ID:

dsi_9812

 Coordinate:

2l:2106851-2106990 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.7 -13.5 -13.4

Flybase annnotation

five_prime_UTR [2l_2107027_2107274_-]; CDS [2l_2106991_2107026_-]; exon [2l_2106991_2107274_-]; exon [2l_2106710_2106850_-]; CDS [2l_2106710_2106850_-]; intron [2l_2106851_2106990_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCAAATTCAAAAAGATGTTGACCTGGACACCACTTGAATCTAATCCCGAGGTAATAACTTTACCAGTAAAGATCTTGGCTACCGCACTTCCAGTTGCACATTCATTGTTTCTTTGTTACAAAATGTCGGCTTCCTTTGGATAATAATGTGAAAAGACGCCATTAAAACCTTCCCATTCCCACTTTTCCAGGTTTTGACCAAGTATATACATAAACTGGGCGTGTCGCCAGCCTGGTCGGT
**************************************************.......(((((....)))))....((((...((((..((((((((.(((((..((((.........)))))))))))))......))))......)))).......)))).............................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 SRR553488
RT_0-2 hours eggs
 M024
male body		 M053
female body
 SRR902009
testis
 O002
Head
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
...............TGTTGACCTGGACACCACTTGAATC........................................................................................................................................................................................................ 25 0 1 4.00 4 3 0 0 1 0 0 0 0 0 0
.......................TGGACACCACTTGAATCTAATCCCGAGGT............................................................................................................................................................................................ 29 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0
.....TTCAAAAAGATGTTGACCTGGACACCACT.............................................................................................................................................................................................................. 29 0 1 3.00 3 2 0 0 0 0 0 0 0 1 0
................................................................AGTAAAGATCTTGGCTAC.............................................................................................................................................................. 18 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
........AAAAAGATGTTGACCTGGACACCACT.............................................................................................................................................................................................................. 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................ACCTTACCAGGTCTTGAC.......................................... 18 3 20 1.80 36 0 0 12 0 23 1 0 0 0 0
.......................TGGACACCACTTGAATCTAATCC.................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......CAAAAAGATGTTGACCTGGACACC................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..............................................................................................................CTTTGTTCCAAAATGTCGGCT............................................................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0
............................................................................................................................................................................................................TATACATAAACTGGGCGTGTCGCCAGCC........ 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.....TTCAAAAAGATGTTGACCTGGACACCACTT............................................................................................................................................................................................................. 30 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TACATAAACTGGGCGTGTCGCCAGCC........ 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................AACTGGGCGTGTCGCCAGC......... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1
.....TTCAAAAAGATGTTGACCTGGACACCAC............................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................TGTTCCAAAATGTCGGCTTC........................................................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................................TGGCGTGTAGCCAGCCTGGT.... 20 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.CAAATTCAAAAAGATGTTGACCTGGAC.................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TTCCAGGTTTTGACCAAG...................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
..........AAAGATGTTGACCTGGACACC................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GGGTGTGACGCCTGCCTGGT.... 20 3 6 0.17 1 0 0 0 1 0 0 0 0 0 0
..............................................................CCTGCAAAGATCTTGGCT................................................................................................................................................................ 18 2 9 0.11 1 0 0 0 0 1 0 0 0 0 0
.............................................................................................................TCTTTGTTGCAAAATCTAGG............................................................................................................... 20 3 12 0.08 1 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................ACTTTACCAGGTCTTGA........................................... 17 2 15 0.07 1 0 1 0 0 0 0 0 0 0 0
...............................................................CAGTTCAGATCTTGGCT................................................................................................................................................................ 17 2 18 0.06 1 0 0 0 1 0 0 0 0 0 0
............................................CCCGAGGTAATGACTA.................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................................CGGAGTGTGGCCAGCCTGG..... 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

GGTTTAAGTTTTTCTACAACTGGACCTGTGGTGAACTTAGATTAGGGCTCCATTATTGAAATGGTCATTTCTAGAACCGATGGCGTGAAGGTCAACGTGTAAGTAACAAAGAAACAATGTTTTACAGCCGAAGGAAACCTATTATTACACTTTTCTGCGGTAATTTTGGAAGGGTAAGGGTGAAAAGGTCCAAAACTGGTTCATATATGTATTTGACCCGCACAGCGGTCGGACCAGCCA
**************************************************.......(((((....)))))....((((...((((..((((((((.(((((..((((.........)))))))))))))......))))......)))).......)))).............................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR618934
dsim w501 ovaries
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 M024
male body		 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
..........................TGTGGTGAACTTAGATTAGGGC................................................................................................................................................................................................ 22 0 1 2.00 2 2 0 0 0 0 0 0 0
.........................................................................................................................................................................TAGGGTAAGGGTGAAAAGGT................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................................................................TTTGGAAGGGTAAGGGTGAAA....................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................TTGGAAGGGTAAGGGTGAAAA...................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................CGAAGGAAACCTATTATTACAC.......................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0
......................................................ATTGAAATGGTCAGTGCTAG...................................................................................................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0
.....................GGAGCTGGGGTGAACTTAGTT...................................................................................................................................................................................................... 21 3 4 0.50 2 0 0 0 0 2 0 0 0
.........................................TTAGGGCTAAATTATTGAAA................................................................................................................................................................................... 20 2 2 0.50 1 0 0 0 1 0 0 0 0
............................................................ATGGTCAGTTCTGGAATCGA................................................................................................................................................................ 20 3 4 0.25 1 0 0 0 0 0 1 0 0
...................................................................................................................................................................TTTTAGTAGGGTAAGGGTAAAA....................................................... 22 3 4 0.25 1 0 0 0 0 0 0 0 1
.....................................................................................AGAAGGTCAACGTGTA........................................................................................................................................... 16 1 6 0.17 1 0 0 0 1 0 0 0 0
.............................................................TGGTCAGTTCTGGAATCGA................................................................................................................................................................ 19 3 13 0.15 2 0 0 0 0 0 2 0 0
.............................................................................CAATGGCGTGAAGGT.................................................................................................................................................... 15 1 7 0.14 1 0 0 0 0 0 0 1 0
...............ACTGCTGGACCTGTAGTGA.............................................................................................................................................................................................................. 19 3 14 0.07 1 0 0 0 0 0 0 1 0
..........................................................AAAGTTTCATTTCTAGAACC.................................................................................................................................................................. 20 3 14 0.07 1 0 0 0 0 0 0 1 0
...........................................................................................................................................................................................................TATATGTATGTGGCCCG.................... 17 2 18 0.06 1 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:2106801-2107040 - dsi_9812 CCA-AA----------TTC---------------AAA--AAGATGTTGACCTGGACACCACTTGAATCTAATCCCGAGGTAAT-------------AACTTTACCA----GTA---AAGATCTTGGCTAC----------------------CGCACTT------------CC--------AGT---TGCA--CATTC-A-TTGTT-------------T-CTT-T---GTTACAAAATGT-CGGCTTCCTTT-GG---------------------ATAATAATG--------TGAAAAGACGCCATTAAA--------------------------ACC-TTCCCATTCCCACTTT------------------------TCCAGGTTTTGACCAAGTATATACATAAACTGGGCGTGTCGCCAGCCTGGTCGGT
droSec2 scaffold_10916:631-870 - CCA-AA----------TTC---------------AAA--AAGATGTTGACCTGGACACCACTTGAATCTAATCCCGAGGTAAT-------------GACTTTACCA----GTA---AAGATTTTGCCTAC----------------------CGCACTT------------CC--------AGT---TGCA--CATTC-A-TTGTT-------------T-CTT-T---GTTCCAAAATGT-CGGCTTCCTTT-GG---------------------ATAATAATG--------TGAAAAGACGCCATTAAA--------------------------ACC-TTCCCATTCCCACTTT------------------------TTCAGGTTTTGACCAAGTATATACATAAACTGGGCGTGTCGCCAGCCTGGTCGGT
dm3 chr2L:2213707-2213945 - CCA-AA----------TTC---------------AAA--AATATGTTAACCTGGACGCCACTTGAATCTAATCCCGAGGTAAT-------------GACTTTACCT----GTA---AAGGTTTTGCCTAC----------------------CGCACTT------------CC--------AGTTTTTGCA--CATTC-A-TTGTT-------------T-CTT-T---GTTCCAAAATGT-CGGATT----T-GG---------------------ATAATAAAG--------TTAAAAGACGCCATTAAG--------------------------ACC-TTCCCATTCCCACTTT------------------------TCCAGGTTTTGACCAAGTACATACATAAACTGGGCGTGTCGCCAGCCTGGTCGGT
droEre2 scaffold_4929:2248443-2248686 - CCA-AAA--------ATTT---------------GAA--AATATGTTGACCTGGACACCACTTGAATCTAATCCCGAGGTAAC-------------GACTTTACCA----CCG---AAGGCTTTGTTTAA----------------------AGCAGTT------------CT--------AGTTTTTACA--AATTC-A-TGGTT-------------T-CTT-T---GTCCCAAAATGT-CGGCTTCCTTT-GG---------------------GTAATAAAG--------TAGAAAGACGCCATTAAA--------------------------TT--TTCCCATTCCCGCTTT------------------------TAAAGGTTTTGACCAAGTACATACATAAATTGGGCGTGTCGCCAGCCTGGTCGGT
droYak3 2L:2186454-2186694 - CCA-AA----------TTC---------------GGA--AAAATGTTGACCTGGACACCACTAGAATCTAATCCCGAGGTAAC-------------GACTTCACCA----GTT---AAGGATTTTTT------------------------TAGCACTT------------CC--------AGTTTTAGCA--AATTC-A-TGGCT-------------T-CTT-T---GTGCCAAAATGT-CGGCTTCCTTTTGG---------------------GTAATAAAG--------TGAAAAGACGCCATTAAA--------------------------TT--TTCCCATTCCCACTTT------------------------TCCAGGTTTTGACCAAGTACATACATAAATTGGGCGTGTCGCCAGCCTGGTCGGT
droEug1 scf7180000409554:3989133-3989366 - CTA-AA----------TTC---------------AAAAGGTAATGATGAGTTTGACTCCGCTTGAATCCAATCCAGAGGTAAG-------------AAACTCAAAT----CTA---AAG----GAAC---T-------------------ATAATAATT------------GC--------AAAT-TCGCA--AAT-GCTT-T---------CTTGTTG--T--TT---TTGCAAAAATGT-CGGCTTCCTAT-TG---------------------ATAATAAAG--------TAAAAAGACGGCAATAAA--------------------------CTG-TACCCATTC--------------------------------CCAGGTCTTGACCAAGTATATACATAAATTGGGCGTGTCGCCGGCTTGGTCTGT
droBia1 scf7180000301500:59167-59403 + CTA-AAT---------TCC---------------AGA--AAAATGTCGACCTGGACGCCTCTTGAATCCAACCCGGAGGTAAG-------------AAAATTAGCC----ATT--T-AATGCCGACC---T-------------------TCGGTACTT------------CC--------AGATTTTGCA--ACTTTCT-TTGTT-------------G-CTC-T---TTGCGAAAATGT-CGGTTTCCTTT-AG--------------------TAAAATAGGT--------GGAAAAGACGCCATTAAA--------------------------GT--TTCCCTTTC--------------------------------CCAGGTTCTAACCAAGTACATACATAAACTGGGCGTGTCGCCAGCCTGGTCGGT
droTak1 scf7180000415779:721213-721453 - CCA-AAT---------TCC---------------AGA--AAAATGTCGACCTGGACTCCACTTGAATCCAATCCCGAGGTGAG-------------AATCTAATCC----ATT--TAA--GCCTACT---T-------------------TCCGTACTT------------GC--------AGCACTTGCA--AATTCCTT-T---------GTTGTGG--CTT-T---TTGCGAAAATGT-CGGCTTCCTTT-TG-----------------GGGGAAAATA-AG--------TAAGAAGACGCCATTAAA--------------------------TT--TTCCCATTC--------------------------------CCAGGTCCTGACCAAGTACATACATAAATTGGGCGTGTCGCCAGCCTGGTCGGT
droEle1 scf7180000491273:1066331-1066566 + ATA-AT----------TTC---------------ACA--AAAATGTCAACCTGGACACCACTTGAATCCAATCCAGAGGTGAG-------------TAAGAAAACC----ATT--T-AAAGCCGTAT---T-------------------CCAAGAGTT------------GC--------AGTT-TTGCC-AAA--GTTT-T---------GTTGTTG--CAA-T---TTGCGAAAATGT-GGGCTTCCTTT-GA----------------------AAGTAAAG--------GGATAGGACGCCATTAAC--------------------------TTT-TACCCATTC--------------------------------CCAGGTGCTGACCAAGTATATACATAAATTGGGCGTGTCGCCAGCCTGGTCGGT
droRho1 scf7180000759824:14766-15001 - TAA-AT----------TTC---------------AGA--AAAATGTCAACCTTGACGCCTCTTGAATCTAATCCCGAGGTAAG-------------AATGTTACCC----ATT--T-ATAGCGGAAT---A-------------------TCAGGTGTT------------GC--------AGTT-TTGCA--AAT-GCTT-T---------GTTGTTG--CTA-T---TGGCGAGGATGT-GGGCTTTCTTA-GG---------------------A-ATTTAAG--------TATAAAGACGCCATTAAT--------------------------GTT-TCCCCATTC--------------------------------CCAGGTGCTGACCAAGTACATACATAAATTGGGCGTGTCGCCAGCCTGGTCGGT
droFic1 scf7180000453924:89163-89391 - TGAAAA----------TTC---------------TAA--AAAATGTCGACCTTGACGCCTCTTGAAGCTAACCCCGAGGTAAG-------------AAAAATAAA-----AGATGG-AA-------T---A-------------------CCAATAGTT------------TT--------AGTT-TTGCA--AACTTTT-TTGTT---------TG----TG-CT---TGGCAAAAATGA-CCGCTTCCTTT-GC---------------------AT-TTAAAG--------AGAAAAGACGCCATTAAC--------------------------TT--TTCCCATTC--------------------------------CCAGGTGCTGACCAAGTACATACATAAACTGGGCGTGTCGCCAGCCTGGTCGGT
droKik1 scf7180000302408:465617-465847 - CCA-AATTACAAAAAA--C-------------C-AG---AAAATGTCGACCTGGATACCACTCGAATCCAACCCGGAGGTGAGCATACAAAATAATGACCT-----------------------AGTTTCGC----------------------------------------C--------ATTT-TCGCC--AAT-G------GT-----------TG--T--TG---TTGCAAATATGT-TTGACTCCTTG-GA------------ATT-G----TAATTAAAG--------GGTAAAGACGCCATTTTT--------------------------TG--TGCCCATTC--------------------------------CTAGGTGCTGACCAAGTACATACATAAGCTGGGCGTGTCGCCAGCCTGGTCGGT
droAna3 scaffold_12916:6257971-6258208 + CAA-AA----------TTC-------------T-AGC--AAAATGTCGACCTGGACACCATTGGAATCCAACCCCGAGGTAAGCT---------ATAACCC---------AGCCT-GA--G-------------------------------AATATTT------------GCGTTGGCAAAGTT-TTCCA--AA--G------CT-------------T-TTT-TTTACTGCAAAAAAAA-TTGATTCCTTT-GAA-----------ATT-GGCAAAAATTAACTG-------GAAAAAGACGCAATTTAC--------------------------TC--CT--CATAC-------------------------------TCCAGGTGCTGTCTAAGTACATACATAAATTGGGCGTGTCGCCATCCTGGTCGGT
droBip1 scf7180000396568:571146-571380 - CAA-AA----------TTC-------------T-AGC--AAAATGTCGACCTGGACACCTTTAGAATCCAACCCCGAGGTAAG-------------CTATAAGTCC----AGCCG-GA--GCACAGT---T-------------------TCAATAGCT------------TG--------AACT-TTGCA--AA--G------C------------TT--T--TT---TTGCAAAAA-AT-TTGATTCCTTT-GGA-----------ATT-GGCAAAAATTAACTG-------GAAAAAAACCCAATTTAA--------------------------TT--CT--CATAC-------------------------------TCCAGGTACTGTCTAAGTACATACATAAATTGGGCGTGTCGCCATCCTGGTCGGT
dp5 4_group3:4222885-4223125 + AAA-AA----------TAA---------------AGA--AAAATGTCGACCTGGACGCCACTTGAATCCAACCCCGAGGTAAT-------------TACTATAGTT----ATT--A-AGTGCCTGATTATTC-------------------AAATTTCT------------GC--------AACT--GGGAT-AT-TGGCT-G---------ATTGCCG--G--CA---TTGCAAAAAGTGCTTTGCTCCTTT-GAA-----------ATT-GGC---------AA--------TTATAAGACGCCATTGAT--------------------------ATTGTACCCATTC--------------------------------CTAGGTGCTGACCAAGTACATACACAAGCTAGGCGTGTCGCCTGCCTGGTCGGT
droPer2 scaffold_1:5704243-5704483 + AAA-AA----------TAA---------------AGA--AAAATGTCGACCTGGACGCCACTTGAATCCAACCCCGAGGTAAT-------------TACTATAGTT----ATT--A-AGTGCCTGATTATTC-------------------AAATTTCT------------GC--------AACT--GGGAT-AT-TGGCT-G---------ATTGCCG--G--CA---TTGCAAAAAGTGCTTTGCTCCTTT-GAA-----------ATT-GGC---------AA--------TTATAAGACGCCATTGAT--------------------------ATTGTACCCATTC--------------------------------CTAGGTGCTGACCAAGTACATACACAAGCTAGGCGTGTCGCCTGCCTGGTCGGT
droWil2 scf2_1100000004521:2069826-2070019 + A--------------------------------------AAAATGTCGACCTGGACACCATTGGAATCTAACCCCGAGGTAAG-------------TCTAAGGAGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAAGGGTAATTG-------GT--------CCACGATGGAT---GCGC-----AGACGAA-TT-GAA-TTCCCATTCCAATTTTTAACAATTTTCTGTCTTTTCTTCTTTTAGGTTTTGACCAAGTATATACGCAAGCTGGGCGTGTCGCCGTCTTGGTCGGT
droVir3 scaffold_12963:8437584-8437832 + dvi_10930 TAA-AT----------TTT---------------TTA--AAAATGTCGATCTGGACACCATTGGAATCCAACCCGGAGGTAAG-------------TGGTTATC-----------------------TTTACTAATCTTGTTAACAGTTAACAATGTATGAAAAAA---------------A--GCTTGTA--AT-TT-G-TTGT---------TGCTGTTG--CT---TGGCAAAA-T-T-CGATTTTATTT-CCA-----------ATT-GGC--ATATT------------AAAAAAGACGCCATGATGTCC-----------------------GT--GTCCCATT---------------------------------CCAGGTGCTGACCAAATACATACATAAGCTGGGCGTGTCGTCGGCCTGGTCTGT
droMoj3 scaffold_6500:1047143-1047385 + TAA-AA----------TTT--------TCTTGAAAAC--AAAATGTCGACCTGGACACCATTGGAATCCAACCCAGAGGTAAT-------------AAACTAAC-----------------------TTTACT----CTGTT-----------------GAGAAATTATTTGC--------------------AT-TTGCC-A---------TCTGCCG----------------TTACGA-CGCACTTCTGT-GAATTTGATTTGCAATTTGTC-----ATA--TT-------GAAAGAGACGCCATGTTGA---TTGCTC----------------GT--AACCCATTC--------------------------------CCAGGTACTGACCAAATACATACACAAGCTGGGTGTGTCGCCATCCTGGTCAAT
droGri2 scaffold_15252:11594584-11594826 + CAA-AT----------ATTAAATTTTTTC-----TTC--AAAATGTCAATCTGGACACCATTGGAATCTAACCCGGAGGTGAG-------------AGCTTATCGAAGCT--A---AAC----G------------------------------------------------------------------A--AATTC-A-TTGTCCCCAAAGCGAGCA--G--CA---ATGCA-------------ACCATT-AA---------------------ATAA--ACTTGAAAATCAAAAAAGACGCCATTATGTCGATGTCCCGTTAT-----ATTTGCTA--TTCCCATT---------------------------------CCAGGTGCTGACCAAATACATACACAAGCTGGGCGTGTCGCCGTCCTGGTCGGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCA-AA----------TTC---------------AAA--AAGATGTTGACCTGGACACCACTTGAATCTAATCCCGAGGTAAT-------------AACTTTACCA----GTA---AAGATCTTGGCTAC----------------------CGCACTT------------CC--------AGT---TGCA--CATTC-A-TTGTT-------------T-CTT-T---GTTACAAAATGT-CGGCTTCCTTT-GG---------------------ATAATAATG--------TGAAAAGACGCCATTAAA--------------------------ACC-TTCCCATTCCCACTTT------------------------TCCAGGTTTTGACCAAGTATATACATAAACTGGGCGTGTCGCCAGCCTGGTCGGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................TGTTGACCTGGACACCACTTGAATC.................................................................................................................................................................................................................................................................................................................................................................................2514.00400000003010000000
...................................................TGGACACCACTTGAATCTAATCCCGAGGT.....................................................................................................................................................................................................................................................................................................................................................................2913.00300000012000000000
................TTC---------------AAA--AAGATGTTGACCTGGACACCACT.......................................................................................................................................................................................................................................................................................................................................................................................2913.00300000002100000000
.........................................................................................................A----GTA---AAGATCTTGGCTAC----------------------.............................................................................................................................................................................................................................................................................................1812.00220000000000000000
..................................AAA--AAGATGTTGACCTGGACACCACT.......................................................................................................................................................................................................................................................................................................................................................................................2612.00200000002000000000
...................................................TGGACACCACTTGAATCTAATCC...........................................................................................................................................................................................................................................................................................................................................................................2311.00100000001000000000
..................C---------------AAA--AAGATGTTGACCTGGACACC..........................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TATACATAAACTGGGCGTGTCGCCAGCC........2811.00100010000000000000
................TTC---------------AAA--AAGATGTTGACCTGGACACCACTT......................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TACATAAACTGGGCGTGTCGCCAGCC........2611.00100010000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AACTGGGCGTGTCGCCAGC.........1911.00100000000001000000
................TTC---------------AAA--AAGATGTTGACCTGGACACCAC........................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
.CA-AA----------TTC---------------AAA--AAGATGTTGACCTGGAC.............................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................T------------------------TCCAGGTTTTGACCAAG......................................1811.00100000100000000000
....................................A--AAGATGTTGACCTGGACACC..........................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
droSec2
CCA-AA----------TTC---------------AAA--AAGATGTTGACCTGGACACCACTTGAATCTAATCCCGAGGTAAT-------------GACTTTACCA----GTA---AAGATTTTGCCTAC----------------------CGCACTT------------CC--------AGT---TGCA--CATTC-A-TTGTT-------------T-CTT-T---GTTCCAAAATGT-CGGCTTCCTTT-GG---------------------ATAATAATG--------TGAAAAGACGCCATTAAA--------------------------ACC-TTCCCATTCCCACTTT------------------------TTCAGGTTTTGACCAAGTATATACATAAACTGGGCGTGTCGCCAGCCTGGTCGGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................GTTGACCTGGACACCACTT......................................................................................................................................................................................................................................................................................................................................................................................1920.5010010
................................................................................................................................................................................................................................................................................................................................................................................................................ATATACATAAACTGGGCGTGTCGCCAGC.........2820.5010010
..................C---------------AAA--AAGATGTTGACCTGGAC.............................................................................................................................................................................................................................................................................................................................................................................................2120.5011000
dm3
CCA-AA----------TTC---------------AAA--AATATGTTAACCTGGACGCCACTTGAATCTAATCCCGAGGTAAT-------------GACTTTACCT----GTA---AAGGTTTTGCCTAC----------------------CGCACTT------------CC--------AGTTTTTGCA--CATTC-A-TTGTT-------------T-CTT-T---GTTCCAAAATGT-CGGATT----T-GG---------------------ATAATAAAG--------TTAAAAGACGCCATTAAG--------------------------ACC-TTCCCATTCCCACTTT------------------------TCCAGGTTTTGACCAAGTACATACATAAACTGGGCGTGTCGCCAGCCTGGTCGGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGCGTGTCGCCAGCCTGGTCGGT26114.001400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014
...........................................TGTTAACCTGGACGCCACTTGAATC.................................................................................................................................................................................................................................................................................................................................................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010104000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CGCCACTTGAATCTAATCCCGAGGT.....................................................................................................................................................................................................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTGTCGCCAGCCTGGTCGGT2514.0040000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TACATAAACTGGGCGTGTCG..............2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CATACATAAACTGGGCGTGTCGCCAGCC........2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TTC---------------AAA--AATATGTTAACCTGGACGCC..........................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTGTCGCCAGCCTGGTCG..2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TTC---------------AAA--AATATGTTAACCTGGACGC...........................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................CCTGGACGCCACTTGAATCTA...............................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................ATATGTTAACCTGGACGC...........................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATACATAAACTGGGCGTGTCGCC............2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATACATAAACTGGGCGTGTCG..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................AACCTGGACGCCACTTGAAT..................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CCAAGTACATACATAAACTGGGC....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGTCGCCAGCCTGGTCGGT2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................TC---------------AAA--AATATGTTAACCTGGACGCC..........................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TTAACCTGGACGCCACTTGG....................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGGCGTGTCGCCAGCCTGGTCGGT2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TACATAAACTGGGCGTGT................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TACATAAACTGGGCGTGTCGCCA...........2311.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TAACCTGGACGCCACTTGAA...................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............................................TTAACCTGGACGCCACTTGAATCTAA..............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGGCGTGTCGCCAGCCTGGT....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..A-AA----------TTC---------------AAA--AATATGTTAACCTGG...............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TAAACTGGGCGTGTCGCCAGCCTG......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AACTGGGCGTGTCGCCAGCCTGGTCGG.2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................ACATACATAAACTGGGCGTGTCGCC............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCCAGCCTGGTCGGT1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATACATAAACTGGGCGTGTCGC.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CATAAACTGGGCGTGTCGCCAG..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
........................................................GCCACTTGAATCTAATCCCGAGGTA....................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................AGTACATACATAAACTGGGCGTGTCGC.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CAAGTACATACATAAACTGGGCGTGTC...............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TC---------------AAA--AATATGTTAACCTGGACGC...........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AAA--AATATGTTAACCTGGACGCC..........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGGGCGTGTCGCCAG..........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TC---------------AAA--AATATGTTAACCTGGACGCCAC........................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGCGTGTCGCCAGCCTGGT....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CATAAACTGGGCGTGTCGCCAGCCTGG.....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................ACATACATAAACTGGGCG...................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TACATACATAAACTGGGCGTGTCG..............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CATACATAAACTGGGCGTGTCGCCAGC.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................ATGTTAACCTGGACGCCAC........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..A-AA----------TTC---------------AAA--AATATGTTAA....................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CTTGAATCTAATCCCGAGG......................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTTTGACCAAGTACATACATAAAC.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TACATACATAAACTGGGCGTG.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................C---------------AAA--AATATGTTAACCTGGACGCCT.........................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................ACTTGAATCTAATCCCGAG.......................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..A-AA----------TTC---------------AAA--AATATGTTAACCTGGACGCC..........................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AACTGGGCGTGTCGCCAGCCTGGTCGGT2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................C---------------AAA--AATATGTTAACCTGGACGCCACT.......................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATACATAAACTGGGCGTGTCGCCAGCC........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TCCCATTCCCACTTT------------------------TCCAG..................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TTTGACCAAGTACATACATAAACTGGG.....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TTAACCTGGACGCCACTTGAATCT................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TAAACTGGGCGTGTCGCCAGCCT.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GTACATACATAAACTGGGCGTG.................2211.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................AACCTGGACGCCACTTGAATCT................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..A-AA----------TTC---------------AAA--AATATGTTAACCTGGA..............................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AAGTACATACATAAACTGG......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................ATGTTAACCTGGACGCCACTTGAAT..................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TGGACGCCACTTGAATCTAATCCC..........................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGGCGTGTCGCCAGCCTGGTCGG.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AA----------TTC---------------AAA--AATATGTTAACCTGGACGC...........................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GTACATACATAAACTGGGCG...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGCGTGTCGCCAGCCTGG.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................CCACTTGAATCTAATCCCGAGGTA....................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................ACATACATAAACTGGGCGTGT................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATACATAAACTGGGCGTGTCGCCAGC.........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................GACGCCACTTGAATCTAATCCCGAGGT.....................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................TTC---------------AAA--AATATGTTAACCTGGACGCCACT.......................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AA----------TTC---------------AAA--AATATGTTAACCTGGAC.............................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TACATAAACTGGGCGTGTCGCCAGCCTG......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGGCGTGTCGCCAGCCTGG.....2211.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AAA--AATATGTTAACCTGGA..............................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATACATAAACTGGGCGTG.................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................ACATAAACTGGGCGTGTCG..............1911.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TTCCCACTTT------------------------TCCAGGTTTTGACCAAG......................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TATGTTAACCTGGACGCCACTTG.....................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AAGTACATACATAAACTGGGCGTGTC...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................GTTCCAAAATGT-CGGATT----T-GG---------------------AT..............................................................................................................................................................2311.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGGCGTGTCGCCAGC.........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AAA--AATATGTTAACCTGGACG............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TC---------------AAA--AATATGTTAACCTGGACGCCACT.......................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AAA--AATATGTTAACCTGGAA.............................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CCA-AAA--------ATTT---------------GAA--AATATGTTGACCTGGACACCACTTGAATCTAATCCCGAGGTAAC-------------GACTTTACCA----CCG---AAGGCTTTGTTTAA----------------------AGCAGTT------------CT--------AGTTTTTACA--AATTC-A-TGGTT-------------T-CTT-T---GTCCCAAAATGT-CGGCTTCCTTT-GG---------------------GTAATAAAG--------TAGAAAGACGCCATTAAA--------------------------TT--TTCCCATTCCCGCTTT------------------------TAAAGGTTTTGACCAAGTACATACATAAATTGGGCGTGTCGCCAGCCTGGTCGGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................AATTGGGCGTGTCGCCAGCCTGGTCGG.2711.0010000100
......................................................................................................................................................................................................................................TCCCAAAATGT-CGGCTTCCTT.........................................................................................................................................................................................2111.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGCGTGTCGCCAGCC........1911.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GTACATACATAAATTGGGCGTGT................2311.0010000100
droYak3
CCA-AA----------TTC---------------GGA--AAAATGTTGACCTGGACACCACTAGAATCTAATCCCGAGGTAAC-------------GACTTCACCA----GTT---AAGGATTTTTT------------------------TAGCACTT------------CC--------AGTTTTAGCA--AATTC-A-TGGCT-------------T-CTT-T---GTGCCAAAATGT-CGGCTTCCTTTTGG---------------------GTAATAAAG--------TGAAAAGACGCCATTAAA--------------------------TT--TTCCCATTCCCACTTT------------------------TCCAGGTTTTGACCAAGTACATACATAAATTGGGCGTGTCGCCAGCCTGGTCGGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..A-AA----------TTC---------------GGA--AAAATGTTGACC..................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................TTTTGACCAAGTACATACATAAAT.........................2411.00101000000000
droEug1
CTA-AA----------TTC---------------AAAAGGTAATGATGAGTTTGACTCCGCTTGAATCCAATCCAGAGGTAAG-------------AAACTCAAAT----CTA---AAG----GAAC---T-------------------ATAATAATT------------GC--------AAAT-TCGCA--AAT-GCTT-T---------CTTGTTG--T--TT---TTGCAAAAATGT-CGGCTTCCTAT-TG---------------------ATAATAAAG--------TAAAAAGACGGCAATAAA--------------------------CTG-TACCCATTC--------------------------------CCAGGTCTTGACCAAGTATATACATAAATTGGGCGTGTCGCCGGCTTGGTCTGTSizeHit CountTotal NormTotal
No Reads
droBia1
CTA-AAT---------TCC---------------AGA--AAAATGTCGACCTGGACGCCTCTTGAATCCAACCCGGAGGTAAG-------------AAAATTAGCC----ATT--T-AATGCCGACC---T-------------------TCGGTACTT------------CC--------AGATTTTGCA--ACTTTCT-TTGTT-------------G-CTC-T---TTGCGAAAATGT-CGGTTTCCTTT-AG--------------------TAAAATAGGT--------GGAAAAGACGCCATTAAA--------------------------GT--TTCCCTTTC--------------------------------CCAGGTTCTAACCAAGTACATACATAAACTGGGCGTGTCGCCAGCCTGGTCGGTSizeHit CountTotal NormTotal
No Reads
droTak1
CCA-AAT---------TCC---------------AGA--AAAATGTCGACCTGGACTCCACTTGAATCCAATCCCGAGGTGAG-------------AATCTAATCC----ATT--TAA--GCCTACT---T-------------------TCCGTACTT------------GC--------AGCACTTGCA--AATTCCTT-T---------GTTGTGG--CTT-T---TTGCGAAAATGT-CGGCTTCCTTT-TG-----------------GGGGAAAATA-AG--------TAAGAAGACGCCATTAAA--------------------------TT--TTCCCATTC--------------------------------CCAGGTCCTGACCAAGTACATACATAAATTGGGCGTGTCGCCAGCCTGGTCGGTSizeHit CountTotal NormTotal
No Reads
droEle1
ATA-AT----------TTC---------------ACA--AAAATGTCAACCTGGACACCACTTGAATCCAATCCAGAGGTGAG-------------TAAGAAAACC----ATT--T-AAAGCCGTAT---T-------------------CCAAGAGTT------------GC--------AGTT-TTGCC-AAA--GTTT-T---------GTTGTTG--CAA-T---TTGCGAAAATGT-GGGCTTCCTTT-GA----------------------AAGTAAAG--------GGATAGGACGCCATTAAC--------------------------TTT-TACCCATTC--------------------------------CCAGGTGCTGACCAAGTATATACATAAATTGGGCGTGTCGCCAGCCTGGTCGGTSizeHit CountTotal NormTotal
No Reads
droRho1
TAA-AT----------TTC---------------AGA--AAAATGTCAACCTTGACGCCTCTTGAATCTAATCCCGAGGTAAG-------------AATGTTACCC----ATT--T-ATAGCGGAAT---A-------------------TCAGGTGTT------------GC--------AGTT-TTGCA--AAT-GCTT-T---------GTTGTTG--CTA-T---TGGCGAGGATGT-GGGCTTTCTTA-GG---------------------A-ATTTAAG--------TATAAAGACGCCATTAAT--------------------------GTT-TCCCCATTC--------------------------------CCAGGTGCTGACCAAGTACATACATAAATTGGGCGTGTCGCCAGCCTGGTCGGTSizeHit CountTotal NormTotal
No Reads
droFic1
TGAAAA----------TTC---------------TAA--AAAATGTCGACCTTGACGCCTCTTGAAGCTAACCCCGAGGTAAG-------------AAAAATAAA-----AGATGG-AA-------T---A-------------------CCAATAGTT------------TT--------AGTT-TTGCA--AACTTTT-TTGTT---------TG----TG-CT---TGGCAAAAATGA-CCGCTTCCTTT-GC---------------------AT-TTAAAG--------AGAAAAGACGCCATTAAC--------------------------TT--TTCCCATTC--------------------------------CCAGGTGCTGACCAAGTACATACATAAACTGGGCGTGTCGCCAGCCTGGTCGGTSizeHit CountTotal NormTotal
No Reads
droKik1
CCA-AATTACAAAAAA--C-------------C-AG---AAAATGTCGACCTGGATACCACTCGAATCCAACCCGGAGGTGAGCATACAAAATAATGACCT-----------------------AGTTTCGC----------------------------------------C--------ATTT-TCGCC--AAT-G------GT-----------TG--T--TG---TTGCAAATATGT-TTGACTCCTTG-GA------------ATT-G----TAATTAAAG--------GGTAAAGACGCCATTTTT--------------------------TG--TGCCCATTC--------------------------------CTAGGTGCTGACCAAGTACATACATAAGCTGGGCGTGTCGCCAGCCTGGTCGGTSizeHit CountTotal NormTotal
No Reads
droAna3
CAA-AA----------TTC-------------T-AGC--AAAATGTCGACCTGGACACCATTGGAATCCAACCCCGAGGTAAGCT---------ATAACCC---------AGCCT-GA--G-------------------------------AATATTT------------GCGTTGGCAAAGTT-TTCCA--AA--G------CT-------------T-TTT-TTTACTGCAAAAAAAA-TTGATTCCTTT-GAA-----------ATT-GGCAAAAATTAACTG-------GAAAAAGACGCAATTTAC--------------------------TC--CT--CATAC-------------------------------TCCAGGTGCTGTCTAAGTACATACATAAATTGGGCGTGTCGCCATCCTGGTCGGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................T-AGC--AAAATGTCGACCTGGAC.............................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................CTAAGTACATACATAAATTGGGC....................2311.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTGTCGCCATCCTGGT....2111.001100000
droBip1
CAA-AA----------TTC-------------T-AGC--AAAATGTCGACCTGGACACCTTTAGAATCCAACCCCGAGGTAAG-------------CTATAAGTCC----AGCCG-GA--GCACAGT---T-------------------TCAATAGCT------------TG--------AACT-TTGCA--AA--G------C------------TT--T--TT---TTGCAAAAA-AT-TTGATTCCTTT-GGA-----------ATT-GGCAAAAATTAACTG-------GAAAAAAACCCAATTTAA--------------------------TT--CT--CATAC-------------------------------TCCAGGTACTGTCTAAGTACATACATAAATTGGGCGTGTCGCCATCCTGGTCGGTSizeHit CountTotal NormTotal
No Reads
dp5
AAA-AA----------TAA---------------AGA--AAAATGTCGACCTGGACGCCACTTGAATCCAACCCCGAGGTAAT-------------TACTATAGTT----ATT--A-AGTGCCTGATTATTC-------------------AAATTTCT------------GC--------AACT--GGGAT-AT-TGGCT-G---------ATTGCCG--G--CA---TTGCAAAAAGTGCTTTGCTCCTTT-GAA-----------ATT-GGC---------AA--------TTATAAGACGCCATTGAT--------------------------ATTGTACCCATTC--------------------------------CTAGGTGCTGACCAAGTACATACACAAGCTAGGCGTGTCGCCTGCCTGGTCGGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................GA--AAAATGTCGACCTGGACGCCACTTGC....................................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
................TAA---------------AGA--AAAATGTCGACCTGGACGC...........................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000010
..............................................CGACCTGGACGCCACTTGA....................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
................TAA---------------AGA--AAAATGTCGACCTGGACG............................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
................TAA---------------AGA--AAAATGTCGACCTGGACGCCACT.......................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000000
..........................................ATGTCGACCTGGACGCCACTTG.....................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
..........................................ATGTCGACCTGGACGCCACT.......................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................................GCCACTTGAATCCAACCCCGA........................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................AGA--AAAATGTCGACCTGGA..............................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000010
................TAA---------------AGA--AAAATGTCGACCTGG...............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000010
...................................................TGGACGCCACTTGAATCCAACCCCGAG.......................................................................................................................................................................................................................................................................................................................................................................2711.0010000000010
droPer2
AAA-AA----------TAA---------------AGA--AAAATGTCGACCTGGACGCCACTTGAATCCAACCCCGAGGTAAT-------------TACTATAGTT----ATT--A-AGTGCCTGATTATTC-------------------AAATTTCT------------GC--------AACT--GGGAT-AT-TGGCT-G---------ATTGCCG--G--CA---TTGCAAAAAGTGCTTTGCTCCTTT-GAA-----------ATT-GGC---------AA--------TTATAAGACGCCATTGAT--------------------------ATTGTACCCATTC--------------------------------CTAGGTGCTGACCAAGTACATACACAAGCTAGGCGTGTCGCCTGCCTGGTCGGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
A--------------------------------------AAAATGTCGACCTGGACACCATTGGAATCTAACCCCGAGGTAAG-------------TCTAAGGAGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAAGGGTAATTG-------GT--------CCACGATGGAT---GCGC-----AGACGAA-TT-GAA-TTCCCATTCCAATTTTTAACAATTTTCTGTCTTTTCTTCTTTTAGGTTTTGACCAAGTATATACGCAAGCTGGGCGTGTCGCCGTCTTGGTCGGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................................................................................................................................TTGACCAAGTATATACGCAAGCTGGGC....................2711.00101000
droVir3
TAA-AT----------TTT---------------TTA--AAAATGTCGATCTGGACACCATTGGAATCCAACCCGGAGGTAAG-------------TGGTTATC-----------------------TTTACTAATCTTGTTAACAGTTAACAATGTATGAAAAAA---------------A--GCTTGTA--AT-TT-G-TTGT---------TGCTGTTG--CT---TGGCAAAA-T-T-CGATTTTATTT-CCA-----------ATT-GGC--ATATT------------AAAAAAGACGCCATGATGTCC-----------------------GT--GTCCCATT---------------------------------CCAGGTGCTGACCAAATACATACATAAGCTGGGCGTGTCGTCGGCCTGGTCTGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................TGACCAAATACATACATAAGCTGGGCG...................2712.002002000000000000000000000000000000000000000000000000000000000000
...........................................................ATTGGAATCCAACCCGGAGGTGCT-------------.....................................................................................................................................................................................................................................................................................................................................................2412.002000000000000000000000000000000000000000000000000000000000002000
..............................................CGATCTGGACACCATTGGA....................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCGTGTCGTCGGCCTGGT....2111.001000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGGCGTGTCGTCGGCC........1911.001000000001000000000000000000000000000000000000000000000000000000
....AT----------TTT---------------TTA--AAAATGTCGATCTGGACACCAT........................................................................................................................................................................................................................................................................................................................................................................................3011.001000000000000000000000000000000000000000000000000000000010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATACATAAGCTGGGCGTGTCG..............2111.001000010000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTGTCGTCGGCCTGGTCT..2111.001001000000000000000000000000000000000000000000000000000000000000
.....T----------TTT---------------TTA--AAAATGTCGATCTG................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................ATACATACATAAGCTGGGCGTGTC...............2411.001000000000000000000000000000000000000100000000000000000000000000
..................................TTA--AAAATGTCGATCTGGACACCAT........................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
....................................................................CAACCCGGAGGTAAG-------------TGGTTA...............................................................................................................................................................................................................................................................................................................................................2111.001000010000000000000000000000000000000000000000000000000000000000
....................................A--AAAATGTCGATCTGGACACC..........................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
..................................TTA--AAAATGTCGATCTGGAC.............................................................................................................................................................................................................................................................................................................................................................................................2011.001000000001000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TACATACATAAGCTGGGCGTG.................2111.001000000000000000000000000000000000000000000000000000000000000010
..............................................CGATCTGGACACCATTGGAATCCAACCCGGAG.......................................................................................................................................................................................................................................................................................................................................................................3211.001000000000000000000000000000000000000000000000000000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TACATACATAAGCTGGGCGTGTCGTCG...........2711.001000000000000000000000000000000100000000000000000000000000000000
..A-AT----------TTT---------------TTA--AAAATGTCGAT...................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGGGCGTGTCGTCGGCC........2011.001000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCGTCGGCCTGGTCTGT2011.001000000000100000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGCGTGTCGTCGGCCTG......2011.001000000010000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGCTGGGCGTGTCGTC............1911.001000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................CTGTTG--CT---TGGCAAAA-T-T-CGA................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCGTCGGCCTGGTCT..1811.001000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGCTGGGCGTGTCGTCGGCCTG......2511.001000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................ATACATACATAAGCTGGG.....................1811.001000000000000000000000000000000001000000000000000000000000000000
droMoj3
TAA-AA----------TTT--------TCTTGAAAAC--AAAATGTCGACCTGGACACCATTGGAATCCAACCCAGAGGTAAT-------------AAACTAAC-----------------------TTTACT----CTGTT-----------------GAGAAATTATTTGC--------------------AT-TTGCC-A---------TCTGCCG----------------TTACGA-CGCACTTCTGT-GAATTTGATTTGCAATTTGTC-----ATA--TT-------GAAAGAGACGCCATGTTGA---TTGCTC----------------GT--AACCCATTC--------------------------------CCAGGTACTGACCAAATACATACACAAGCTGGGTGTGTCGCCATCCTGGTCAATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................TCGACCTGGACACCATTGGAATCCAA..............................................................................................................................................................................................................................................................................................................................................................................2611.001100000
........................................AAATGTCGACCTGGACACC..........................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................GACCAAATACATACACAAGCTGGGTGT..................2711.001100000
droGri2
CAA-AT----------ATTAAATTTTTTC-----TTC--AAAATGTCAATCTGGACACCATTGGAATCTAACCCGGAGGTGAG-------------AGCTTATCGAAGCT--A---AAC----G------------------------------------------------------------------A--AATTC-A-TTGTCCCCAAAGCGAGCA--G--CA---ATGCA-------------ACCATT-AA---------------------ATAA--ACTTGAAAATCAAAAAAGACGCCATTATGTCGATGTCCCGTTAT-----ATTTGCTA--TTCCCATT---------------------------------CCAGGTGCTGACCAAATACATACACAAGCTGGGCGTGTCGCCGTCCTGGTCGGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................C-----TTC--AAAATGTCAATCTGGACACC..........................................................................................................................................................................................................................................................................................................................................................................................2411.00110
..................................................................................................................................................................................................................................................................................................................................................................................................................ATACACAAGCTGGGCGTGTCGCCGTCC........2711.00110
...........................................................ATTGGAATCTAACCCGGAGGTGCT-------------G....................................................................................................................................................................................................................................................................................................................................................2520.50101

Generated: 05/18/2015 at 10:30 AM