ID:

dsi_9810

 Coordinate:

3l:19416117-19416266 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.1 -2.9 -2.6

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
Gypsy-5_DGri-I-intLTRGypsy+
mature
  1. 2l:21787401-21787427 -
  2. dsi_9810  3l:19416117-19416143 +
  3. 3l:24134124-24134150 -
star
  1. dsi_9810  3l:19416171-19416197 +
  2. node_35369:584-610 -

Sense Strand Reads

TGCAAGACCAGTTCAGTACAAAGATCTATAATGCACCACCCTACAACAGCTCAGCCAACGGTCAGATCGAACGCTTTCATTCAACTCTTTCAGAAATTATTAGATGCCAAAAAACCGAGAAATTACACAGGTCATTAAACGACCTTATAGAGAGATCAGTTGTCAAACATAATTATGCGGATGCTCGTAGTCCAAGCAAGGCTTTTGTCCAATTAAACGGCCACTGGGTCGGGGAGCCAAGGTGTCAGAG
**************************************************........((((...(((......((((..............))))......)))........))))..............*********************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 M025
embryo
 M023
head
...............................................................................................................................................................................................................................CCAGGTCGGGGAGCCA........... 16 2 20 0.75 15 0 1 13 0 1 0 0 0
..................................................TCAGCCAACGGTCAGATCGAACGCTTT............................................................................................................................................................................. 27 0 3 0.67 2 2 0 0 0 0 0 0 0
........................................................................................................TGCCAAAAAACCGAGAAATTACACAGG....................................................................................................................... 27 0 2 0.50 1 0 1 0 0 0 0 0 0
............................................AACAGCTCAGCCAACGGTCAGATCGAA................................................................................................................................................................................... 27 0 3 0.33 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................CTAGGTCGGGGAGCCA........... 16 1 3 0.33 1 0 0 0 0 1 0 0 0
.............................................ACAGCTCAGCCAACGGTCAGATCGAA................................................................................................................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0
.....................................................GCCAACGGTCAGATCGAACGCTTT............................................................................................................................................................................. 24 0 3 0.33 1 1 0 0 0 0 0 0 0
..................................................TCAGCCAACGGTCAGATCGAACGC................................................................................................................................................................................ 24 0 3 0.33 1 0 1 0 0 0 0 0 0
...................................................CAGCCAACGGTCAGATCGAACGCTT.............................................................................................................................................................................. 25 0 3 0.33 1 0 0 0 1 0 0 0 0
........................................................AACGGTCAGATCGAACGCTTTCAT.......................................................................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CTTTTGTAGAATTAACCGGC............................. 20 3 10 0.30 3 0 0 0 0 0 2 1 0
.............................................................TCAGATCTAACTCTTCCATT......................................................................................................................................................................... 20 3 9 0.22 2 0 2 0 0 0 0 0 0
...............................................................................................................................................................................................................................CCGCGTCGGGGAGCCA........... 16 2 20 0.20 4 0 1 0 3 0 0 0 0
..................................ACCACCGTACAGCAGCTC...................................................................................................................................................................................................... 18 2 6 0.17 1 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................................ACTGGATAGGGGAGCC............ 16 2 20 0.15 3 0 3 0 0 0 0 0 0
.......................................................CATCGCTCAGATTGAACGCT............................................................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 1 0 0 0
.............................................................TCAGAACGAACGCTTGC............................................................................................................................................................................ 17 2 9 0.11 1 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................ACAGCGTCGGGGAGCCA........... 17 2 9 0.11 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TCCCGTGGGTCGGGGAGCC............ 19 3 11 0.09 1 0 0 0 0 0 0 0 1
.........................................................................................................................................................................................................CTTTTGTAGAATGAAACGGC............................. 20 3 11 0.09 1 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................................................................CGGGGCACCGAGGTGTCAG.. 19 3 12 0.08 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTAAACGGCCACTAGAT..................... 17 2 16 0.06 1 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................CCACCCCGTCGGGGAGCCA........... 19 3 18 0.06 1 1 0 0 0 0 0 0 0
............................................................................................................................................................CAGTTGCCAAACATA............................................................................... 15 1 20 0.05 1 1 0 0 0 0 0 0 0
............................................................CTCAGATTGAACGCTT.............................................................................................................................................................................. 16 2 20 0.05 1 0 0 1 0 0 0 0 0
...........................................................GTTCAGAACGAACGCT............................................................................................................................................................................... 16 2 20 0.05 1 0 0 1 0 0 0 0 0

Anti-sense strand reads

ACGTTCTGGTCAAGTCATGTTTCTAGATATTACGTGGTGGGATGTTGTCGAGTCGGTTGCCAGTCTAGCTTGCGAAAGTAAGTTGAGAAAGTCTTTAATAATCTACGGTTTTTTGGCTCTTTAATGTGTCCAGTAATTTGCTGGAATATCTCTCTAGTCAACAGTTTGTATTAATACGCCTACGAGCATCAGGTTCGTTCCGAAAACAGGTTAATTTGCCGGTGACCCAGCCCCTCGGTTCCACAGTCTC
***********************************************************************************************************************........((((...(((......((((..............))))......)))........))))..............************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M023
head
 M025
embryo
 O001
Testis
 SRR902009
testis
 M053
female body
 M024
male body
.....................................................................TTGCGAAAGTAAGTTGAGAAAGTCT............................................................................................................................................................ 25 0 3 3.00 9 0 3 1 1 3 0 0 0 0 1 0 0
.....................................................................TTGCGAAAGTAAGTTGAGAAAGTCTT........................................................................................................................................................... 26 0 3 3.00 9 0 2 3 3 1 0 0 0 0 0 0 0
........................................................TTGCCAGTCTAGCTTGCGAAAGTAAGT....................................................................................................................................................................... 27 0 3 3.00 9 0 5 3 0 0 1 0 0 0 0 0 0
......................................................................................................CTACGGTTTTTTGGCTCTTTAATGTGT......................................................................................................................... 27 0 1 3.00 3 0 0 0 2 0 1 0 0 0 0 0 0
.....................................................CGGTTGCCAGTCTAGCTTGCGAAAGT........................................................................................................................................................................... 26 0 3 2.33 7 6 0 0 0 1 0 0 0 0 0 0 0
...................................................................................TGAGAAAGTCTTTAATAATCTACGGTT............................................................................................................................................ 27 0 2 2.00 4 0 3 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................CCCTCGGTTCCACAGTCTC 19 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0
......................................................................................................CTACGGTTTTTTGGCTCTTTAAT............................................................................................................................. 23 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
...................................................................................................AATCTACGGTTTTTTGGCTCTTTAAT............................................................................................................................. 26 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
............................................................................................................................................CTGGAATATCTCTCTAGTCAACAGTTT................................................................................... 27 0 3 1.67 5 0 1 1 0 3 0 0 0 0 0 0 0
...............................................TCGAGTCGGTTGCCAGTCTAGCT.................................................................................................................................................................................... 23 0 3 1.67 5 0 0 0 0 0 0 0 0 5 0 0 0
....................................................................................GAGAAAGTCTTTAATAATCTACGGTT............................................................................................................................................ 26 0 2 1.50 3 0 1 2 0 0 0 0 0 0 0 0 0
.........................................................TGCCAGTCTAGCTTGCGAAAGTAAGT....................................................................................................................................................................... 26 0 3 1.33 4 0 0 1 0 1 0 0 0 0 0 2 0
.....................................................................................................................................................................................ATGAGCATCAGGTTCGT.................................................... 17 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................TGGGATGTTGTCGAGTCGGTTGCCAGT.......................................................................................................................................................................................... 27 0 3 1.00 3 0 2 0 1 0 0 0 0 0 0 0 0
...................................................................................TGAGAAAGTCTTTAATAATCTACGGT............................................................................................................................................. 26 0 2 1.00 2 0 0 1 0 0 1 0 0 0 0 0 0
...........AAGTCATGTTTCTAGATATTAC......................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................GAGCATCAGGTTCGT.................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................CCCCTCGGTTCCACAGTCT. 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................ACGCGCATCAGGTTCGT.................................................... 17 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................TGCCAGTCTAGCTTGCGAAAGTAAGTT...................................................................................................................................................................... 27 0 3 1.00 3 0 1 0 0 1 0 0 0 0 0 1 0
........................................................................CGAAAGTAAGTTGAGAAAGTCTTTAAT....................................................................................................................................................... 27 0 3 1.00 3 0 1 2 0 0 0 0 0 0 0 0 0
............................ATTACGTGGTGGGATGTTGTCGAGT..................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................TCTCTAGTCAACAGTTTGTATTAAT........................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..........CAAGTCATGTTTCTAGATATTACGTGGT.................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................GCCAGTCTAGCTTGCGAAAGTAAGT....................................................................................................................................................................... 25 0 3 1.00 3 1 1 0 0 0 1 0 0 0 0 0 0
.........TCAAGTCATGTTTCTAGATATT........................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TCGAGCATCAGGTTCGT.................................................... 17 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................TTGAGAAAGTCTTTAATAATCTACGGT............................................................................................................................................. 27 0 2 1.00 2 0 0 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................TCTTCGAGCATCAGGTTCGT.................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TCCGAGCATCAGGTTCGT.................................................... 18 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
................................................CGAGTCGGTTGCCAGTCTAGCTTGCGA............................................................................................................................................................................... 27 0 3 1.00 3 0 1 1 1 0 0 0 0 0 0 0 0
....................................................................................GAGAAAGTCTTTAATAATCTACGGT............................................................................................................................................. 25 0 2 1.00 2 0 0 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................GCGCCGACGAACATCAGGTTCGT.................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................AGCTTGCGAAAGTAAGTTGAGAAAGT.............................................................................................................................................................. 26 0 3 1.00 3 1 1 0 0 1 0 0 0 0 0 0 0
...........AAGTCATGTTTCTAGATATTACGT....................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................CGCGCATCAGGTTCGT.................................................... 16 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......TGGTCAAGTCATGTTTCTAGATATT........................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................GGGATGTTGTCGAGTCGGTTGCCAGT.......................................................................................................................................................................................... 26 0 3 0.67 2 0 0 0 2 0 0 0 0 0 0 0 0
.....................................................................TTGCGAAAGTAAGTTGAGAAAGT.............................................................................................................................................................. 23 0 3 0.67 2 0 1 0 0 1 0 0 0 0 0 0 0
........................................................TTGCCAGTCTAGCTTGCGAAAGTAA......................................................................................................................................................................... 25 0 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0 0
.....................................................................TTGCGAAAGTAAGTTGAGAAAGTCTTT.......................................................................................................................................................... 27 0 3 0.67 2 0 0 0 2 0 0 0 0 0 0 0 0
......................................................................TGCGAAAGTAAGTTGAGAAAGTCT............................................................................................................................................................ 24 0 3 0.67 2 0 0 1 0 0 0 0 0 0 1 0 0
....................................................................ATTGCGAAAGTAAGTTGAGAAAGTCT............................................................................................................................................................ 26 1 3 0.67 2 0 0 0 1 0 0 0 0 0 1 0 0
................................................................CTAGCTTGCGAAAGTAAGTTGAGAAAGTCT............................................................................................................................................................ 30 0 3 0.67 2 0 1 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................GTTCGTTCCGAAAACAGGTTAA.................................... 22 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1
.........................................................................................................CGGTTTTTTGGCTCTTTAATGTGT......................................................................................................................... 24 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TCAGGTTCGTTGCGAAA............................................. 17 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................TAACGAGCATCAGGTTCGT.................................................... 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................TTGAGAAAGTCTTTAATAATCTACGGTT............................................................................................................................................ 28 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................CGAGCGTCAGGTTCGT.................................................... 16 1 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................................GTTGAGAAAGTCTTTAATAATCTACGGT............................................................................................................................................. 28 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................ACGGTTTTTTGGCTCTTTAATGTGT......................................................................................................................... 25 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................CCCGAGCATCAGGTTCGT.................................................... 18 2 4 0.50 2 0 0 0 0 0 0 1 1 0 0 0 0
......................................................................................................CTACGGTTTTTCGGCTCTTTAATGTGT......................................................................................................................... 27 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
...................TTTCTAGATGTTACGTG...................................................................................................................................................................................................................... 17 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CAGGTTCGTTCAGAAA............................................. 16 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GCCGGTGACCCAGCC.................. 15 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................ACCCCCGAGCATCAGGTTCGT.................................................... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GAAAACAGGTTAATTTGC............................... 18 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................GCTGCCAGCATCAGGTTCGT.................................................... 20 3 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................CCTAAGGGGATCAGGTTCGT.................................................... 20 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................CTGGCGAAAGTAAGTTGAGAA................................................................................................................................................................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................TTGCGAAAGTAAGTTGAGAAAGTC............................................................................................................................................................. 24 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................AGCTTGCGAAAGTAAGTTGAGAAA................................................................................................................................................................ 24 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................TGTCGAGTCGGTTGCCAGTCTAGCG.................................................................................................................................................................................... 25 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................CGGGTCGGTTGCCAGTCTAGCTTGCGA............................................................................................................................................................................... 27 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................................ATGTTGTCGAGTCGGTTGCCAGTCT........................................................................................................................................................................................ 25 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................CTAGCTTGCGAAAGTAAGTTGAGAA................................................................................................................................................................. 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................GGTGGGATGTTGTCGAGTCGGTT................................................................................................................................................................................................ 23 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................GTGGTGGGATGTTGTCGAGTCGGT................................................................................................................................................................................................. 24 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0
.......................................GGATGTTGTCGAGTCGGTTGCCAGT.......................................................................................................................................................................................... 25 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................CTGGAATATCTCTCTAGTCAACAGT..................................................................................... 25 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................CGGTTGCCAGTCTAGCTTGCGAAAGTAAGT....................................................................................................................................................................... 30 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................TGCCATACTAGCTTGCGAAGGT........................................................................................................................................................................... 22 3 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................GGGATGTTGTCGAGTCGGTTGCCAGTCT........................................................................................................................................................................................ 28 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TGCTGGAATATCTCTCTAGTCAACAGT..................................................................................... 27 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................TACGTGGTGGGGTGTT............................................................................................................................................................................................................ 16 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CGGTTTTTCGGCTCTTTAATGTGTCT....................................................................................................................... 26 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................TCGAGCATCAGGTTCGTC................................................... 18 2 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0
................................CGTGGTGGGATGTTGTCGAGTCGGT................................................................................................................................................................................................. 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................CTAGCATCAGGTTCGT.................................................... 16 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................CCACGAGCATCAGGTTCGTC................................................... 20 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................GGGATGTTGTCGAATCAGTTGCCAGT.......................................................................................................................................................................................... 26 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................GTGGTGGGATGTTGTCGAGT..................................................................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................ACGAAAGTAAGTTGAGAAAGTCT............................................................................................................................................................ 23 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................TGCCAGTCTAGTTAGCGAAAATAAGT....................................................................................................................................................................... 26 3 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0
......................................................................TGCGAAAGTAAGTTGAGAAAGTCTTTGAT....................................................................................................................................................... 29 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................CGGTTGCCATTCTAGCTTGCGAAAGTA.......................................................................................................................................................................... 27 1 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0
..................................TGGTGGGATGTTGTCGAGTCGGT................................................................................................................................................................................................. 23 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................GCTGGAATATCTCTCTAGTCAACAGTT.................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................TTTTGCGAAAGTAAGTTGAGAAAGTCTTTAAT....................................................................................................................................................... 32 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................TGGGATGTTGTCGAGT..................................................................................................................................................................................................... 16 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................TTGCGAAAGTAAGTTG..................................................................................................................................................................... 16 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................GGAATATCTCTCTAGTCAACAGTTT................................................................................... 25 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................CGAGTCGGTTGCCACTCTT....................................................................................................................................................................................... 19 2 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................TCTCTAGGCAACAGTT.................................................................................... 16 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................CTTGCCAGCATCAGGTTCGT.................................................... 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................ACGCTCATCAGGTTCGT.................................................... 17 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................TAACGAGCATCAGGTTCGTC................................................... 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TCTCTAGTTACCAGTTTCTATTAAT........................................................................... 25 3 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................ACCACGAGCATCAGGTTCGTC................................................... 21 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TTGCCGGTGACCCCG.................... 15 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................GGATGTTGTCAAGTC.................................................................................................................................................................................................... 15 1 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................TCTCTAGGCAACAATTT................................................................................... 17 2 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0
.....................................................................................................................................................................................CAGAGCATCAGGTTCGT.................................................... 17 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0
..GTTCTGGTCAGGTCA......................................................................................................................................................................................................................................... 15 1 13 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................TTCGAACATCAGGTTCGT.................................................... 18 2 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................CGCTAGTCTACAGTTTG.................................................................................. 17 2 17 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................TGACGAACATCAGGTTCGT.................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................TTGCGAAGGTAAGTT...................................................................................................................................................................... 15 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................CGGACATCAGGTTCGT.................................................... 16 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................CTAGCGGCATCAGGTTCGT.................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:19416067-19416316 + dsi_9810 TGCAAGA-CCAGTTCAGTACAAAGATCTATAATGCACCACCCTACAACAGCTCAGCCAACGGTCAGATCGAACGCTTTCATTCAACTCTTTCAGAAATTATTAGATGCCAAAAAACCGAGAAATTACACAGGTCATTAAACGACCTTATAGAGAGATCAGTTGTCAAACATAATTATGCGG-ATGCTCGTAGTCC---------------AAGCAAGGCTTTTGTCCAATTAAACGGCCACTGGGTCGGGGAGCCAAGGTGTCAGAG
droSec2 scaffold_6526:1456-1631 + TGCAAGA-CCAGTTCAATATAAAGGTCTATAAAGCACCACCCTACAACAGCTCAGCCAACGGTCAGATCGATCGCTTTCATTCAACTCTTTCAGAAATTATTAGATGCCAAAAAGCCGAGAAATTACACAGTTCATAAAACGACCTTATAGAGAGATCAGATGTCAAATATAATTAT------------------------------------------------------------------------------------------
dm3 chr2RHet:1650510-1650685 - TACAAGA-CCAGTTCAATATAAAGGTCTATAAAGCACCACTCTACAACAGCTCAGCCGACGGTCAGATCGAACGCTTTCATTCAACTCTTTCAGAAATTATTAGATGCCAAAAAGCCGAGAAATTACACAGTTCATTAAACGACCTTATAGAGAGATCAGTTGTCAAATATAATTAT------------------------------------------------------------------------------------------
droEre2 scaffold_4929:25875643-25875818 - TGCAAGA-CCAGTTCAATATAAAGGTCTATAAAGCACCACCCTACAACACTTCAGCCAACGGTCAGATAGAACGCTTTCATTCAACTCTTTCAGAGATTATTAGATGCCAAAAGGCCGAGAAATTACATAGTTCATTAAACGACCCTTTAGAGAGATCAGTCGTCCAGTATAATTAT------------------------------------------------------------------------------------------
droYak3 v2_chr3L_random_072:42449-42624 + TGCAAGA-CCAGTTCAACATAAAGGTCTATAAAGCACCACCCTACAACAGTTCAGCCAACGGTCAGATCGAACGCTTTCATTCAACTCTTTCAGAAATTATTAGATGCCAAAAGGCTGAAAAACTACACAGTTCATTAAACGACCTTATAGAAAAATAAGTTGTTAAATATAATTAT------------------------------------------------------------------------------------------
droEug1 scf7180000408832:1196-1373 + TGAAAGA-TCAATTAAATATTACCATTTTTAGAGCCCCACCTTATAAAAGTTCAGTTAACGGTCAGATCGAAAGGTTTCACTCTACTCTTTCTGAAATAATGCGATGCATCAAGACAAAACAAATCTACAATACTTTTGAAGAACTATTAAATAGAGCCGTTTACGAATATAATTACAC----------------------------------------------------------------------------------------
droBia1 scf7180000302125:67338-67515 + TGAAAGA-TCAATTAAATATTACCATTTTTAGAGCCCCACCTTATAAAAGTTCAGTTAACGGTCAGATAGAAAGGTTTCATTCCACTCTTTCTGAAATAATGCGATGCATTAAAACAAAAAATATTTACAATACTTTTGAAGAACTATTAAATAGAGCCGTTTACGAATATAATTACAC----------------------------------------------------------------------------------------
droTak1 scf7180000414314:10262-10452 + TGAAAGA-CCAATTAGGAATTAAAGTCTACACGGCTCCCCCGTATAAAAGTTCAGTAAATGAACAAATAGAACGATTCCATTCTACGCTTTCAGACATCATGCGATGCCTAAAAAGTAATGGAATTTAGAACACGTTCCACGATTTGTTAGATCGAGCCATTTATTAATAAAACTAGCAGGATCT---GTAGCCC------------------------------------------------------------------------
droEle1 scf7180000490689:16459-16637 - TGAGAGATCCAGTTAAATATAACCATTTTTAAAGCTCCTCCCTACAAAAGTTCAGTTAACGGACAGATTGAACGATTTCATTCGACCCTTTCGGAAATAATAATATGCCTTAAAACCAAAAAAATATACAATAACTTTGAAGAATTGTTAGACAGAGCCATTTACGAATACAATTATAC----------------------------------------------------------------------------------------
droRho1 scf7180000762987:370-552 - TACAAGA-TCAATTTAATATCGAAGTTTACAAAACACCTCCATATAACAGTTCAGCAAACGGCCAAATCGAACGTTTCCATTCAACACTGTCAGAAATTATTCGGTGCCAAAAAGCCGACAAAGTACACGCTTCGTTAAAAGATCTTATAGACAGATCAGTTGTCAAATATAATTATTCAG-TTG----------------------------------------------------------------------------------
droFic1 scf7180000449802:8139-8314 - TACAAGA-TCAATTTAATATCGAAGTTTATAAAACACCCTCATATAACAGTTCAGCGAACGGCCAAATCGAACGCTTCCATTCAACACTGTCCGAAATTATTCGTTGCCATAAGGCCGACAAAGTACACGCTTCATTAAAAGATCTTATAGACAGATCAGTTGTCAAATATAATTAT------------------------------------------------------------------------------------------
droKik1 scf7180000301670:12502-12677 + TACAAGA-TCAATTCAACATAGAAGTTTACAAAACACCCCCCTATAACAGTTCAGCAAATGGCCAAATTGAACGTTTTCATTCAACATTATCAGAAATTATTAGGTGTCATAAAGCTGAAAAATTACACGCTTCTTTAAAAGATCTTATTGAAAGATCGGTTGTCAGATATAATTAT------------------------------------------------------------------------------------------
droAna3 scaffold_13228:342515-342687 + TAGAAGA-TCAACTTAAAATATCAGTCCATACAACAGCCCCATACGCTTCAACCAGTAATGGTCAGGTAGAACGATTTCATTCAACACTTTCAGAAATCATGAGATGCATTAAAAAAGACAACGGGAGTATGACATTAGAAGACCTAATTTTCAAATCAGTCGAAGAATATAAT---------------------------------------------------------------------------------------------
droBip1 scf7180000396814:39592-39768 + TACAAGA-TCAATTTAATATTGAAGTTTACGAAGCACCTCCATATAACAGCTCAGCAAACGGCCAAATCGAACGCTTCCATTCCACACTGTCCGAAATTATTCGTTGTCAAAAAGCAGACAAAGTACACGCATCGTTAAGAGATCTTATAGACAGATCAGTTGTCAAATATAATTATG-----------------------------------------------------------------------------------------
dp5 Unknown_group_609:3124-3303 - TGAAAGA-CCAATTGGGAATTCAGATATTTACAGCCCCACCCTACAAAAGCTCAGTAAACGGACAAGTAGAAAGATTCCATTCAACCCTCTCAGAAATAATGCGGTGTTTAAAAAGTAAAGGAATCTATAGCACATTTCAAGAATTACTAAATCGAGCTATTTACGAATACAATTCCTCGG--------------------------------------------------------------------------------------
droPer2 scaffold_177:32090-32269 - TGAAAGA-CCAATTGGGAATTCAGATATTTACAGCCCCACCCTACAAAAGCTCAGTAAACGGACAAGTAGAAAGATTCCATTCAACCCTCTCAGAAATAATGCGGTGTTTAAAAAGTAAAGGAATCTATAGCACATTTCAAGAATTACTAAATCGAGCTATTTACGAATACAATTTCTCGG--------------------------------------------------------------------------------------
droWil2 scf2_1100000004852:121630-121858 + TGAATAA-TCAGCTAGGTATAAATGTCCATACAACCCCACCATATACTTCGTCTATCAACGGTCAGGTAAAAAGATTTCATTCCACATTTACAGAAATGATGAGATGCCTAAAGATTAAGCATCCAGAATTGGAATTCGAAGACTTAATATTCAGAGCAGTAGACGAGTATAATAAAACGA-TTC---ATAGTACCACTAACAAAAAACCAATAAAAGCCTTTTTTGCATTAGA---------------------------------
droVir3 scaffold_12954:317873-318050 + TGCAGGA-CCAATTAAATATAAAAGTTTATAAAACACCACCCTACAAAAGCGCAGTGAATGGTCAGGTAGAAAGATTTCATTCAACACTATCAGATATTATGAGATGCCACAAAAGAAAACAGGAACACAGAACATTCGAAGAACTACTTAACAAATCAATATACGATTACAACTACAC----------------------------------------------------------------------------------------
droMoj3 scaffold_6541:1301384-1301557 + TCAAAGA-CCAATTGAATATCGAAATTTATAAGGCTCCACCTTACAAAAGCTCAGTTAACGGCCAAGTGGAAAGATTCCATTCTACCTTATCCGAAATAATGAGATGCCTAAAGAATAACCAAAAACAGAACAGTTTCAAGGAACTATTAGATAGAGCAGTCTACGAATACAATT--------------------------------------------------------------------------------------------
droGri2 scaffold_15116:1711995-1712108 + TAGAAAA-CCAATTAAAATCAAAAATCTACACGATACCACCATACAACTCAACAAGCAACGGTCAAGTTGAAAGATTTCATTCAACACTTACCGAAATAATGAGATGTGTGAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGCAAGA-CCAGTTCAGTACAAAGATCTATAATGCACCACCCTACAACAGCTCAGCCAACGGTCAGATCGAACGCTTTCATTCAACTCTTTCAGAAATTATTAGATGCCAAAAAACCGAGAAATTACACAGGTCATTAAACGACCTTATAGAGAGATCAGTTGTCAAACATAATTATGCGG-ATGCTCGTAGTCC---------------AAGCAAGGCTTTTGTCCAATTAAACGGCCACTGGGTCGGGGAGCCAAGGTGTCAGAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................TCAGCCAACGGTCAGATCGAACGCTTT.............................................................................................................................................................................................2730.67200000000002000000
.........................................................................................................TGCCAAAAAACCGAGAAATTACACAGG.......................................................................................................................................2720.50100000001000000000
.............................................AACAGCTCAGCCAACGGTCAGATCGAA...................................................................................................................................................................................................2730.33100000001000000000
..............................................ACAGCTCAGCCAACGGTCAGATCGAA...................................................................................................................................................................................................2630.33100000000001000000
......................................................GCCAACGGTCAGATCGAACGCTTT.............................................................................................................................................................................................2430.33100000000001000000
...................................................TCAGCCAACGGTCAGATCGAACGC................................................................................................................................................................................................2430.33100000001000000000
....................................................CAGCCAACGGTCAGATCGAACGCTT..............................................................................................................................................................................................2530.33100000010000000000
.........................................................AACGGTCAGATCGAACGCTTTCAT..........................................................................................................................................................................................2430.33100000000001000000
droSec2
TGCAAGA-CCAGTTCAATATAAAGGTCTATAAAGCACCACCCTACAACAGCTCAGCCAACGGTCAGATCGATCGCTTTCATTCAACTCTTTCAGAAATTATTAGATGCCAAAAAGCCGAGAAATTACACAGTTCATAAAACGACCTTATAGAGAGATCAGATGTCAAATATAATTAT------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
TACAAGA-CCAGTTCAATATAAAGGTCTATAAAGCACCACTCTACAACAGCTCAGCCGACGGTCAGATCGAACGCTTTCATTCAACTCTTTCAGAAATTATTAGATGCCAAAAAGCCGAGAAATTACACAGTTCATTAAACGACCTTATAGAGAGATCAGTTGTCAAATATAATTAT------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................AAAGGTCTATAAAGCACCACTCTACAACAGCT.......................................................................................................................................................................................................................3212.0020000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................CGCTTTCATTCAACTCTTTCAGAAAT.........................................................................................................................................................................2631.6750000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AGCCGACGGTCAGATCGAACG.................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..........................................TACAACAGCTCAGCCGACGGTCAGA........................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GCTCAGCCGACGGTCAGATCGAACGC................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................CTCAGCCGACGGTCAGATCGAA...................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................AAGGTCTATAAAGCACCACTCTACAACA..........................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TAGAGAGATCAGTTGTCAAATATA...............................................................................................2430.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................ATAGAGAGATCAGTTGTCAAA...................................................................................................2160.6740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TAGAGAGATCAGTTGTCAAAT..................................................................................................2160.6740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000000000000000000
...........GTTCAATATAAAGGTCTATAAAGCACC.....................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........AGTTCAATATAAAGGTCT...............................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................CAGAAATTATTAGATGCCAAAAAGC.......................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................ACCTTATAGAGAGATCAGTTGTCAAAT..................................................................................................2760.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................CGACCTTATAGAGAGATCAGT..........................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
........................................................................CGCTTTCATTCAACTCTTTCAGAAA..........................................................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TAGAGAGATCAGTTGTCAAATATAAT.............................................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................TCATTCAACTCTTTCAGAAATTATTAGA..................................................................................................................................................................2830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TCAGATCGAACGCTTTCATTCAAC.....................................................................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TAGAGAGATCAGTTGTCAAATATAA..............................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................................GGTCAGATCGAACGCTTTCATTCAAC.....................................................................................................................................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................AACGACCTTATAGAGAGATCAGT..........................................................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TATAGAGAGATCAGTTGTCAAATATAA..............................................................................................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................TAAACGACCTTATAGAGAGATCAGT..........................................................................................................2530.3310000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TCGAACGCTTTCATTCAACTCTTTCAGA............................................................................................................................................................................2830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................CGACCTTATAGAGAGATCAGTTG........................................................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......................................................................................TCTTTCAGAAATTATTAGATGCCAA............................................................................................................................................................2580.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................AACTCTTTCAGAAATTATTAG...................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................CACAGTTCATTAAACGACCTTATAGA...................................................................................................................2640.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................TCATTAAACGACCTTATAGAGAGA...............................................................................................................2440.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................AAAGCCGAGAAATTACAA..........................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................GTCAGATCGAACGCTTTCATT.........................................................................................................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
............................................................GGTCAGATCGAACGCTTTCAT..........................................................................................................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..CAAGA-CCAGTTCAATATA......................................................................................................................................................................................................................................................1880.1310000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................ACGGTCAGATCGAACGCTTTC............................................................................................................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................GGTCAGATCGAACGCTTTCA...........................................................................................................................................................................................2080.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
droEre2
TGCAAGA-CCAGTTCAATATAAAGGTCTATAAAGCACCACCCTACAACACTTCAGCCAACGGTCAGATAGAACGCTTTCATTCAACTCTTTCAGAGATTATTAGATGCCAAAAGGCCGAGAAATTACATAGTTCATTAAACGACCCTTTAGAGAGATCAGTCGTCCAGTATAATTAT------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................GACCCTTTAGAGAGATCAGT..........................................................................................................2011.0010000010
................................................................................................................................TAGTTCATTAAACGACCCTTTAGAGAGA...............................................................................................................2820.5010000001
............................................................................................................................TACATAGTTCATTAAACGACCCT........................................................................................................................2320.5011000000
.........CAGTTCAATATAAAGGTCTATAAA..........................................................................................................................................................................................................................................2460.1711000000
.....GA-CCAGTTCAATATAAAGGT.................................................................................................................................................................................................................................................2070.1410001000
droYak3
TGCAAGA-CCAGTTCAACATAAAGGTCTATAAAGCACCACCCTACAACAGTTCAGCCAACGGTCAGATCGAACGCTTTCATTCAACTCTTTCAGAAATTATTAGATGCCAAAAGGCTGAAAAACTACACAGTTCATTAAACGACCTTATAGAAAAATAAGTTGTTAAATATAATTAT------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................TACAACAGTTCAGCCAACGGTCAGATC......................................................................................................................................................................................................2750.20101000000000
..........................................TACAACAGTTCAGCCAACGGTCAGA........................................................................................................................................................................................................2550.20101000000000
droEug1
TGAAAGA-TCAATTAAATATTACCATTTTTAGAGCCCCACCTTATAAAAGTTCAGTTAACGGTCAGATCGAAAGGTTTCACTCTACTCTTTCTGAAATAATGCGATGCATCAAGACAAAACAAATCTACAATACTTTTGAAGAACTATTAAATAGAGCCGTTTACGAATATAATTACAC----------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TGAAAGA-TCAATTAAATATTACCATTTTTAGAGCCCCACCTTATAAAAGTTCAGTTAACGGTCAGATAGAAAGGTTTCATTCCACTCTTTCTGAAATAATGCGATGCATTAAAACAAAAAATATTTACAATACTTTTGAAGAACTATTAAATAGAGCCGTTTACGAATATAATTACAC----------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TGAAAGA-CCAATTAGGAATTAAAGTCTACACGGCTCCCCCGTATAAAAGTTCAGTAAATGAACAAATAGAACGATTCCATTCTACGCTTTCAGACATCATGCGATGCCTAAAAAGTAATGGAATTTAGAACACGTTCCACGATTTGTTAGATCGAGCCATTTATTAATAAAACTAGCAGGATCT---GTAGCCC------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TGAGAGATCCAGTTAAATATAACCATTTTTAAAGCTCCTCCCTACAAAAGTTCAGTTAACGGACAGATTGAACGATTTCATTCGACCCTTTCGGAAATAATAATATGCCTTAAAACCAAAAAAATATACAATAACTTTGAAGAATTGTTAGACAGAGCCATTTACGAATACAATTATAC----------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TACAAGA-TCAATTTAATATCGAAGTTTACAAAACACCTCCATATAACAGTTCAGCAAACGGCCAAATCGAACGTTTCCATTCAACACTGTCAGAAATTATTCGGTGCCAAAAAGCCGACAAAGTACACGCTTCGTTAAAAGATCTTATAGACAGATCAGTTGTCAAATATAATTATTCAG-TTG----------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TACAAGA-TCAATTTAATATCGAAGTTTATAAAACACCCTCATATAACAGTTCAGCGAACGGCCAAATCGAACGCTTCCATTCAACACTGTCCGAAATTATTCGTTGCCATAAGGCCGACAAAGTACACGCTTCATTAAAAGATCTTATAGACAGATCAGTTGTCAAATATAATTAT------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TACAAGA-TCAATTCAACATAGAAGTTTACAAAACACCCCCCTATAACAGTTCAGCAAATGGCCAAATTGAACGTTTTCATTCAACATTATCAGAAATTATTAGGTGTCATAAAGCTGAAAAATTACACGCTTCTTTAAAAGATCTTATTGAAAGATCGGTTGTCAGATATAATTAT------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TAGAAGA-TCAACTTAAAATATCAGTCCATACAACAGCCCCATACGCTTCAACCAGTAATGGTCAGGTAGAACGATTTCATTCAACACTTTCAGAAATCATGAGATGCATTAAAAAAGACAACGGGAGTATGACATTAGAAGACCTAATTTTCAAATCAGTCGAAGAATATAAT---------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....GA-TCAACTTAAAATATCAGTCCATA............................................................................................................................................................................................................................................25200.102020000
...............AAAATATCAGTCCATACAACAGCCC...................................................................................................................................................................................................................................25200.051100000
...........................................................................................................CATTAAAAAAGACAACGGGAGTATGAC.....................................................................................................................................27200.051010000
...........................................................TGGTCAGGTAGAACGATTTCATTCA.......................................................................................................................................................................................25200.051000010
.................................ACAGCCCCATACGCTTCAAC......................................................................................................................................................................................................................20200.051100000
..........................CCATACAACAGCCCCATACGCTTCAAC......................................................................................................................................................................................................................27200.051100000
.............................................................................................GAAATCATGAGATGCATTAAAAAAGAC...................................................................................................................................................27200.051010000
........TCAACTTAAAATATCAGTCCATACAAC........................................................................................................................................................................................................................................27200.051010000
.......................................................................................................GATGCATTAAAAAAGACAACGGGAG...........................................................................................................................................25200.051010000
...............................................................................................................AAAAAAGACAACGGGAGTATG.......................................................................................................................................21200.051010000
..............TAAAATATCAGTCCATACAACAGCCC...................................................................................................................................................................................................................................26200.051010000
..............................................................................................................TAAAAAAGACAACGGGAGTATGACA....................................................................................................................................25200.051010000
.............................................................GTCAGGTAGAACGATTTCATTCAACA....................................................................................................................................................................................26200.051100000
.............................................................................TCATTCAACACTTTCAGAAATCATGAGG..................................................................................................................................................................28200.051100000
droBip1
TACAAGA-TCAATTTAATATTGAAGTTTACGAAGCACCTCCATATAACAGCTCAGCAAACGGCCAAATCGAACGCTTCCATTCCACACTGTCCGAAATTATTCGTTGTCAAAAAGCAGACAAAGTACACGCATCGTTAAGAGATCTTATAGACAGATCAGTTGTCAAATATAATTATG-----------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
TGAAAGA-CCAATTGGGAATTCAGATATTTACAGCCCCACCCTACAAAAGCTCAGTAAACGGACAAGTAGAAAGATTCCATTCAACCCTCTCAGAAATAATGCGGTGTTTAAAAAGTAAAGGAATCTATAGCACATTTCAAGAATTACTAAATCGAGCTATTTACGAATACAATTCCTCGG--------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................TAAACGGACAAGTAGAAAGA................................................................................................................................................................................................2021.0020000000020
...........................................................................................................................ATCTATAGCACATTTCAAG.............................................................................................................................1940.2510100000000
droPer2
TGAAAGA-CCAATTGGGAATTCAGATATTTACAGCCCCACCCTACAAAAGCTCAGTAAACGGACAAGTAGAAAGATTCCATTCAACCCTCTCAGAAATAATGCGGTGTTTAAAAAGTAAAGGAATCTATAGCACATTTCAAGAATTACTAAATCGAGCTATTTACGAATACAATTTCTCGG--------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TGAATAA-TCAGCTAGGTATAAATGTCCATACAACCCCACCATATACTTCGTCTATCAACGGTCAGGTAAAAAGATTTCATTCCACATTTACAGAAATGATGAGATGCCTAAAGATTAAGCATCCAGAATTGGAATTCGAAGACTTAATATTCAGAGCAGTAGACGAGTATAATAAAACGA-TTC---ATAGTACCACTAACAAAAAACCAATAAAAGCCTTTTTTGCATTAGA---------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................CAGTAGACGAGTATAATAAAACGA-TT...................................................................................2620.50101000
droVir3
TGCAGGA-CCAATTAAATATAAAAGTTTATAAAACACCACCCTACAAAAGCGCAGTGAATGGTCAGGTAGAAAGATTTCATTCAACACTATCAGATATTATGAGATGCCACAAAAGAAAACAGGAACACAGAACATTCGAAGAACTACTTAACAAATCAATATACGATTACAACTACAC----------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................AACACTATCAGATATTATGAGATG................................................................................................................................................................24172.18370000500000000000000000000401500000020604100000000000000000000000
.........................................................................................................................................CGAAGAACTACTTAACAAATCAATA.........................................................................................................25202.0040000020000000100000000002509930020004300000000000000000000000000
...................................................................................AACACTATCAGATATTATGAGAT.................................................................................................................................................................23181.83330000410000000100000000000102000000000303000000000000000000000000
...................................................................................AACACTATCAGATATTATGAGATGC...............................................................................................................................................................25171.82310000200000000000000000000301901030000201000000000000000000000000
.........................................................................................................................................CGAAGAACTACTTAACAAATCAAT..........................................................................................................24201.3527001010000000000000000001038201004000321000000000000000000000000
..........................................................................ATTTCATTCAACACTATCAGATA..........................................................................................................................................................................23171.1219006000000000000000000000441000003001000000000000000000000000000
....................................................................................ACACTATCAGATATTATGAGATGCCA.............................................................................................................................................................2611.001000000000000000000000000010000000000000000000000000000000000000
...................................................................................AACACTATCAGATATTATGAGATGCCAC............................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
...................................................................................AACACTATCAGATATTATGAGATGCC..............................................................................................................................................................2611.001000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................CGAAGAACTACTTAACAAATCAATAT........................................................................................................26200.9519001020000000000000000000245000000101300000000000000000000000000
.........................................................................................................................................CGAAGAACTACTTAACAAATCAATATA.......................................................................................................27200.9018003000000000000000000000205800000000000000000000000000000000000
..........................................................................ATTTCATTCAACACTATCAGATATTA.......................................................................................................................................................................26160.8814006000000000000000000000124000000000010000000000000000000000000
.........................................................................................................................................CGAAGAACTACTTAACAAATCAATATAC......................................................................................................28200.8517002000000000000000000000235300000001001000000000000000000000000
.............................................................GTCAGGTAGAAAGATTTCATTCAAC.....................................................................................................................................................................................25140.436000000000000100000000000004000000000001000000000000000000000000
.......................................................TGAATGGTCAGGTAGAAAGATTTC............................................................................................................................................................................................24120.425000000000031010000000000000000000000000000000000000000000000000
..........................................................................ATTTCATTCAACACTATCAGAT...........................................................................................................................................................................22170.417000000100000000000000000212000000001000000000000000000000000000
...........................................................TGGTCAGGTAGAAAGATTTCATTC........................................................................................................................................................................................24130.385000000000001010000000000000000000000003000000000000000000000000
..........................................................................ATTTCATTCAACACTATCAGATATTAT......................................................................................................................................................................27160.315001000000000000000000000102000001000000000000000000000000000000
...........................................................TGGTCAGGTAGAAAGATTTCATTCA.......................................................................................................................................................................................25130.314000000000000000000000000011000000000002000000000000000000000000
......................AAGTTTATAAAACACCACCCTA...............................................................................................................................................................................................................................22200.306006000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................GAACATTCGAAGAACTACTTAACA.................................................................................................................24200.306002000000000010000000000000000000000003000000000000000000000000
..........................................................................ATTTCATTCAACACTATCAGATATT........................................................................................................................................................................25160.254002000000000000000000000200000000000000000000000000000000000000
.......................................................TGAATGGTCAGGTAGAAAGATTTCATT.........................................................................................................................................................................................27120.253000000000200000000000000000100000000000000000000000000000000000
......................AAGTTTATAAAACACCACCCTACA.............................................................................................................................................................................................................................24200.204003000000000000000000000000000001000000000000000000000000000000
...AGGA-CCAATTAAATATAAAAGTTTATCC...........................................................................................................................................................................................................................................2850.201000000000000000000000000010000000000000000000000000000000000000
.....GA-CCAATTAAATATAAAAGTTTAT.............................................................................................................................................................................................................................................2450.201000000000000000000000000000000010000000000000000000000000000000
..CAGGA-CCAATTAAATATAAAAGTTTA..............................................................................................................................................................................................................................................2650.201000000000000000000000000000100000000000000000000000000000000000
......................AAGTTTATAAAACACCACCCTAC..............................................................................................................................................................................................................................23200.204004000000000000000000000000000000000000000000000000000000000000
..........................................................................ATTTCATTCAACACTATCAGATAT.........................................................................................................................................................................24160.193001000000000000000000000200000000000000000000000000000000000000
...........................................................TGGTCAGGTAGAAAGATTTCATTCAAC.....................................................................................................................................................................................27130.152000000000000000000000000001000000000100000000000000000000000000
.........................................................................................................................................CGAAGAACTACTTAACAAATCAATC.........................................................................................................25200.153000000000000000000002000000010000000000000000000000000000000000
................................AACACCACCCTACAAAAGCGC......................................................................................................................................................................................................................21200.153000000100000000000000000000000000000001000000000000000000000010
......................AAGTTTATAAAACACCACCCTACAAA...........................................................................................................................................................................................................................26200.153001000000000000000000000001000000001000000000000000000000000000
.............................................................GTCAGGTAGAAAGATTTCATTCAACAC...................................................................................................................................................................................27140.142100000000000000000000000001000000000000000000000000000000000000
......................................................................AAAGATTTCATTCAACACTATCAGA............................................................................................................................................................................25140.142002000000000000000000000000000000000000000000000000000000000000
...........................................................TGGTCAGGTAGAAAGATTTCATTT........................................................................................................................................................................................24150.132000000000000200000000000000000000000000000000000000000000000000
..........................................................................ATTTCATTCAACACTATCAGATATTT.......................................................................................................................................................................26160.132000000000000000000000000001000000001000000000000000000000000000
...................................................................................AACACTATCAGATATTATGAG...................................................................................................................................................................21180.112000010000000000000000000000000000000001000000000000000000000000
..............................AAAACACCACCCTACAAAAG.........................................................................................................................................................................................................................20200.102000000000000000000000000020000000000000000000000000000000000000
..................................................................................................................................GAACATTCGAAGAACTACTTAACAAA...............................................................................................................26200.102002000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CGAAGAACTACTTAACAAATCAA...........................................................................................................23200.102000000000000000000000000000000000010100000000000000000000000000
.......................................................................................................................................TTCGAAGAACTACTTAACAAATCAATA.........................................................................................................27200.102000000000000000000000000000020000000000000000000000000000000000
......................AAGTTTATAAAACACCACCCTACAAAA..........................................................................................................................................................................................................................27200.102001000000000000000000000100000000000000000000000000000000000000
......................AAGTTTATAAAACACCACCCTACAAAAGC........................................................................................................................................................................................................................29200.102002000000000000000000000000000000000000000000000000000000000000
......................AAGTTTATAAAACACCACCC.................................................................................................................................................................................................................................20200.102000000000000000000000000100000000000010000000000000000000000000
..............................................................TCAGGTAGAAAGATTTCATTCAACACT..................................................................................................................................................................................27120.081100000000000000000000000000000000000000000000000000000000000000
.......................................................TGAATGGTCAGGTAGAAAGATTTCATC.........................................................................................................................................................................................27120.081000000000000000000000000000000000000001000000000000000000000000
.......................................................TGAATGGTCAGGTAGAAAGATTTCAT..........................................................................................................................................................................................26120.081000000000000000000000000000000000000001000000000000000000000000
.......................................................TGAATGGTCAGGTAGAAAGATTT.............................................................................................................................................................................................23120.081000000000000000000000000000000000000001000000000000000000000000
.......................................................TGAATGGTCAGGTAGAAAGATTTCA...........................................................................................................................................................................................25120.081000000000001000000000000000000000000000000000000000000000000000
................................................................................................................AAAGAAAACAGGAACACAGAACATTCG................................................................................................................................27130.081001000000000000000000000000000000000000000000000000000000000000
...........................................................TGGTCAGGTAGAAAGATTTCATTATT......................................................................................................................................................................................26130.081000000000000000000000000001000000000000000000000000000000000000
..........................................................ATGGTCAGGTAGAAAGATTTCATTC........................................................................................................................................................................................25130.081000000000000010000000000000000000000000000000000000000000000000
..........................................................ATGGTCAGGTAGAAAGATTTCATT.........................................................................................................................................................................................24130.081000000000000000000000000001000000000000000000000000000000000000
................................................................................................................AAAGAAAACAGGAACACAGAACAT...................................................................................................................................24130.081000000000000000000000000100000000000000000000000000000000000000
......................................................................AAAGATTTCATTCAACACTATCAGATAT.........................................................................................................................................................................28130.081001000000000000000000000000000000000000000000000000000000000000
........................................................GAATGGTCAGGTAGAAAGATTTC............................................................................................................................................................................................23130.081000000000100000000000000000000000000000000000000000000000000000
...........................................................TGGTCAGGTAGAAAGATTTCATTCTT......................................................................................................................................................................................26130.081000000000000010000000000000000000000000000000000000000000000000
................................................................................................................AAAGAAAACAGGAACACAGAACATTC.................................................................................................................................26130.081000000000000000000000000001000000000000000000000000000000000000
.............................................................GTCAGGTAGAAAGATTTCATTCA.......................................................................................................................................................................................23140.071000000000000000000001000000000000000000000000000000000000000000
..........................................................ATGGTCAGGTAGAAAGATTTCA...........................................................................................................................................................................................22140.071000000000000000000000000000100000000000000000000000000000000000
.............................................................GTCAGGTAGAAAGATTTCATTCAACA....................................................................................................................................................................................26140.071000000000000000000000000001000000000000000000000000000000000000
.........................................................AATGGTCAGGTAGAAAGATTT.............................................................................................................................................................................................21140.071000000000000000000000000000000010000000000000000000000000000000
..............................................................TCAGGTAGAAAGATTTCATTC........................................................................................................................................................................................21140.071000010000000000000000000000000000000000000000000000000000000000
................................................................................................................AAAGAAAACAGGAACACAGAACA....................................................................................................................................23140.071000000000000000000000001000000000000000000000000000000000000000
.............................................................GTCAGGTAGAAAGATTTCATTC........................................................................................................................................................................................22140.071000000000001000000000000000000000000000000000000000000000000000
......................................................................AAAGATTTCATTCAACACTATCAG.............................................................................................................................................................................24140.071001000000000000000000000000000000000000000000000000000000000000
..............................................................TCAGGTAGAAAGATTTCATTCAAC.....................................................................................................................................................................................24140.071000000000000000000000000010000000000000000000000000000000000000
.........................................................AATGGTCAGGTAGAAAGATTTC............................................................................................................................................................................................22140.071000000000000000000000000000000000000000000000000000000000000010
......................................................................AAAGATTTCATTCAACACTATCAGAT...........................................................................................................................................................................26140.071000000000000000000000000000100000000000000000000000000000000000
...........................................................TGGTCAGGTAGAAAGATTTCA...........................................................................................................................................................................................21140.071000000000000000000000000000000000100000000000000000000000000000
...........................................................TGGTCAGGTAGAAAGATTTCAT..........................................................................................................................................................................................22140.071000010000000000000000000000000000000000000000000000000000000000
......................................................................AAAGATTTCATTCAACACTATCAGATA..........................................................................................................................................................................27140.071001000000000000000000000000000000000000000000000000000000000000
.............................................................GTCAGGTAGAAAGATTTCATTCAACAT...................................................................................................................................................................................27150.071000000000000000000000000001000000000000000000000000000000000000
..........................................................................ATTTCATTCAACACTATCAGATATTATG.....................................................................................................................................................................28150.071001000000000000000000000000000000000000000000000000000000000000
................................................AGCGCAGTGAATGGTCAGGTAGAA...................................................................................................................................................................................................24150.071000000000000000000000000000010000000000000000000000000000000000
..........................................TACAAAAGCGCAGTGAATGGTCAGG........................................................................................................................................................................................................25160.061000000000000000000000000001000000000000000000000000000000000000
..........................................................................ATTTCATTCAACACTATCAGATATTAAT.....................................................................................................................................................................28160.061000000000000000000000000000000000000100000000000000000000000000
................................................AGCGCAGTGAATGGTCAGGTAGA....................................................................................................................................................................................................23160.061000010000000000000000000000000000000000000000000000000000000000
......................................................................................................................AACAGGAACACAGAACATTCGAAG.............................................................................................................................24170.061000000000000000000000000000100000000000000000000000000000000000
................................................AGCGCAGTGAATGGTCAGGTAG.....................................................................................................................................................................................................22170.061000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................AGGAACACAGAACATTCGAAGAACT.........................................................................................................................25170.061000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................CAGGAACACAGAACATTCGAAGA............................................................................................................................23170.061000000000000000000000000001000000000000000000000000000000000000
......................................................................AAAGATTTCATTCAACACT..................................................................................................................................................................................19170.061000000000000000000000000000100000000000000000000000000000000000
...................................................................................AACACTATCAGATATTATGAGA..................................................................................................................................................................22180.061000000000000000000000000000000000000001000000000000000000000000
..........................................................................................TCAGATATTATGAGATGC...............................................................................................................................................................18180.061000000000000000000000000000000000000001000000000000000000000000
..........................................TACAAAAGCGCAGTGAATGGTCAG.........................................................................................................................................................................................................24180.061000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................AACACAGAACATTCGAAGAACT.........................................................................................................................22180.061000000000000000000000000010000000000000000000000000000000000000
...................................................................................AACACTATCAGATATTATGA....................................................................................................................................................................20180.061000000000000000000000000000000000000001000000000000000000000000
.............................................................................TCATTCAACACTATCAGATATT........................................................................................................................................................................22180.061001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................ACACAGAACATTCGAAGAACT.........................................................................................................................21180.061000000000000000000000000000000000000000000000000000000000000010
...................................................................................AACACTATCAGATATTATGAGATC................................................................................................................................................................24180.061000000000000000000000000000000000000001000000000000000000000000
...................................................................................AACACTATCAGATATTATGAGATTG...............................................................................................................................................................25180.061000010000000000000000000000000000000000000000000000000000000000
...........................................................................TTTCATTCAACACTATCAGATATTA.......................................................................................................................................................................25180.061000000000000000000000000000001000000000000000000000000000000000
...................................................................................AACACTATCAGATATTATGAGATT................................................................................................................................................................24180.061000000000000010000000000000000000000000000000000000000000000000
................................................................................TTCAACACTATCAGATATTA.......................................................................................................................................................................20190.051001000000000000000000000000000000000000000000000000000000000000
.......................................................................................CTATCAGATATTATGAGA..................................................................................................................................................................18190.051000000010000000000000000000000000000000000000000000000000000000
............................ATAAAACACCACCCTACAAAAGCGCAA....................................................................................................................................................................................................................27200.051000000000000000000000000000000000001000000000000000000000000000
...................................................................................................................................AACATTCGAAGAACTACTTAACAAATC.............................................................................................................27200.051000000000000000000000000000000001000000000000000000000000000000
................................................AGCGCAGTGAATGGTCAG.........................................................................................................................................................................................................18200.051000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................GAACATTCGAAGAACTACTTAAC..................................................................................................................23200.051000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CGAAGAACTACTTAACAAATCAATATACG.....................................................................................................29200.051000000000000000000000000010000000000000000000000000000000000000
..........................TTATAAAACACCACCCTACAAAAGC........................................................................................................................................................................................................................25200.051000000000000000000000000100000000000000000000000000000000000000
............................ATAAAACACCACCCTACAAAAGCGC......................................................................................................................................................................................................................25200.051000000000000000000000000000001000000000000000000000000000000000
.....................................CACCCTACAAAAGCGCAG....................................................................................................................................................................................................................18200.051000000000000000000000000000000000000001000000000000000000000000
.........................................................................................................................................CGAAGAACTACTTAACAAATCAATATT.......................................................................................................27200.051000000000000000000000000010000000000000000000000000000000000000
.........................................................................................................................................CGAAGAACTACTTAACAAATCAATATC.......................................................................................................27200.051000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................AACATTCGAAGAACTACTTAACAAA...............................................................................................................25200.051000000000000000000000000100000000000000000000000000000000000000
....................................................................................................................................ACATTCGAAGAACTACTTAACAAATCA............................................................................................................27200.051000000000000000000000000000000000010000000000000000000000000000
.................................ACACCACCCTACAAAAGCGCA.....................................................................................................................................................................................................................21200.051000000000000000000000000000000100000000000000000000000000000000
.........................................................................................................................................CGAAGAACTACTTAACAAATCAATATTA......................................................................................................28200.051000000000000000000000000001000000000000000000000000000000000000
............................................CAAAAGCGCAGTGAATGGTCA..........................................................................................................................................................................................................21200.051000000000000000000000000000000010000000000000000000000000000000
.......................AGTTTATAAAACACCACCCTAC..............................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CGAAGAACTACTTAACAA................................................................................................................18200.051000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................ATTCGAAGAACTACTTAACAAATC.............................................................................................................24200.051000000000000000000000000100000000000000000000000000000000000000
......................................ACCCTACAAAAGCGCAGTGAATGGTTT..........................................................................................................................................................................................................27200.051000000000000000000000000000000000000100000000000000000000000000
...................................ACCACCCTACAAAAGCGCAGTGT.................................................................................................................................................................................................................23200.051000010000000000000000000000000000000000000000000000000000000000
.........................................CTACAAAAGCGCAGTGAATGG.............................................................................................................................................................................................................21200.051000000000000010000000000000000000000000000000000000000000000000
..................................................................................................................................GAACATTCGAAGAACTACTTA....................................................................................................................21200.051000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................CATTCGAAGAACTACTTAACAAATCAAT..........................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................GAACATTCGAAGAACTACTTAACAAT...............................................................................................................26200.051000000000000000000000000010000000000000000000000000000000000000
..........................................................................................................................................GAAGAACTACTTAACAAATCAATATA.......................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................ATTTCATTCAACACTATCAGA............................................................................................................................................................................21200.051000000000000000000000001000000000000000000000000000000000000000
......................AAGTTTATAAAACACCACCCTACAA............................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
......................AAGTTTATAAAACACCACCCTACAAAAG.........................................................................................................................................................................................................................28200.051000000000000000000000000001000000000000000000000000000000000000
droMoj3
TCAAAGA-CCAATTGAATATCGAAATTTATAAGGCTCCACCTTACAAAAGCTCAGTTAACGGCCAAGTGGAAAGATTCCATTCTACCTTATCCGAAATAATGAGATGCCTAAAGAATAACCAAAAACAGAACAGTTTCAAGGAACTATTAGATAGAGCAGTCTACGAATACAATT--------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................GAATAACCAAAAACAGAACAGTTTC.................................................................................................................................2521.002100010
.................................................................................................................GAATAACCAAAAACAGAACAGTTTCA................................................................................................................................2621.002200000
................................................AGCTCAGTTAACGGCCAAGTGG.....................................................................................................................................................................................................2221.002200000
...............AATATCGAAATTTATAAGGCTCC.....................................................................................................................................................................................................................................2330.672100010
.............TGAATATCGAAATTTATAAGGCTCCACC..................................................................................................................................................................................................................................2830.672100010
.....................................................................................................................................................AGATAGAGCAGTCTACGAATACAATC--------------------------------------------------------------------------------------------2630.672200000
.................................................................................................................GAATAACCAAAAACAGAACAGTTT..................................................................................................................................2420.501000010
...................................................TCAGTTAACGGCCAAGTGGAA...................................................................................................................................................................................................2120.501100000
.................................................................................................................GAATAACCAAAAACAGAACAGTTTCAAG..............................................................................................................................2820.501100000
..............GAATATCGAAATTTATAAGGCTCC.....................................................................................................................................................................................................................................2430.331100000
...............................................................................................AATAATGAGATGCCTAAAGAATAACC..................................................................................................................................................2630.331100000
................................................................................TTCTACCTTATCCGAAATAATGAGA..................................................................................................................................................................2530.331100000
..............GAATATCGAAATTTATAAGGCTCCACC..................................................................................................................................................................................................................................2730.331100000
............................................................................................................................................GGAACTATTAGATAGAGCAGTCT........................................................................................................2330.331100000
.....................................................................................CCTTATCCGAAATAATGAGATGCC..............................................................................................................................................................2430.331000010
..............GAATATCGAAATTTATAAGGCTC......................................................................................................................................................................................................................................2330.331100000
.............TGAATATCGAAATTTATAAGGCTCC.....................................................................................................................................................................................................................................2530.331000010
.....................................................................................CCTTATCCGAAATAATGAGATGCCT.............................................................................................................................................................2530.331000010
droGri2
TAGAAAA-CCAATTAAAATCAAAAATCTACACGATACCACCATACAACTCAACAAGCAACGGTCAAGTTGAAAGATTTCATTCAACACTTACCGAAATAATGAGATGTGTGAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................ACCGAAATAATGAGATGTGTG............................................................................................................................................................2150.20110

Generated: 05/18/2015 at 12:42 PM