ID:

dsi_9851

 Coordinate:

node_90918:6614-6763 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.3 -12.1

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

TTATAAATGAATTTTTTATTTGTGCCAAAACAGCTGAGAAAACGACAAATGTAAGTTTTAAAGTTTATTTTTCTATAAGGTGGTGTTGAACTCCTATTGCCTTATAATTAATTATTGCTTAAACACACGGCTTTATTAAAAAATTAAAACAATAAAAAATACCGATAAAGAACCAGACAAGAAAACTATGATTTGATTTCATATTAATTCAAATATACTAATTATAACCGTTACTTGTGGAGGAAAAGGG
*****************************************************************.((((((..(((((((.((((............((..((........))..))......)))).)))))))..))))))...........................................*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 M024
male body
......................TGCCAAAACAGCTGAGAAAACGACAA.......................................................................................................................................................................................................... 26 0 1 3.00 3 3 0 0 0 0 0 0 0 0
......................TGCCAAAACAGCTGAGAAAACGACAAA......................................................................................................................................................................................................... 27 0 1 2.00 2 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................................TAAAGAACCAGACAAGAAAACT............................................................... 22 0 1 2.00 2 0 0 0 2 0 0 0 0 0
....................TGTGCCAAAACAGCTGAGAAAACGACAA.......................................................................................................................................................................................................... 28 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.............................................................AGTTTATTTTTCTATAAGGTGGTA..................................................................................................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.................................................................TATTTTTCTATAAGGTGGTGTTGAACTC............................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................................................ATTTTATTTTTCTATAAGGTGGT...................................................................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................AAACAGCTGAGAAAACGACAAATC....................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0
......................TGCCAAAACAGCTGAGAAAACGACAAATC....................................................................................................................................................................................................... 29 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................CAAAACAGCTGAGAAAACGACAAATCAC..................................................................................................................................................................................................... 28 3 1 1.00 1 0 0 0 0 1 0 0 0 0
..........................AAAACAGCTGAGAAAACGACAAATCA...................................................................................................................................................................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................AAACAGCTGAGAAAACGAC............................................................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0
......................TGCCAAAACAGCTGAGAAAACGA............................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................AGTTTATTTTTCTATAAGGTGGA...................................................................................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0
............................AACAGCTGAGAAAACGACAAATCAC..................................................................................................................................................................................................... 25 3 1 1.00 1 0 0 0 0 1 0 0 0 0
.......................GCCAAAACAGCTGAGAAAACGACAAATCAC..................................................................................................................................................................................................... 30 3 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TACCCGTTACTTGTGGAGGAAAAGGG 26 1 2 0.50 1 0 0 0 0 0 1 0 0 0
......................................................................................TGAAGTCCTATTGCCTCATTAT.............................................................................................................................................. 22 3 2 0.50 1 0 0 0 0 0 0 1 0 0
.....CAAGAATTTTTTATTGGTGCCA............................................................................................................................................................................................................................... 22 3 7 0.29 2 0 0 2 0 0 0 0 0 0
......................................................................................................................................................................TAAGAACCAGACAAGAAAA................................................................. 19 1 4 0.25 1 0 0 0 0 0 0 0 1 0
.....CAAGAATTTTTTATTGGTGCCAA.............................................................................................................................................................................................................................. 23 3 5 0.20 1 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................TAAGAACCAGACAAGAAAAA................................................................ 20 2 7 0.14 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................................AAAAATTAACACAATAAA.............................................................................................. 18 1 14 0.07 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................AACAGTAAAAGATACCGAC.................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GTTAGTTGGGGAGGTAAAG.. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

AATATTTACTTAAAAAATAAACACGGTTTTGTCGACTCTTTTGCTGTTTACATTCAAAATTTCAAATAAAAAGATATTCCACCACAACTTGAGGATAACGGAATATTAATTAATAACGAATTTGTGTGCCGAAATAATTTTTTAATTTTGTTATTTTTTATGGCTATTTCTTGGTCTGTTCTTTTGATACTAAACTAAAGTATAATTAAGTTTATATGATTAATATTGGCAATGAACACCTCCTTTTCCC
***************************************************************.((((((..(((((((.((((............((..((........))..))......)))).)))))))..))))))...........................................***************************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM343915
embryo
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
...................................................................................................................................AAATAATTTGTTAATTTTG.................................................................................................... 19 1 8 0.63 5 0 3 1 1 0 0 0
..........................................................................................................................................................................TTGGTCAGTTTTTTTGATACTAT......................................................... 23 3 4 0.50 2 2 0 0 0 0 0 0
.....................................................................................................................................ATAATTTGTTAATTTTG.................................................................................................... 17 1 20 0.40 8 0 0 2 4 0 1 1
......................................................................................................................................TAATTTGTTAATTTTG.................................................................................................... 16 1 20 0.30 6 0 0 3 1 2 0 0
.....................................CTTTTGGTGTTAACATTCA.................................................................................................................................................................................................. 19 2 5 0.20 1 1 0 0 0 0 0 0
....................................................................................................................................AATAATTTGTTAATTTTG.................................................................................................... 18 1 17 0.12 2 0 1 0 0 0 1 0
..................................................................................................................................................................GCCATTTCTGGGTCTG........................................................................ 16 2 20 0.05 1 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 node_90918:6564-6813 - dsi_9851 TTATAAATGAATTT-TTTAT-TTGTGC---CAA-AACAGCTGA--GAAAACG----A-CA-----------A-----------------------------------------------------ATGTAAGTTTT-----------AAAGTTTATTTTTCTATAAGG---------------------------------------------------------------------TGGTGTTGAACTCCTATTG-----------------------------------------------CCTTATAATTAATTA-----------TTGCTTAAACACACGGCTTTA-----------TTAAAAAA-TTAAAACAATAAA------------------------------------------------------------------------------------------------AAATACCG--------------ATAAAGAACCAGACAAGAAA------------------------------------------------------------------------------------------------------------------------------------------------ACTATGATTTG------------------------ATTTCAT-----------------------------------------ATTAATTC----AAA-TATACTAATTATA-------ACCGTTACTTGT--GGAGGAAAAGGG
droSec2 scaffold_93:50338-50597 + TTATAAATGAATTT-TTTAT-TTGTGC---CAA-AACAGCTGA--GAAAACC----A-CA-----------A-----------------------------------------------------ATGTAAGTTTT-----------AAAGTTTAATTTTCTATAAGG---------------------------------------------------------------------TGGTGTTGAACTCCTATTG-----------------------------------------------CCTTATAATTAATAA-AAAAGAAAACTTGCTTAAACACACAGCTTTA-----------TTAAAAAA-TTAAAACAATAAA------------------------------------------------------------------------------------------------AAATACCG--------------ATAAAGAACCAGACAAGAAA------------------------------------------------------------------------------------------------------------------------------------------------ACTATGATTTG------------------------ATTTCAT-----------------------------------------ATTTATTC----AAA-TATACTAATTATA-------CCCGTTACTTGT--GGAGTAAACGCC
dm3 chr2RHet:3174501-3174759 - TTATAAATGAATTT-TTTAT-TTGTGC---CAA-AACAGCTGA--GAAAACG----A-CA-----------A-----------------------------------------------------ATGTAAGTTTT-----------TAAGTTTATTTTTCTATAAGG---------------------------------------------------------------------TGGTGTAGAACTCCTATTG-----------------------------------------------CCTTATATTTAATAA-AAAAGAAAGCTAGCTTATACACACGCCTTAA-----------TTAAACAA-TTAAAATAATAAA------------------------------------------------------------------------------------------------ATATACCG--------------AAGAAGAACAAAACAAGAAA------------------------------------------------------------------------------------------------------------------------------------------------ACTATGATTTG------------------------ATTTCTT-----------------------------------------ATTAATTC----AAA-TATAATAATTATA-------CCAGTTGCTTAA--AAAGTAG-AAGG
droEre2 scaffold_4929:25132405-25132594 - TTATAAATGAATTT-TTTAT-TTGTGC---CAA-AACAGCTGA--GAAAACA----A-CA-----------A-----------------------------------------------------ATGTAAGTTTT-----------TAAGTTTATTTTTCTATAAGG---------------------------------------------------------------------TGGTGTGGAACTCTGATTG-----------------------------------------------CGTTATGTTTAATAAAAAAAGAAAGTTAGCTTATACATATACCCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAGTATAAGGAAA---------------------------------------------------------------------------TA----------------------------------------------------------------------------------------------------------TACATATATACCC------------TTGC--AGAGTAAATGGA
droYak3 v2_chr2h_random_026:119028-119274 - TTAAGATTTAATGA-TTTCC-TTA-GA---CAA-TAAAGTTTA--ATATACA----A-TA-----------A-----------------------------------------------------AGTTAATATTT-----------AATAGT--------T--------------------------------------TAATATAATAAATA-----------------------TTACGTTTAAATTCATTGG-----------------------------------------------TCTTGAGATAG------ATAGGGAAACAGATTATATGTATATCTTCT-----------TAATAATA-ATTATAGAATTAG------------------------------------------------------------------------------------------------AAATTAAT--------------ATGTTTAATTGGAGAGGTTT------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAGTTTG------------------------CTTTAAT------------------------------------------------C----TTT-TATCGTTTTTATA-------CCCGTTACTCGT--AGAGTAAAAGGG
droEug1 scf7180000409477:11950-12199 + TTATAAAAGTATTC-ATACT-TTGTAATTCCTCAAATAGCTCCAATTAGATG----A-TT-----------ATTATTATTATTTATTGTTTTTCTATT-------------------------A-AATTTAT----ATTATTTTGTT-------------------------------------------CCATTAAATA-------------------------------------TTATTCTTATATGCCATCT--------TC---ACTTAAATA-TATCAAATTAAAA-----------------------------------------ATATTA-----------ATTTAAAT---------------------------------------------------------------------------------------------------------------------------------------------------TCAATAAATTAAAAATAATAAC--AAATTTTTTCTCTATACTTGAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----T---TCAGCTATTTATA-------CCCGTTACTCGT--AGAGTAAAAGGG
droBia1 scf7180000302408:2512653-2512877 - TTTTAAAGGACATT-TTTAC-AGACAT-------------TTTGTGGAAATC----A---GATTATTACAC-----------------------------------ACTGAAAATTTAACAACAAAC--------------------------TGATTGCCTATA-CG---------------------------------------------------------------------TGGCGTGAAAATCCCATCC--------CA-------------------------------------AGTTATAATTTATAA-AC------------------------------------------ATAAAA-TTAAAATA------------------------------------------------------------------------------------------------------------------------------AAGAA-AAAATAAGGAA------------------------------------------------------------------------------------------------------------------------------------------------ACTAAAATCCT------------------------ATTTTA-----A--------G--------------------------TATTCTTTGGGACGGCTTACACTTTTTATA-------CCAGTTACTCAT--AGAGTAAAAGGG
droTak1 scf7180000414034:1141-1370 - TTCTATGTGAATACTTCTAT-ATGAGT---TAA-AAAAAATGTAAAATGAAA----T-TT-----------TTGACAAGTATATAATGAT------------------------TTTAATAACAAATACAAC----TTTATTTTGTT-------------------------------------------TATATAA--------------------------------------------------------------------------------------------------------------------------AAAAC-------------------AAATTTA-------------AAAAAG-TTAAAATAATAAA-----ATAAAAACTTAA------------TAA----------------------TGAGATAAA---------------------------------ATAAAATA--------------ATAAA---TGATAGAATTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------T-----------------------------------------TTATTT----T----TATATTATTATA-------CCCGTTACTCGT--AGAGTAAAAGGG
droEle1 scf7180000491238:764978-765205 - TTAAGAATTACGGT-TTAAA-TTTCAT---CAA-AATATTTTA--AAAAATG-------------------T-----------------------------------------------------AGTCAATTTTT-----------T---------ATTTTGTAAT-----------------------------------------------------------------------TTTTTTAAATTCTTTTTG-----------------------------------------------ACTTATTAATAAT-----------------TTGACAGTTCAATTTTA-----------TTAAATTC-GGAAAACGATATC------------------------------------------------------------------------------------------------ATATAGCTGCCATAGGAACTAT--------------------------------------------------------------------CGAAAATTTAAGATG---------------------------------------------------------------------------CAAAT---C---GTC------------------------------------AT--------ATATAAT---------------------AATTTGTC----ATA-TATGATAATTTTA-------A-------------TGTTTTCAAGAA
droRho1 scf7180000777201:2716-2974 - TAATAGAGAATGTT-TTCGTTTTACAGTGTTTGAACAACTTTTAAGGAAAAC----A-CT-----------A-----------------------------------------------------TGGGAAC---------------------TGT----------------------------------------------------------------------TT----------GAT------------T--TAAGATATCATTTA-------TTTTGCAGGTAAATTGTA-TATG---CTTTAAAAATAATAA-TAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGGTTAATTTCTGAAAAAATTACAAAAATACAAAAATACATTTTTCCGTAA------------------------------------A-----------GGG---TGCATAGCATAACTAATTACCAATTCTTTACCAAAAATATAACTAATTATA-------CCCGTTACTCGT--AGAGTAAAAGGG
droFic1 scf7180000454055:298451-298683 - TTATAAATAAATTT-TAATA-A----------A-A------AA--ATTTTTG----TAA------------A-----------------------------------------------------A--ATGTATTA-----------AAAATTAATAATTTT--------------------------------------TAAAAAATAAAAATTATTAA------TTTTTATTAACTAATATTAATTATTTATTT-----------------------------------------------TGTTATGA--------AAAAT-----------------------------------------------------------------------------------------------------------------AAAAATAATTTAT-------------------AATTTTTATT----------------------------TATTTAATATTTAA----AGTT--ATATTT------------------------------------------------------------------------------------------------------------------------------------TGGCTTA-----------------AAA----ATTTATTATTAATTTGATTAATA------------------------------------------TGTATAATTATACCC------------TTGC--AGAGCAAAAGGG
droKik1 scf7180000302510:591699-591986 + TGAACACTGAATTA-TTTAT-TTTT-----TAA-AATATGAGA--GATTAAG----CTC------------A-----------------------------------------------------A--GTGGTTTT-----------AAAGTTTATAGTCCCAA-AGG-------CAAAGATCTTTGAATCTATTAAAAA-------------------------------------GTTTTT-------------TAAGATGTAATTCAATTATTTGTAATCAAACTAAATACAT----CGA-TGTATCAATAA-------------AGAAAATTATA-----------ATAAATATTCAAAA--------------------------------------------------------------------------------------------------------------------------------------------CAGAATTATTTAATAA-------------------------------------------------------------------------------------------------------------------------------------------TTA---ACTACGATA-GATTACTATTATAACAAGACAAGTGGTTTTA----AATAAGGTTAAAG--------------------------------T----A-C-TAGCTTCTAGAGAGCTT------------TG------AATTAAGAG
droAna3 scaffold_13077:290966-291236 + ACATACAATAATTT-TTTTT-TTTTAT---CAT-TAT--GAGA--GCA------------GAGACATACA---------------------------------------TGACATTTCA------ATGAAACTTTA-----------TAAA-TTAT-TTTTTATAAGA---------------------------------------------------------------------ATGTGTGGTATTGGCACCG---CTTCTTCTTTT-------TTTTTCAAATTATTTATA-ATTG---G----------ATTA-AAAAAAAAATTGGCACAGCCATATTATTT-------------------------------TCAAATATATTAAAAACTTTATTAAAAAATTTATTTTC------------TTATATACAAAAATCATTCAA-------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCCTTT----TCA-TCTCCTTTTTATACCCT------------TGC--A------GAGAG
droBip1 scf7180000396394:2534-2771 - TTGAAAATAAATTT-TCTCT-AC-------TAA-A-AAGCCCG--GTTATCG--------------------------------------------------------------------------------TTGA-----------AAAGTATTTTTTTCTAAAAT-----------------------------------------------------------------------ATTATAAAGTTT-----------------------------------------------------------------------------------------------------------------------------------------------------ACTAAAACTTATAATATACTTAATATAAACTTATAATATAAAATATA---------------------------------TTATAACT--------------ATAGGTAATCAGGCATCAAG----AG--TACTATTTTATTTTTACGCGGAAGTCCAAATATACATATATGTAATATAATGCAG---------------------------------------------------------------------------TC----------------------------------------------------------CACA------------------------------------------TACATTTTTATACCCT------------TGC--A------GAGAG
dp5 Unknown_group_498:18661-18848 - TTATTGTTTTTTAT-TTT-----AT--------------------------------------------------------AATGTGGTTTTTCTTTTTTACATAAATTAAGTATCTAACGC---TTGATTGTTTT-----------GAACTTTGCCATTCTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGCTGAT------------------------------------------------------------------------------------------------AAATGCAG--------------TCTAAAAACTTGACCCGATC------------------------------------------------------------------------------------------------------------------------------------------------ACTTTGT--AG------------------------CTTCATCAT-----------------------------------------TTTTTT----C----GTTATTTTTATA-------CCCGATACTCAAAATGAGTTTTGGGG
droPer2 scaffold_43:371493-371739 - TTGTAAAGGAATTA-TTATC-TAGTA------T-ACTAGTTGT--GTATATG----T-A------------T-----------------------------------------------------ATGT------------------ACAGGTATTATAGTT--------------------------------------TATGAGGTTATATGTAGTGA------AT----------GATTTTGGATTTTTGTAG-------------------------CCAAA---TTTGAG-GTTG---G----------G-----------------TTAAAGTA---------------------------------------------------------------------------------------------------AAATGATTTATAAAGAAAGCAAAAGTTAAA----------TTACCCTG--------------ATATA---TGTAGGTGTCAA----GTTT----------------------------------------------------------------------------------------------------------------------------------------ATGTTA-----------------------------ATGCATCAA-----------------------------------------TAAGTC----A----TCTAATTTTTTA-------CCCGATACTCAAAATGAGTATTGGGG
droWil2 scf2_1100000004837:1124400-1124612 - TAACT---AAATTT-CGTTT-TTGGGT---TAA-A--AACTAA--GAATATTTAATC-AA-----------A-----------------------------------------------------ATATTGAGCTT-----------AAAGGCTGCTTTTATGGAAAT---------------------------------------------------------------------TAACTAAT--------T--TATCCTATAATTTT------TCTCATCAAACTATAG--------TGA-GTTTTT-----------------------------------------------------AATAAC-GGACAAAAATAAA------------------------------------------------------------------------------------------------AAAGAG----------------AAGAAAAAC-----------------------------------------------------------AAAAGTTTTAAACAA---------------------------------------------------------------------------TTTAC----------TG------------------------AT--------------------------------------------------------------TCATCTTTTTATACCCT------------TGC--A----AAAAGGG
droVir3 scaffold_12967:101447-101662 - CAATCGAGAAATTT-TACAT-TTCAGC---CAA-C--ATTTTA--GATAAAT----A-TA-----------A-----------------------------------------------------ATATTCTTATA-----------TATATATA--TATATATATAT-----------------------------------------ATATATAGTATTTTATAT----------TTATATTTTATTTTTGTTG-----------------------------------------------TCATATTCTGCGTAG-GTAAGCAATC----------------------------------------------------TA------------------------------------------------------------------------------------------------CAATAATTAACAAAAATACTAC--------------------------------------------------------------------TAAAACTTAAAGAAA---------------------------------------------------------------------------TCTAC---T---ATT------------------------------------AA--------GTA------------------------------------------TTTATATTTATACCCT------------TGC--A------GAGGG
droMoj3 scaffold_6680:1125531-1125763 + TTATAATTTAATTT-ATATT-TTATTT---TAA-AATAAAAAT-----AATG----A-TA-----------A----------------------------------------------------------AATTTT-----------AGTAATTATTTTTTAA--------------------------------------------------------------------------TAGTATAAAATTCAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATATTTTGGTTATATTTTCTAAATTACATATCATGTGTAAAATAAATATTAATATTTAATAATTGATA-TTGAAAGAATTGGAAGAAT---------AT----TTCGAAA------------------------------------T-----------------------------------------TTGTTT----A----TATATTTTTATACCCTGAACCCATTGAAAAT--GGGAAATCAGGG
droGri2 scaffold_15081:1994825-1995061 - AGATCGTCAAACT-------------------------------------------------------------------------------------------------------------------TACGTTTA-----------TTATTTTATTATTATATAGTTCGGAATGGAGCTGTTTCCACATAAACTAAA-------------------------------------------TAAA----------------TATGATTAT-------TTTATTAAATTATATATAA----TAA-T---------------ATATAAAACGAGAATACGA-----------ATATATATTCAAGACAGAGTATTACAGAATCAG-----------------------------TTATT------------CCGCAT--ATGAATGATGGCC-------------------GAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAT----A----TATTTATTTATACCCTGAACCCATTAAAAGT--GGGCAAAAAGGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTATAAATGAATTT-TTTAT-TTGTGC---CAA-AACAGCTGA--GAAAACG----A-CA-----------A-----------------------------------------------------ATGTAAGTTTT-----------AAAGTTTATTTTTCTATAAGG---------------------------------------------------------------------TGGTGTTGAACTCCTATTG-----------------------------------------------CCTTATAATTAATTA-----------TTGCTTAAACACACGGCTTTA-----------TTAAAAAA-TTAAAACAATAAA------------------------------------------------------------------------------------------------AAATACCG--------------ATAAAGAACCAGACAAGAAA------------------------------------------------------------------------------------------------------------------------------------------------ACTATGATTTG------------------------ATTTCAT-----------------------------------------ATTAATTC----AAA-TATACTAATTATA-------ACCGTTACTTGT--GGAGGAAAAGGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................TGC---CAA-AACAGCTGA--GAAAACG----A-CA-----------A-----------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300000000000003000
........................TGC---CAA-AACAGCTGA--GAAAACG----A-CA-----------A-----------------------------------------------------A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000010000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGAACCAGACAAGAAA------------------------------------------------------------------------------------------------------------------------------------------------ACT..............................................................................................................................................2212.00200200000000000000
......................TGTGC---CAA-AACAGCTGA--GAAAACG----A-CA-----------A-----------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000000000002000
.....................................................................................................................................................AGTTTATTTTTCTATAAGG---------------------------------------------------------------------TGGTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
.........................................................................................................................................................TATTTTTCTATAAGG---------------------------------------------------------------------TGGTGTTGAACTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
................................A-AACAGCTGA--GAAAACG----A-CA-----------A-----------------------------------------------------ATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
........................TGC---CAA-AACAGCTGA--GAAAACG----A-CA-----------A-----------------------------------------------------ATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
..............................CAA-AACAGCTGA--GAAAACG----A-CA-----------A-----------------------------------------------------ATCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000010000
...............................AA-AACAGCTGA--GAAAACG----A-CA-----------A-----------------------------------------------------ATCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000001000
................................A-AACAGCTGA--GAAAACG----A-C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000001000000000
........................TGC---CAA-AACAGCTGA--GAAAACG----A-................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000001000
.....................................................................................................................................................AGTTTATTTTTCTATAAGG---------------------------------------------------------------------TGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000000000
..................................AACAGCTGA--GAAAACG----A-CA-----------A-----------------------------------------------------ATCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
.........................GC---CAA-AACAGCTGA--GAAAACG----A-CA-----------A-----------------------------------------------------ATCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000000000001000
droSec2
TTATAAATGAATTT-TTTAT-TTGTGC---CAA-AACAGCTGA--GAAAACC----A-CA-----------A-----------------------------------------------------ATGTAAGTTTT-----------AAAGTTTAATTTTCTATAAGG---------------------------------------------------------------------TGGTGTTGAACTCCTATTG-----------------------------------------------CCTTATAATTAATAA-AAAAGAAAACTTGCTTAAACACACAGCTTTA-----------TTAAAAAA-TTAAAACAATAAA------------------------------------------------------------------------------------------------AAATACCG--------------ATAAAGAACCAGACAAGAAA------------------------------------------------------------------------------------------------------------------------------------------------ACTATGATTTG------------------------ATTTCAT-----------------------------------------ATTTATTC----AAA-TATACTAATTATA-------CCCGTTACTTGT--GGAGTAAACGCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................AACAGCTGA--GAAAACC----A-CA-----------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
...................T-TTGTGC---CAA-AACAGCTGA--.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
dm3
TTATAAATGAATTT-TTTAT-TTGTGC---CAA-AACAGCTGA--GAAAACG----A-CA-----------A-----------------------------------------------------ATGTAAGTTTT-----------TAAGTTTATTTTTCTATAAGG---------------------------------------------------------------------TGGTGTAGAACTCCTATTG-----------------------------------------------CCTTATATTTAATAA-AAAAGAAAGCTAGCTTATACACACGCCTTAA-----------TTAAACAA-TTAAAATAATAAA------------------------------------------------------------------------------------------------ATATACCG--------------AAGAAGAACAAAACAAGAAA------------------------------------------------------------------------------------------------------------------------------------------------ACTATGATTTG------------------------ATTTCTT-----------------------------------------ATTAATTC----AAA-TATAATAATTATA-------CCAGTTGCTTAA--AAAGTAG-AAGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................AGCTGA--GAAAACG----A-CA-----------A-----------------------------------------------------ATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AACAGCTGA--GAAAACG----A-CA-----------A-----------------------------------------------------ATGTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AGCTGA--GAAAACG----A-CA-----------A-----------------------------------------------------ATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TTT-TTTAT-TTGTGC---CAA-AACAGCTGA--.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGC---CAA-AACAGCTGA--GAAAACG----A-CA-----------A-----------------------------------------------------A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AACAGCTGA--GAAAACG----A-CA-----------A-----------------------------------------------------A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AACAGCTGA--GAAAACG----A-CA-----------A-----------------------------------------------------AT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TAATAAA------------------------------------------------------------------------------------------------ATATACCG--------------AAGAAGAACAAAA........................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................AACAGCTGA--GAAAACG----A-CA-----------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TTATACACACGCCTTAA-----------TT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......ATGAATTT-TTTAT-TTGTGC---CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................CCTTAA-----------TTAAACAA-TTAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................T-TTGTGC---CAA-AACAGCTGA--.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................GTTTATTTTTCTATAAGG---------------------------------------------------------------------TGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...............................................AAACG----A-CA-----------A-----------------------------------------------------ATGTAAGTTTT-----------TAAGTTTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TGAATTT-TTTAT-TTGTGC---CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................T-TTGTGC---CAA-AACAGCTGA--GAAAACG----A-CA-----------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................TTTCTATAAGG---------------------------------------------------------------------TGGTGTAGAACTCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TT-TTTAT-TTGTGC---CAA-AACAGCTGA--.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................TTTCTATAAGG---------------------------------------------------------------------TGGTGTAGAACTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGTGC---CAA-AACAGCTGA--GAAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TATTTAATAA-AAAAGAAAGCTAGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........GAATTT-TTTAT-TTGTGC---CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCG--------------AAGAAGAACAAAACAAGAAA------------------------------------------------------------------------------------------------------------------------------------------------A................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............TT-TTTAT-TTGTGC---CAA-AACAGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................TACACACGCCTTAA-----------TTAAACAA-TTAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGTGC---CAA-AACAGCTGA--GAAAACG----A-C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TAT-TTGTGC---CAA-AACAGCTGA--GAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TAATAAA------------------------------------------------------------------------------------------------ATATACCG--------------AAGAAGAAC............................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGTGC---CAA-AACAGCTGA--GAAAACG----A-CA-----------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GC---CAA-AACAGCTGA--GAAAACG----A-CA-----------A-----------------------------------------------------T............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................GAAAGCTAGCTTATACACACGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........TTT-TTTAT-TTGTGC---CAA-AACAGCTGA--GA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......ATGAATTT-TTTAT-TTGTGC---CAA-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GC---CAA-AACAGCTGA--GAAAACG----A-CA-----------A-----------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................TATTG-----------------------------------------------CCTTATATTTAATAA-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TAGCTTATACACACGCCTTAA-----------TTAAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................TCTATAAGG---------------------------------------------------------------------TGGTGTAGAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................AAAGCTAGCTTATACACACGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GC---CAA-AACAGCTGA--GAAAACG----A-C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTTAT-TTGTGC---CAA-AACAGCTGA--GAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTGTGC---CAA-AACAGCTGA--GAAAACG----A-CA-----------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TAT-TTGTGC---CAA-AACAGCTGA--GAAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTGTGC---CAA-AACAGCTGA--GAAAACG----A-C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................GGTGTAGAACTCCTATTG-----------------------------------------------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................TTTT-----------TAAGTTTATTTTTCTATAAGG---------------------------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TTAATAA-AAAAGAAAGCTAGCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGC---CAA-AACAGCTGA--GAAAACG----A-C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC----AAA-TATAATAATTATA-------CCAG......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TAT-TTGTGC---CAA-AACAGCTGA--GAAAACG----A-C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AA-AACAGCTGA--GAAAACG----A-C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCG--------------AAGAAGAACAAAACAAGAA..................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.............T-TTTAT-TTGTGC---CAA-AACAGCTGA--GAAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................ATAAGG---------------------------------------------------------------------TGGTGTAGAACTCCTATTG-----------------------------------------------CCTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTTG------------------------ATTTCTT-----------------------------------------ATG...........................................................1750.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTATAAATGAATTT-TTTAT-TTGTGC---CAA-AACAGCTGA--GAAAACA----A-CA-----------A-----------------------------------------------------ATGTAAGTTTT-----------TAAGTTTATTTTTCTATAAGG---------------------------------------------------------------------TGGTGTGGAACTCTGATTG-----------------------------------------------CGTTATGTTTAATAAAAAAAGAAAGTTAGCTTATACATATACCCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAGTATAAGGAAA---------------------------------------------------------------------------TA----------------------------------------------------------------------------------------------------------TACATATATACCC------------TTGC--AGAGTAAATGGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............TT-TTTAT-TTGTGC---CAA-AACAGCTGA--.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
...................T-TTGTGC---CAA-AACAGCTGA--GA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
droYak3
TTAAGATTTAATGA-TTTCC-TTA-GA---CAA-TAAAGTTTA--ATATACA----A-TA-----------A-----------------------------------------------------AGTTAATATTT-----------AATAGT--------T--------------------------------------TAATATAATAAATA-----------------------TTACGTTTAAATTCATTGG-----------------------------------------------TCTTGAGATAG------ATAGGGAAACAGATTATATGTATATCTTCT-----------TAATAATA-ATTATAGAATTAG------------------------------------------------------------------------------------------------AAATTAAT--------------ATGTTTAATTGGAGAGGTTT------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAGTTTG------------------------CTTTAAT------------------------------------------------C----TTT-TATCGTTTTTATA-------CCCGTTACTCGT--AGAGTAAAAGGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATA-------CCCGTTACTCGT--AGAGTAAAA...26200.05101000000000
droEug1
TTATAAAAGTATTC-ATACT-TTGTAATTCCTCAAATAGCTCCAATTAGATG----A-TT-----------ATTATTATTATTTATTGTTTTTCTATT-------------------------A-AATTTAT----ATTATTTTGTT-------------------------------------------CCATTAAATA-------------------------------------TTATTCTTATATGCCATCT--------TC---ACTTAAATA-TATCAAATTAAAA-----------------------------------------ATATTA-----------ATTTAAAT---------------------------------------------------------------------------------------------------------------------------------------------------TCAATAAATTAAAAATAATAAC--AAATTTTTTCTCTATACTTGAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----T---TCAGCTATTTATA-------CCCGTTACTCGT--AGAGTAAAAGGGSizeHit CountTotal NormTotal
No Reads
droBia1
TTTTAAAGGACATT-TTTAC-AGACAT-------------TTTGTGGAAATC----A---GATTATTACAC-----------------------------------ACTGAAAATTTAACAACAAAC--------------------------TGATTGCCTATA-CG---------------------------------------------------------------------TGGCGTGAAAATCCCATCC--------CA-------------------------------------AGTTATAATTTATAA-AC------------------------------------------ATAAAA-TTAAAATA------------------------------------------------------------------------------------------------------------------------------AAGAA-AAAATAAGGAA------------------------------------------------------------------------------------------------------------------------------------------------ACTAAAATCCT------------------------ATTTTA-----A--------G--------------------------TATTCTTTGGGACGGCTTACACTTTTTATA-------CCAGTTACTCAT--AGAGTAAAAGGGSizeHit CountTotal NormTotal
No Reads
droTak1
TTCTATGTGAATACTTCTAT-ATGAGT---TAA-AAAAAATGTAAAATGAAA----T-TT-----------TTGACAAGTATATAATGAT------------------------TTTAATAACAAATACAAC----TTTATTTTGTT-------------------------------------------TATATAA--------------------------------------------------------------------------------------------------------------------------AAAAC-------------------AAATTTA-------------AAAAAG-TTAAAATAATAAA-----ATAAAAACTTAA------------TAA----------------------TGAGATAAA---------------------------------ATAAAATA--------------ATAAA---TGATAGAATTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------T-----------------------------------------TTATTT----T----TATATTATTATA-------CCCGTTACTCGT--AGAGTAAAAGGGSizeHit CountTotal NormTotal
No Reads
droEle1
TTAAGAATTACGGT-TTAAA-TTTCAT---CAA-AATATTTTA--AAAAATG-------------------T-----------------------------------------------------AGTCAATTTTT-----------T---------ATTTTGTAAT-----------------------------------------------------------------------TTTTTTAAATTCTTTTTG-----------------------------------------------ACTTATTAATAAT-----------------TTGACAGTTCAATTTTA-----------TTAAATTC-GGAAAACGATATC------------------------------------------------------------------------------------------------ATATAGCTGCCATAGGAACTAT--------------------------------------------------------------------CGAAAATTTAAGATG---------------------------------------------------------------------------CAAAT---C---GTC------------------------------------AT--------ATATAAT---------------------AATTTGTC----ATA-TATGATAATTTTA-------A-------------TGTTTTCAAGAASizeHit CountTotal NormTotal
No Reads
droRho1
TAATAGAGAATGTT-TTCGTTTTACAGTGTTTGAACAACTTTTAAGGAAAAC----A-CT-----------A-----------------------------------------------------TGGGAAC---------------------TGT----------------------------------------------------------------------TT----------GAT------------T--TAAGATATCATTTA-------TTTTGCAGGTAAATTGTA-TATG---CTTTAAAAATAATAA-TAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGGTTAATTTCTGAAAAAATTACAAAAATACAAAAATACATTTTTCCGTAA------------------------------------A-----------GGG---TGCATAGCATAACTAATTACCAATTCTTTACCAAAAATATAACTAATTATA-------CCCGTTACTCGT--AGAGTAAAAGGGSizeHit CountTotal NormTotal
No Reads
droFic1
TTATAAATAAATTT-TAATA-A----------A-A------AA--ATTTTTG----TAA------------A-----------------------------------------------------A--ATGTATTA-----------AAAATTAATAATTTT--------------------------------------TAAAAAATAAAAATTATTAA------TTTTTATTAACTAATATTAATTATTTATTT-----------------------------------------------TGTTATGA--------AAAAT-----------------------------------------------------------------------------------------------------------------AAAAATAATTTAT-------------------AATTTTTATT----------------------------TATTTAATATTTAA----AGTT--ATATTT------------------------------------------------------------------------------------------------------------------------------------TGGCTTA-----------------AAA----ATTTATTATTAATTTGATTAATA------------------------------------------TGTATAATTATACCC------------TTGC--AGAGCAAAAGGGSizeHit CountTotal NormTotal
No Reads
droKik1
TGAACACTGAATTA-TTTAT-TTTT-----TAA-AATATGAGA--GATTAAG----CTC------------A-----------------------------------------------------A--GTGGTTTT-----------AAAGTTTATAGTCCCAA-AGG-------CAAAGATCTTTGAATCTATTAAAAA-------------------------------------GTTTTT-------------TAAGATGTAATTCAATTATTTGTAATCAAACTAAATACAT----CGA-TGTATCAATAA-------------AGAAAATTATA-----------ATAAATATTCAAAA--------------------------------------------------------------------------------------------------------------------------------------------CAGAATTATTTAATAA-------------------------------------------------------------------------------------------------------------------------------------------TTA---ACTACGATA-GATTACTATTATAACAAGACAAGTGGTTTTA----AATAAGGTTAAAG--------------------------------T----A-C-TAGCTTCTAGAGAGCTT------------TG------AATTAAGAGSizeHit CountTotal NormTotal
No Reads
droAna3
ACATACAATAATTT-TTTTT-TTTTAT---CAT-TAT--GAGA--GCA------------GAGACATACA---------------------------------------TGACATTTCA------ATGAAACTTTA-----------TAAA-TTAT-TTTTTATAAGA---------------------------------------------------------------------ATGTGTGGTATTGGCACCG---CTTCTTCTTTT-------TTTTTCAAATTATTTATA-ATTG---G----------ATTA-AAAAAAAAATTGGCACAGCCATATTATTT-------------------------------TCAAATATATTAAAAACTTTATTAAAAAATTTATTTTC------------TTATATACAAAAATCATTCAA-------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCCTTT----TCA-TCTCCTTTTTATACCCT------------TGC--A------GAGAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TTGAAAATAAATTT-TCTCT-AC-------TAA-A-AAGCCCG--GTTATCG--------------------------------------------------------------------------------TTGA-----------AAAGTATTTTTTTCTAAAAT-----------------------------------------------------------------------ATTATAAAGTTT-----------------------------------------------------------------------------------------------------------------------------------------------------ACTAAAACTTATAATATACTTAATATAAACTTATAATATAAAATATA---------------------------------TTATAACT--------------ATAGGTAATCAGGCATCAAG----AG--TACTATTTTATTTTTACGCGGAAGTCCAAATATACATATATGTAATATAATGCAG---------------------------------------------------------------------------TC----------------------------------------------------------CACA------------------------------------------TACATTTTTATACCCT------------TGC--A------GAGAGSizeHit CountTotal NormTotal
No Reads
dp5
TTATTGTTTTTTAT-TTT-----AT--------------------------------------------------------AATGTGGTTTTTCTTTTTTACATAAATTAAGTATCTAACGC---TTGATTGTTTT-----------GAACTTTGCCATTCTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGCTGAT------------------------------------------------------------------------------------------------AAATGCAG--------------TCTAAAAACTTGACCCGATC------------------------------------------------------------------------------------------------------------------------------------------------ACTTTGT--AG------------------------CTTCATCAT-----------------------------------------TTTTTT----C----GTTATTTTTATA-------CCCGATACTCAAAATGAGTTTTGGGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TTGTAAAGGAATTA-TTATC-TAGTA------T-ACTAGTTGT--GTATATG----T-A------------T-----------------------------------------------------ATGT------------------ACAGGTATTATAGTT--------------------------------------TATGAGGTTATATGTAGTGA------AT----------GATTTTGGATTTTTGTAG-------------------------CCAAA---TTTGAG-GTTG---G----------G-----------------TTAAAGTA---------------------------------------------------------------------------------------------------AAATGATTTATAAAGAAAGCAAAAGTTAAA----------TTACCCTG--------------ATATA---TGTAGGTGTCAA----GTTT----------------------------------------------------------------------------------------------------------------------------------------ATGTTA-----------------------------ATGCATCAA-----------------------------------------TAAGTC----A----TCTAATTTTTTA-------CCCGATACTCAAAATGAGTATTGGGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................TAGTTGT--GTATATG----T-A------------T-----------------------------------------------------ATGT------------------ACAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.501010000
................................................................................................................................................................................................................TATATGTAGTGA------AT----------GATTTTGGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.332020000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTTAAA----------TTACCCTG--------------ATATA---TGTA.........................................................................................................................................................................................................................................................................................................2650.201010000
..........................................................................................................................................................................................................TGAGGTTATATGTAGTGA------AT----------G...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131000001
.................................................................................................................................................................T--------------------------------------TATGAGGTTATATGTAGTGA------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131010000
........................................................................................................................................................................................................TATGAGGTTATATGTAGTGA------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.111000001
.............................................................................................................................................................................................................................................................................................A---TTTGAG-GTTG---G----------G-----------------TTAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.102200000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGAAAGCAAAAGTTAAA----------TTACCC.....................................................................................................................................................................................................................................................................................................................................26160.061010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGAAAGCAAAAGTTAAA----------TTACC......................................................................................................................................................................................................................................................................................................................................25160.061000001
droWil2
TAACT---AAATTT-CGTTT-TTGGGT---TAA-A--AACTAA--GAATATTTAATC-AA-----------A-----------------------------------------------------ATATTGAGCTT-----------AAAGGCTGCTTTTATGGAAAT---------------------------------------------------------------------TAACTAAT--------T--TATCCTATAATTTT------TCTCATCAAACTATAG--------TGA-GTTTTT-----------------------------------------------------AATAAC-GGACAAAAATAAA------------------------------------------------------------------------------------------------AAAGAG----------------AAGAAAAAC-----------------------------------------------------------AAAAGTTTTAAACAA---------------------------------------------------------------------------TTTAC----------TG------------------------AT--------------------------------------------------------------TCATCTTTTTATACCCT------------TGC--A----AAAAGGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
CAATCGAGAAATTT-TACAT-TTCAGC---CAA-C--ATTTTA--GATAAAT----A-TA-----------A-----------------------------------------------------ATATTCTTATA-----------TATATATA--TATATATATAT-----------------------------------------ATATATAGTATTTTATAT----------TTATATTTTATTTTTGTTG-----------------------------------------------TCATATTCTGCGTAG-GTAAGCAATC----------------------------------------------------TA------------------------------------------------------------------------------------------------CAATAATTAACAAAAATACTAC--------------------------------------------------------------------TAAAACTTAAAGAAA---------------------------------------------------------------------------TCTAC---T---ATT------------------------------------AA--------GTA------------------------------------------TTTATATTTATACCCT------------TGC--A------GAGGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
TTATAATTTAATTT-ATATT-TTATTT---TAA-AATAAAAAT-----AATG----A-TA-----------A----------------------------------------------------------AATTTT-----------AGTAATTATTTTTTAA--------------------------------------------------------------------------TAGTATAAAATTCAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATATTTTGGTTATATTTTCTAAATTACATATCATGTGTAAAATAAATATTAATATTTAATAATTGATA-TTGAAAGAATTGGAAGAAT---------AT----TTCGAAA------------------------------------T-----------------------------------------TTGTTT----A----TATATTTTTATACCCTGAACCCATTGAAAAT--GGGAAATCAGGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AGATCGTCAAACT-------------------------------------------------------------------------------------------------------------------TACGTTTA-----------TTATTTTATTATTATATAGTTCGGAATGGAGCTGTTTCCACATAAACTAAA-------------------------------------------TAAA----------------TATGATTAT-------TTTATTAAATTATATATAA----TAA-T---------------ATATAAAACGAGAATACGA-----------ATATATATTCAAGACAGAGTATTACAGAATCAG-----------------------------TTATT------------CCGCAT--ATGAATGATGGCC-------------------GAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAT----A----TATTTATTTATACCCTGAACCCATTAAAAGT--GGGCAAAAAGGGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 05:59 AM