ID:

dsi_9704

 Coordinate:

2r:20926616-20926765 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.3 -3.7 -3.4

Flybase annnotation

three_prime_UTR [2r_20926451_20926583_-]; CDS [2r_20926584_20926615_-]; exon [2r_20926451_20926615_-]; intron [2r_20926616_20926937_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AACCTGCACGCTTACTAATAGCTACTTTAATTGTCCAGTTAGCAAACTAAATTGAGATTACTCCATGCTGTAAATACTGCTAAAACCCAATTCATGTAATTGGCTCGCTTGCGTTCGTTAATCGTTGTACATATACTTTATACTGATGTTATCTTGAAATAAACCCTTTTTATACCCTCTTACGTCCTTTGTAATTGCAGTCGACACTTGGCATTTCATTCATCTCAAGTGAGATGTTCCCCTGGGCTGA
*******************************************************************..........(((......((((((.....)))))).......)))***************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 M024
male body		 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M023
head
 GSM343915
embryo
...............................................................................................................................................................................................................TTGGCATTTCATTCATCTCAAGTGAGA................ 27 0 1 4.00 4 3 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................TACAGTCGACACTTGGCATTTCATT.............................. 25 1 1 2.00 2 1 0 0 0 0 0 1 0 0 0
......................................................................................................................................................................................................................................GAGATGTTCCCCTGGGCT.. 18 0 1 2.00 2 0 0 0 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................TTCATCTCAAGTGAGATGTTCCCCTGG..... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TTGGCATTTCATTCATCTCAAGTGA.................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................AAGTGAGATGTTCCCCTGG..... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................CTGTAAATACTGCTAAAACC................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................TTCATTCATCTCAAGTGAGATGTT............ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................ATGTAATTGGCTCGCTTGCG......................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................CGTTGTACATATACTTTATA............................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................TACAGTCGACACTTGGCATTTCAT............................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TCCTTTGTAATTCTCGTCGAC............................................. 21 3 4 0.50 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................ATACAGTCGACACTTGGC...................................... 18 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0
....................................................TGAGATCAGTCCATGCTGTT.................................................................................................................................................................................. 20 3 5 0.20 1 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................ACGGATGTAATCATGAAATA......................................................................................... 20 3 9 0.11 1 0 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................CTTTTTATACCCGCTGAGG.................................................................. 19 3 16 0.06 1 0 0 0 0 1 0 0 0 0 0
..........................TTAATTGACCAGAAAGCAAAC........................................................................................................................................................................................................... 21 3 17 0.06 1 0 0 0 0 0 0 0 0 0 1
.......ACCGTTACTAATAGCT................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

TTGGACGTGCGAATGATTATCGATGAAATTAACAGGTCAATCGTTTGATTTAACTCTAATGAGGTACGACATTTATGACGATTTTGGGTTAAGTACATTAACCGAGCGAACGCAAGCAATTAGCAACATGTATATGAAATATGACTACAATAGAACTTTATTTGGGAAAAATATGGGAGAATGCAGGAAACATTAACGTCAGCTGTGAACCGTAAAGTAAGTAGAGTTCACTCTACAAGGGGACCCGACT
*****************************************************************************************************************************************..........(((......((((((.....)))))).......)))******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body
............................................................................GACGATTTTGGGTTAAGTACA......................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................TTTGGGAAAAATGTGGAAGTAT.................................................................... 22 3 3 0.67 2 0 2 0 0 0
..........................................................................................................CGAACGAAAGCAATTAG............................................................................................................................... 17 1 2 0.50 1 0 0 1 0 0
.......................................................................................................................................................................................................................AGTATGTAGAGTTCA.................... 15 1 9 0.22 2 0 0 0 2 0
......................................................................................................................................................................................CCAGGAAAAATTAACGTC.................................................. 18 2 13 0.15 2 0 0 0 0 2

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:20926566-20926815 - dsi_9704 AA----CCTGCACGC--T-TACTAA-TAGCTACTTTAA----TTGTCCAGTTAG-----CAA----------------ACT--AAAT-----------------------TGAGATTA---CTCCATGCTGTAAATACTGCT------------------------AAA----------------------------------------ACCCA-ATTCATGTA-AT-TGGCTC-GCTTGCG--------TT-CGTTAAT---CGTTGT------------AC---------ATATA---------C-TTTATAC--TG--A-TGTTATCT----TGAAATAAA---------------------------------------------------------------------CCCTTTT-TATACC--CTCTTACGTCC----------TTTGTAATTGCAGTCGACACTTGGCATTTCATTCATCTCAAGTGAGATG---------T------TCCCCTGGGC---TGA
droSec2 scaffold_23:320380-320630 - AA----CCTGCACGC--T-TACTAA-TAGCTACTTTTA----TTGTCCAGTTAG-----CAA----------------ACT--AAAT-----------------------TGAGATTA---CTCCATGCTGTAAATACTGCT------------------------AAA----------------------------------------ACCCA-ATTCATGTA-AT-TGGCTC-GCTTGCG--------TT-CGTTAAT---CGTTGT------------AC---------ATATA---------C-TTTATAC--TG--AATGTTATCT----TGAAATAAA---------------------------------------------------------------------CCCTTTT-TATACC--CTCTTACGTCC----------TTTGTAATTGCAGTCGACACTTGGCATTTCATTCATCTCAAGTGAGATG---------T------TTCCCTGGGC---TGA
dm3 chr2R:20446606-20446856 - AA----CCTGCACGC--T-TACTAA-TAGCTACTTTAA----TTGTCCAGTTAG-----CAA----------------GCT--AAAT-----------------------TGAGATTA---CTCCATGCTGTAAATACTGCT------------------------GAA----------------------------------------ACCCA-ATTTATGTA-AT-TGGCTT-GCTTGCG--------TT-CGTTAAT---CGTTGT------------AC---------ATATA---------C-TTTATAC--TG--AATGTTATCC----TGAAATAAA---------------------------------------------------------------------CCCTTTT-TATACC--AATTTACGTCC----------TTTGTAATTGCAGTCGACACTTGGCATTTCATTCATCTCAAGTGAGATG---------T------TCTCCTGGGC---TGA
droEre2 scaffold_4845:21818544-21818788 - AA----CCTGCACGC--T-TACTAA-TAGCTACTTTAA----TTGTCCAGTTAC-----CAA----------------GCT--AAAT-----------------------TAAGATTA---CCCCATGCTGTAAATACTGCT------------------------GAA----------------------------------------ACACA-ATTCATGTA-AT-TGGCTG-GCTTGCG--------TT-TGTTAAT---CGTTGT------------AC---------ATATA---------C-ATTATAC--TG--AATGTGATCT----TGAAATAAA---------------------------------------------------------------------CCTT--TATAAATC-------ACGTCC----------TTTGTAATTGCAGTCGACACTTGGCATTTCATTCATCTCAAGTGAGATG---------T------TCCCCTGGGC---TGA
droYak3 2R:20416212-20416456 - AA----CCTGCACGC--T-TACTAA-TAGCTACTTTAA----TTGTCCAGTTAC-----CAA----------------GCT--AAAT-----------------------TAAGATTA---CCCCATGCTGTAAATACTGCT------------------------GAA----------------------------------------ACCCA-ATTCATGTA-AT-TGGCTG-GCATGCG--------TT-CGTTAAT---CGTTGT------------AC---------ATATA---------C-CTTATAT--TG--AATTTGATCT----TGAAATAAA---------------------------------------------------------------------CCTT--TATAAATT-------ACGTCC----------TTTGTAATTGCAGTCGACACTTGGCATTTCATTCATCTCAAGTGAGATG---------T------TCTCCTGGGC---TGA
droEug1 scf7180000409464:812132-812358 - AA----CCTGCATGC--T-TACTAA-TAGTTACTCTAA---CATGCCCAGCTAC-----CAA----------------CCG--AAAA-----------------------CCAAATTA---CCCCACGCTGTAAATA-------------------------------------------------------------------------------TAAATGTA-AT-TGGCTG-GCTTCCG--------TT-TGTTAAT---CGTTGT------------AC---------ATATA---------T-AATTTAG--CT--AATGTGATTG----TGAAATAAA---------------------------------------------------------------------CCTC-TT-AAAACC-------ACGTCCC----------T-----TTGCAGTCGACACTTGGCATTTCATTCATCTCAAGTGAGATG---------G------CCTCCTCGGA---TGG
droBia1 scf7180000301754:3461070-3461287 + AA----CCTGCATGC--C-TACTAA-TAGCTACTCTATGTGTGTGGCCAGTTT---------------------------------------------------------------------CCCACGCTGTAAATACCGCT------------------------TCA----------------------------------------GCC-------GCACA-AC-TGGCTG-GCTTGCC--------TC-TCCTAAT---CGTTGT------------AC---------TT--G---------C-TTTATAC--TC--ATTGTGATCT----TGAAATAAA---------------------------------------------------------------------CCCC--T-AAAACC-------ACGTCC----------TTTGT-TTTGCAGTCGACACTTGGCATTTCATCCATCTCAAGTGAGATG---------G------C-CCCTGGGA---TGA
droTak1 scf7180000414175:76952-77169 + AA----CCTGCATGC--T-TACTAA-TAGCTACTTAAT---TGTGTCCTGTTAC-----CAA---------------ACCA--AAAA-----------------------AGAAACTA---CCC--CGCTGTAAATA---------------------------------------------------------------------------------CATGTA-ATCTGGCTG-GCTTG----------------------------T------------AC---------ATATG---------T-TCTT-ATACCTATAATAT------------AATAATTA-----------------------------------------------T------------------ACCCC--T-AAAACC-------GCGTCC----------TTTGTTTTTGCAGTCGACACTTGGCATTTCATTCACCTCAAGTGAGATG------ATGG------CCTCCTGGGATGATGA
droEle1 scf7180000491214:4545930-4546187 + AG----CCTGCATGC--T-TACTAA-TAGTTACTTTAA---TATGTCCAGTTAC-----CAA----------------CCA--AAATC-------------T--------GAAAATTA---CCCCACGCTGTAAATACTGCT------------------------ATA----------------------------------------ACCCAAATACTTGTA-AT-TGGCTG-GCTTGCG--------TT-TGTTAAT---CGTTGT------------AC---------ATATG---------TATATATAT--TG--AATGTGATTT----TGAAATAAA---------------------------------------------------------------------CCTCTTTACAAACC-------ATGTCCCT-------TTTTGTTGTTGCAGTCGACACTTGGCATTTCATTCATCTCAAGTGAGAA-----TGAG-G------AGTCCTGGAA---TGA
droRho1 scf7180000776849:139014-139258 - AA----CCTGCATGC--T-TACTAA-TAGTTACTTTAA---TATGTCCAGTTAC-----CAA----------------CCA--AAAAC----------------------TCAAATTA---CCCCACGCTGTAAATACTGCT------------------------TAA---------------------------------A------ACCCA-ATACCTGTA-AT-TGGCTG-GCTTGCG--------TT-TGTTAAC---CGTTTT------------AT---------ATATG---------T------AT--TA--AATGTGATGT----TGAAATAAA---------------------------------------------------------------------CCTTTTT-AAAACC-------ATGCCCC---------TTTGTTATTGCAGTCGACACTTGGCACTTCATTCATCTCAAGTGAGAGG---------T------CCTCTTGGAA---TGA
droFic1 scf7180000453342:298451-298687 - AA----CCAGCATGC--C-TACTAA-TAGTTAGCTTAA---GTTGTCCTGTTAC-----CAA----------------CCA--AAAT-----------------------C--AATTA---C-CCACGCTGTAAATACTGCT------------------------AAA---------------------------------C------ACCCA-ACACTTGTA-AT-TGGCTG-GCCTGCG--------TT-TAATAAT---CGTTAT------------AC---------GTAC---------------------TC--ATAGTGATGT----TGAAATAAA---------------------------------------------------------------------CCTCTTT-AAAATC-------ACATCCC---------TTTGTTATTGCAGTCGACACTTGGCATTTCATTCACCTCAAGTGAAATG---------T------CCTACTGGAG---TGG
droKik1 scf7180000302277:724308-724547 + AA----CCTGCATGC--T-TACTAA-TAACTACTATAG---TGCGTCCAGTTTC-----CAA----------------CCA--AAAA-----------------------TTAGATTA---TCCCACGCTGTAAATACTGCA------------------------AAA---------------------------------TACT---CCCCC-GTTTATGTA-AT-TGGCCT-----------------------AAT---TGTT--------------------------------------------ACGT--TA--AATGTGCTGG----TGAAATAAACT-------------------------------------------------------------------TAAACCT-AAATCC-------ATGTCCCTTTCTCTCTCTCGCTATTGCAGCCGACACTTGGCATTTCATTCACCTCAAGTAGGGTG------ATGC------CGCTCCGTGA---TGA
droAna3 scaffold_13266:15996283-15996527 - AA----CCTGCATGC--T-TACTAA-TATT------AA------GTTCTGTTCC-----GAA----------------CCC--AAAT-----------------------CGA-ATTA--CCCCCACGCTGTAAATACTGCT------------------------AAA---------------------------------CAC----CCCCA-ATACATGTA-AT-TGGCTT-GCTTGCA--------AT-TGTTAATAGTCGTTTT------------AG---------AAAT---------------ATAC--TG--AATGTGATTTTTTATGAAATAAA---------------------------------------------------------------------CTCCGTT-AAAACC-------ATGTCCT--------TTTTGTTGTTACAGTCGACACTTGGCATTTCATTCATCTCAAGTGAGATG---------T------CGCTCTGGGA---TGA
droBip1 scf7180000396567:482897-483141 - AA----CCTGCATGC--T-TACTAA-TAATAA------------GTTCTGTCCC-----GAA----------------CCC--AAAT-----------------------CGA-ATTA--CCCCCACGCTGTAAATACTGCTCT----------------------AAA---------------------------------CAC----CTTTA-ATACATGTA-AT-TGGCTT-GCTTGCG--------TT-TGTAAATAGTCGTTTT------------AG---------AAAT-----------------AC--AG--AATACAATAT----CGAAATAAACA-------------------------------------------------------------------CCACTTT-AAAACC-------ATGTCCTTT------TTTTATTGTTACAGTCGACACTTGGCATTTCATTCATCTCAAGTGAGATG---------T------CGCTCTGGGA---TGA
dp5 3:17256354-17256579 + AA----CCCGCATGC--T-T--TAATTTGCTACTAAAC---TAT-------CACAAACT-------------------CCAAAAAAC-----------------------TACAACTC---TCC--CACTGTAAATAATCCT------------------------AAT----------------------------------------ATGTACCTACATGTA-AT-GGGCTTTGCTTTATT-------CT-TTTCAAC---TCTTGT------------AT---------ATATG---------C-CTT------TA--A------ATA----TGAAATAAA---------------------------------------------------------------------TATCGTT-AAACTC-------ATATTCC--------TCTTGTTCTTGCAGTCGACACATGGCATTTCATTCACCTCAAGTGA-------------------------TGGGA---TGG
droPer2 scaffold_31:533720-533945 - AA----CCCGCATGC--T-T--TAATTTGCTACTAAAC---TAT-------CACAAATT-------------------CCAAAAAAC-----------------------TACAACTC---TCC--CACTGTAAATAATCCT------------------------AAT----------------------------------------ATGTACCTACATGTA-AT-GGGCTTTGCTTTATT-------CT-TTTCAAC---TCATGT------------AT---------ATATG---------C-CTT------TA--A------ATA----TGAAATAAA---------------------------------------------------------------------TATCGTT-AAACTC-------ATATTCC--------TCTTGTTCTTGCAGTCGACACATGGCATTTCATTCACCTCAAGTGA-------------------------TGGGA---TGG
droWil2 scf2_1100000004512:2064493-2064787 - AA----CCTGCATGC--C-TATACC-CCGCTACCTAT-GTATATATCT-TACCT-----GAA--------------------------------------------------------------CCCGCTATATATATGTAT----ATATATTTATATATATGTATCTATATCTATATATGCTTACCAATAATGCAACTAAATACA---CGTTC-ACACTTGTAAAT-TGGCTT----------------------------------------------------------------------------TA-------------------------TAATAAATTCCGTCAGAAATATGTATATATAATGTAATTGTAGATGTCGATATATT--------------------CTTT--T--------------ATATAT---------TTTTCTTTTCGCAGTCGATACATGGCATTTTATTCATCTCAAGTGAAAGGTGCTTGAT-GAATTCTTCTTCGAGAC---AGA
droVir3 scaffold_12875:14716340-14716589 + AT----TCTGCATGC--TATACTAA-CC-------------------CAAAG-A-----CAAATCAAATCGACACAAACCA--AAAC------------------------CA-AATG---T--CCTGCTGTAAATATTGCT------------------------TTA---------------------------------GATC--TATGCACACTTTTGTA-AT-TGGCTTTGCTTGTT---------------TAT---TGTT-TATTTATTGTTAAAT---------GTA--------------------------------ATTG----T-TAATAAA-----------------------------------------------TATTGTGTAATTTGTAAACAAATCTCTT---------------CTATCT----------ATTGT-CTTACAGTCGACACTTGGCATTTCATACATCTCAAGTGAACCG---------C------ACGCGCGACT---GGA
droMoj3 scaffold_6496:10189242-10189533 + AAAAATACTGCATGCGCTTTACTAA-TCAATGCCATAA---------------A-AATA-------------------CCA--AAAAT---------A---TACGTTTAAAGAAAATA---CCG----------------CATTGAACTTATTAAGATGTGATGTTTTGTATGTAAATATGA-----------------------T---AACGA-CTTTTTGTA-AT-TGGCTCTGG----G---TTTTGTTCTATTTAT------TAT------------GCGGATTGTATATACATCAAATAAAC-TATATAA--TG--TATATATCTT----TTATATAAA---------------------------------------------------------------------ACTGTT--CAATCTTCA----ATATTCTC-------TCTTGT-TTTGCAGTCGACACTTGGCATTTCATACATCTCAAGTAAATTG---------C------------AGAA---TTA
droGri2 scaffold_15245:14724392-14724652 + AA----CCCGCATGC--TACACTAA-CCAATAA------------------C-CAAAAT-------------------CCAAAAAATTACCAAACCCAAAGC--------ACAATTTGTAAA--CCTGCTGTGAATAATGCT------------------------TAGTCACTAAA--------------------CT-AGTACAAGAATACA-CTTTTTTTA-AT-TGGCTT-TCTTTCTGCTTTCTGTTTAGTTAAT---TGTTGT------------TT---------ATAG------------TTCA-AA--TA--AATGTT--TA----TGAT------G----------------------------------------------------CCATTTA-----AAATCTGT-T-TAAA------------TCTC---------TTTGT-TTTACAGTCGACACTTGGCACTTCATCCATCTGAAGTGAGTTG--------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AA----CCTGCACGC--T-TACTAA-TAGCTACTTTAA----TTGTCCAGTTAG-----CAA----------------ACT--AAAT-----------------------TGAGATTA---CTCCATGCTGTAAATACTGCT------------------------AAA----------------------------------------ACCCA-ATTCATGTA-AT-TGGCTC-GCTTGCG--------TT-CGTTAAT---CGTTGT------------AC---------ATATA---------C-TTTATAC--TG--A-TGTTATCT----TGAAATAAA---------------------------------------------------------------------CCCTTTT-TATACC--CTCTTACGTCC----------TTTGTAATTGCAGTCGACACTTGGCATTTCATTCATCTCAAGTGAGATG---------T------TCCCCTGGGC---TGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCATTTCATTCATCTCAAGTGAGA..................................2714.00400000003010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATG---------T------TCCCCTGGGC---T..1812.00201100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATCTCAAGTGAGATG---------T------TCCCCTGG........2711.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCATTTCATTCATCTCAAGTGA....................................2511.00100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGAGATG---------T------TCCCCTGG........1911.00100010000000000000
................................................................................................................................CTGTAAATACTGCT------------------------AAA----------------------------------------ACC...............................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATTCATCTCAAGTGAGATG---------T------T...............2411.00100010000000000000
...........................................................................................................................................................................................................................ATGTA-AT-TGGCTC-GCTTGCG--------.........................................................................................................................................................................................................................................................................................2011.00100000000010000000
.......................................................................................................................................................................................................................................................................CGTTGT------------AC---------ATATA---------C-TTTATA.........................................................................................................................................................................................................................2011.00100000100000000000
droSec2
AA----CCTGCACGC--T-TACTAA-TAGCTACTTTTA----TTGTCCAGTTAG-----CAA----------------ACT--AAAT-----------------------TGAGATTA---CTCCATGCTGTAAATACTGCT------------------------AAA----------------------------------------ACCCA-ATTCATGTA-AT-TGGCTC-GCTTGCG--------TT-CGTTAAT---CGTTGT------------AC---------ATATA---------C-TTTATAC--TG--AATGTTATCT----TGAAATAAA---------------------------------------------------------------------CCCTTTT-TATACC--CTCTTACGTCC----------TTTGTAATTGCAGTCGACACTTGGCATTTCATTCATCTCAAGTGAGATG---------T------TTCCCTGGGC---TGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTGAGATG---------T------TTCCCTGGGC---T..2315.0050140
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTGAGATG---------T------TTCCCTGGGC---...2213.0030120
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTTGGCATTTCATTCAT.............................................1911.0010010
.............................................................................................................................................................................................................................GTA-AT-TGGCTC-GCTTGCG--------TT-CGTTA.................................................................................................................................................................................................................................................................................2511.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGATG---------T------TTCCCTGGGC---T..2011.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGTGAGATG---------T------TTCCCTGGGC---TG.2611.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGTGAGATG---------T------TTCCCT..........2011.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGTGAGATG---------T------TTCCCTGGGC---T..2411.0010010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTGAGATG---------T------TTCCCTGG........2011.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGATG---------T------TTCCCTGGGC---T..2111.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGACACTTGGCATTTCATT................................................2211.0010010
.......................................................................................................................................................................................................................................................................................................................ATAC--TG--AATGTTATCT----TGAAATAAA---------------------------------------------------------------------CC....................................................................................................................2711.0010010
...........................................................................................................................................................................................................................ATGTA-AT-TGGCTC-GCTTGC..................................................................................................................................................................................................................................................................................................1911.0010010
.....................................................................................AT-----------------------TGAGATTA---CTCCATGCT.................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGAGATG---------T------TTCCCTGGGC---...2111.0010010
.......................................................................................................................................................................................................................ATTCATGTA-AT-TGGCTC-GCTTGC..................................................................................................................................................................................................................................................................................................2311.0010010
.......................................................................................................................................................................................................................ATTCATGTA-AT-TGGCTC-GCTT....................................................................................................................................................................................................................................................................................................2111.0010010
dm3
AA----CCTGCACGC--T-TACTAA-TAGCTACTTTAA----TTGTCCAGTTAG-----CAA----------------GCT--AAAT-----------------------TGAGATTA---CTCCATGCTGTAAATACTGCT------------------------GAA----------------------------------------ACCCA-ATTTATGTA-AT-TGGCTT-GCTTGCG--------TT-CGTTAAT---CGTTGT------------AC---------ATATA---------C-TTTATAC--TG--AATGTTATCC----TGAAATAAA---------------------------------------------------------------------CCCTTTT-TATACC--AATTTACGTCC----------TTTGTAATTGCAGTCGACACTTGGCATTTCATTCATCTCAAGTGAGATG---------T------TCTCCTGGGC---TGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTGAGATG---------T------TCTCCTGGGC---...2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACTTGGCATTTCATTCATCTC..........................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGTGAGATG---------T------TCTCCTGGGC---TGA2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGAGATG---------T------TCTCCTGGGC---...2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000010000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATG---------T------TCTCCTGGGC---TGA2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTGAGATG---------T------TCTCCTGGGC---T..2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................GTTATCC----TGAAATAAA---------------------------------------------------------------------CCCTT.................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGTGAGATG---------T------TCTCCTGGGC---...2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCATCTCAAGTGAGATG---------T------................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTCC----------TTTGTAATTGCAGT...................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATTGCAGTCGACACTTGG.........................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000
..............................................................................................................................................................................................................................TA-AT-TGGCTT-GCTTGCG--------TT-CG....................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000
.........................................................................................................................................................................................................................................T-GCTTGCG--------TT-CGTTAAT---CGTT........................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................C----------TTTGTAATTGCAGTCGACAC.............................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACACTTGGCATTTCATTCATCT...........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAATTGCAGTCGACACTTG..........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................AAATACTGCT------------------------GAA----------------------------------------ACCCA-ATTT........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGCATTTCATTCATCT...........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATG---------T------TCTCCTGGGC---TGA1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TTA---CTCCATGCTGTAAATAC.........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTAATTGCAGTCGACACT............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGATG---------T------TCTCCTGGG.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTTGGCATTTCATTCATCTCAA........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................TG--AATGTTATCC----TGAAATAAA---------------------------------------------------------------------CCC...................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCAGTCGACACTTGGC........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATG---------T------TCTCCTGGGC---...1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTTGGCATTTCATTCATC............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTCGACACTTGGCA.......................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ATACC--AATTTACGTCC----------TTTGTA...........................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TTTATAC--TG--AATGTTATCC----TGAAAT..............................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGTGAGATG---------T------TCTCCTGGGC---T..2411.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGACACTTGGCATTT....................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGCATTTCATTCATCTCAAGTGA....................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................AA----TTGTCCAGTTAG-----CAA----------------GCT--................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGTGAGATG---------T------TCTCCTGG........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................A-AT-TGGCTT-GCTTGCG--------TT-CGT...................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACGTCC----------TTTGTAATTG.......................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ATACC--AATTTACGTCC----------TTTGT............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATG---------T------TCTCCTGGGC---TGA1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TT-GCTTGCG--------TT-CGTTAAT---CGTTGT------------AC---------A..............................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAATTGCAGTCGACACT............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATCTCAAGTGAGATG---------T------TCTCCTGG........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TGCT------------------------GAA----------------------------------------ACCCA-ATTTATGTA-AT-TGGC...........................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCAAGTGAGATG---------T------TCTCCT..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................................................................................................................................................................TTATAC--TG--AATGTTATCC----TGAAATAAA---------------------------------------------------------------------CC....................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTGAGATG---------T------TCTCCTGGG.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TGAGATTA---CTCCATGCTGTAAA............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTCC----------TTTGTAATTGCAG....................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TTGCG--------TT-CGTTAAT---CGTTGT------------..........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
.................................................GTTAG-----CAA----------------GCT--AAAT-----------------------TGAGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TAA----TTGTCCAGTTAG-----CAA----------------GCT--................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................TGTAAATACTGCT------------------------GAA----------------------------------------ACCCA-A...........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGACACTTGGCATTTCATTCATC............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCC----------TTTGTAATTGCAG....................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................ACC--AATTTACGTCC----------TTTGTAATTGC......................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACGTCC----------TTTGTAATTGCA.....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTCC----------TTTGTAATTGCAG....................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
droEre2
AA----CCTGCACGC--T-TACTAA-TAGCTACTTTAA----TTGTCCAGTTAC-----CAA----------------GCT--AAAT-----------------------TAAGATTA---CCCCATGCTGTAAATACTGCT------------------------GAA----------------------------------------ACACA-ATTCATGTA-AT-TGGCTG-GCTTGCG--------TT-TGTTAAT---CGTTGT------------AC---------ATATA---------C-ATTATAC--TG--AATGTGATCT----TGAAATAAA---------------------------------------------------------------------CCTT--TATAAATC-------ACGTCC----------TTTGTAATTGCAGTCGACACTTGGCATTTCATTCATCTCAAGTGAGATG---------T------TCCCCTGGGC---TGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGTGAGATG---------T------TCCCCTGGGC---TGA26135.003500000035
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTGAGATG---------T------TCCCCTGGGC---T..2314.0040000220
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTGAGATG---------T------TCCCCTGGGC---...2212.0020100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGTGAGATG---------T------TCCCCTGGGC---T..2511.0010100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCATTCATCTCAAGTGA....................................2011.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGATG---------T------TCCCCTGGGC---C..2111.0010100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGTGAGATG---------T------TCCCCTGGGC---TG.2611.0010001000
droYak3
AA----CCTGCACGC--T-TACTAA-TAGCTACTTTAA----TTGTCCAGTTAC-----CAA----------------GCT--AAAT-----------------------TAAGATTA---CCCCATGCTGTAAATACTGCT------------------------GAA----------------------------------------ACCCA-ATTCATGTA-AT-TGGCTG-GCATGCG--------TT-CGTTAAT---CGTTGT------------AC---------ATATA---------C-CTTATAT--TG--AATTTGATCT----TGAAATAAA---------------------------------------------------------------------CCTT--TATAAATT-------ACGTCC----------TTTGTAATTGCAGTCGACACTTGGCATTTCATTCATCTCAAGTGAGATG---------T------TCTCCTGGGC---TGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................ATTCATGTA-AT-TGGCTG-GC......................................................................................................................................................................................................................................................................................................1911.00100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTGAGATG---------T------TCTCCTGGGC---T..2311.00100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATG---------T------TCTCCTGGGC---TGA2111.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCC----------TTTGTAATTGCAGTC..................................................................1911.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGAGATG---------T------TCTCCTGGGC---T..2211.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCATCTCAAGTGAGAT.................................1911.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGTGAGATG---------T------TCTCCTGGGC---T..2511.00100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTGAGATG---------T------TCTCCTGGGC---C..2311.00100100000000
droEug1
AA----CCTGCATGC--T-TACTAA-TAGTTACTCTAA---CATGCCCAGCTAC-----CAA----------------CCG--AAAA-----------------------CCAAATTA---CCCCACGCTGTAAATA-------------------------------------------------------------------------------TAAATGTA-AT-TGGCTG-GCTTCCG--------TT-TGTTAAT---CGTTGT------------AC---------ATATA---------T-AATTTAG--CT--AATGTGATTG----TGAAATAAA---------------------------------------------------------------------CCTC-TT-AAAACC-------ACGTCCC----------T-----TTGCAGTCGACACTTGGCATTTCATTCATCTCAAGTGAGATG---------G------CCTCCTCGGA---TGGSizeHit CountTotal NormTotal
No Reads
droBia1
AA----CCTGCATGC--C-TACTAA-TAGCTACTCTATGTGTGTGGCCAGTTT---------------------------------------------------------------------CCCACGCTGTAAATACCGCT------------------------TCA----------------------------------------GCC-------GCACA-AC-TGGCTG-GCTTGCC--------TC-TCCTAAT---CGTTGT------------AC---------TT--G---------C-TTTATAC--TC--ATTGTGATCT----TGAAATAAA---------------------------------------------------------------------CCCC--T-AAAACC-------ACGTCC----------TTTGT-TTTGCAGTCGACACTTGGCATTTCATCCATCTCAAGTGAGATG---------G------C-CCCTGGGA---TGASizeHit CountTotal NormTotal
No Reads
droTak1
AA----CCTGCATGC--T-TACTAA-TAGCTACTTAAT---TGTGTCCTGTTAC-----CAA---------------ACCA--AAAA-----------------------AGAAACTA---CCC--CGCTGTAAATA---------------------------------------------------------------------------------CATGTA-ATCTGGCTG-GCTTG----------------------------T------------AC---------ATATG---------T-TCTT-ATACCTATAATAT------------AATAATTA-----------------------------------------------T------------------ACCCC--T-AAAACC-------GCGTCC----------TTTGTTTTTGCAGTCGACACTTGGCATTTCATTCACCTCAAGTGAGATG------ATGG------CCTCCTGGGATGATGASizeHit CountTotal NormTotal
No Reads
droEle1
AG----CCTGCATGC--T-TACTAA-TAGTTACTTTAA---TATGTCCAGTTAC-----CAA----------------CCA--AAATC-------------T--------GAAAATTA---CCCCACGCTGTAAATACTGCT------------------------ATA----------------------------------------ACCCAAATACTTGTA-AT-TGGCTG-GCTTGCG--------TT-TGTTAAT---CGTTGT------------AC---------ATATG---------TATATATAT--TG--AATGTGATTT----TGAAATAAA---------------------------------------------------------------------CCTCTTTACAAACC-------ATGTCCCT-------TTTTGTTGTTGCAGTCGACACTTGGCATTTCATTCATCTCAAGTGAGAA-----TGAG-G------AGTCCTGGAA---TGASizeHit CountTotal NormTotal
No Reads
droRho1
AA----CCTGCATGC--T-TACTAA-TAGTTACTTTAA---TATGTCCAGTTAC-----CAA----------------CCA--AAAAC----------------------TCAAATTA---CCCCACGCTGTAAATACTGCT------------------------TAA---------------------------------A------ACCCA-ATACCTGTA-AT-TGGCTG-GCTTGCG--------TT-TGTTAAC---CGTTTT------------AT---------ATATG---------T------AT--TA--AATGTGATGT----TGAAATAAA---------------------------------------------------------------------CCTTTTT-AAAACC-------ATGCCCC---------TTTGTTATTGCAGTCGACACTTGGCACTTCATTCATCTCAAGTGAGAGG---------T------CCTCTTGGAA---TGASizeHit CountTotal NormTotal
No Reads
droFic1
AA----CCAGCATGC--C-TACTAA-TAGTTAGCTTAA---GTTGTCCTGTTAC-----CAA----------------CCA--AAAT-----------------------C--AATTA---C-CCACGCTGTAAATACTGCT------------------------AAA---------------------------------C------ACCCA-ACACTTGTA-AT-TGGCTG-GCCTGCG--------TT-TAATAAT---CGTTAT------------AC---------GTAC---------------------TC--ATAGTGATGT----TGAAATAAA---------------------------------------------------------------------CCTCTTT-AAAATC-------ACATCCC---------TTTGTTATTGCAGTCGACACTTGGCATTTCATTCACCTCAAGTGAAATG---------T------CCTACTGGAG---TGGSizeHit CountTotal NormTotal
No Reads
droKik1
AA----CCTGCATGC--T-TACTAA-TAACTACTATAG---TGCGTCCAGTTTC-----CAA----------------CCA--AAAA-----------------------TTAGATTA---TCCCACGCTGTAAATACTGCA------------------------AAA---------------------------------TACT---CCCCC-GTTTATGTA-AT-TGGCCT-----------------------AAT---TGTT--------------------------------------------ACGT--TA--AATGTGCTGG----TGAAATAAACT-------------------------------------------------------------------TAAACCT-AAATCC-------ATGTCCCTTTCTCTCTCTCGCTATTGCAGCCGACACTTGGCATTTCATTCACCTCAAGTAGGGTG------ATGC------CGCTCCGTGA---TGASizeHit CountTotal NormTotal
No Reads
droAna3
AA----CCTGCATGC--T-TACTAA-TATT------AA------GTTCTGTTCC-----GAA----------------CCC--AAAT-----------------------CGA-ATTA--CCCCCACGCTGTAAATACTGCT------------------------AAA---------------------------------CAC----CCCCA-ATACATGTA-AT-TGGCTT-GCTTGCA--------AT-TGTTAATAGTCGTTTT------------AG---------AAAT---------------ATAC--TG--AATGTGATTTTTTATGAAATAAA---------------------------------------------------------------------CTCCGTT-AAAACC-------ATGTCCT--------TTTTGTTGTTACAGTCGACACTTGGCATTTCATTCATCTCAAGTGAGATG---------T------CGCTCTGGGA---TGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATG---------T------CGCTCTGGGA---TG.1812.002200000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATG---------T------CGCTCTGGGA---TGA1912.002200000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATG---------T------CGCTCTGGGA---T..1812.002020000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCATTCATCTCAAGTG.....................................1911.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTCAAGTGAGATG---------T------CGCTCTGGGA---...2711.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGATG---------T------CGCTCTGGGA---...1911.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAGATG---------T------CGCTCTGG........1811.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGCATTTCATTCATCTCAA........................................2211.001010000
droBip1
AA----CCTGCATGC--T-TACTAA-TAATAA------------GTTCTGTCCC-----GAA----------------CCC--AAAT-----------------------CGA-ATTA--CCCCCACGCTGTAAATACTGCTCT----------------------AAA---------------------------------CAC----CTTTA-ATACATGTA-AT-TGGCTT-GCTTGCG--------TT-TGTAAATAGTCGTTTT------------AG---------AAAT-----------------AC--AG--AATACAATAT----CGAAATAAACA-------------------------------------------------------------------CCACTTT-AAAACC-------ATGTCCTTT------TTTTATTGTTACAGTCGACACTTGGCATTTCATTCATCTCAAGTGAGATG---------T------CGCTCTGGGA---TGASizeHit CountTotal NormTotal
No Reads
dp5
AA----CCCGCATGC--T-T--TAATTTGCTACTAAAC---TAT-------CACAAACT-------------------CCAAAAAAC-----------------------TACAACTC---TCC--CACTGTAAATAATCCT------------------------AAT----------------------------------------ATGTACCTACATGTA-AT-GGGCTTTGCTTTATT-------CT-TTTCAAC---TCTTGT------------AT---------ATATG---------C-CTT------TA--A------ATA----TGAAATAAA---------------------------------------------------------------------TATCGTT-AAACTC-------ATATTCC--------TCTTGTTCTTGCAGTCGACACATGGCATTTCATTCACCTCAAGTGA-------------------------TGGGA---TGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCACCTCAAGTGA-------------------------TGGGA---TG.2315.0050500000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACATGGCATTTCATTCACCTCAAGT......................................2813.0030120000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCATTCACCTCAAGTGA-------------------------TGGGA---TG.2711.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTCACCTCAAGTGA-------------------------TGGGA---TG.2411.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTTCATTCACCTCAAGT......................................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCTCAAGTGA-------------------------TGGGA---T..1911.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCATTCACCTCAAGTGA-------------------------TGGGA---...2511.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TC-------ATATTCC--------TCTTGTTCTTGC......................................................................2111.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACATGGCATTTCATTCACCTCAA........................................2611.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGCATTTCATTCACCTCAAGT......................................2411.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACATGGCATTTCATTCACCTCAAGT......................................2711.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCACCTCAAGTGA-------------------------TGGGA---...2111.0010100000000
.............................................................................................................................................................................................................................................................TTTCAAC---TCTTGT------------AT---------ATATG---------C-...............................................................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCACCTCAAGTGA-------------------------TGGGA---TG.2211.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACCTCAAGTGA-------------------------TGGGA---TG.2111.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATGGCATTTCATTCACCTCAAGT......................................2611.0010000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACATGGCATTTCATTCACCTCAAGTG.....................................2911.0010100000000
droPer2
AA----CCCGCATGC--T-T--TAATTTGCTACTAAAC---TAT-------CACAAATT-------------------CCAAAAAAC-----------------------TACAACTC---TCC--CACTGTAAATAATCCT------------------------AAT----------------------------------------ATGTACCTACATGTA-AT-GGGCTTTGCTTTATT-------CT-TTTCAAC---TCATGT------------AT---------ATATG---------C-CTT------TA--A------ATA----TGAAATAAA---------------------------------------------------------------------TATCGTT-AAACTC-------ATATTCC--------TCTTGTTCTTGCAGTCGACACATGGCATTTCATTCACCTCAAGTGA-------------------------TGGGA---TGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................AAC-----------------------TACAACTC---TCC--CACTGTAAA............................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACATGGCATTTCATTCACCTCAAGT......................................2811.001001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACATGGCATTTCATTCAC.............................................2111.001010000
.................................................................................................................................................................................................................................................................................................................................................AAATAAA---------------------------------------------------------------------TATCGTT-AAACT.........................................................................................................1911.001100000
....................................................................................AAC-----------------------TACAACTC---TCC--CACTGTAAATAATC.......................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTCATTCACCTCAAGT......................................1911.001001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATGGCATTTCATTCACCTCAAGT......................................2611.001001000
....................................................................................AAC-----------------------TACAACTC---TCC--CACT.................................................................................................................................................................................................................................................................................................................................................................................................................1820.501100000
droWil2
AA----CCTGCATGC--C-TATACC-CCGCTACCTAT-GTATATATCT-TACCT-----GAA--------------------------------------------------------------CCCGCTATATATATGTAT----ATATATTTATATATATGTATCTATATCTATATATGCTTACCAATAATGCAACTAAATACA---CGTTC-ACACTTGTAAAT-TGGCTT----------------------------------------------------------------------------TA-------------------------TAATAAATTCCGTCAGAAATATGTATATATAATGTAATTGTAGATGTCGATATATT--------------------CTTT--T--------------ATATAT---------TTTTCTTTTCGCAGTCGATACATGGCATTTTATTCATCTCAAGTGAAAGGTGCTTGAT-GAATTCTTCTTCGAGAC---AGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAAGGTGCTTGAT-GA.....................1818.00800170
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTCAAGTGAAAGGTGCTT...........................2112.00200020
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAAGGTGCTTGAT-GAATTCTTCTT............2712.00200020
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTCAAGTGAAAGGTGCT............................2012.00200110
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAAAGGTGCTTGAT-GA.....................1912.00200020
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGAAAGGTGCTTGAT-GAATTCTT...............2611.00100100
...........................................................................................................................................................................................AATAATGCAACTAAATACA---CGTTC-............................................................................................................................................................................................................................................................................................................................2411.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAAGGTGCTTGAT-GAAT...................2011.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAAGGTGCTTGAT-GAATT..................2111.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAAGGTGCTTGAT-GAATTCTT...............2411.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGAAAGGTGCTTGAT-GAA....................2111.00100100
........................................................................................................................................................................................................................................................................................................................................................TTCCGTCAGAAATATGTATATATAAT.................................................................................................................................................................2611.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTATTCATCTCAAGTGAAAGGT...............................2511.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGAAAGGTGCTTGAT-GAAT...................2211.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCAAGTGAAAGGTGCT............................1911.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAAAGGTGCTTGAT-GAATT..................2211.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTCAAGTGAAAGGTGCTTGA.........................2311.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAAAGGTGCTTGAT-G......................1811.00100010
..........................................ATATCT-TACCT-----GAA--------------------------------------------------------------CCCGCT.................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAAGGTGCTTGAT-GAA....................1811.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGTGCTTGAT-GAATTCTTCTTCGA.........2711.00101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGTGAAAGGTGCTT...........................1820.50100010
droVir3
AT----TCTGCATGC--TATACTAA-CC-------------------CAAAG-A-----CAAATCAAATCGACACAAACCA--AAAC------------------------CA-AATG---T--CCTGCTGTAAATATTGCT------------------------TTA---------------------------------GATC--TATGCACACTTTTGTA-AT-TGGCTTTGCTTGTT---------------TAT---TGTT-TATTTATTGTTAAAT---------GTA--------------------------------ATTG----T-TAATAAA-----------------------------------------------TATTGTGTAATTTGTAAACAAATCTCTT---------------CTATCT----------ATTGT-CTTACAGTCGACACTTGGCATTTCATACATCTCAAGTGAACCG---------C------ACGCGCGACT---GGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCG---------C------ACGCGCGACT---GGA2012.002001000000000000000100000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCG---------C------ACGCGCGACT---GGA1912.002002000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCATTTCATACATCTCAAGT......................................2212.002000100000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAACCG---------C------ACGCGCGAC.......1911.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACCG---------C------ACGCGCGACT---...1911.001000000000010000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACATCTCAAGTGAACCG---------C------AC..............2111.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCAAGTGAACCG---------C------ACGCGCGACT---...2611.001000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCAAGTGAACCG---------C------ACGCG...........2111.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AATCTCTT---------------CTATCT----------ATTGT-CTTA.......................................................................2311.001000000000000000000000001000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATACATCTCAAGTGAACCG---------C------ACGCGC..........2711.001000000000000000000000000000000010000000000000000000000000000000
.............................................................AATCAAATCGACACAAACCA--AAAC------------------------CA-AAT..............................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTCATACATCTCAAGT......................................1911.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATCTCAAGTGAACCG---------C------ACGCGC..........2611.001000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCTCAAGTGAACCG---------C------ACGCGC..........2411.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TCTT---------------CTATCT----------ATTGT-CTTACAG....................................................................2211.001000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................GGCTTTGCTTGTT---------------TAT---TGTT-.......................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGAACCG---------C------ACGCGCGACT---...2111.001000000000000000010000000000000000000000000000000000000000000000
droMoj3
AAAAATACTGCATGCGCTTTACTAA-TCAATGCCATAA---------------A-AATA-------------------CCA--AAAAT---------A---TACGTTTAAAGAAAATA---CCG----------------CATTGAACTTATTAAGATGTGATGTTTTGTATGTAAATATGA-----------------------T---AACGA-CTTTTTGTA-AT-TGGCTCTGG----G---TTTTGTTCTATTTAT------TAT------------GCGGATTGTATATACATCAAATAAAC-TATATAA--TG--TATATATCTT----TTATATAAA---------------------------------------------------------------------ACTGTT--CAATCTTCA----ATATTCTC-------TCTTGT-TTTGCAGTCGACACTTGGCATTTCATACATCTCAAGTAAATTG---------C------------AGAA---TTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATACATCTCAAGTAAATTG---------C------------AGA.......2411.001100000
droGri2
AA----CCCGCATGC--TACACTAA-CCAATAA------------------C-CAAAAT-------------------CCAAAAAATTACCAAACCCAAAGC--------ACAATTTGTAAA--CCTGCTGTGAATAATGCT------------------------TAGTCACTAAA--------------------CT-AGTACAAGAATACA-CTTTTTTTA-AT-TGGCTT-TCTTTCTGCTTTCTGTTTAGTTAAT---TGTTGT------------TT---------ATAG------------TTCA-AA--TA--AATGTT--TA----TGAT------G----------------------------------------------------CCATTTA-----AAATCTGT-T-TAAA------------TCTC---------TTTGT-TTTACAGTCGACACTTGGCACTTCATCCATCTGAAGTGAGTTG--------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 10:29 AM