ID:

dsi_9877

 Coordinate:

x:8330204-8330364 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.1 -17.1 -17.1

Flybase annnotation

intron [x_8330392_8330607_-]; exon [x_8330365_8330391_-]; CDS [x_8330365_8330391_-]; exon [x_8329437_8330203_-]; CDS [x_8329437_8330203_-]; intron [x_8330204_8330364_-]

No Repeatable elements found

Sense Strand Reads

-----------------------###########################-----------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TAATGCTGCACTACAACAAACAGACTGGATCAATGCCGTTTTCGACATGGGTAACACTCAGACGCATGCACTTTCTATGAAATTATGTTTATTATTTAATTATTGAAAATCGGGAAAAACAAACGTTTATTTTCGTATACAAATCCATTTGCAGTTCGTAAACTCTACCGTGTATTCGCATCTAATAGTGACATGTTTTTCCTTTCCACAGGTGATGAACCAGGACGTGAAGAAGGAGAACCCCTTGCAGTTTAGGTTCCG
**********************************************************.....(((((((((....(((........((((.((......)).))))...((((((((((....)))).))))))(((((.......(((((.....))))).......)))))....))).....)))).)))))....************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 M053
female body
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
.....................................................................................................................................................................................................................GATGAACCAGGACGTGAAGAA........................... 21 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GATGAACCAGGACGTGAAGAAGGA........................ 24 0 1 2.00 2 0 0 0 1 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................GATGAACCAGGACGTGAAGAAGGAGA...................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................AGGACGTGAAGAAGGAGAACC................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................ATGAACCAGGACGTGAAGAAGGG........................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GAACCAGGACGTGAAGAAGGA........................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GTGATGAACCAGGACGTGAAGAAGGA........................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CGTGAAGAAGGAGAACCCCC................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................AAAACAAACGTTTATTTTCGC............................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................AGGACGTGAAGAAGGAGAACCC.................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GAACCAGGACGTGAAGAAGGAGAACCCCT................ 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GAACCAGGACGTGAAGAAGGAGAACCCC................. 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GAACCAGGACGTGAAGAAGGAGAACC................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CCAGGACGTGAAGAAGGAGA...................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................CAGACGCATGCACTTTCT......................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTCGCATCTAATAGTGACATGTTTTT............................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AACCAGGACGTGAAGAAGGAGAACCC.................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................GTGAAGAAGGAGAACCCC................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GATGAACCAGGACTTGAAG............................. 19 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................AGGTGATGAACCAGGACGTGAA.............................. 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................TGAACCAGGACGTGAAGAAGGAGAACCC.................. 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................ACCAGGACGTGAAGAAGGAGAACCCCT................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................GAAGAAGGAGAACCCCTTGCAGTTTAGG..... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................ACCGGAAAAAACAAACGATTATTT................................................................................................................................. 24 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................TTATTGAATATCGGTAAAAAC............................................................................................................................................. 21 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................TGAACCAGGACGTGGATA............................ 18 2 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................TATTTGCATCTAGTAGAGACA.................................................................... 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1
....................................................................................................TTTTGAAAGTCGGGAAAAAAAA........................................................................................................................................... 22 3 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................TGAACCAGCACGTGA............................... 15 1 6 0.17 1 0 0 0 0 0 0 0 0 0 1 0
..............................................................................................................................................................................................................AAAAGGCGATGAACCAGGAC................................... 20 3 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................ATAGTGACGTGTTTT.............................................................. 15 1 11 0.09 1 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................................................................GAGGAGAACCCCTTG.............. 15 1 12 0.08 1 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

ATTACGACGTGATGTTGTTTGTCTGACCTAGTTACGGCAAAAGCTGTACCCATTGTGAGTCTGCGTACGTGAAAGATACTTTAATACAAATAATAAATTAATAACTTTTAGCCCTTTTTGTTTGCAAATAAAAGCATATGTTTAGGTAAACGTCAAGCATTTGAGATGGCACATAAGCGTAGATTATCACTGTACAAAAAGGAAAGGTGTCCACTACTTGGTCCTGCACTTCTTCCTCTTGGGGAACGTCAAATCCAAGGC
*************************************************************.....(((((((((....(((........((((.((......)).))))...((((((((((....)))).))))))(((((.......(((((.....))))).......)))))....))).....)))).)))))....********************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
.....................................................................................................................................GCATATGTTTAGGAAGGCG............................................................................................................. 19 3 17 0.12 2 2 0
............TGGTGTTTGTCTGACCGA....................................................................................................................................................................................................................................... 18 2 15 0.07 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:8330154-8330414 - dsi_9877 T-AATGCTGCACTACAA----CA-------------AA------------CAGACTGGATCAATGCCGTTTTCGACATGGGTAACACT-C-AGA---CGCATGCACTTTC----------------------TA-----------------------------------TGAAATTATGTTTATTATTTAAT--TA----TTGAAAATCGGG---------AAA-A---ACAAACGTT-----TATTTTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATACAAATC--------------------------------------------------------------------------------------------------------------------CATTTGCAG-------------------------TTCGTAAAC------------------------------------TCT---ACCGTGTA-T---------------------------------------------------------TCGCATCTAATAGTG-A------------------CATGT-------------------------------------T-T-TTCCTTT-CCACAGGTGATGAACCAGGACGTGAAGAAGGAGAACCCCTTGCAGTTTAGGTTCCG
droSec2 scaffold_34:141280-141538 - T-AATGCTGCACCACAA----CA-------------AA------------CAGACTGGATCAATGCCGTTTTCGACATGGGTAACACA-C-AGA---CGCATGCACTTTC----------------------TA-----------------------------------TGAAATTATGTTTATTATTTAAT--TA----TTGA--ATCGGG---------AAA-A---CCAAACGTT-----TAATTTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATACAAAAC--------------------------------------------------------------------------------------------------------------------CATTTGCAG-------------------------TTCGTAAAC------------------------------------TCT---ACCGTGTA-T---------------------------------------------------------TCGCATCTAATAGAT-A------------------AATGT-------------------------------------T-T-ATCCTTT-TCTTAGGTGATGAACCAGGACGTGAAGAAGGAGAACCCCTTGCAGTTTAGGTTCCG
dm3 chrX:8769844-8770118 - T-AATGCTGCACCACAA-CAACA-------------AA------------CAGACTGGATCAATGCCGTTTTCGACATGGGTAACACT-C-AGACGCCGCATGCACTTTT----------------------T---TAT---------------------------CTATGATATTATGTTTATTATTTCAT--TA----TTGA--ATCGGG---------AAA-A---CCAAACGTTTTTTTTTTTTTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATACAAATC--------------------------------------------------------------------------------------------------------------------CATTTGCAG-------------------------TTTGTAAAC------------------------------------TTT---AGCGTGCA-T---------------------------------------------------------TCGCATCTAATAGTG-A------------------TATGT-------------------------------------T-T-TCGCTTT-TCACAGGTGATGAACCAGGACGTGAAGAAGGAGAATCCCTTGCAGTTTAGGTTCCG
droEre2 scaffold_4690:6330442-6330693 + T-AATGCTGCACCACAA----CA-------------AA------------CAGACTGGATCAATGCCGTTTTCGACATGGGTAACACT-C-AGA---CGAATGCACTTTC----------------------GA-------------------------------------------TGTTTATTATTTATT--TA----TCGA--ATCAGG---------AAA-A---CCAATTGTT-----TATTTTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTACAAATC--------------------------------------------------------------------------------------------------------------------CATTTGCAG-------------------------TTTATAAAC------------------------------------TCT---CCTGCTTAGC---------------------------------------------------------CTCCATCTAATAGAG-A------------------AATGT-------------------------------------T-T-TGCCTTT-GCACAGGTGATGAACCAGGACGTGAAGAAGGAGAACCCCTTGCAGTTTAGATTCCG
droYak3 X:12533267-12533531 + T-AATGCTGCACCACAA----CA-------------AA------------CAGACTGGATCAATGCCGTTCTCGACATGGGTAACACT-C-AGA---CGAATGCACTTTG----------------------A----AA---------------------------TTATGATATTATGTTTATTATTTATT--TA----TCGA--ATCAGG---------AAAAA---CCAATTGTT-----TATTTCCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTACAAATC--------------------------------------------------------------------------------------------------------------------CATTTGCAG-------------------------TTTATAAAC------------------------------------TTTC--ATTGCAAT-T---------------------------------------------------------CCGCATCTAATAGAG-A------------------CATGT-------------------------------------T-T-TCGCTAT-CCACAGGTGATGAACCAGGATGTGAAGAAGGAGAACCCCTTGCAGTTTAGATTCCG
droEug1 scf7180000408176:196776-197090 - TTAATGCTGCACCACAT----GAAAAAAAACAAACAAATGTATAAAAATCTAGACTGGATCAATGCCGTTTTCGACATGGGTAACACT-C-AGA---AAATTGCACTAAA----------------------TT-------------------TGTATTTT------TAA-----TTTG----------------A----TTTA--ATCTGG---------AAA-AAT-CCAATT---------------------------AAAT--------TATAGACCAGCTTCTCTATTAAC-------------------------------------------------------------------GAAG------------------------------------------------------------------------------TTCG--------------------------TCTGTAATCTAAAAACCAAAATTCTATATTATATCAAAAA----------------------------------------------------------------------------------------T------------------------------------TCT---CTATTAAAAC---------------------------------------------------------ATCTACTAAAAAG---G------------------TAAAT-------------------------------------C-T-TCCCTTTCGTATAGGTGATGAACCAGGACGTTAAGAAGGAGAACCCCTTGCAGTTCAGATTCCG
droBia1 scf7180000301760:2503105-2503416 - T-AATGCTGCACCACAA----CA-------------AA------------AAGACTGGATCAATGCCGTTCTCGACTTGGGTAACACT-C-AGC---C-AATGCACTCTA--------------------CCTATATAA-----------------------------------TTATGATTTT----------CA----TCAG--ATCTGT---------AAA-A---TTGTATTTT-----TGAATTTGTGTACAATAT---------------------------------------------------------------------------------------------------------------TGATTTAATATTCAATCTGATA----TACTTATAGTG--ATTGGTTTTGG------------------------TTTG--------------------------ACTGTATTTTC---------------TTTTTTATTAACCA------------------------------------------------TTCATTG----------------------------------------------------------------------TTTC-TTGCGTT-------------------------------------------------------------CAACTTCTAACTGAG-T------------------CTTGT-------------------------------------T-T-T-CCCTC-CGACAGGTGATGAACCAGGACGTGAAGAAGGAGAACCCCTTGCAGTTCAGATTCCG
droTak1 scf7180000415843:164715-165036 - T-AATGCTGCACCACAA----CA-------------AA------------CAGACTGGATCAATGCCGTTTTCGACATGGGTAACACT-C-AGA---CAAGTGCACTTTC----------------------TATATTATTAATTTCT-----------------------AAATTATTATTTCTATATTAT--AA----ATAA--ATCAGG---------AACAA---ATAGTTGTT-----TAAATTACTGTACAAAATAA---ATTGTAT-------------------------------------------------------------------------------------------------------TAAATATAAAAGCTAAAAACAATACATATTATTTTCTCATTTTTAG------------------------TTGA--------------------------AGTGTATTTTT---------------A------------A------------------------------------------------ATTATTA-------------------------------------------------------------------TTTTTCT-TA--TTT---TAAT--------------------------------------------------------G--------------------------------CGAAT-------------------------------------T-T-TCCCCTT-AAACAGGTGATGAACCAGGACGTGAAGAAGGAGAACCCCTTGCAGTTCAGATTCCG
droEle1 scf7180000491006:2271694-2272020 - T-AATGCTGCACCACAA----CA-------------AA------------TAGACTGGATCAATGCCGTTTTCGACATGGGTAACACT-C-AGA---CAATTGCACTTTC----------------------TATATGTTTAT-----AA------------------------ATTTGATTAGTTTTTA---------------------GTTTGAAAAAAAA-A---ACAATTGTT-----TATTTCCG--TATAAAATGAAAAATTGTATTTTATGTTTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCCAATTACTTTCAACTAATTGAATTGAATAGTTAAGAAAAATCGTTTAACA-TTGTAG-------------------------T------AC------------------------------------TTTC---GTGTGAT-A---------------------------------------------------------AAACATCTAAAAG---G------------------CATGT-------------------------------------TTT-TTCTTTT-CGACAGGTGATGAACCAGGACGTGAAGAAGGAGAATCCCTTGCAGTTCAGATTCCG
droRho1 scf7180000779841:272952-273329 - A-AATGCTGCACCACAA----AA-------------AA----------CAAAGACTGGATCAATGCCGTTTTCGACATGGGTAAAACT-C-AGA---CAAATGCACTTCT----------------------AATATAATTAG-----AACTACGTATTTT--------------TA-GT---TCATATATT--TC----TTTA--ATTAGG---------AAA-AAGAATAATTTTT-----TATTTCCG--TATAAAATGAAAA--------TACAGTCGAGCTTTTTTTTTGGCTAAAATTCAATATTCGTAGAATTGAGTATTTCAAATTTAATTGTACATTTATTGAATTATAGTTGGTAAAG------------------------------------------------------------------------------TTGG--------------------------ACTGTAATTTAGA------------------------------------------------------------AAAAATCGTTCAAT---------------------------------------------------------------------------ATGTTCA-TAGTTTT---CAAT--------------------------------------------------------GCAT------------------------------ATA--------------------------------------T-T-TTCCTTT-TCACAGGTGATGAACCAGGACGTGAAGAAGGAGAACCCCTTGCAGTTCAGATTCCG
droFic1 scf7180000453829:744804-745186 - T-AATGCTGCACCACAA----CA-------------AA------------TAGACTGGATCAATGCCGTTTTCGACATGGGTAACACTTC-AGC---CAAAAGCACTTTT----------------------CAAATACCTAT-----AA------------------------TTATGATTATTATTTGTA--TATATGTTAACTTTCAAG---------AAA-C---TCAGTTGTT-----TAGTTGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAGAAATC--------------------------------------------------------------------------------------------------------------------TGA-GACAATCTAGATTATATTTTAAATATTTTAT------GTATTTTTGTTAATAATTTTCAATTCCGTTTAATTCTGTTCATTAGATTT---CATAGAATATATTAATCTTGATTATCAACAGCATTTTTGTTTACTTCTCCAAGATAAA--ACAACTAATAACATT------------------TATGT-------------------------------------T-C-CCCCTTT-CGACAGGTGATGAACCAGGACGTGAAGAAGGAGAACCCCTTGCAGTTCAGATTCCG
droKik1 scf7180000302441:5322-5435 - T-AATGCTGCACAACAA----CAATAAC--------AA------------CAGACTGGATCAATGCCGTTCTCGACATGGGTAACACT-TGAGACCACAAATGCACTAAA----------------------TA--TAA---------------------------ATATAAGATTA-GT---TTATTTATT--TA----T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13047:618514-618750 - T-ACTGCTGCACCCAAA----C--------------TA------------CAGACTGGATCAATGCCGTTTTCGACTTGGGTAACACT-C-AGC---TCCTCGCACCTTA----------------------GC-----------------------TACTTTCGTTT--ATGATTT-GT-----------T--T----------------------------------CC-------------------ATTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTCTTTATTTGGTTATAGTTTA------------------------------------------------------------------------------------------------------------------------A------GC------------------------------------GTC-----------------------------------------------------------------------AAT-------------TTGAGTGCGTATTCTAAC----------------------------TC--TG-CAGTGTCC-T-TTTCCCC-CCACAGGTGATGAACCAGGACGTGAAGAAGGAGAACCCCTTGCAGTTCAGATTCCG
droBip1 scf7180000396431:407238-407458 - T-AACGCTGCACTTGAA----C--------------AC------------CAGACTGGATCAATGCCGTTCTCGACTTGGGTAACACT-C-AGC----TCCTGCACCTTG----------------------TC-----------------------CTCT-------------TTCTGATTATTATTTG---------------------GC-----------------------TT-----TATTTTC---------------------------TGTCCAG--------------------------------------------------------------------------------------------------------------------------------------------------------TTCTGATATC--------------------------------------------------------------------------------------------------------------------CAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAGTACACAGTCTAAC----------------------------TC--TG-CAGTATCC-TTCTCCTTC-CCGCAGGTGATGAACCAGGACGTGAAGAAGGAGAACCCCTTGCAGTTCAGATTCCG
dp5 XL_group1e:8039418-8039630 - T-CATGCTGCTTAAAAA--AAAA-------------AC------------CAGACTGGATCAATGCCGTTTTCCACATGGGTAACGAG-AGAGT----CAATCCAT-------------------------CCATCCAT-----------C----------------CAT-----CCT-----ACAGATTCCCCCA----GT------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCGCAAGCCGTT--------------------------------------------CTGATCCGTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAATA-A------------------TATGCTT--------------------------CGT------T-T-TGGTTTG-TTGTAGGTCATGAATCAGGATGTCAAGAAGGAGAATCCATTGCAGTTCAGATTCCG
droPer2 scaffold_13:526082-526290 + T-CATGCTGCCTAAAA------A-------------AA------------AAGACTGGATCAATGCCGTTTTCCACATGGGTAACGAG-AGAGT----CAATCCAT-------------------------CCATCCAT-----------T----------------CTT-----CCT-----ACAGATTCCCCCA----GT------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCGCCAGCCGTT--------------------------------------------CTGATCCGTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAATG-A------------------TATGCTT--------------------------TGT------T-T-TGGTTTG-TTGTAGGTCATGAATCAGGATGTCAAGAAGGAGAATCCATTGCAATTCAGATTCCG
droWil2 scf2_1100000004963:986327-986593 + A-AATGCTGCACAAACAAAAACAATTA---------CA------------CAGACTGGATCAATGCCGTTTTCCACATGGGTAACAAC-TAAAAGCAGTCTCGCACATCATTTTTTATTATGTT---TAA--TT-----------------------GACTTTTATTT--AAAATGT-AG-----------T--T----------------------------------TT-------------------AGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATGGTTTTGTTTTTTCTAATATGTTT------------------------------------------------------------------------------------------------------------------------T------GC------------------------------------ATT-----------------------------------------------------------------------CGT-------------ATTATGGCTTATTTTAAT----------------------------TCATTT-TATTTTTG-G-TTTTCTC-GCACAGGTTATGAATCAGGATGTGAAAAAGGAGAATCCCTTGCAATTCAGATTCCG
droVir3 scaffold_12726:2618964-2619166 - dvi_2038 -------------------------------------A------------TAGACTGGATCAATGCCGTTCTCCACATGGGTAACCCA-----------ATTGGGCAATAT----------ATA--------AATTAAA-----------T---------------TT----------------------------------------------------------------------------------ATGTAGAAA-------------------------------------------------------------------------------------------------------------------------TATTTAATATG----------------------------------------------------------------------------------TAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------AAACATTTAAAAG---G------------------AATGCTTTTTAGCTACTTGTATATTAAT-----C-AAATAT-CAA-TCCGCTT-GTATAGGTTATGAATCAGGATGTGAAAAAGGAGAATCCCTTGCAATTCAGATTCCG
droMoj3 scaffold_6473:5871203-5871399 + ----------ACCAAAT----CG-------------CA------------CAGACTGGATCAATGCCGTTCTCAACATGGGTAACCCA-T-A--------ATGTGCCAAA----------------------------------------------------------------TAATATATGAAATATGTT--TA----ATGA--ATAAGA---------GAA-T---GCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATATTGCCTGTATATTAATCTATGT-TATTGT-C-A-TTCGTGT-GTTTAGGTCATGAATCAGGATGTGAAAAAGGAGAATCCGTTGCAATTCAGATTCCG
droGri2 scaffold_15203:6262278-6262489 - ---------CACAAAAA----TG-------------CA------------CAGACTGGATCAATGCCGTTCTCGACATGGGTAACCCA-----------ATTGGGCAATAT----------ATATCT--ATCTATATAT-----------T----------------TAT-----TTTG----AAGGATTTT--TA----AT------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGA---ATCATTT--------------------------------------------GTTATTTGTTGTTGTATACTAATA--------------------------------------------------------------------------------------------------------------------CAATTGTTG-------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------TGT-------------------------------------T-G-TTGTTGT-GTTTAGGTGATGAATCAGGATGTCAAAAAGGAGAATCCTTTGCAATTCAGATTCCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
T-AATGCTGCACTACAA----CA-------------AA------------CAGACTGGATCAATGCCGTTTTCGACATGGGTAACACT-C-AGA---CGCATGCACTTTC----------------------TA-----------------------------------TGAAATTATGTTTATTATTTAAT--TA----TTGAAAATCGGG---------AAA-A---ACAAACGTT-----TATTTTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATACAAATC--------------------------------------------------------------------------------------------------------------------CATTTGCAG-------------------------TTCGTAAAC------------------------------------TCT---ACCGTGTA-T---------------------------------------------------------TCGCATCTAATAGTG-A------------------CATGT-------------------------------------T-T-TTCCTTT-CCACAGGTGATGAACCAGGACGTGAAGAAGGAGAACCCCTTGCAGTTTAGGTTCCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCAGGACGTGAAGAA...........................2113.00300210000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCAGGACGTGAAGAAGGA........................2412.00200000000000101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCAGGACGTGAAGAAGGAGA......................2612.00200200000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACGTGAAGAAGGAGAACC...................2111.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACCAGGACGTGAAGAAGGG........................2311.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGGACGTGAAGAAGGA........................2111.00100000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGAACCAGGACGTGAAGAAGGA........................2611.00100010000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGAAGAAGGAGAACCCCC................2011.00100100000000000000
..............................................................................................................................................................................................................................AA-A---ACAAACGTT-----TATTTTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACGTGAAGAAGGAGAACCC..................2211.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGGACGTGAAGAAGGAGAACCCCT................2911.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGGACGTGAAGAAGGAGAACCCC.................2811.00100000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGGACGTGAAGAAGGAGAACC...................2611.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGGACGTGAAGAAGGAGA......................2011.00101000000000000000
.........................................................................................C-AGA---CGCATGCACTTTC----------------------T......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------------------------TCGCATCTAATAGTG-A------------------CATGT-------------------------------------T-T-TT..............................................................2611.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAGGACGTGAAGAAGGAGAACCC..................2611.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAGAAGGAGAACCCC.................1811.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGATGAACCAGGACGTGAA..............................2211.00100000010000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACCAGGACGTGAAGAAGGAGAACCC..................2811.00100000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGACGTGAAGAAGGAGAACCCCT................2711.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAGGAGAACCCCTTGCAGTTTAGG.....2811.00100010000000000000
droSec2
T-AATGCTGCACCACAA----CA-------------AA------------CAGACTGGATCAATGCCGTTTTCGACATGGGTAACACA-C-AGA---CGCATGCACTTTC----------------------TA-----------------------------------TGAAATTATGTTTATTATTTAAT--TA----TTGA--ATCGGG---------AAA-A---CCAAACGTT-----TAATTTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATACAAAAC--------------------------------------------------------------------------------------------------------------------CATTTGCAG-------------------------TTCGTAAAC------------------------------------TCT---ACCGTGTA-T---------------------------------------------------------TCGCATCTAATAGAT-A------------------AATGT-------------------------------------T-T-ATCCTTT-TCTTAGGTGATGAACCAGGACGTGAAGAAGGAGAACCCCTTGCAGTTTAGGTTCCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCAGGACGTGAAGAAGGA........................2417.0070160
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCAGGACGTGAAGAAGGAG.......................2512.0020110
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACGTGAAGAAGGAGAACCCCTTGCA............2711.0010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGGACGTGAAGAAGGA........................2111.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCAGGACGTGAAGAAGGAGA......................2611.0011000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCAGGACGTGAAGAA...........................2111.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGAAGAAGGAGAACCCCTTGCA............2411.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGAACCAGGACGTGAAGAAGGA........................2611.0010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGGACGTGAAGAAGGAG.......................2211.0010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGGACGTGAAGAAGGAGA......................2311.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCAGGACGTGAAG.............................1911.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGAACCAGGACGTGAAGAA...........................2311.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGACGTGAAGAAGGAGAACCCCTT...............2811.0010001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGACGTGAAGAAGGA........................1911.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGATGAACCAGGACGTGAAGA............................2411.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAACCCCTTGCAGTTTAGGTT...2411.0010010
dm3
T-AATGCTGCACCACAA-CAACA-------------AA------------CAGACTGGATCAATGCCGTTTTCGACATGGGTAACACT-C-AGACGCCGCATGCACTTTT----------------------T---TAT---------------------------CTATGATATTATGTTTATTATTTCAT--TA----TTGA--ATCGGG---------AAA-A---CCAAACGTTTTTTTTTTTTTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATACAAATC--------------------------------------------------------------------------------------------------------------------CATTTGCAG-------------------------TTTGTAAAC------------------------------------TTT---AGCGTGCA-T---------------------------------------------------------TCGCATCTAATAGTG-A------------------TATGT-------------------------------------T-T-TCGCTTT-TCACAGGTGATGAACCAGGACGTGAAGAAGGAGAATCCCTTGCAGTTTAGGTTCCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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......................................................................................................................................................................CTATGATATTATGTTTATTATTTCAT--.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGGACGTGAAGAAGG.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAC------------------------------------TTT---AGCGTGCA-T---------------------------------------------------------TCGC.............................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAGGACGTGAAGAAGGAGA......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGAACCAGGACGTGAAGAAGGA........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGACGTGAAGAAGGAGAATCCCTT...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAGGACGTGAAGAAGGAGAATCCCT................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
......................................................................................................................................................................................ATTATTTCAT--TA----TTGA--ATCGGG---------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCAGGACGTGAAGAAGGAGAA.....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGAACCAGGACGTGAAGAAGG.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGACGTGAAGAAGGAGAATCCCTTGC.............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTGAAGAAGGAGAATCCCTT...............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGGACGTGAAGAAGGAG.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGGACGTGAAGAAGGAGAA.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAGAATCCCTTGCAGTTTAGG.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAGGAGAATCCCTTGCAGTTTAGG.....2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGAATCCCTTGCAGTTTAGGTTCC.2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGATGAACCAGGACG..................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACGTGAAGAAGGAGAATCCCTT...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTTGCAGTTTAGGTTT..1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACCAGGACGTGAAGAA...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGGAGAATCCCTTGCAGC..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCAGGACGTGAAG.............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TTTTTTTTTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATACAAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGACGTGAAGAAT..........................1540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGAAGAAGGAGAATTTT.................20170.1220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000000000000000000000
droEre2
T-AATGCTGCACCACAA----CA-------------AA------------CAGACTGGATCAATGCCGTTTTCGACATGGGTAACACT-C-AGA---CGAATGCACTTTC----------------------GA-------------------------------------------TGTTTATTATTTATT--TA----TCGA--ATCAGG---------AAA-A---CCAATTGTT-----TATTTTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTACAAATC--------------------------------------------------------------------------------------------------------------------CATTTGCAG-------------------------TTTATAAAC------------------------------------TCT---CCTGCTTAGC---------------------------------------------------------CTCCATCTAATAGAG-A------------------AATGT-------------------------------------T-T-TGCCTTT-GCACAGGTGATGAACCAGGACGTGAAGAAGGAGAACCCCTTGCAGTTTAGATTCCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCAGGACGTGAAGAAGGA........................2414.0040000310
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGGACGTGAAGAAGGA........................2114.0040000400
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGACGTGAAGAAGGA........................1913.0030000300
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGGACGTGAAGAAG..........................1912.0020000200
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAGGACGTGAAGAAGGA........................2012.0020000020
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACCAGGACGTGAAGAAGGA........................2312.0020000200
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGGACGTGAAGAAGGA........................1812.0020001010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGGACGTGAAGAA...........................1812.0021001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGAAGAAGGAGAACCCCTTGCAGC..........2711.0010100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGAACCAGGACGTGAAGAAGGA........................2511.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACGTGAAGAAGGAGA......................1811.0010001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAGGAGAACCCCTTGC.............2011.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAGGAGAACCCCTT...............1811.0011000000
...................................................................................................AATGCACTTTC----------------------GA-------------------------------------------TGTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGAAGAAGGAGAACCCCTTGCAGT..........2711.0010000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGAACCAGGACGTGAAGAA...........................2311.0010001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGGACGTGAAGAAGG.........................2011.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGAAGAAGGAGAACCCCTTGCA............2411.0010000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATAAAC------------------------------------TCT---CCTGCTTAGC---------------------------------------------------------.................................................................................................................................................2211.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCAGGACGTGAAGAA...........................2111.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAGGACGTGAAGAAGG.........................1911.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGGACGTGAAGAAGGAGAA.....................2411.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATGAACCAGGACGTGAAGAAGG.........................2611.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTGAAGAAGGAGAACC...................1911.0010000010
droYak3
T-AATGCTGCACCACAA----CA-------------AA------------CAGACTGGATCAATGCCGTTCTCGACATGGGTAACACT-C-AGA---CGAATGCACTTTG----------------------A----AA---------------------------TTATGATATTATGTTTATTATTTATT--TA----TCGA--ATCAGG---------AAAAA---CCAATTGTT-----TATTTCCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTACAAATC--------------------------------------------------------------------------------------------------------------------CATTTGCAG-------------------------TTTATAAAC------------------------------------TTTC--ATTGCAAT-T---------------------------------------------------------CCGCATCTAATAGAG-A------------------CATGT-------------------------------------T-T-TCGCTAT-CCACAGGTGATGAACCAGGATGTGAAGAAGGAGAACCCCTTGCAGTTTAGATTCCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATGTGAAGAAGGAGAACCCCTTGC.............2714.00400000040000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGAAGAAGGAGAACCCCTTGC.............2514.00400000040000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCAGGATGTGAAGAAG..........................2213.00301000020000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGGAGAACCCCTTGCA............1913.00302010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCAGGATGTGAAGAAGGA........................2413.00300100020000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAGGAGAACCCCTTGC.............2012.00202000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGGATGTGAAGAAG..........................1912.00200000020000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGGATGTGAAGAAGGA........................2112.00200000020000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCAGGATGTGAAGA............................2012.00200000020000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGAACCAGGATGTGAAGAAG..........................2411.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCAGGATGTGAAGAAGGAG.......................2511.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGGATGTGAAGAAGGAGA......................2011.00100000010000
................................................................GCCGTTCTCGACATGGGTAACAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGATGAACCAGGATGTGAAGAAGGA........................2811.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGGATGTGAAGAAGGAGAAC....................2511.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAGAAGGAGAACCCCTTGC.............2211.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCAGGATGTGAAG.............................1911.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGTGAAGAAGGAGAACCCCTTGCA............2711.00100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACCCCTTGCAGTTTAGA.....2011.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGAAGAAGGAGAACCCCTTGCA............2611.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCAGGATGTGAAGAAGGAGAA.....................2711.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGGATGTGAAGAAGG.........................2011.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGATGAACCAGGATGTGAAGAAG..........................2611.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAGGATGTGAAGAAGGA........................2011.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGAACCAGGATGTGAAG.............................2111.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGGATGTGAAGAAGGAGAACCCCTTGC.............2911.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAAGAAGGAGAACCCCT................2011.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAGGAGAACCCCTTGCA............2011.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGTGAAGAAGGAGAACCCCTTGC.............2611.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCAGGATGTGAAGAA...........................2111.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAGAAGGAGAACCCCT................1911.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCAGGATGTGAAGAAGG.........................2311.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGAAGAAGGAGAACCCCT................2211.00100000010000
....................................................................................................................................................................................TTATTATTTATT--TA----TCGA--ATCAGG---------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
droEug1
TTAATGCTGCACCACAT----GAAAAAAAACAAACAAATGTATAAAAATCTAGACTGGATCAATGCCGTTTTCGACATGGGTAACACT-C-AGA---AAATTGCACTAAA----------------------TT-------------------TGTATTTT------TAA-----TTTG----------------A----TTTA--ATCTGG---------AAA-AAT-CCAATT---------------------------AAAT--------TATAGACCAGCTTCTCTATTAAC-------------------------------------------------------------------GAAG------------------------------------------------------------------------------TTCG--------------------------TCTGTAATCTAAAAACCAAAATTCTATATTATATCAAAAA----------------------------------------------------------------------------------------T------------------------------------TCT---CTATTAAAAC---------------------------------------------------------ATCTACTAAAAAG---G------------------TAAAT-------------------------------------C-T-TCCCTTTCGTATAGGTGATGAACCAGGACGTTAAGAAGGAGAACCCCTTGCAGTTCAGATTCCGSizeHit CountTotal NormTotal
No Reads
droBia1
T-AATGCTGCACCACAA----CA-------------AA------------AAGACTGGATCAATGCCGTTCTCGACTTGGGTAACACT-C-AGC---C-AATGCACTCTA--------------------CCTATATAA-----------------------------------TTATGATTTT----------CA----TCAG--ATCTGT---------AAA-A---TTGTATTTT-----TGAATTTGTGTACAATAT---------------------------------------------------------------------------------------------------------------TGATTTAATATTCAATCTGATA----TACTTATAGTG--ATTGGTTTTGG------------------------TTTG--------------------------ACTGTATTTTC---------------TTTTTTATTAACCA------------------------------------------------TTCATTG----------------------------------------------------------------------TTTC-TTGCGTT-------------------------------------------------------------CAACTTCTAACTGAG-T------------------CTTGT-------------------------------------T-T-T-CCCTC-CGACAGGTGATGAACCAGGACGTGAAGAAGGAGAACCCCTTGCAGTTCAGATTCCGSizeHit CountTotal NormTotal
No Reads
droTak1
T-AATGCTGCACCACAA----CA-------------AA------------CAGACTGGATCAATGCCGTTTTCGACATGGGTAACACT-C-AGA---CAAGTGCACTTTC----------------------TATATTATTAATTTCT-----------------------AAATTATTATTTCTATATTAT--AA----ATAA--ATCAGG---------AACAA---ATAGTTGTT-----TAAATTACTGTACAAAATAA---ATTGTAT-------------------------------------------------------------------------------------------------------TAAATATAAAAGCTAAAAACAATACATATTATTTTCTCATTTTTAG------------------------TTGA--------------------------AGTGTATTTTT---------------A------------A------------------------------------------------ATTATTA-------------------------------------------------------------------TTTTTCT-TA--TTT---TAAT--------------------------------------------------------G--------------------------------CGAAT-------------------------------------T-T-TCCCCTT-AAACAGGTGATGAACCAGGACGTGAAGAAGGAGAACCCCTTGCAGTTCAGATTCCGSizeHit CountTotal NormTotal
No Reads
droEle1
T-AATGCTGCACCACAA----CA-------------AA------------TAGACTGGATCAATGCCGTTTTCGACATGGGTAACACT-C-AGA---CAATTGCACTTTC----------------------TATATGTTTAT-----AA------------------------ATTTGATTAGTTTTTA---------------------GTTTGAAAAAAAA-A---ACAATTGTT-----TATTTCCG--TATAAAATGAAAAATTGTATTTTATGTTTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCCAATTACTTTCAACTAATTGAATTGAATAGTTAAGAAAAATCGTTTAACA-TTGTAG-------------------------T------AC------------------------------------TTTC---GTGTGAT-A---------------------------------------------------------AAACATCTAAAAG---G------------------CATGT-------------------------------------TTT-TTCTTTT-CGACAGGTGATGAACCAGGACGTGAAGAAGGAGAATCCCTTGCAGTTCAGATTCCGSizeHit CountTotal NormTotal
No Reads
droRho1
A-AATGCTGCACCACAA----AA-------------AA----------CAAAGACTGGATCAATGCCGTTTTCGACATGGGTAAAACT-C-AGA---CAAATGCACTTCT----------------------AATATAATTAG-----AACTACGTATTTT--------------TA-GT---TCATATATT--TC----TTTA--ATTAGG---------AAA-AAGAATAATTTTT-----TATTTCCG--TATAAAATGAAAA--------TACAGTCGAGCTTTTTTTTTGGCTAAAATTCAATATTCGTAGAATTGAGTATTTCAAATTTAATTGTACATTTATTGAATTATAGTTGGTAAAG------------------------------------------------------------------------------TTGG--------------------------ACTGTAATTTAGA------------------------------------------------------------AAAAATCGTTCAAT---------------------------------------------------------------------------ATGTTCA-TAGTTTT---CAAT--------------------------------------------------------GCAT------------------------------ATA--------------------------------------T-T-TTCCTTT-TCACAGGTGATGAACCAGGACGTGAAGAAGGAGAACCCCTTGCAGTTCAGATTCCGSizeHit CountTotal NormTotal
No Reads
droFic1
T-AATGCTGCACCACAA----CA-------------AA------------TAGACTGGATCAATGCCGTTTTCGACATGGGTAACACTTC-AGC---CAAAAGCACTTTT----------------------CAAATACCTAT-----AA------------------------TTATGATTATTATTTGTA--TATATGTTAACTTTCAAG---------AAA-C---TCAGTTGTT-----TAGTTGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAGAAATC--------------------------------------------------------------------------------------------------------------------TGA-GACAATCTAGATTATATTTTAAATATTTTAT------GTATTTTTGTTAATAATTTTCAATTCCGTTTAATTCTGTTCATTAGATTT---CATAGAATATATTAATCTTGATTATCAACAGCATTTTTGTTTACTTCTCCAAGATAAA--ACAACTAATAACATT------------------TATGT-------------------------------------T-C-CCCCTTT-CGACAGGTGATGAACCAGGACGTGAAGAAGGAGAACCCCTTGCAGTTCAGATTCCGSizeHit CountTotal NormTotal
No Reads
droKik1
T-AATGCTGCACAACAA----CAATAAC--------AA------------CAGACTGGATCAATGCCGTTCTCGACATGGGTAACACT-TGAGACCACAAATGCACTAAA----------------------TA--TAA---------------------------ATATAAGATTA-GT---TTATTTATT--TA----T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
T-ACTGCTGCACCCAAA----C--------------TA------------CAGACTGGATCAATGCCGTTTTCGACTTGGGTAACACT-C-AGC---TCCTCGCACCTTA----------------------GC-----------------------TACTTTCGTTT--ATGATTT-GT-----------T--T----------------------------------CC-------------------ATTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTCTTTATTTGGTTATAGTTTA------------------------------------------------------------------------------------------------------------------------A------GC------------------------------------GTC-----------------------------------------------------------------------AAT-------------TTGAGTGCGTATTCTAAC----------------------------TC--TG-CAGTGTCC-T-TTTCCCC-CCACAGGTGATGAACCAGGACGTGAAGAAGGAGAACCCCTTGCAGTTCAGATTCCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAGGACGTGAAGAAGGA........................2013.003110010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACGTGAAGAAGGAGA......................1812.002010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTGAAGAAGGAGAACCCCTTGC.............2511.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAACCCCTTGCAGTT.........1811.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACGTGAAGAAGGAGAACCCCTT...............2411.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCAGGACGTGAAGAA...........................2111.001001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTGAAGAAGGAGAACCCCTTGCA............2611.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGGACGTGAAGAAGGA........................2111.001001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC----------------------------TC--TG-CAGTGTCC-T-TTTCCCC-CCA.....................................................2611.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACCAGGACGTGAAGAAGGAGA......................2511.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACCAGGACGTGAAGA............................1911.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTCC-T-TTTCCCC-CCACAG..................................................2111.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCAGGACGTGAAGAAGGAGAACC...................2611.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGGAGAACCCCTTGCAGTTCAGA.....2611.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAGAAGGAGAACCCCT................1911.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCAGGACGTGAAGAAGG.........................2311.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGAACCAGGACGTGAAGAAGGA........................2611.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAGAACCCCTTGCAGT..........1911.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAGGACGTGAAGAAGGAGA......................2211.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTGAAGAAGGAGAACCCCC................2211.001010000
droBip1
T-AACGCTGCACTTGAA----C--------------AC------------CAGACTGGATCAATGCCGTTCTCGACTTGGGTAACACT-C-AGC----TCCTGCACCTTG----------------------TC-----------------------CTCT-------------TTCTGATTATTATTTG---------------------GC-----------------------TT-----TATTTTC---------------------------TGTCCAG--------------------------------------------------------------------------------------------------------------------------------------------------------TTCTGATATC--------------------------------------------------------------------------------------------------------------------CAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAGTACACAGTCTAAC----------------------------TC--TG-CAGTATCC-TTCTCCTTC-CCGCAGGTGATGAACCAGGACGTGAAGAAGGAGAACCCCTTGCAGTTCAGATTCCGSizeHit CountTotal NormTotal
No Reads
dp5
T-CATGCTGCTTAAAAA--AAAA-------------AC------------CAGACTGGATCAATGCCGTTTTCCACATGGGTAACGAG-AGAGT----CAATCCAT-------------------------CCATCCAT-----------C----------------CAT-----CCT-----ACAGATTCCCCCA----GT------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCGCAAGCCGTT--------------------------------------------CTGATCCGTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAATA-A------------------TATGCTT--------------------------CGT------T-T-TGGTTTG-TTGTAGGTCATGAATCAGGATGTCAAGAAGGAGAATCCATTGCAGTTCAGATTCCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAATCAGGATGTCAAGAAGGA........................2315.0050400000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAATCAGGATGTCAAGAAGGA........................2414.0040300000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGATGTCAAGAAGGAGA......................1913.0030200000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAATCAGGATGTCAAGAAGGAGAAT....................2712.0020100000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAATCAGGATGTCAAGAAGGAGA......................2612.0020010000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCATGAATCAGGATGTCAA..............................2112.0020200000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGATGTCAAGAAGGA........................1912.0020200000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCATTGCAGTTCAGATTCC.2111.0010000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCCATTGCAGTTCAGATTCC.2311.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCCATTGCAGTTCAGAT....2011.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATGAATCAGGATGTCAAGAAGGA........................2611.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAATCAGGATGTCAAGAAG..........................2111.0010010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAATCCATTGCAGTTCAG......2111.0010000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAGAATCCATTGCAGTTCAGAT....2511.0010010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAATCAGGATGTCAAGAAGG.........................2211.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAATCAGGATGTCAAGAAGGAG.......................2411.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGATGTCAAGAAGGAGAATC...................2411.0010000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAATCAGGATGTCAAGAAGGAGA......................2511.0010000000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGATGTCAAGAAGGAGA......................2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATCAGGATGTCAAGAAGGAGA......................2411.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCAGGATGTCAAGAAGGA........................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGATGTCAAGAAGGAGAATCCATTGC.............2811.0010000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGATGTCAAGAAGGAGA......................2111.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCCATTGCAGTTCAGATT...2111.0010100000000
droPer2
T-CATGCTGCCTAAAA------A-------------AA------------AAGACTGGATCAATGCCGTTTTCCACATGGGTAACGAG-AGAGT----CAATCCAT-------------------------CCATCCAT-----------T----------------CTT-----CCT-----ACAGATTCCCCCA----GT------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCGCCAGCCGTT--------------------------------------------CTGATCCGTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAATG-A------------------TATGCTT--------------------------TGT------T-T-TGGTTTG-TTGTAGGTCATGAATCAGGATGTCAAGAAGGAGAATCCATTGCAATTCAGATTCCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGATGTCAAGAAGGAGA......................2114.004400000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATGAATCAGGATGTC................................1814.004400000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCATTGCAATTCAGAT....1811.001001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAATCAGGATGTCAAGAAGGAGA......................2511.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAGGATGTCAAGAAGGAGA......................2211.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCAGGATGTCAAGAAGG.........................2011.001001000
.............AAA------A-------------AA------------AAGACTGGATCAATGCCGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGATGTCAAGAAGGAGAATCC..................2511.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGATGTCAAGAAGGAGAATC...................2211.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGATGTCAAGAAGGAGA......................2011.001001000
......................................................................TTCCACATGGGTAACGAG-AGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTCATGAATCAGGATGTCAAGAA...........................2511.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAGGATGTCAAGAAGGA........................2011.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAATCAGGATGTCAAGAAGGAGG......................2511.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCAGGATGTCAAGAAGGAGAATC...................2611.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGATGTCAAGAAGGAGA......................1911.001010000
droWil2
A-AATGCTGCACAAACAAAAACAATTA---------CA------------CAGACTGGATCAATGCCGTTTTCCACATGGGTAACAAC-TAAAAGCAGTCTCGCACATCATTTTTTATTATGTT---TAA--TT-----------------------GACTTTTATTT--AAAATGT-AG-----------T--T----------------------------------TT-------------------AGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATGGTTTTGTTTTTTCTAATATGTTT------------------------------------------------------------------------------------------------------------------------T------GC------------------------------------ATT-----------------------------------------------------------------------CGT-------------ATTATGGCTTATTTTAAT----------------------------TCATTT-TATTTTTG-G-TTTTCTC-GCACAGGTTATGAATCAGGATGTGAAAAAGGAGAATCCCTTGCAATTCAGATTCCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGATGTGAAAAAGG.........................1812.00200020
.........................TA---------CA------------CAGACTGGATCAATGCCGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAAAAGGAGAATCCCTTGCA............2311.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAATCAGGATGTGAAAAAGGA........................2311.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTG-G-TTTTCTC-GCACA...................................................2011.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGATGTGAAAAAGGAGAATCCCTTGC.............2811.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAATCAGGATGTGAAAAA...........................2111.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGAAAAAGGAGAATCCC.................2111.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAATCAGGATGTGAAAAAGGAGA......................2511.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGAAAAAGGAGAATCCC.................2011.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGAATCAGGATGTGAAAAAGG.........................2511.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGATGTGAAAAAGGAGAATCCCT................2511.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAGGATGTGAAAAAG..........................1811.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTATGAATCAGGATGTGAAAAAGG.........................2611.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGATGTGAAAAAGGAGAATCCC.................2411.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGATGTGAAAAAGGAGAATC...................2211.00110000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGATGTGAAAAAGGAGA......................2111.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAAAAAGGAGAATCCC.................1911.00101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTATGAATCAGGATGTGA...............................2011.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGAATCAGGATGTGAAAAA...........................2311.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGATGTGAAAAAGGAGAATCCCT................2611.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGAAAAAGGAGAATCCCT................2111.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGATGTGAAAAAGGAGA......................2011.00100010
droVir3
-------------------------------------A------------TAGACTGGATCAATGCCGTTCTCCACATGGGTAACCCA-----------ATTGGGCAATAT----------ATA--------AATTAAA-----------T---------------TT----------------------------------------------------------------------------------ATGTAGAAA-------------------------------------------------------------------------------------------------------------------------TATTTAATATG----------------------------------------------------------------------------------TAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------AAACATTTAAAAG---G------------------AATGCTTTTTAGCTACTTGTATATTAAT-----C-AAATAT-CAA-TCCGCTT-GTATAGGTTATGAATCAGGATGTGAAAAAGGAGAATCCCTTGCAATTCAGATTCCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAATCAGGATGTGAAAAAGGA........................2411.001000000000000100000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCTTGCAATTCAGATTCCG2211.001000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGATGTGAAAAAGGAGA......................1911.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAATCAGGATGTGAAAAAGGAG.......................2411.001000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTATGAATCAGGATGTGA...............................2111.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGAAAAAGGAGAATCCCTTGC.............2511.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAT-CAA-TCCGCTT-GTATAG..................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGAAAAAGGAGAATCCC.................2111.001000000000000010000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGAATCAGGATGTGA...............................1911.001000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAATCCCTTGCAATTCAG......2111.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATCAGGATGTGAAAAAGG.........................2111.001000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAAAAGGAGAATCCCTTGC.............2211.001000000000000000000010000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTATGAATCAGGATGT.................................1811.001000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAGAATCCCTTGCAAT..........1911.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGATGTGAAAAAGGAG.......................1911.001000000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGATGTGAAAAAGGAGAATC...................2211.001000000000000000000000000000000000000000000000000000000000001000
droMoj3
----------ACCAAAT----CG-------------CA------------CAGACTGGATCAATGCCGTTCTCAACATGGGTAACCCA-T-A--------ATGTGCCAAA----------------------------------------------------------------TAATATATGAAATATGTT--TA----ATGA--ATAAGA---------GAA-T---GCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATATTGCCTGTATATTAATCTATGT-TATTGT-C-A-TTCGTGT-GTTTAGGTCATGAATCAGGATGTGAAAAAGGAGAATCCGTTGCAATTCAGATTCCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAATCAGGATGTGAAAAAGGAGA......................2512.002100001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGATGTGAAAAAGGAGA......................1912.002100001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAGGATGTGAAAAAGG.........................1911.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGTTGCAATTCAGAT....1811.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATGAATCAGGATGTGAAAAAGGA........................2611.001000001
......................G-------------CA------------CAGACTGGATCAATGCCGTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGAATCCGTTGCAATT.........1911.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAATCAGGATGTGAAAAAGGA........................2411.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATGAATCAGGATGTGAAAAAGGAGA......................2811.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCATGAATCAGGATGTGA...............................2011.001100000
...........................................................................................................................................................................................................A--ATAAGA---------GAA-T---GCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATATTG...............................................................................................2311.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCCGTTGCAATTCAGA.....1911.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATGAATCAGGATGTGA...............................1911.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGAATCAGGATGTGAAAAAGGAGA......................2711.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGAATCCGTTGCAATTCAGA.....2311.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAGAATCCGTTGCAATTCAGATT...2611.001100000
droGri2
---------CACAAAAA----TG-------------CA------------CAGACTGGATCAATGCCGTTCTCGACATGGGTAACCCA-----------ATTGGGCAATAT----------ATATCT--ATCTATATAT-----------T----------------TAT-----TTTG----AAGGATTTT--TA----AT------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGA---ATCATTT--------------------------------------------GTTATTTGTTGTTGTATACTAATA--------------------------------------------------------------------------------------------------------------------CAATTGTTG-------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------TGT-------------------------------------T-G-TTGTTGT-GTTTAGGTGATGAATCAGGATGTCAAAAAGGAGAATCCTTTGCAATTCAGATTCCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGAATCAGGATGTCAAAAAGG.........................2411.00101

Generated: 05/18/2015 at 02:05 PM