ID:

dsi_9833

 Coordinate:

2r:10566301-10566450 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.6

Flybase annnotation

exon [2r_10566451_10566571_-]; five_prime_UTR [2r_10566451_10566571_-]; intron [2r_10565863_10566450_-]

Repeatable elements

NameClassFamilyStrand
(CA)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ACATAACCGATCAGTGCGGATAATAAGAATTGGCAATTCAAAATTAAATGGTAAACAAACGTTGGTCAGAGCGGTTAATTAAACTTAACCCCAGGGACGCGGAGAGAGTGGCCAGTGAAAGCCAGAACACTCTCTTTCGTCGGACCGTTTGTGTGTGCGTGTGTGTTACGTGTGTGCGTATGTGTCTGTGTTGACAAAATACAACAAATCGCAGCGAAAACAGGAAGTGTACGAACGATAAAGCATAAGA
****************************************************.......(((..(((.....((((((......)))))).....))))))..........******************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR902009
testis
 M024
male body		 M025
embryo
 O001
Testis
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
................CGGATAATAAGAATTGGC........................................................................................................................................................................................................................ 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0
....................................................AAACAAACGTTGGTCAGAGCGGTT.............................................................................................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.....................................................AACAAACGTTGGTCAGAG................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................AGGGACGCGGAGAGAGTGG........................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................................................TAACCCCGGGGACGCGGAGA................................................................................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0
................................................................................................................................ACTCTCTTTCGTCGGACCG....................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.....................................................................................................................................CTTTCGTCGGACCGTTTGTGTGTGCGT.......................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................CAGCGAAAACAGGAAGTGTACGAAC.............. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................CAGAACGCTCTCTTTCGTCGG........................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................AACAAACGTTGGTCAGAGCGG................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.............................................................................................................................AACACTCTCTTTCGTCGGACCGTT..................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................AGTGGCCAGTAGAAGCGAGAA........................................................................................................................... 21 3 3 0.33 1 0 0 0 0 0 0 1 0 0
................................................................GTCAGAGCCGTTAAT........................................................................................................................................................................... 15 1 3 0.33 1 0 0 0 0 0 0 1 0 0
.................................................GGCAAAGAAATGTTGGTCAGA.................................................................................................................................................................................... 21 3 7 0.29 2 2 0 0 0 0 0 0 0 0
..............................TCGCAATTCAAAATTAAATCGTT..................................................................................................................................................................................................... 23 3 5 0.20 1 0 0 0 0 0 0 0 1 0
............................................................GTTGGGCAGAGCGGT............................................................................................................................................................................... 15 1 14 0.14 2 0 0 0 0 0 0 0 0 2
...................................................................................CTTAACCTCAAGGTCGCGG.................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1
...................................................................................................CCGAGAGAGGGGCCCGTG..................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

TGTATTGGCTAGTCACGCCTATTATTCTTAACCGTTAAGTTTTAATTTACCATTTGTTTGCAACCAGTCTCGCCAATTAATTTGAATTGGGGTCCCTGCGCCTCTCTCACCGGTCACTTTCGGTCTTGTGAGAGAAAGCAGCCTGGCAAACACACACGCACACACAATGCACACACGCATACACAGACACAACTGTTTTATGTTGTTTAGCGTCGCTTTTGTCCTTCACATGCTTGCTATTTCGTATTCT
*******************************************************************************************************************************************.......(((..(((.....((((((......)))))).....))))))..........**************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 M023
head
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
.................................................CCGTTTCTTTACAACCAGTCT.................................................................................................................................................................................... 21 3 7 1.71 12 0 2 0 10 0 0 0 0 0
...............................................................CCAGTCTCGCCAATTAATTT....................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..............................................................ACCAGTCTCGCCAGTT............................................................................................................................................................................ 16 1 1 1.00 1 0 0 1 0 0 0 0 0 0
......................................................................................................................................ATAGCAGCCTGACAAACAC................................................................................................. 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................AAAGCAGCCTGACAAAAAGACA.............................................................................................. 22 3 1 1.00 1 0 0 0 0 1 0 0 0 0
..................................TTAAGTTCTAATTTTCGATTTGT................................................................................................................................................................................................. 23 3 2 0.50 1 0 0 1 0 0 0 0 0 0
..............................................................ACCAGTCTCGCCAGTTCA.......................................................................................................................................................................... 18 2 5 0.40 2 0 1 0 0 0 1 0 0 0
.......................................................................................................................................TAGCAGCCTGACAAAAACACA.............................................................................................. 21 3 11 0.36 4 4 0 0 0 0 0 0 0 0
......................................................................................................................................AAAGCAGCCTGACAAA.................................................................................................... 16 1 3 0.33 1 1 0 0 0 0 0 0 0 0
..............................................................ACCAGTCTCGCCAGTTCAAT........................................................................................................................................................................ 20 3 10 0.30 3 0 0 0 0 0 1 1 1 0
....................................................................................................................................AAAAAGCAGCCTGACAA..................................................................................................... 17 2 20 0.30 6 5 0 0 0 1 0 0 0 0
......................................................................................................................................AAAGCAGCCTGACAA..................................................................................................... 15 1 7 0.29 2 2 0 0 0 0 0 0 0 0
......................................................................................................................................ATAGCAGCCTGGCATAC................................................................................................... 17 2 5 0.20 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CACATGCGTGCTATTTGGA..... 19 3 5 0.20 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................ATAGCAGCCTGACAAAAACA................................................................................................ 20 3 14 0.14 2 1 0 0 0 1 0 0 0 0
.....................................................................................................................................AAAAGCAGCCTGGCAAAAAAA................................................................................................ 21 3 9 0.11 1 1 0 0 0 0 0 0 0 0
..............................................................ACCAGTCTCGCCAGT............................................................................................................................................................................. 15 1 9 0.11 1 0 0 0 0 0 1 0 0 0
......................................................................................................................................AAAGCAGCCTGACAAAA................................................................................................... 17 2 20 0.10 2 2 0 0 0 0 0 0 0 0
.......................................................................................................................................AAGCAGCCTGACAAA.................................................................................................... 15 1 11 0.09 1 0 0 0 0 1 0 0 0 0
..............................AGCGTTAAGTTTTAATTTGGC....................................................................................................................................................................................................... 21 3 11 0.09 1 0 0 0 0 0 1 0 0 0
................................................................................................................................................................................................................................TCCACATGCGTGCTATTTG....... 19 3 13 0.08 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................TAGCAGCCTGACAAACA.................................................................................................. 17 2 14 0.07 1 1 0 0 0 0 0 0 0 0
..............................................................ACCAGTCTCGCCAGTTC........................................................................................................................................................................... 17 2 16 0.06 1 0 0 1 0 0 0 0 0 0
...............................................................CGAGTCTCGGCAATTAAAT........................................................................................................................................................................ 19 3 17 0.06 1 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................ATCCACATGCGTGCTATT......... 18 3 20 0.05 1 0 1 0 0 0 0 0 0 0
..TAGTGGCTACCCACGCCTA..................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0
....................................................................................................................................AGATAGCAGCCTGACA...................................................................................................... 16 2 20 0.05 1 1 0 0 0 0 0 0 0 0
....................................................................CTGGCCACTTAATTTG...................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1
......................................................................................................................................AAAGCAGCCTGACAAAAAAA................................................................................................ 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:10566251-10566500 - dsi_9833 ACATAACCGATCAGTGCGGATAAT-AAGAAT-TGGCAATTCAAAATTAAATGGTAAAC---------------------------------AA-ACGTTGG---TCAGAGCGGT--------------------TAATTAAA-CTTAACCCCA------GGG-----------------ACG----------------------CGG--AGAGA--G---TGGCCAGTGAAAGC---C--AGAA-------CACTC--TCT---TTCG--TCGGACCGTTTG--------------TGTG--------TGCGTGTGT------GTTA---------CGTG----TGTGCG--------------TAT------GTGTCTG-TGTTGACAA-AATACAAC---A------AATCGCAGCG-----AAAACAGGAAGTGTACGAACGATAAAGCATAA---GA-------------------------------------
droSec2 scaffold_1:7403460-7403709 - ACATAACCGATCAGTGCGGATAAT-AAGAAT-TGGCAATTCAAAATTAAATGGTAAAC---------------------------------AA-ACGTTGG---TCAGAGCGGT--------------------TAATTAAA-CTTAACCCCA------GGG-----------------ACG----------------------CGG--AGAGA--G---TGGCCAGTGAAAGC---C--AGAA-------CACTC--TCT---TTCG--TCGGACCGTTTA--------------TGTG--------TGTGTGTGT------GTTA---------CGTG----TGTGCG--------------TAT------GTGTCTG-TGTTGACAA-AATACAAC---A------AATCGCAGCG-----AAAACAGGAAGTGTACGAACGATAAAGCATAA---GA-------------------------------------
dm3 chr2R:9877877-9878120 - ACATAACCGATCAGTGCGGATAAT-AAGAAT-TGGCAATTCAAAATTAAATGGTAAAC---------------------------------GA-ACGT-------CGGCGCGAT--------------------TAATTAAA-CTCAACCATA------GGA-----------------ACG----------------------CGG--AGAGA--G---TGGCCAGTGAAAGC---C--AGAA-------CACTC--TCT---TTCG--TCGGAGCGTC----------------TGTG--------TGTGTGTGT------GTTA---------CGTG----TGTGCG--------------TAT------GTGTCTG-TGTTGACAA-AATACAAC---A------AATCGCAGCG-----AAAACAGGAAGTGTACGAACGATAAAGCATAA---GA-------------------------------------
droEre2 scaffold_4845:15943079-15943313 + ACACAACCGATCAGTGCGGATAAT-AAGAAT-TGGCAAATCAAAATTAAATGGTAAAC---------------------------------AA-ACGTTAG---TCGGCGCGGC--------------------TAATT-------AACCACA------GAG-----------------ACG----------------------CGG--AGAGA--G---TGGCCAGTGAAAGC---C--AGAA-------CACTC--TCTCGC---C------------T--------C------AGCG--------TGTGTGTGT--G----TTA---------CGTG----TGTGCG--------------TAT------GTGTCTG-TGTTGACAA-AATACAAC---A------AATCGCAGCG-----AAAACAGGAAGTGTGTGAACGATAAAGCATAAA--GA-------------------------------------
droYak3 2R:7074945-7075173 + ACACAACCGATTAGTGCGGATAAT-AAGAAT-TGGCAATTCAAAATTAAATGGTAAAC---------------------------------AA-GCGTTAG---TCGGCGCGGG--------------------TTATT-------AGCCGCA------TAT-----------------ACG----------------------CGG--AGAGA--G---TAGCCAGTGAAAGC---C--AGAA-------CACTC--TC--GC---C------------T--------C------AGCGTGTG----T----GTGT--GTGTGTTA---------CA--------------------------TGT------GTGTCTG-TGTTGACAA-AATACAAC---A------AATCGCAGCG-----AAAACAGGAAGTGTACGAACGATAAAGCATAAA--GA-------------------------------------
droEug1 scf7180000409462:2966148-2966380 + ACACAACCGATCAGTGCGGATAAT-AAGAAT-TGGCAATACAAAATTAAATGGTAAAC---------------------------------AA-ACGTTTGAATTCGAAGGGGC--------------------TAATT-------A-------------------------------A--C----------------------CGT--ACAGA--G---TAGCCAGTGAAAGC---A--AGAA-------TACTC--TCTCGG---CT--------CCG----------------A--GTGTGTGTGTGTGTGGTT------GTAA---------C-TG----TATGCG----------------T------GTGTCTG-TGTTGACAA-AATACAAC---A------AATCGCAGCG-----AAAACAGGAAGTGTGTGAACGATAAAACATAAA--GA-------------------------------------
droBia1 scf7180000302292:3810382-3810614 - ACTCAAGCGGTCAGCGTGGATAAT-AGGAAT-TGGCAGTACAAAATTAAATGGTAAAC---------------------------------AG-AGGCTGG---TCGGCGTGGC--------------------TGATG--------------------GGG-----------------GCG----------------------CAG--CGAGC--G---TGGCCAGTGAAAGC---C--AGAA-------CGCTCGCTCT---CTCG--CTCGGCTGCC----------------AGAG--------TGCGTGAGT--GT------------------G----TGTGCG--------------TGT------GCGTCTG-TGTTGACAA-AATACAAC---A------AATCGCAGCG-----AAAACAGGAAGTGTGTGGACGATAAAGCATAAA--GA-------------------------------------
droTak1 scf7180000415376:98106-98342 - ACACAACCGATCGGCGTGGATAAT-AAGAAT-TGGCAGTACTAAATTAAATGGTAAAC---------------------------------AA-ACATTAG---ACGGCGTGGC--------------------TAAA-----------CGCA------GGG------------------TG----------------------AGG--AGAGA--GCG-GGACGAGTGAAAGC---C--AGAA-------CACTC--TCTCGC---CTGCCCGTGTGCG----------------TGTT--------TGTGTGTGT--GTG----------------TG----TGTGCG----------------T------TCGTGTG-TGTTGACAA-AATACAAC---A------AATCGCAGCG-----AAAACAGGAAGTGTGTGAACGATAAAACATAAA--GA-------------------------------------
droEle1 scf7180000491271:239774-239996 - ACCGACTCGATAAGTGCGGAAACT-AAGAGT-TAGCAGTACAAAATTAAATGGTAACC---------------------------------AA-ACGCAAG---TGGCCGGGAC--------------------TAATT-------G-------------------------------A--C----------------------TGG--AGAGA--G---TAGACAGTGAAAGC---C--AGAA-------CACTT--TCTGGC------------TGCA----------------AGGG--------TGTGTGTGT--GTG----------------TG----TGTGCG----------------T------TTGTCTG-TGTTGACAA-AATACAAC---A------AATCGCAGCG-----AAAACAGGAAGTGTGTGAACGATAAAACATAAAAAGA-------------------------------------
droRho1 scf7180000777315:7351-7558 + ACACAACCGATAAGTGCGAATAAT-AAGGGT-T-ACAATACTAAATTAAATGGTAAAC---------------------------------AA-ACGCAT----ATGGCCGGAC--------------------TAAAA-------A-------------------------------T--C----------------------TGG--ATAGA--G---TAGACAGTGAAAGC---C--AGAA-------CCCTC--TCTGGA---AT--------GC----------------------------------GAGT--GTG--------------------TGTG------------------TGC------GTGTCTG-TGTTGACAA-AATACAAC---A------AATCGGAGCG-----AAAACAGGAAGTGTGTGAACGATAAAACATATA--GA-------------------------------------
droFic1 scf7180000454066:1727421-1727648 + A-ACAACTGATCAGTGCGGATAAT-AAGAAAATAGCAATTCAAAATTAAATGGTAAAC---------------------------------AAAACATCAT---TTAGCACGGC--------------------CAATT-------A-------------------------------G--A----------------------CGG--AGAGA--T---TTGCCAGTGAAAGC---T--AGAA-------CACTC--TCTCGA---AT--------GAC----------------AGTG--------TGTGTGTGT--G----TC----------TGCGTTTGTG------------------TGC------GTGTCTG-TGTTGACAA-AATACAAC---A------AATCGCAGCAA----AAAACAGGAAGTGTGTGAACGATAAAACATAAA--GA-------------------------------------
droKik1 scf7180000302817:331501-331731 - ACACACAGGATCGGTGCGGATAAT-AGGAAT-ATA-TATACAAAATTAAATGGTAAAC---------------------------------CA-GCGGCAA---TCGGA----------------------------------------------------------------------TCGCAGCGATCGAACAATTTGTTTTCG--------------------GTGAAAGCAGCCAGAGAACGAG---CACTC--TCTT----CG--TTGG-----CT--------G------TGCGTGTGT--------GTGT--GCG--------------------TGCGTGCA----------------T------GTCTGTG-TGTTGACAAAAATACAAC---A------AATCGCAGCG-----AAAACAGGAAGTGTGTGAGCGATAAAACATAAA--G--------------------------------------
droAna3 scaffold_13266:17189395-17189633 - ACACTCCAGCGCCGAGCGGTTAAT-AAGAAA-A--CACACACGAATTAAATGGTAATT---------------------------------AA-ACGGCAG---TTGGAACAACAAGCTAGCAGGCGGGGCGACTGACT-------AGCTACC------G-------------------AC-----------------------------------G--TCGGACGGTGAAAGC---CAAAGAA---------CG-----TCGC---C------------A--------C------GGCGGGTGT--------GTGT--GTG--------------------TGTG------------------TGC------GAGTCTG-TGTTGACAAAAATACAAC---A------AATCGCAGCGAATCGAAAACAGGAAGTGTGTAAAAGATAAAACATGAA--GA-------------------------------------
droBip1 scf7180000396735:454342-454564 - ACACTCCAGCGCCGAGCGGTTAAT-AAGAAA-A--CACACACGAATTAAATGGTAATT---------------------------------AG-AGGCCAG---TTGGAACAACAAGCTTGCTGGCGGGGC----G-------CTCAGCCACC------G-------------------AC-----------------------------------G--TCGGATGGTGAAAGC---CAAAGAACGTA--------------GC---C------------A--------C-------------GC--------GCGT--GTA--------------------TGTG------------------TGC------GAGTCTG-TGTTGACAAAAATACAAC---A------AATCGTAGCG-----AAAACAGGAAGTGGGTGAAAGATAAAACATGAA--GA-------------------------------------
dp5 3:12121911-12122147 + ACAC--TTGAATGGTGTTTTTTGTTAAAAGT-T-TAAGCACAAAATTAAATGGTAAAT---------------------------------GC-CCT-------------CAAT--------------------TCTTT---C-----------------ACCCAGTACACACTTAAAA--C----------------------TGGGCA--GAATC---TCGGGAGTGAAAGC---CAAAGAACAAA----ACTT--TCTGGT-------TGG-----CA-T-----C-------AGT---AGT--------GTGT--GCT--------------------TGTG------------------TGC------GTGTCTG-TGTTGACAAAAATACAAC---AAAATCAAACGGCAGCG-----AAAACAGGAAGTGTACGAGAGATAAAACATAAA-----------------------------------------
droPer2 scaffold_44:305546-305809 + ACAC--TTGAATGGTGTTTTTTGTTAAAAGT-T-TAAGCACAAAATTAAATGGTAAAT---------------------------------CC-CCT-------------CAAT--------------------TCTTT---C-----------------ACCCAGTACACACTTAAAA--C----------------------TGGGCA--GAATC---TCGGGAGTGAAAGC---CAAAGAACAAA----ACTT--TCTGGT-------TGG-----CA-T-----C-------AGT---AGT--------GTGT--GCT--------------------TGTG------------------TGC------GTGTCTG-TGTTGACAAAAATACAAC---AAAATCAAAACGCAGCG-----AAAACAGGAAGTGTACGAGAGATAAAACATAAA--GAGCACTCACCAGCAAGGAATTTATAA------------
droWil2 scf2_1100000004514:1097304-1097447 - T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTG--------TGCGTGTGT------GTTAGCATTGTAAA-TG----T----ATGTTTGTGTGTGCATGA--GTGTCGGTTAG-TGTTGACAAAATTACAACAACAAAAGCAAAATGCTACA-----AAAACAGGAAGTTGATGAA-GATAAAATAAAAA--TA------------------------AAAAAAAAACATC
droVir3 scaffold_12875:6105131-6105345 + ----------------------------------------CAAAATTAAATGGTAAT----------------------------------AA-GCG-------------CAAT--------------------TTTTGAAA-CTGCGGCATAACAGCCCAAACAGCAAAA-------A--C----------------------T--------A--G---AAAACAGTGAAAGC---ACCAGAACAAA----ACGC--TATG--------------CGTTTG--------------T----------------GTAT--GTG------------------TGTGAGTGCATGTCTGTATG----TAAGCG--TGAGTGAG-TGTTGACAAAAATAAAAA---A------AGTCAAAGCAAAATCAAAACAGGAAGTGTATATAAGATAA-ACACAA---GG-------------------------------------
droGri2 scaffold_15112:1005767-1006002 + ----------------------------------------CAAAATTAAATGGTAATAAGCACAATAAACCATATACACCAAATGTAAAACAAAACAAACA---TCAGCAAA------------------------------------------------------------------GCTG----------------------CAG--A------------GACAGTGAAAGCAGGC--AGAACAAAACGCATTG--TGT---TT---------------ATGTGTGCGTGAGTGCGT--------------GTGTGTGTGCGTGC---------TGTG----TGTGTG--------------TATGAG--TGAGTGAGCTGTTGACAAAAATACAAA---AAAA--AAATCGCAGCAAAATCAAAACAGGAAGTGCA----AGATAAAA----AG--GA-------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACATAACCGATCAGTGCGGATAAT-AAGAAT-TGGCAATTCAAAATTAAATGGTAAAC---------------------------------AA-ACGTTGG---TCAGAGCGGT--------------------TAATTAAA-CTTAACCCCA------GGG-----------------ACG----------------------CGG--AGAGA--G---TGGCCAGTGAAAGC---C--AGAA-------CACTC--TCT---TTCG--TCGGACCGTTTG--------------TGTG--------TGCGTGTGT------GTTA---------CGTG----TGTGCG--------------TAT------GTGTCTG-TGTTGACAA-AATACAAC---A------AATCGCAGCG-----AAAACAGGAAGTGTACGAACGATAAAGCATAA---GA-------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................CGGATAAT-AAGAAT-TGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000000000000000
......................................................AAAC---------------------------------AA-ACGTTGG---TCAGAGCGGT--------------------T...........................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
.......................................................AAC---------------------------------AA-ACGTTGG---TCAGAG....................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
........................................................................................................................................................A------GGG-----------------ACG----------------------CGG--AGAGA--G---TGG...................................................................................................................................................................................................................................................................................1911.00100000000000001000
............................................................................................................................................................................................................................................................ACTC--TCT---TTCG--TCGGACCG............................................................................................................................................................................................................................1911.00100001000000000000
...................................................................................................................................................................................................................................................................CT---TTCG--TCGGACCGTTTG--------------TGTG--------TGCGT.........................................................................................................................................................................................2711.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CAGCG-----AAAACAGGAAGTGTACGAAC......................................................2511.00101000000000000000
.......................................................AAC---------------------------------AA-ACGTTGG---TCAGAGCGG.................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000010000
..................................................................................................................................................................................................................................................AA-------CACTC--TCT---TTCG--TCGGACCGTT..........................................................................................................................................................................................................................2411.00110000000000000000
droSec2
ACATAACCGATCAGTGCGGATAAT-AAGAAT-TGGCAATTCAAAATTAAATGGTAAAC---------------------------------AA-ACGTTGG---TCAGAGCGGT--------------------TAATTAAA-CTTAACCCCA------GGG-----------------ACG----------------------CGG--AGAGA--G---TGGCCAGTGAAAGC---C--AGAA-------CACTC--TCT---TTCG--TCGGACCGTTTA--------------TGTG--------TGTGTGTGT------GTTA---------CGTG----TGTGCG--------------TAT------GTGTCTG-TGTTGACAA-AATACAAC---A------AATCGCAGCG-----AAAACAGGAAGTGTACGAACGATAAAGCATAA---GA-------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGCG-----AAAACAGGAAG...............................................................1811.0010001
.......................................................AAC---------------------------------AA-ACGTTGG---TCAGAGCGGT--------------------............................................................................................................................................................................................................................................................................................................................................................................2211.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGCG-----AAAACAGGAAGTG.............................................................2011.0010001
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCAGCG-----AAAACAGGAAGTG.............................................................2211.0010001
....................................................................................................................................................................................................................................................................................CGTTTA--------------TGTG--------TGTGTGTG......................................................................................................................................................................................1840.2510001
dm3
ACATAACCGATCAGTGCGGATAAT-AAGAAT-TGGCAATTCAAAATTAAATGGTAAAC---------------------------------GA-ACGT-------CGGCGCGAT--------------------TAATTAAA-CTCAACCATA------GGA-----------------ACG----------------------CGG--AGAGA--G---TGGCCAGTGAAAGC---C--AGAA-------CACTC--TCT---TTCG--TCGGAGCGTC----------------TGTG--------TGTGTGTGT------GTTA---------CGTG----TGTGCG--------------TAT------GTGTCTG-TGTTGACAA-AATACAAC---A------AATCGCAGCG-----AAAACAGGAAGTGTACGAACGATAAAGCATAA---GA-------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................TAAAC---------------------------------GA-ACGT-------CGGCGCGAT--------------------............................................................................................................................................................................................................................................................................................................................................................................2016.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGCG-----AAAACAGGAAGTG.............................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001001000000000000000000
......................................................................................................................................................................................................................................AAGC---C--AGAA-------CACTC--TCT---TTCG--....................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AGTGCGGATAAT-AAGAAT-TGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CAGCG-----AAAACAGGAAGTG.............................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000000000000000000000000000000010000000000000000
.........ATCAGTGCGGATAAT-AAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................GA-----------------ACG----------------------CGG--AGAGA--G---TGGCCAG...............................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ATCAGTGCGGATAAT-AAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCG-----AAAACAGGAAGTG.............................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000000000000000000000000000000000
..........TCAGTGCGGATAAT-AAGAAT-TGGCAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TG--------TGTGTGTGT------GTTA---------CGTG----T.........................................................................................................................................................2021.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
......................................................................................................................................................ATA------GGA-----------------ACG----------------------CGG--AGAGA--G---......................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
......................................................................................................................................................................................................................................................................................................................................A---------CGTG----TGTGCG--------------TAT------GTGTCTG-.....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AATGGTAAAC---------------------------------GA-ACGT-------CGGCGCGAT--------------------............................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGCG-----AAAACAGGAAGT..............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.....................................................................................................................................................CATA------GGA-----------------ACG----------------------CGG--AGAGA--G---T.....................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.............................................................................................................................................A-CTCAACCATA------GGA-----------------ACG----------------------CGG--AGAGA--G---T.....................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................GAGCGTC----------------TGTG--------TGTGTGTGT------...............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AATCGCAGCG-----AAAACAGGAA................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AGTGCGGATAAT-AAGAAT-TGGCAATTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TGT------GTTA---------CGTG----TGTGCG--------------TAT------G............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
...TAACCGATCAGTGCGGATAAT-.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................CTC--TCT---TTCG--TCGGAGCGTC----------------TGTG--------..............................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................GTGCG--------------TAT------GTGTCTG-TGTTGACAA-AATA.......................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........CAGTGCGGATAAT-AAGAAT-TGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................G--AGAGA--G---TGGCCAGTGAAA..........................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................AAAC---------------------------------GA-ACGT-------CGGCGCGAT--------------------............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................G--AGAGA--G---TGGCCAGTGAAAG.........................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.......................T-AAGAAT-TGGCAATTCAAAATTAAATGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TAAATGGTAAAC---------------------------------GA-ACGT-------CGG......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................ATA------GGA-----------------ACG----------------------CGG--AGAGA--G---TGGC..................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAACGATAAAGCATAA---.......................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................T-------CGGCGCGAT--------------------TAATTAAA-CT.................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........GATCAGTGCGGATAAT-AA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................TGGTAAAC---------------------------------GA-ACGT-------CGGC.....................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACAGGAAGTGTACGAACG.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.........................AAGAAT-TGGCAATTCAAAATTAAATGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GCG-----AAAACAGGAAGTGTACG.........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TGTCTG-TGTTGACAA-AATAC......................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................AA-AATACAAC---A------AATCGCAGCG-----..........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................CG--------------TAT------GTGTCTG-TGTTGACAA-A..........................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGAAGTGTACGAACGAT...................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................AAATGGTAAAC---------------------------------GA-ACGT-------CGGC.....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............TGCGGATAAT-AAGAAT-TGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................GGTAAAC---------------------------------GA-ACGT-------CGGCGCGAT--------------------T...........................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
........................................CAAAATTAAATGGTAAAC---------------------------------G......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGCG-----AAAACAGGAAG...............................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................TAAT-AAGAAT-TGGCAATTCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................TAAATGGTAAAC---------------------------------GA-ACGT-------C........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................G-----AAAACAGGAAGTGTACGAA.......................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.............................................................................................................................................................................................................................................................CTC--TCT---TTCG--TCGGAGCGTC----------------C.........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........ATCAGTGCGGATAAT-AAGAAT-TGGCAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ACCGATCAGTGCGGATAAT-AA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TCTG-TGTTGACAA-AATACAAC---A------A........................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CAGTGCGGATAAT-AAGAAT-..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTACGAACGATAAAGCATA...........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.................................................................................................................................................CAACCATA------GGA-----------------ACG----------------------CGG--AGAGA--G---......................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGTACGAACGATAAAGCATAT---C......................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................AATTAAATGGTAAAC---------------------------------GA-ACGT-------.........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................A-----------------ACG----------------------CGG--AGAGA--G---TGGCCAGTG.............................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TC--TCT---TTCG--TCGGAGCGTC----------------TGTG--------..............................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........GATCAGTGCGGATAAT-AAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TGTG--------TGTGTGTGT------GTTA---------CG................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................AGCGTC----------------TGTG--------TGTGTGTG......................................................................................................................................................................................1840.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CAGCG-----AAAACAGGAAGTA.............................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................GAGCGTC----------------TGTG--------TGTGTGTGT------GC.............................................................................................................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ACACAACCGATCAGTGCGGATAAT-AAGAAT-TGGCAAATCAAAATTAAATGGTAAAC---------------------------------AA-ACGTTAG---TCGGCGCGGC--------------------TAATT-------AACCACA------GAG-----------------ACG----------------------CGG--AGAGA--G---TGGCCAGTGAAAGC---C--AGAA-------CACTC--TCTCGC---C------------T--------C------AGCG--------TGTGTGTGT--G----TTA---------CGTG----TGTGCG--------------TAT------GTGTCTG-TGTTGACAA-AATACAAC---A------AATCGCAGCG-----AAAACAGGAAGTGTGTGAACGATAAAGCATAAA--GA-------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................ACG----------------------CGG--AGAGA--G---TGGCCA................................................................................................................................................................................................................................................................................1811.0010010000
.........ATCAGTGCGGATAAT-AAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
droYak3
ACACAACCGATTAGTGCGGATAAT-AAGAAT-TGGCAATTCAAAATTAAATGGTAAAC---------------------------------AA-GCGTTAG---TCGGCGCGGG--------------------TTATT-------AGCCGCA------TAT-----------------ACG----------------------CGG--AGAGA--G---TAGCCAGTGAAAGC---C--AGAA-------CACTC--TC--GC---C------------T--------C------AGCGTGTG----T----GTGT--GTGTGTTA---------CA--------------------------TGT------GTGTCTG-TGTTGACAA-AATACAAC---A------AATCGCAGCG-----AAAACAGGAAGTGTACGAACGATAAAGCATAAA--GA-------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................GATAAT-AAGAAT-TGGCAATTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000020000
................CGGATAAT-AAGAAT-TGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................G-----AAAACAGGAAGTGTACGAACGAT...................................................2411.00100000010000
droEug1
ACACAACCGATCAGTGCGGATAAT-AAGAAT-TGGCAATACAAAATTAAATGGTAAAC---------------------------------AA-ACGTTTGAATTCGAAGGGGC--------------------TAATT-------A-------------------------------A--C----------------------CGT--ACAGA--G---TAGCCAGTGAAAGC---A--AGAA-------TACTC--TCTCGG---CT--------CCG----------------A--GTGTGTGTGTGTGTGGTT------GTAA---------C-TG----TATGCG----------------T------GTGTCTG-TGTTGACAA-AATACAAC---A------AATCGCAGCG-----AAAACAGGAAGTGTGTGAACGATAAAACATAAA--GA-------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
ACTCAAGCGGTCAGCGTGGATAAT-AGGAAT-TGGCAGTACAAAATTAAATGGTAAAC---------------------------------AG-AGGCTGG---TCGGCGTGGC--------------------TGATG--------------------GGG-----------------GCG----------------------CAG--CGAGC--G---TGGCCAGTGAAAGC---C--AGAA-------CGCTCGCTCT---CTCG--CTCGGCTGCC----------------AGAG--------TGCGTGAGT--GT------------------G----TGTGCG--------------TGT------GCGTCTG-TGTTGACAA-AATACAAC---A------AATCGCAGCG-----AAAACAGGAAGTGTGTGGACGATAAAGCATAAA--GA-------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ACACAACCGATCGGCGTGGATAAT-AAGAAT-TGGCAGTACTAAATTAAATGGTAAAC---------------------------------AA-ACATTAG---ACGGCGTGGC--------------------TAAA-----------CGCA------GGG------------------TG----------------------AGG--AGAGA--GCG-GGACGAGTGAAAGC---C--AGAA-------CACTC--TCTCGC---CTGCCCGTGTGCG----------------TGTT--------TGTGTGTGT--GTG----------------TG----TGTGCG----------------T------TCGTGTG-TGTTGACAA-AATACAAC---A------AATCGCAGCG-----AAAACAGGAAGTGTGTGAACGATAAAACATAAA--GA-------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ACCGACTCGATAAGTGCGGAAACT-AAGAGT-TAGCAGTACAAAATTAAATGGTAACC---------------------------------AA-ACGCAAG---TGGCCGGGAC--------------------TAATT-------G-------------------------------A--C----------------------TGG--AGAGA--G---TAGACAGTGAAAGC---C--AGAA-------CACTT--TCTGGC------------TGCA----------------AGGG--------TGTGTGTGT--GTG----------------TG----TGTGCG----------------T------TTGTCTG-TGTTGACAA-AATACAAC---A------AATCGCAGCG-----AAAACAGGAAGTGTGTGAACGATAAAACATAAAAAGA-------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
ACACAACCGATAAGTGCGAATAAT-AAGGGT-T-ACAATACTAAATTAAATGGTAAAC---------------------------------AA-ACGCAT----ATGGCCGGAC--------------------TAAAA-------A-------------------------------T--C----------------------TGG--ATAGA--G---TAGACAGTGAAAGC---C--AGAA-------CCCTC--TCTGGA---AT--------GC----------------------------------GAGT--GTG--------------------TGTG------------------TGC------GTGTCTG-TGTTGACAA-AATACAAC---A------AATCGGAGCG-----AAAACAGGAAGTGTGTGAACGATAAAACATATA--GA-------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
A-ACAACTGATCAGTGCGGATAAT-AAGAAAATAGCAATTCAAAATTAAATGGTAAAC---------------------------------AAAACATCAT---TTAGCACGGC--------------------CAATT-------A-------------------------------G--A----------------------CGG--AGAGA--T---TTGCCAGTGAAAGC---T--AGAA-------CACTC--TCTCGA---AT--------GAC----------------AGTG--------TGTGTGTGT--G----TC----------TGCGTTTGTG------------------TGC------GTGTCTG-TGTTGACAA-AATACAAC---A------AATCGCAGCAA----AAAACAGGAAGTGTGTGAACGATAAAACATAAA--GA-------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
ACACACAGGATCGGTGCGGATAAT-AGGAAT-ATA-TATACAAAATTAAATGGTAAAC---------------------------------CA-GCGGCAA---TCGGA----------------------------------------------------------------------TCGCAGCGATCGAACAATTTGTTTTCG--------------------GTGAAAGCAGCCAGAGAACGAG---CACTC--TCTT----CG--TTGG-----CT--------G------TGCGTGTGT--------GTGT--GCG--------------------TGCGTGCA----------------T------GTCTGTG-TGTTGACAAAAATACAAC---A------AATCGCAGCG-----AAAACAGGAAGTGTGTGAGCGATAAAACATAAA--G--------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
ACACTCCAGCGCCGAGCGGTTAAT-AAGAAA-A--CACACACGAATTAAATGGTAATT---------------------------------AA-ACGGCAG---TTGGAACAACAAGCTAGCAGGCGGGGCGACTGACT-------AGCTACC------G-------------------AC-----------------------------------G--TCGGACGGTGAAAGC---CAAAGAA---------CG-----TCGC---C------------A--------C------GGCGGGTGT--------GTGT--GTG--------------------TGTG------------------TGC------GAGTCTG-TGTTGACAAAAATACAAC---A------AATCGCAGCGAATCGAAAACAGGAAGTGTGTAAAAGATAAAACATGAA--GA-------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................................................................................GTGT--GTG--------------------TGTG------------------TGC------GAGTCTG-.....................................................................................................................2111.001100000
droBip1
ACACTCCAGCGCCGAGCGGTTAAT-AAGAAA-A--CACACACGAATTAAATGGTAATT---------------------------------AG-AGGCCAG---TTGGAACAACAAGCTTGCTGGCGGGGC----G-------CTCAGCCACC------G-------------------AC-----------------------------------G--TCGGATGGTGAAAGC---CAAAGAACGTA--------------GC---C------------A--------C-------------GC--------GCGT--GTA--------------------TGTG------------------TGC------GAGTCTG-TGTTGACAAAAATACAAC---A------AATCGTAGCG-----AAAACAGGAAGTGGGTGAAAGATAAAACATGAA--GA-------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
ACAC--TTGAATGGTGTTTTTTGTTAAAAGT-T-TAAGCACAAAATTAAATGGTAAAT---------------------------------GC-CCT-------------CAAT--------------------TCTTT---C-----------------ACCCAGTACACACTTAAAA--C----------------------TGGGCA--GAATC---TCGGGAGTGAAAGC---CAAAGAACAAA----ACTT--TCTGGT-------TGG-----CA-T-----C-------AGT---AGT--------GTGT--GCT--------------------TGTG------------------TGC------GTGTCTG-TGTTGACAAAAATACAAC---AAAATCAAACGGCAGCG-----AAAACAGGAAGTGTACGAGAGATAAAACATAAA-----------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................AGAACAAA----ACTT--TCTGGT-------TGG-----...........................................................................................................................................................................................................................2112.0020200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAGGAAGTGTACGAGAGA....................................................2111.0010000001000
......................................................................................................................................................................................................................ATC---TCGGGAGTGAAAGC---CAAA.................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................................................................................................................................................................T-----C-------AGT---AGT--------GTGT--GCT--------------------TGTG------------------TG....................................................................................................................................2111.0010000001000
..........................................................................................................................................................................................................................................................................................................................TGT--GCT--------------------TGTG------------------TGC------GTGTCTG-TG...................................................................................................................2211.0010100000000
..........................................................................................................................................................................................................................................................................................................T---AGT--------GTGT--GCT--------------------TGTG------------------TGC------GT...........................................................................................................................2011.0010100000000
.................................................................................................................................................................................................................................................GAACAAA----ACTT--TCTGGT-------TGG-----...........................................................................................................................................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................T--TCTGGT-------TGG-----CA-T-----C-------AGT---AGT--------G........................................................................................................................................................................................2111.0010100000000
..............................................................................................................CAAT--------------------TCTTT---C-----------------ACCCAGTACAC.......................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................GTGT--GCT--------------------TGTG------------------TGC------GTGTCTG-T....................................................................................................................2211.0010100000000
...............................................................................................................................................................................AAAA--C----------------------TGGGCA--GAATC---TCGGGA................................................................................................................................................................................................................................................................................2211.0010000000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................G-----AAAACAGGAAGTGTACGAGA......................................................2111.0010100000000
............................................................................................................................................................................................................................................................ACTT--TCTGGT-------TGG-----CA-T-----C-------AGT---A...................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................TGGGCA--GAATC---TCGGGAGTG.............................................................................................................................................................................................................................................................................2011.0010100000000
........................................................................................................................................................................CACACTTAAAA--C----------------------TGGGCA--GAATC---TCGG..................................................................................................................................................................................................................................................................................2711.0010010000000
...............................................................................................................................................................................................................................................AAGAACAAA----ACTT--TCTGGT-------TG.................................................................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................................................................................C-------AGT---AGT--------GTGT--GCT--------------------TGTG------------------TGC------.............................................................................................................................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACAGGAAGTGTACGAGAG.....................................................2111.0010100000000
droPer2
ACAC--TTGAATGGTGTTTTTTGTTAAAAGT-T-TAAGCACAAAATTAAATGGTAAAT---------------------------------CC-CCT-------------CAAT--------------------TCTTT---C-----------------ACCCAGTACACACTTAAAA--C----------------------TGGGCA--GAATC---TCGGGAGTGAAAGC---CAAAGAACAAA----ACTT--TCTGGT-------TGG-----CA-T-----C-------AGT---AGT--------GTGT--GCT--------------------TGTG------------------TGC------GTGTCTG-TGTTGACAAAAATACAAC---AAAATCAAAACGCAGCG-----AAAACAGGAAGTGTACGAGAGATAAAACATAAA--GAGCACTCACCAGCAAGGAATTTATAA------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTG--------TGCGTGTGT------GTTAGCATTGTAAA-TG----T----ATGTTTGTGTGTGCATGA--GTGTCGGTTAG-TGTTGACAAAATTACAACAACAAAAGCAAAATGCTACA-----AAAACAGGAAGTTGATGAA-GATAAAATAAAAA--TA------------------------AAAAAAAAACATCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
----------------------------------------CAAAATTAAATGGTAAT----------------------------------AA-GCG-------------CAAT--------------------TTTTGAAA-CTGCGGCATAACAGCCCAAACAGCAAAA-------A--C----------------------T--------A--G---AAAACAGTGAAAGC---ACCAGAACAAA----ACGC--TATG--------------CGTTTG--------------T----------------GTAT--GTG------------------TGTGAGTGCATGTCTGTATG----TAAGCG--TGAGTGAG-TGTTGACAAAAATAAAAA---A------AGTCAAAGCAAAATCAAAACAGGAAGTGTATATAAGATAA-ACACAA---GG-------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................TG------------------TGTGAGTGCATGTCTGTAT...........................................................................................................................................2111.001000000001000000000000000000000000000000000000000000000000000000
........................................................T----------------------------------AA-GCG-------------CAAT--------------------TTTTGAAA-CTG................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
droGri2
----------------------------------------CAAAATTAAATGGTAATAAGCACAATAAACCATATACACCAAATGTAAAACAAAACAAACA---TCAGCAAA------------------------------------------------------------------GCTG----------------------CAG--A------------GACAGTGAAAGCAGGC--AGAACAAAACGCATTG--TGT---TT---------------ATGTGTGCGTGAGTGCGT--------------GTGTGTGTGCGTGC---------TGTG----TGTGTG--------------TATGAG--TGAGTGAGCTGTTGACAAAAATACAAA---AAAA--AAATCGCAGCAAAATCAAAACAGGAAGTGCA----AGATAAAA----AG--GA-------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 12:50 PM