516.00601300020000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTT-TTAGAGCTTGTTTAGAGG...2115.00504000010000
...................................................................................................................................................................................................................................................................................................................................................................................................CTTAAGGGGAACTTGTGTCGACGAC..........................2514.00400000000004
.........................................................................................................................................................................................................................................................................................................................................................................................................................GACTCTT-TTAGAGCTTGTTTAGAGGG..2612.00200000110000
...............................................................................................................................................................................................................................................................................................................................................................................................................................T-TTAGAGCTTGTTTAGAGG...1912.00200000020000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAAGGGGAACTTGTGTCGACGACT.........................2412.00201000010000
........................................................................................................................................................................................................................................................................................................................................................................................................GGGGAACTTGTGTCGACGACT.........................2112.00200200000000
...................................................................................................................................................................................................................................................................................................................................................................................................CTTAAGGGGAACTTGTGTCGAC.............................2212.00201100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTT-TTAGAGCTTGTTTAGA.....1912.00202000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAAGGGGAACTTGTGTCGAC.............................2012.00202000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GACTCTT-TTAGAGCTTGTTTAGAGGGA.2712.00201000010000
......................................................................................................................................................................................................................................................................................................................................................................................................AAGGGGAACTTGTGTCGACGACT.........................2312.00200000020000
...........................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGTGTCGACGACT.........................1812.00210010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTGTGTCGACGACT.........................1912.00201000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAAGGGGAACTTGTGTCGACGAC..........................2311.00100100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGACTCTT-TTAGAGC..............2011.00110000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGGGGAACTTGTGTCGACGACT.........................2211.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCGACGACTCTT-TTAGAGCTTGT..........2711.00110000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGTGTCGACGACTCTT-TTAGAGCTT............3011.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................GCTTAAGGGGAACTTGTGTCGACG............................2411.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TT-TTAGAGCTTGTTTAGAGGG..2111.00100000010000
.....................................................................................................................................................ACTTA-------------TTTGGTTGG--GAAAAAC.............................................................................................................................................................................................................................................................2111.00100000010000
..................................................................................................................................................ACTACTTA-------------TTTGGTTGG--GA..................................................................................................................................................................................................................................................................1911.00100010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGACTCTT-TTAGAGCT.............2111.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CGACGACTCTT-TTAGAGCTTGTTT........2411.00100001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTT-TTAGAGCTTGTTTAGAGGGAC2711.00101000000000
.....................................................ATCTG--ACATTTAAAAAA---GG--------------------------------------------------TG.....................................................................................................................................................................................................................................................................................................................2111.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGGGGAACTTGTGTCGAC.............................1811.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GACGACTCTT-TTAGAGCTT............1911.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGGGAACTTGTGTCGACGAC..........................2411.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................AACTTGTGTCGACGACTCTT-TTAGAGCT.............2811.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................TTACAGCTTAAGGGGAACTTGTGTCGAC.............................2811.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................GGGAACTTGTGTCGACGACT.........................2011.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGACTCTT-TTAGAGCTT............2211.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGGGAACTTGTGTCGAC.............................2111.00100100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGTGTCGACGACTCTT-TTAGAGCT.............2911.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAGCTTGTTTAGAGGG..1911.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGGGAACTTGTGTCGACGACTCTT-.....................2811.00100010000000
....................................................................................................................................................................................................................................................................................................................................................GGCCTATAAGTAATTTG-CGT.............................................................................2011.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................TTACAGCTTAAGGGGAACTT.....................................2011.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................TCTT-TTAGAGCTTGTTTAGAGG...2211.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................GCTTAAGGGGAACTTGTGTCGACGACT.........................2711.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................AAGGGGAACTTGTGTCGACGA...........................2111.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................T-TTAGAGCTTGTTTAGAGGG..2011.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGGGAACTTGTGTC................................1811.00100000010000
.....................................................................................................................................................................................AAACAG--------ACTTATCTTGAT-T----TGTAACGGGA-------------..........................................................................................................................................................................................................2911.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTT-TTAGAGCTTGTTTAGAG....2011.00101000000000
droEug1
TG------AGCATGTTAG------C-TATAAGAAT---------------CTTATCTG--ACAT--TTGAAAGGAGG--------------------------------------------------TAGCATTATCGAATGAGGAACTATTTA-------------GTGGAAT-----CAAAACAA--------AATTATCTTTAA-T----TTTAACTGAAGAGTACTTAGGAAA----ACCATA------------------TCATTCTTATCAAAA---------------------TGAT-----------------CAACGT-ACTTTTG---GGGCCTATAAGTAATGTG-CGTTCTCC-----ATTTATTTGCTTACAGCTTAAGGGGAACTTGTGCCGACGACTCTT-TTAGAGCTTGTTTAAAGGGACSizeHit CountTotal NormTotal
No Reads
droBia1
TA------GGCGTGTTTG------C-CATACGAAT---------------CTTATCTG--GCGC--TTGA-A---GG--------------------------------------------------TAGCCCTATCGAACGAGGAACTGTTGG-------------GCT--TTGG--GAAAAACAA--------AATTATCTTTAA-T----TGTATCTGAAGAGCACTTTGAAAA----ATCCTC------------------CTG-TCTTATCATAG---------------------TGAT-----------------CAACT--GCTTCTG---GGGCCTATAAGTAATGTG-CGTTCTCC-----ATTTCTTTGCTTACAGCTTAAGGGGAACTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGGGACSizeHit CountTotal NormTotal
No Reads
droTak1
--------GGCGTGTGG-------C-TATAAGAAT---------------CTTATCTG--ACAT--TTGAAA---GG--------------------------------------------------TGGCCCTATCGAATGAGGAACTATTTGAACCATTTTGA-----GGTT-G--AAAAAACAA--------AATTATCTTTAA-T----TGTAACTGAAGAGTACTTAGGAAA----ATCCCC------------------CTGACCTTATCATAA---------------------TGAT-----------------CACCGT-TCTTCTG---GGGCCTATAAGTAATGTG-CGTTCTCC-----ATTTCTTTGCTTACAGCTTAAGGGGAACTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGGGACSizeHit CountTotal NormTotal
No Reads
droEle1
TA------TGCGTGTAGG------CGTAAGTGAAT---------------TTTATCTATAAGAA--TTGAAA---GA--------------------------------------------------CAGACCTATCAAATGAGGAACCATTT-----------------GGTT----GAAAAACAA--------AATTATCTTTAA-T----TGTCACTGAAGATTATTAAGGAAA----ATCCAT------------------TCGCCCTTATCAAAC---------------------TAAT-----------------CATCGT-G-TTGTG---GGGCCTATAAGTAATGTG-CGTTCTTC-----ATTTCTTTGCTTACAGCTTAAGGGGAACTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGGGACSizeHit CountTotal NormTotal
No Reads
droRho1
GA-------GTGTGGTT-------C-CAAGAGAAT---------------CTTATCTATAAGAT--TTGAAA---GG--------------------------------------------------AAGCCCTATCGAATGAGGAAACATTT-----------------GGTT----GAAAAACAA--------AATTATCTTTAA-T----TGTAACTGAAAAGTAATTAGGAAA----ATCCAC------------------TCGCCCTTATCAAAT---------------------TGAT-----------------CACCTT-G-TTTTG---GGGCCTATAAGTAATGTG-CGTTCTTC-----ATTTCTTTGCTTACAGCTTAAGGGGAACTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGGGACSizeHit CountTotal NormTotal
No Reads
droFic1
TA------GGCGTGTGTTTGGGGGC--CCAAGAAT---------------CTTATCTG--ACAT--TTGAAA---GG--------------------------------------------------CGCCCCTATCGAATCAGGAACCGTTTG----------A-----GGTT----CAAAAACAA--------AATTATCTTTAA-T----TGTAACTGAAGAGTACTTAGCGAA----ATCCCA------------------TCGCCCTTATCATAA---------------------TGAT-----------------CACCGT-A-CTGTG---GGGCCTATAAGTAATGCG-CCTTCTCC-----ATTTCTTTGCTTACAGCTTAAGGGGAACTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGGGACSizeHit CountTotal NormTotal
No Reads
droKik1
G--------GCGTGTGG-------C-CGAGAGATT---------------CTTATCTG-----------AAA---GTCGACT------------------------------------------------ACGTATCGAATGAGGAACCATTTG----------CTGTTTAGGGCG--GAAAAATAC----ACCAAATTATCTTTAA-T----TGTAACTGAAGAGTACTTAGGAAA----ATCCTATCTAT--GTACCCGGGC----CCCTTATCATCGTCAAAACAATAGATATATCAACGAT-----------------CACCTTACCTGTTG---GGGCCTATAAGTAATGTG-CGTTCTCC-----GTTTCTTTGCTTACAGCTTAAGGGGAACTTGTGTCGACGACTCTTTTTAGAGCTTGTTTAGAGGGACSizeHit CountTotal NormTotal
No Reads
droAna3
AACTATTTG----------------------------------------------CCG--ACGCCTTTGA------G--------------------------------------------------TTCTCTTATCAAATAGGGAAGCAACTT-------------TTTGGGTGG--CAAAAATATCATAAT-AAAATATCTCTAA-T----TGTAACTGAAGAGCACTTAT-----------------------------AAAT----CTTATT-TTA---------------------CGAT-----------------AAACCA-G-CTGTG---GGGCCTATAAGTAATGCG-CCTTCTCC-----ACTTCTTTGCTTACAGCTTAAAGGGAACTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGGGACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................TCTT-TTAGAGCTTGTTTAGAGG...2212.002000020
......................................................................................................................................................................................................................................................................................................................................................................................................AAAGGGAACTTGTGTCGACGACT.........................2312.002010010
......................................................................................................................................................................................................................................................................................................................................................................................................AAAGGGAACTTGTGTCGAC.............................1912.002010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTT-TTAGAGCTTGTTTAGAGGGA.2312.002000020
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTT-TTAGAGCTTGTTTAGAGG...2112.002010010
........................................................................................................................................................................................................................................................................................................................................................................................................AGGGAACTTGTGTCGACGACT.........................2112.002101000
.....................................................................................................................................................................................................................................................................................................................................................GCCTATAAGTAATGCG-CCTTCTC.........................................................................2311.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................GCTTAAAGGGAACTTGTGTCGAC.............................2311.001000010
......................................................................................................................................................................................................................................................................................................................................................................................................AAAGGGAACTTGTGTCGACGACTCTT-.....................2611.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTGTGTCGACGACT.........................1911.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................CTTAAAGGGAACTTGTGTCGACGACT.........................2611.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CGACGACTCTT-TTAGAGCTT............2011.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................CTTAAAGGGAACTTGTGTC................................1911.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTT-TTAGAGCTTGTTTAGA.....1911.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................TCTT-TTAGAGCTTGTTTAGAGGGA.2411.001000010
.....................................................................................................................................................................................................................................................................................................................................................................................................TAAAGGGAACTTGTGTCGACGACT.........................2411.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAGCTTGTTTAGAGGGA.2011.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTT-TTAGAGCTTGTTTAGAGG...2411.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGACTCTT-TTAGAGCTTGT..........2411.001000010
......................................................................................................................................................................................................................................................................................................................................................................................................................GACGACTCTT-TTAGAGCTTGT..........2111.001000001
..CTATTTG----------------------------------------------CCG--ACGCCTTTGA------..........................................................................................................................................................................................................................................................................................................................................................................2011.001001000
.............................................................................................................................................................................................................................................................................................................................................................................................TTACAGCTTAAAGGGAACTTGTGT.................................2411.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................CTTAAAGGGAACTTGTGTCGACG............................2311.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................AACTTGTGTCGACGACTCC.......................1911.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................CTTAAAGGGAACTTGTGTCGAC.............................2211.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTT-TTAGAGCTTGTTTAGAGGG..2511.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................AGGGAACTTGTGTCGACG............................1811.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................TTAAAGGGAACTTGTGTCGACGACC.........................2511.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGACGACTCTT-TTAGAGCT.............2211.001001000
.............................................................................................................................................................................................................................................................................................................................................................................................................ACTTGTGTCGACGACTCTT-TTAGAGCT.............2711.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGTGTCGACGACC.........................1811.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................GGGAACTTGTGTCGACGACTCT.......................2211.001000010
droBip1
ATT----TGGCGAAGCC-------T-TTCGGGGCT---------------CTTATCAA--AC------------------------------------------------------------------AGCCCTATCGAATAGGGAAGCAACTT-------------TTTGGGTAGC-GAAAAATAG--------CATTATCTCTAA-T----TGTAACTGAAGAGCACTTAT-----------------------------AAATCATTTT-----TTA---------------------CGAT-----------------AAACCA-G-CTGTG---GGGCCTATAAGTAATGCG-CCTTCTCC-----AATTCTTTGCTTACAGCTTAAAGGGAACTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGGGACSizeHit CountTotal NormTotal
No Reads
dp5
TG------GGGG------------C-CGTGGG------------------CTTATCAG--ACGT--TTGAAA---GGCGCCCAGCC-----------------------------------------CAGCCCTATCGAACAAGGAACTATA-A---------------TGTTTGG--CGAAAACAACTCTAC--TACTATCTGTAA-T----TACAATTGAAGAGGACTTAA---A----ATCAAATCTAGAGCTATTCTCGAA----TCTTATCACTG---------------------CGAT-----------------CTCCAT-G-TTGTG---CGCCCAATAAGTAATGCG-CCTTCTCTTCTTTATTCTTTAATTTACAGCCTAAGGGGAACTTGTGTCGACGACTCTTTTTAGAGCTTGTTTAGAGGGATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTTAGAGCTTGTTTAGA.....2012.0020200000000
....................................................................................................................................................................................................................................................................................................................................................................................................CTAAGGGGAACTTGTGTCGACGACT.........................2512.0020010001000
.........................................................................................................................................................................................................................................................................................................................................................................................................GGGAACTTGTGTCGACGACT.........................2012.0020100001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTAGAGCTTGTTTAGAGG...2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GACGACTCTTTTTAGAGCTTGT..........2211.0010000100000
......................................................................................................................................................................................................................................................................................................................................................................................................AAGGGGAACTTGTGTCGAC.............................1911.0010000010000
......................................................................................................................................................................................................................................................................................................................................................................................................AAGGGGAACTTGTGTCGACG............................2011.0010100000000
..........................................................................................................................................................................................ACTCTAC--TACTATCTGTAA-T----TAC..............................................................................................................................................................................................................................2311.0010001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGGGGAACTTGTGTCGACGACT.........................2211.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTAGAGCTTGTTTAGAGGG..2211.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................AAGGGGAACTTGTGTCGACGACT.........................2311.0010010000000
.............................................................................................................................................................................................................................................................GCTATTCTCGAA----TCTTATCACTG---------------------.........................................................................................................................................2311.0010000100000
.................................................................................................................................................................................................................................................................................................................................................................................................AGCCTAAGGGGAACTTGTGT.................................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................CTCCAT-G-TTGTG---CGCCCAA............................................................................................1911.0010100000000
...........................GTGGG------------------CTTATCAG--ACGT--TTGAAA---GG.........................................................................................................................................................................................................................................................................................................................................................................2511.0010000000001
..........................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTGTGTCGACGACTCTTT.....................2311.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAAGGGGAACTTGTGTCGACGACTC........................2511.0010000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTTAGAGCTTGTTTAGAGG...2211.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................CCTAAGGGGAACTTGTGTCGAC.............................2211.0010010000000
........................................................................................................................................................................................................................................................................................................................................................................................................GGGGAACTTGTGTCGACGACT.........................2111.0010001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTGTGTCGACGACTCTTTTTAGAGCTTGT..........2911.0010000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTTAGAGCTTGTTTAGAGGG..2311.0010100000000
droPer2
GG------GGGGCG----------C-CGTGGG------------------CTTATCAG--ACGT--TTGAAA---GGCGCCCAGCC-----------------------------------------CAGCCCTATCGAACAAGGAACTATA-A-------------TTT--TTGG--CGAAAACAACTCTAC--TATTATCTGTAA-T----TACAATTGAAGAGGACTAAA---A----ATCAAATCTAGAGCTATTATCGAA----TCTTATCACTG---------------------CGAT-----------------CTCCAT-G-TTGTG---GGCCCTATAAGTAATGCG-CCTTCTCTTCTTTATTCTTTAATTTACAGCCTAAGGGGAACTTGTGTCGACGACTCTTTTTAGAGCTTGTTTAGAGGGATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................GAACTTGTGTCGACGACT.........................18114.00141400000
......................................................................................................................................................................................................................................................................................................................................................................................................AAGGGGAACTTGTGTCGACGACT.........................2318.008501002
...................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGACTCTTTTTAGAGCTT............2313.003300000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGGGGAACTTGTGTCGACGACT.........................2213.003300000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTTTTTAGAGCTTGTTTAGAGGG..2612.002010001
...................................................TTATCAG--ACGT--TTGAAA---GGC........................................................................................................................................................................................................................................................................................................................................................................2012.002200000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGGGGAACTTGTGTCGAC.............................1811.001010000
..............................................................................................................................................................................................................................................................................................................................................TG---GGCCCTATAAGTAATGCG-C...............................................................................2111.001001000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGGGGAACTTGTGTCGACG............................1911.001000001
..............................GG------------------CTTATCAG--ACGT--TTGAAA---GGC........................................................................................................................................................................................................................................................................................................................................................................2311.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................AAGGGGAACTTGTGTCGACGACC.........................2311.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGACTCTTTTTAG.................1811.001100000
...........................................................................................................................................................................................................................................................GAGCTATTATCGAA----TCTTATCACTG---------------------C........................................................................................................................................2611.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................CTAAGGGGAACTTGTGTCGACGACT.........................2511.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................ACTTGTGTCGACGACTCT.......................1811.001100000
....................................................TATCAG--ACGT--TTGAAA---GGC........................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGCTTGTTTAGAGGG..1811.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................CTAAGGGGAACTTGTGTCGAC.............................2111.001001000
.........................................................................................................................................................................................................................................................................................................................................................................................................GGGAACTTGTGTCGACGACT.........................2011.001001000
.............................................................................................................................................................................................................................................................GCTATTATCGAA----TCTTATCACTG---------------------C........................................................................................................................................2411.001100000
.....................................................ATCAG--ACGT--TTGAAA---GGC........................................................................................................................................................................................................................................................................................................................................................................1811.001001000
...................................................................................................................................................................................................................................................................................................................................................................................................CCTAAGGGGAACTTGTGTCGACGACT.........................2611.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTTGTTTAGAGGGAT1811.001010000
droWil2
TA------TT---GCTT-------T-TA---GGGG---------------CTTATCTC--GGCC--ATAT-A---CA---------TACATATACATATATATACTCTAAACACTCTTCTATCTGTTTGCGTTTATCGAATGAGGAACTAATTT-------------GGT--TTGT---CTATAGTT--------TGTTATCTTTGAATTTTTTGT-ACTTAAGGGTGTT-------------------------------------------------A------CAATTGATATGTTATCGTTAGGAGATTTCTTATTTACTCCTCACCCATTAAATAAACATACAAATAATGA--TGATCTTT-----CTATATTTCATTTCAGTCTAAAGGGAACTTGCGTCGACCACTCTTTTTAGAGCTTGTTTGGTGGTACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................................................................................................................................CTAAAGGGAACTTGCGTCGACC............................22115.0015001230
......................................................................................................................................................................................................................................................................................................................................................................................................AAAGGGAACTTGCGTCGACC............................20112.001201830
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTTAGAGCTTGTTTGGTGGT..2319.00900351
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTTTTTAGAGCTTGTTTGGT.....2317.00700160
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTTAGAGCTTGTTTGGT.....2016.00600420
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTTAGAGCTTGTTTGGTG....2114.00400130
......................................................................................................................................................................................................................................................................................................................................................................................................................GACCACTCTTTTTAGAGCTTGT..........2214.00400220
.......................................................................................................................................................................................................................................................................................................................................................................................................AAGGGAACTTGCGTCGACC............................1912.00201010
.....................................................ATCTC--GGCC--ATAT-A---CA---------TAC.............................................................................................................................................................................................................................................................................................................................................................1912.00220000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTGCGTCGACCACTCTTTTTAGAGC..............2512.00220000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAGAGCTTGTTTGGT.....1812.00200020
............................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTTTAGAGCTTGTTTGGT.....2112.00200110
...............................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAGAGCTTGTTTGGTGGT..2112.00200110
..............................................................................................................................................................................................................................................................................................................................................................................................................CTTGCGTCGACCACTCTTTTTG..................2212.00220000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTGCGTCGACCACTCTTTTTAGAG...............2412.00220000
.........................................................................................................................................................................................................................................................................................................................................................................................................................CACTCTTTTTAGAGCTTGTTTGGT.....2412.00200110
..................................................................................................................................................................................................................................................................................................................................................................................................GTCTAAAGGGAACTTGCGTC................................2012.00200200
..............................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTAGAGCTTGTTTGGT.....1912.00200110
....................................................................................................................................................................................................................................................................................................................................................................................................CTAAAGGGAACTTGCGTCGAC.............................2112.00200200
..............................................................................................................................................................................................................................................................................................................................................................................................................CTTGCGTCGACCACTCTTTTTAG.................2312.00220000
....................................................................................................................................................................................................................................................................................................................................................................................................CTAAAGGGAACTTGCGTCGACCACTCT.......................2712.00200200
............................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTTTAGAGCTTGTTTGGTG....2211.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................AAAGGGAACTTGCGTCGACCACTCT.......................2511.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................CTAAAGGGAACTTGCGTC................................1811.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................GACCACTCTTTTTAGAGCTT............2011.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................CTAAAGGGAACTTGCGTCGACCACT.........................2511.00110000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAAAGGGAACTTGCGTCGA..............................1911.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGAGCTTGTTTGGTG....1811.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCTTGTTTGGTGGTAC1911.00100001
.................................................................................................ATATATACTCTAAACACT...................................................................................................................................................................................................................................................................................................................................1811.00110000
.............................................................................................................................................................................................................GAATTTTTTGT-ACTTAAGGGTGTT-------------------------------------------------A------CA......................................................................................................................................................2711.00100001
............................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTTTAGAGCTTGTTTGGTGGTAC2611.00100001
............................................................................................................................................................................................................................................................................................................................................................................................................AACTTGCGTCGACCACTCTTTTTA..................2411.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................GTCTAAAGGGAACTTGCGT.................................1911.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTAGAGCTTGTTTGGTGG...2111.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTTAGAGCTTGTTTGGTGG...2211.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTAGAGCTTGTTTGGTGGT..2211.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................AAGGGAACTTGCGTCGACCACT.........................2211.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTTTTAGAGCTTGTTTGGT.....2211.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTTTTTAGAGCTTGTTTGGTGGT..2611.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTTTTTAGAGCTTGTTTGGTGGTA.2711.00100100
.............................................................................................................................................................................................................................AAGGGTGTT-------------------------------------------------A------CAATTGATA...............................................................................................................................................1911.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................CTAAAGGGAACTTGCGTCGACCACTCTT......................2811.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAGAGCTTGTTTGGTGG...2011.00100010
........................................................................................................................................................TT-------------GGT--TTGT---CTATAGTT--------TGT................................................................................................................................................................................................................................................2011.00100001
................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGAGCTTGTTTGGTGGT..2011.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................CGACCACTCTTTTTAGAGCTTGT..........2311.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAGAGCTTGTTTGGTG....1911.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................ACTTGCGTCGACCACTCTTTTTAG.................2411.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................AGTCTAAAGGGAACTTGCGTC................................2111.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGAGCTTGTTTGGTGG...1911.00100100
droVir3
TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTAAG-----------------------------------------------T-ACTTATG---GAATCCATAAATAATATA-AACTATTC-----T-CTTTTCGTTTTCAGTCTAAAAGGAAGTTGTGTCGACGACTCTT-TTAGAGCTTGTTTAGAGTTTCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGACGACTCTT-TTAGAGCTTGT..........2514.004000200000000000000000010000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGTCGACGACTCTT-T....................1912.002000000000000000000100010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGAAGTTGTGTCGAC.............................1912.002000000010000001000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCGACGACTCTT-TTAGA................2112.002011000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAAGTTGTGTCGACGA...........................2011.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GGAAGTTGTGTCGACGACTCTT-.....................2211.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCGACGACTCTT-TTAGAGCTT............2511.001000000000000010000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................GTCTAAAAGGAAGTTGTGTCGACGACT.........................2711.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCGACGACTCTT-TTAGAGC..............2311.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGAAGTTGTGTCGACGACTC........................2411.001000000000001000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGAAGTTGTGTCGA..............................1811.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGACGACTCTT-TTAGAGCT.............2211.001000000000000000010000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................CTAAAAGGAAGTTGTGTCGAC.............................2111.001000000000100000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAAGTTGTGTCGAC.............................1811.001000000000001000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................T-TTAGAGCTTGTTTAGAGTT..2011.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTT-TTAGAGCTTGTTTAGA.....1911.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TT-TTAGAGCTTGTTTAGAGTT..2111.001000000010000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGTCGACGACTCTT-TTAGAGCTTGT..........2911.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................................................................AAGGAAGTTGTGTCGACGACT.........................2111.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................................................TCTAAAAGGAAGTTGTGTCGACGAC..........................2511.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GACGACTCTT-TTAGAGCTTGTTTAGAGT...2811.001000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCGACGACTCTT-TTAGAGCTTG...........2511.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................GGAAGTTGTGTCGACGACC.........................1911.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACGACTCTT-TTAGAGCTTGT..........2411.001100000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................CGACTCTT-TTAGAGCTTGTTTAGA.....2411.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTT-TTAGAGCTTGTTTAGAGT...2111.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAAGTTGTGTCGACGACTC........................2311.001100000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGTCGACGACTCTT-TTAGAGCTT............2711.001000000000000000000000000000000000000000000000000000000000001000
droMoj3
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTCCTTTCAGTCTAAAAGGAAGTTGTGTTGACGACTCTT-TTAGAGCTTGTTTAGAGCTTCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGTTGACGACTCTT-TTAG.................2220.501000001
...........................................................................................................................................................................................................................................................................................................................................................................................................GAAGTTGTGTTGACGACTCTT-.....................2120.501100000
.........................................................................................................................................................................................................................................................................................................................................................................................................AGGAAGTTGTGTTGACGACTCTT-.....................2320.501100000
..............................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGTTGACGACTCTT-TTAGAGCTT............2720.501000001
..............................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGTTGACGACTCTT-TTAGAGCTTG...........2820.501100000
.................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGACGACTCTT-TTAGAGCTT............2420.501100000
.............................................................................................................................................................................................................................................................................................................................................................................................................AGTTGTGTTGACGACTCTT-TTAGA................2420.501100000
......................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGAAGTTGTGTTGACGACT.........................2320.501000001
.......................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAAGTTGTGTTGACGACT.........................2220.501000001
...................................................................................................................................................................................................................................................................................................................................................................................................................GTTGACGACTCTT-TTAGAGCTTGT..........2420.501000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................GACTCTT-TTAGAGCTTGTTTAGAGCTT.2720.501010000
droGri2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTAAGTAATGTGAAGTTGTTT-----TCTGTTTTCTTTGCAGTCTAAAAGGAAGTTGTGTCGACGACTCTT-TTAGAACTTGTTTAAAG-TTCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGAAGTTGTGTCGACGACT.........................2311.00101
........................................................................................................................................................................................................................................................................................................................................................................................................AAGGAAGTTGTGTCGACGACTCTT-.....................2411.00101
......................................................................................................................................................................................................................................................................................................................................................................................................................GACGACTCTT-TTAGAACTTGTTTA.......2411.00110
......................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGAAGTTGTGTCGACG............................2011.00110

Generated: 05/18/2015 at 10:58 PM