ID:

dsi_9679

 Coordinate:

3l:5687101-5687250 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.7 -12.4 -12.1

Flybase annnotation

exon [3l_5686940_5687100_+]; CDS [3l_5686940_5687100_+]; intron [3l_5687101_5687647_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TCCTTTCTCTCGGCTGCCCTGTGCGCCTGGCAGATTTGGAGGTCCTACAAGTAGGGGTCGCAAAGGAGCCCCTGATATGGCCAGCTGCTGGATTAGGCCTGTCCCCTGCGGAGGCGTAATACCTAATAAGTTAAGTTTAGGCACATAGGCGAATGCATTTCTTTTAGATTTTCGAACGATTTTAACACAATGTATTGTCTTTCGTGAAACTTTTAAATGTTCCCATAACCAGTGTCCATGTCTAGTGTTC
*********************************************************************************************...((((((....(((..((((.((((.........)))).))))..))).))))))...************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 M023
head
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 M053
female body
 O001
Testis
........................................................................................................................................................................................ACACAATGTATTGTCTTTCGT............................................. 21 0 1 2.00 2 0 0 0 0 1 1 0 0 0 0 0
..............................................................................................................................TAAGTTAAGTTTAGGCACATAGGCGAA................................................................................................. 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
....TTCTCTCGGCTGCCTTGTGCGCCTGGCAGA........................................................................................................................................................................................................................ 30 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
................................................AAGTAGGGGTCGCAAA.......................................................................................................................................................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........GGCTGCCCTGTGCGCCTGGCAGATTTG.................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
........................................................................................................................................................................................................TTCGTGAAAGTTTTAAATGTTCCCA......................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................GCGCCTGGCAGATTTGGA.................................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................GATTTTAACACAATGTATTGTCTTTCGT............................................. 28 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................TAGGCCTGTCCCCTGCGGAGG........................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................................ATAACCAGTGTCCATGTCTA...... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................CTTTCGTGAAACTTTTAA.................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1
.....................TGCGCCTGGCAGATTTGGAG................................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................CTGGCAGATTTGGAGGTCCTA........................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TTTCGTGAAAGTTTTAAATGTT............................. 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................TTAGATTTTCGAACGATTTT................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................ACCAGTGTCCATGTC........ 15 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................TAGGCACATAGGCGAATGCATA........................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................CCAGTGTCCATGTCTAGTGTT. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................CTGCTGGATTAGGCCTGTCCC................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TTAGGCACATAGGCGAATGCA............................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TGTCTTTCGTGAAACTTT..................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................TTCCCATAACCAGTGTCCATGTCTAG..... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
....................GTGCGACTGGCAGATATGG................................................................................................................................................................................................................... 19 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
.................................................AGTAGGGGTCGCGAGAGAGC..................................................................................................................................................................................... 20 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
.................................GTTTGGAGGTCCTAGAAGGA..................................................................................................................................................................................................... 20 3 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................TCCTTTAGATTTTCG............................................................................ 15 1 20 0.15 3 0 3 0 0 0 0 0 0 0 0 0
.................................................AGTAGGGGTCGCGAGAGAG...................................................................................................................................................................................... 19 3 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................TATGTCCAGCTGCTGGAA............................................................................................................................................................. 18 2 15 0.07 1 0 0 0 0 0 0 0 1 0 0 0
.......................CGCCTGTCAGATGTGGAGC................................................................................................................................................................................................................ 19 3 17 0.06 1 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................GGCCCCTGCGGAGGCT...................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................TTAGGTTATCGAGCGATTT.................................................................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................ATGTATGGTCTTTGGTG............................................ 17 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
......................................................................................GTTGGATTATGCCTGTTCC................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

AGGAAAGAGAGCCGACGGGACACGCGGACCGTCTAAACCTCCAGGATGTTCATCCCCAGCGTTTCCTCGGGGACTATACCGGTCGACGACCTAATCCGGACAGGGGACGCCTCCGCATTATGGATTATTCAATTCAAATCCGTGTATCCGCTTACGTAAAGAAAATCTAAAAGCTTGCTAAAATTGTGTTACATAACAGAAAGCACTTTGAAAATTTACAAGGGTATTGGTCACAGGTACAGATCACAAG
*************************************************************************************************...((((((....(((..((((.((((.........)))).))))..))).))))))...********************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 M053
female body
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
...................................................................................................................................................................AATCTAAAAGCTTGC........................................................................ 15 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................ACAAGGGTATTGGTCACAGGTA........... 22 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................AATCCGTGTATCCGCTTACGT............................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0
...............................TCTAAACCTCCAGGATGTTCA...................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
.............................CGTCTAAACCTCCAGGATGTT........................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................................................................TCTAAAAGCTTGCTAAAATTG................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0
...............................TCTAAACCTCCAGGATGTTCAT..................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0
......................CGCGTACCGTCTAAACCTCCA............................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0
..............................................................TTCGACAGGGACTATACCGG........................................................................................................................................................................ 20 3 3 0.33 1 0 0 0 0 0 1 0
....................................ACCTCCAGGATGTCCCTC.................................................................................................................................................................................................... 18 2 6 0.17 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:5687051-5687300 + dsi_9679 TCCTTTCTCTCGGCTGCCCTGTGCGCCTGGCAGATTTGGAGGTCCTACAAGTAGGGGTC--------GCA---------------------------AAGGAGCC--CCTGATATGGCCAGCT-GCTGGATTAGGCCTGT--------------CCCCT-----------------------GCGGAGGCGTAATACC-------------T-AATAAGTTAAGTTTA--GGCACATAGGCGAATGCATTTCTT-TTAGATTTT------------------CGAACGATTTTAACAC------AATGTATTGTCT----TTC-------------------GTGA--------------------A-ACTTTT----AAATGTTCCCA--T-------------------------------AACCAGTGTC----------------------------CA--TGTCTAGTGTTC
droSec2 scaffold_2:5710981-5711230 + TCCTTTCTCTCGGCTGCCCTGTGCGCCTGGCAGATTTGGAGGTCCTACAAGTAGGGGTC--------GCA---------------------------AAGGAGCC--CCTGATATGGCCAGCT-GCTGGATTAGGCCTGT--------------CCCCT-----------------------GCGGAGGCGTAATACC-------------T-AAGAAGTTAAGTTTA--GGCACATAGGCGAATGCATTTCTT-TTAGATTTT------------------CGAATGATTTTAACAC------AATGTATTGTCT----TTC-------------------GTGA--------------------A-ACTTTT----AAATGTTCCCA--AA-------------------------------ACCAGTGTC----------------------------CA--TGTCTAGTGTTC
dm3 chr3L:5774048-5774302 + TCCTTGCTCTCGGCTGCCCTGTGCGCCTGGCAGATTTGGAGGTCCTACAAGTAAGGGAT--------TTG---------------------------CAGGAGCT---CTGAAATGTCCAGGT-GCTGGATTAGGCCTGT--------------CCCCT------------------GTCTCGCGGACGCGTAATACC-------------T-AATAAGTTAAGTTTA--GGCACATAGGCGAATGCATTTCTT-TTAGATTTT------------------CGAACGATTTTAACAC------AATGTATTGTCT----TTC-------------------GTGA--------------------A-ACTTTT----AAATGTTCCCA--TAA------------------------------ACCAGTGTC----------------------------CA--TGTCCAGTGTTC
droEre2 scaffold_4784:8464730-8464999 + TCCTTCCTCTCGGCTGCCCTGTGCGCCTGGCAGATTTGGCGGTCCTACAAGTAGGGGAT--------TCG---------------------------ATGGAGCT--CCTAATATGGCCAGCA-GCTGGATTAGGCCTGT--------------CCCCT-----------------------GCGGAGGCGTAATACC-------------T-AATAAGTTTAGTTTA--AGCAAATAGGCGAATGCATTTCTT-TTAGATTTT------------------CGAACGATTTTAACAC------AATGTACTGTCT----TTC-------------------GTGA--------------------A-AGTTTT----AAATGTTCCCA--AGTCCC--AG-GCGACGTCT---------CT-GACCAGTGT--------------------------GTCCA--TGTTTAGTGTTT
droYak3 3L:6343532-6343782 + TCCTTCCTCTCGGCTGCTTTGTGCGCCTGGCAGATTTGGAGGTCCTACAAGTAGGGAAT--------TCG---------------------------AAGGAGCC--GCTGATATGGCCAGCT-GCTGGATTTGGCCAGT--------------CCT----------------------------------------A-------------T-AATAAGTTTAAATTA--AGCACATAGGCGAATGCATTTCTT-TTAGATTTT------------------CGAACGATTTTAGCTC------CGTGTATTGTCT----TTC-------------------GTGA--------------------A-ACTTTT----AAATGTTCCCA--AGTCCC--AG-GCCACGTCT---------CT-GTCCAGTGGC----------------------------CA--TGTTTAGTGTTC
droEug1 scf7180000409466:3543862-3544127 + TCCTTCCTCTCTGCTGCATTGTGCGCCTGGCAAATTTGGAGGTCCTACAAGTAGAGGAT--------GAA---------------------------AATGAACC--CATAAAATGGGCAGCT-TCTGGATTGGGCCACT--------------CCCCT-----------------------GCGGAGGAGTAATACC-------------T-AATAAGTTTAGTTTA--GGCACCTAAGCGAATGCATTTCTT-TTAGATATT------------------CGAACGATTTTAACTT------AATGTCCTGTCC----TTC-------------------GTGA--------------------A-ATTTTG----AAATGTTTTCA--AGTCCC--AA-AC--CGTAT---------CT-GTCCAGTGCC----------------------------CA--GTTTTATTGTTT
droBia1 scf7180000302193:3277080-3277347 + TCCCTGCTCTCGGCCGCCCTGTGCACCTGGCAGATCTGGAGGTCCTTCAAGTAAAGGCT--------GTG-------------------------TGTAGGAACC--CTTGAAACGGGCAGCT-GCTGGATTGGGTCAAC--------------CCCGT-----------------------GCGGAA-AGTAATACC-------------C-GATAAGTTTAGTTTA--GGCACCTAAGCGAATGCATTTCGT-TTCGATTTT------------------CGAACGGTTTTAACTC------AATGTCTTGTCT----TTC-------------------GTCA--------------------A-CTTTTA----AAATGGTTCCA--AGTCCC--AG-GCCACGTCT---------CT-GTCCAGTGTC----------------------------CA--A-TTAAGTGTTT
droTak1 scf7180000415868:478684-478952 + TCCTTGCTCTCGGCTGCCCTGTGCACCTGGCAGATCTGGAGGTCCTTCAAGTAAAGGCTGTGTGTGTGCG---------------------------CAGGAACC--CTTGAAATGGCCAGCT-GCTGGATTGGGCCACT--------------CCC-------------------------------------AACC-------------T-AATAAGTTTAGTTTA--GGCACCTAAGCGAATGCATTTCTT-TTAGATTTT------------------CGAACGATTTTAACTC------ACTGTCTTGTCT----TTC-------------------GTGA--------------------A-GTTTTTTTAGAAATGGTTCCA--AGTCCCCCA--GCCAAGTCC---------TTCGTCCAGTGTC----------------------------CAATTGT-GTGTGTTT
droEle1 scf7180000491268:1271055-1271341 + TCCTTCCTCTCGGCTGCCCTGTGCGCCTGGCAGATCTGGAGGTCCTACAAGTAAAGAAT--------GCA---------------------------ACAGAACC--CCTAAAATGGGCAGCT-GCTGGATTGGGCCACT--------------TCCCT-----------------------GCGGAGGCGTTATACCCTATATATATAGCC-AATAAGTTTAGTCTA--GGCACCTAAGCGAATGCATTTCTT-TTAGATTTT------------------CGAACGATTTTAACTC------ACTGTCTTGTCT----TTC-------------------GTGA--------------------A-ATTTTA----AAA--------------------------GTCT---------CT-GTCCAGTGTCCAGTATCCAGTATCCAGTGTCCAGTGTCCT--TGT-CAGTGTTT
droRho1 scf7180000768851:62745-63016 + TCCTTCCTCTCGGCTGCCCTGTGCGCCTGGCAAATCTGGAGGTCCTACAAATAAAGGAT--------GCA---------------------------ACGGAACC--CCTAAAATGGGCAGCT-GCTGGATTGGGCCACT--------------TCCCT-----------------------GCGGAGGCGTTATACC-------------T-TATAAGTTTAGTCTA--GGCACCTAAGCGAATGCATTTCTT-TTAGATTTT------------------CGAACGATTTTAACTT------ACTGTCTTGTCT----TTC-------------------GTGA--------------------A-ATTTTA----AAATGGTTGCA--AGTCTC--AG--CCAAGTCT---------CT-GTCCAGTGTC---------------------CTGTGTCCA--TAT-CAGTGTT-
droFic1 scf7180000453929:1841985-1842256 - TCCTTCCTCTCGGCCGCCCTTTGCGCATGGCAAATCTGGAGGTCCTACAAGTAGGACTT--------GCG-------------------------AAAAGGAATC--CCTGAAATGGGCAGCT-GCTGGATAGGGAAAGT--------------CCAAT-----------------------GCGGAGACGTAATACC-------------C-AATAAGTTTAGTCTA--GGCACCTAAGCGAATGCATTTCTT-TTAGATTTT------------------CGAACGATTTTAACTA------ACTGTCTTGTCT----TTC-------------------GTGA--------------------A-AATTTT---AAAATGGTTCCA--AGTCCC--AG-GCCTCGTTT---------CT-GTCCAGTGTC---------------------CAG--------TGTTTAGTGTCC
droKik1 scf7180000302686:71749-72044 + ACCTTCCTTTCGGCAGCCCTATGCGCCTGGCAAATCTGGCGGTCATACAAGTAGGAGGCCT------G-GCAGTCCAATATCCAAGCAATTCATGCAATCCAAAA--CCCGAGAATGGCAGCT-GCAGCCGAAGAGGAAG--------------CGAAA-----------------------GCGGAAGCGTCATACG-------------T-AATAAGTTTAGATTATAGGCA-CTAAGCGAATGCATTTCTA-TAAGAATTTCGATTTTCAAACGATTTTCGAACGATTTTAGCTT------ACT--TCTGTC------TT-------------------GTGA--------------------A-GTTTTT---TAAATGGTTACG--AGTCCC--AG-CTTCCGTC-------------GT-------------------------------------------CCCGCGTCC
droAna3 scaffold_13337:12766604-12766867 - ACCTTCCTTTCGGCTGCGTTGTGCGCCTGGCAGATCTGGCGATCCTACAAGTAGATAAT--------GAA---------------------------AACCTATCTTCCCCAGTTTGGAAGCT-AATGGAATGGGCCACG--------------CTTCC-----------------------ACGGAGGCGTAATACG-------------T-AATAAGTCTAGACTA--GGCGTCTGAGCGAATGCATTTTCTTTTAGG-TAT------------------CGAACGATTTTAGCTTGCGATCGTTGTGTCATTC----TTT-------------------GTAA--------------------T-GTTTTT----AAATAGTTCCATGAGTCCC--AA-A-AAGGTCT---------TT-GT-------------------------------------------ATCGTGTCC
droBip1 scf7180000396589:1256143-1256396 + ACCTTCCTCTCGGCTGCGTTGTGCGCCTGGCAAATCTGGAGATCCTACAAGTAGATAAT--------GCA---------------------------CACCAATCTTCCCCAGTTTGGAAGCT-AATGGAATGGGCCACG--------------CTTCC-----------------------ACGGAGGCGTAATACG-------------T-AATAAGTCTAGACTA--GTCGTCTGAGCGAATGCATTTTCTTTTAGG-TAT------------------CGAGCGATTTAAGCTTGCAATCGTTGTGTCATTC----TTT-------------------GTAA--------------------T-GTTTTT----AAATGGTTCCA--AATC------------GTCT---------TT-GT-------------------------------------------ATCGTGTCC
dp5 XR_group6:9777174-9777451 - GCCTTCCTGTCGGCTGCGCTGTGCGCTTGGCAAATCTGGCGGTCATATAAGTAGACAGCGAG-----GT-------------------------------------------A-------------------AGGGCCG---CCAGCAGAGAGACAACAGC--------ATGAGAATT----------ACACAATATT-------------T-AATAAGTTTACTTTA--GTGACCTAAGCAAATGCATTTTAT-TTAGATATC------------------CCAACGTTTC--------------------GTTCGTAC-TAGTAACCAGTCTTGTGTCTTGTGCCTTGTGTTGCCAGGCACATCACA-TTT----TATGTGATTGAA--AGTGTA--AAT-TGTCGT--------------ATGTAGTGTA----------------------------AA--AGTCT-CAGTTG
droPer2 scaffold_61:52208-52485 - GCCTTCCTGTCGGCTGCGCTGTGCGCTTGGCAAATCTGGCGGTCATATAAGTAGACAGCGAG-----GT-------------------------------------------A-------------------AGGGCCG---CCAGCAGAGAGACAACAGC--------ATGAGAATT----------ACACAATATT-------------T-AATAAGTTTACTTTA--GTGACCTAAGCAAATGCATTTTAT-TTAGATATC------------------CCAACGTTTC--------------------GTTCGTAC-TAGTAACCAGTCTTTTGTCTTGTGCCTTGTGTTGCCAGGCACATCACA-TTT----TATGTGATTGAA--AGTGTA--AAT-TGTCGT--------------ATGTAGTGTA----------------------------AA--AGTCT-CAGTTG
droWil2 scf2_1100000004511:3742661-3742727 - ACCTTTCTATCGGCTGCACTTTGCGCCTGGCAAATTTGGCGTTCCTACAAGTAGTAGGA--------GCT---------------------------AACGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:8324364-8324637 + ACATTCTTATCGGCAGCGCTGTGTGCCTGGCAGATTTGGCGATCCTACAAGTAGACGAC--------GAC---TC-G------------------ATCTGGAATC--AGATAATCGGCCAGCTAGCTAGCCAATGGCTGCAGTCTGCGGCAATACG---GCGCGTTATCTTGAACTTGAC----------T--------CAAGTATTTGGTT-AATAAGTTTAGTTAAA-CGCCATTGCGCGTATGCATTTCTT-TTAGAATTT------------------CGAACGTTT--------------------CGTTTTTCC-TA-------------------GTTA--------------------A-ATTTTA----AAGTGGTTCAA--AGTCCG--AAA-T---GTCT---------AT-----------------------------------------------GAATGTTT
droMoj3 scaffold_6680:11978718-11979001 + ACCTTCTTATCGGCGGCTTTGTGTGCTTGGCAGATATGGCGGTCATATAAGTAAACGAT--------AAGCACTCTG------------------AT-TGGGAT--------A--AGTCAGCC-ATT-GCCAAT----GCAGGCGGCAACGAAGCG---GCGCGTAATCTTGAACTTGGC----------C-------CCAAGTATTTGGTTTTATAAGTT-AGT-TG--AACGCTGTGGCGTATGCATTTCTT-TTAGAATTT------------------CGAT-ATT------------------TTTCGTTTTTCC-TA-------------------GTTA--------------------A-ATTTTT---AAAGTGGTTCAG--AGTCCG--AAA-TGTCAACATGAATGTTTCT-CTATAGT--------------------------------------TGTGCATAT
droGri2 scaffold_15110:7353169-7353410 + ACCTTTCTATCGGCTGCGTTGTGCGCCTGGCAGATCTGGCGATCCTATAAGTAGACGACGAT-----GTA---------------------------ACAG-----------------------------------------TCAACAGTAATACG---GCGAGTTATCTTGAACTTGAC----------T--------CAAGGGTTCGGTA-TATAAGTTTAGTT-A--AACGCCACTGCGTATGCATTTCTT-TTAGAATTT------------------CGAT-GTTTTTTTTTT-------------CGTTTTTCCTTA-------------------GTTA--------------------A-ATTTTT---AAAGTGGTTCTAAAAGTCCA--AAT-TGTCGT---------------------------------------------------------AT-GAGTGTTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCCTTTCTCTCGGCTGCCCTGTGCGCCTGGCAGATTTGGAGGTCCTACAAGTAGGGGTC--------GCA---------------------------AAGGAGCC--CCTGATATGGCCAGCT-GCTGGATTAGGCCTGT--------------CCCCT-----------------------GCGGAGGCGTAATACC-------------T-AATAAGTTAAGTTTA--GGCACATAGGCGAATGCATTTCTT-TTAGATTTT------------------CGAACGATTTTAACAC------AATGTATTGTCT----TTC-------------------GTGA--------------------A-ACTTTT----AAATGTTCCCA--T-------------------------------AACCAGTGTC----------------------------CA--TGTCTAGTGTTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................ACAC------AATGTATTGTCT----TTC-------------------GT.....................................................................................................................................2112.00211000000000000000
.......................................................................................................................................................................................................................TAAGTTAAGTTTA--GGCACATAGGCGAA.........................................................................................................................................................................................................................................2712.00200000020000000000
................................................AAGTAGGGGTC--------GCA---------------------------AA..........................................................................................................................................................................................................................................................................................................................................................................................1611.00100000010000000000
...........GGCTGCCCTGTGCGCCTGGCAGATTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
......................GCGCCTGGCAGATTTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000001000000000
...............................................................................................................................................................................................................................................................................................GATTTTAACAC------AATGTATTGTCT----TTC-------------------GT.....................................................................................................................................2811.00100100000000000000
...................................................................................................................................TAGGCCTGT--------------CCCCT-----------------------GCGGAGG................................................................................................................................................................................................................................................................................................2111.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................A--T-------------------------------AACCAGTGTC----------------------------CA--TGTCTA......2011.00100000001000000000
..........................................................................................................................................................................................................................................................................................................................CT----TTC-------------------GTGA--------------------A-ACTTTT----AA.................................................................................................1811.00100001000000000000
.....................TGCGCCTGGCAGATTTGGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000001000000000
..........................CTGGCAGATTTGGAGGTCCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
...............................................................................................................................................................................................................................................................TTAGATTTT------------------CGAACGATTTT........................................................................................................................................................................................2011.00100000000100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGTGTC----------------------------CA--TGTC........1511.00100000000001000000
..................................................................................................................................................................................................................................TA--GGCACATAGGCGAATGCATA...................................................................................................................................................................................................................................2211.00100000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTGTC----------------------------CA--TGTCTAGTGTT.2111.00100000010000000000
.........................................................................................................................CT-GCTGGATTAGGCCTGT--------------CCC................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
.................................................................................................................................................................................................................................TTA--GGCACATAGGCGAATGCA.....................................................................................................................................................................................................................................2111.00100000000000001000
.......................................................................................................................................................................................................................................................................................................................TGTCT----TTC-------------------GTGA--------------------A-ACTTT........................................................................................................1811.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TTCCCA--T-------------------------------AACCAGTGTC----------------------------CA--TGTCTAG.....2611.00100000000100000000
droSec2
TCCTTTCTCTCGGCTGCCCTGTGCGCCTGGCAGATTTGGAGGTCCTACAAGTAGGGGTC--------GCA---------------------------AAGGAGCC--CCTGATATGGCCAGCT-GCTGGATTAGGCCTGT--------------CCCCT-----------------------GCGGAGGCGTAATACC-------------T-AAGAAGTTAAGTTTA--GGCACATAGGCGAATGCATTTCTT-TTAGATTTT------------------CGAATGATTTTAACAC------AATGTATTGTCT----TTC-------------------GTGA--------------------A-ACTTTT----AAATGTTCCCA--AA-------------------------------ACCAGTGTC----------------------------CA--TGTCTAGTGTTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................TTA--GGCACATAGGCGAATGC......................................................................................................................................................................................................................................2012.0020110
.........................................................................................................................CT-GCTGGATTAGGCCTGT--------------...................................................................................................................................................................................................................................................................................................................................1811.0011000
..........................................................................................................................................................................................................................GTTAAGTTTA--GGCACATAGGCGA..........................................................................................................................................................................................................................................2311.0011000
.........................................................................................................................................................................................................................AGTTAAGTTTA--GGCACATAGGCGA..........................................................................................................................................................................................................................................2411.0010100
dm3
TCCTTGCTCTCGGCTGCCCTGTGCGCCTGGCAGATTTGGAGGTCCTACAAGTAAGGGAT--------TTG---------------------------CAGGAGCT---CTGAAATGTCCAGGT-GCTGGATTAGGCCTGT--------------CCCCT------------------GTCTCGCGGACGCGTAATACC-------------T-AATAAGTTAAGTTTA--GGCACATAGGCGAATGCATTTCTT-TTAGATTTT------------------CGAACGATTTTAACAC------AATGTATTGTCT----TTC-------------------GTGA--------------------A-ACTTTT----AAATGTTCCCA--TAA------------------------------ACCAGTGTC----------------------------CA--TGTCCAGTGTTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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........................................................................................................................................................................................................................................................................................................................................................................................................AA------------------------------ACCAGTGTC----------------------------CA--TGTCCAGTGTTC2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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TCCTTGCTCTCGGCTGCCCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................................................................TG---------------------------CAGGAGCT---CTGAAATGTCCAGGT-GC...............................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................C------AATGTATTGTCT----TTC-------------------GTGA--------------------A-ACTTT........................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
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.......................CGCCTGGCAGATTTGGAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................TGGAGGTCCTACAAGTAAGGGAT--------TT........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
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..........................................................................................................................T-GCTGGATTAGGCCTGT--------------CCCC...............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................TAAGTTTA--GGCACATAGGC............................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
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...............................................................................................................................................................................................................................................................................................................................................................................................TTCCCA--TAA------------------------------ACCAGTGTC----------------------------CA--TGTCC.......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.................................................AGTAAGGGAT--------TTG---------------------------CAGGAGCT---.................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TGTTCCCA--TAA------------------------------ACCAGTGTC----------------------------C...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
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..............................................................................................................................................................................................................................................................................................................................................................................................GTTCCCA--TAA------------------------------ACCAGTGTC----------------------------CA--............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
.....................................................................G---------------------------CAGGAGCT---CTGAAATGTCCAGGT-G................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TACAAGTAAGGGAT--------TTG---------------------------CAGG........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
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..................................................................................................................................................................................................................................................................................................TTTAACAC------AATGTATTGTCT----TTC-------------------GTGA--------------------A-AC...........................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...............................AGATTTGGAGGTCCTACAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................T----TTC-------------------GTGA--------------------A-ACTTTT----AAATGT.............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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................................................................................................................................................................................................................................................................................................ATTTTAACAC------AATGTATTGTCT----TTC-------------------GT.....................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...........................TGGCAGATTTGGAGGTCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................TCTT-TTAGATTTT------------------CGAACGATTT.........................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..................................................................................................................................................................................................................................................................................................................................................................................TTTT----AAATGTTCCCA--TAA------------------------------ACC..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CGCCTGGCAGATTTGGAGGTCCTACC............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................AC------AATGTATTGTCT----TTC-------------------GTGA--------------------...............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..........................................................................................................................................................................................................................................................................................................................................................................................AAATGTTCCCA--TAA------------------------------ACCAGTGC.............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
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.....................................................................................................................................................................................................................................................................................................AACAC------AATGTATTGTCT----TTC-------------------GT.....................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................CGCGTAATACC-------------T-AATAAGT.................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TCCCA--TAA------------------------------ACCAGTGTC----------------------------CA--TGTCCAG.....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
TCCTTGCTCTCGGCTGCCCTGTGCGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CA--TAA------------------------------ACCAGTGTC----------------------------CA--TGTCC.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................TCCTACAAGTAAGGGAT--------TTG---------------------------CA..........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGTGCGCCTGGCAGATTTGGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................T----AAATGTTCCCA--TAA------------------------------ACCAGT...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................TAAGGGAT--------TTG---------------------------CAGGAGCT---CTGAA............................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------ACCAGTGTC----------------------------CA--TGTCCAGTG...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................GTTAAGTTTA--GGCACATAGGC............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................................CTACAAGTAAGGGAT--------TTG---------------------------CAGGAGCT---.................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................CCTACAAGTAAGGGAT--------TTG---------------------------CA..........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................TCTCGCGGACGCGTAATACC-------------T-AATAAGT.................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................CCCT------------------GTCTCGCGGACGCGTAA...........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................AGCT---CTGAAATGTCCAGGT-GCT..............................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TACAAGTAAGGGAT--------TTG---------------------------CAGGAGCT---CT...............................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GGCAGATTTGGAGGTCCTACA............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................GGGAT--------TTG---------------------------CAGGAGCT---CTGAAA...........................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................CTACAAGTAAGGGAT--------TTG---------------------------CAGGAG......................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TCCTTGCTCTCGGCTGCCCTGTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TTAACAC------AATGTATTGTCT----TT...........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................AATACC-------------T-AATAAGTTAAGTTTA--GGC....................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAAGGGAT--------TTG---------------------------CAGGAGCT---.................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AGGGAT--------TTG---------------------------CAGGAGCT---CT...............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................TCCAGGT-GCTGGATTAGGCCT...................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
..................................................GTAAGGGAT--------TTG---------------------------CAGGAG......................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................TTG---------------------------CAGGAGCT---CTGAAATGTCCAGG...................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GAT--------TTG---------------------------CAGGAGCT---CTGAAAT..........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGTGTC----------------------------CA--TGTCCAGTGTT.2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TATTGTCT----TTC-------------------GTGA--------------------A-ACTTT........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................GTTTA--GGCACATAGGCGAA.........................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................................................TAAGGGAT--------TTG---------------------------CAGGAGCT---C................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................CTT-TTAGATTTT------------------CGAACGATTTTAAC.....................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................ACAC------AATGTATTGTCT----TTC-------------------GT.....................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................AGTTTA--GGCACATAGGCGAATGC......................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................T--------TTG---------------------------CAGGAGCT---CTGAAATGTCCAGA...................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TGCCCTGTGCGCCTGGCAGATTTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................CCTGT--------------CCCCT------------------GTCTCGCGGAC.................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GTGCGCCTGGCAGATTTGGAGGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................T--------------CCCCT------------------GTCTCGCGGACGCGTAATACC-------------..........................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TAAGGGAT--------TTG---------------------------CAGGAGCT---CT...............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................AGGAGCT---CTGAAATGTCCAGGT-G................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................GGAT--------TTG---------------------------CAGGAGCT---CTGAA............................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
droEre2
TCCTTCCTCTCGGCTGCCCTGTGCGCCTGGCAGATTTGGCGGTCCTACAAGTAGGGGAT--------TCG---------------------------ATGGAGCT--CCTAATATGGCCAGCA-GCTGGATTAGGCCTGT--------------CCCCT-----------------------GCGGAGGCGTAATACC-------------T-AATAAGTTTAGTTTA--AGCAAATAGGCGAATGCATTTCTT-TTAGATTTT------------------CGAACGATTTTAACAC------AATGTACTGTCT----TTC-------------------GTGA--------------------A-AGTTTT----AAATGTTCCCA--AGTCCC--AG-GCGACGTCT---------CT-GACCAGTGT--------------------------GTCCA--TGTTTAGTGTTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................TACAAGTAGGGGAT--------TCG---------------------------ATGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................2412.0021100000
....................................................AGGGGAT--------TCG---------------------------ATGGAGCT--CCTAATATG.........................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
................................GATTTGGCGGTCCTACAAGTAGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................TCT---------CT-GACCAGTGT--------------------------GTCCA--TGTTTAG.....2611.0011000000
..........................................................................................................................A-GCTGGATTAGGCCTGT--------------CC.................................................................................................................................................................................................................................................................................................................................1911.0010000100
............................................................................................................................................................................................................................TTAGTTTA--AGCAAATAGGCGAATGC......................................................................................................................................................................................................................................2511.0010000100
.............................................TACAAGTAGGGGAT--------TCG---------------------------ATGGAG......................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
droYak3
TCCTTCCTCTCGGCTGCTTTGTGCGCCTGGCAGATTTGGAGGTCCTACAAGTAGGGAAT--------TCG---------------------------AAGGAGCC--GCTGATATGGCCAGCT-GCTGGATTTGGCCAGT--------------CCT----------------------------------------A-------------T-AATAAGTTTAAATTA--AGCACATAGGCGAATGCATTTCTT-TTAGATTTT------------------CGAACGATTTTAGCTC------CGTGTATTGTCT----TTC-------------------GTGA--------------------A-ACTTTT----AAATGTTCCCA--AGTCCC--AG-GCCACGTCT---------CT-GTCCAGTGGC----------------------------CA--TGTTTAGTGTTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................GTATTGTCT----TTC-------------------GTGA--------------------A-ACTTTT----A..................................................................................................2411.00100000010000
...........................................................................................................................................................................................................................................................CTT-TTAGATTTT------------------CGAACGA............................................................................................................................................................................................1911.00101000000000
......................................................................................................................CAGCT-GCTGGATTTGGCC....................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
................................GATTTGGAGGTCCTACAAGTAGGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.........................................................AT--------TCG---------------------------AAGGAGCC--GCTGATATGGCC......................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
............................................................................................................................................................................................................................................................................................AACGATTTTAGCTC------CGTGTATTGTCT----TT...........................................................................................................................................................2811.00100000010000
.................................................................................................................................................................................................................................................................................................TTTTAGCTC------CGTGTATTGTCT----TTC-------------------GT.....................................................................................................................................2611.00100000010000
...............................AGATTTGGAGGTCCTACAAGTAGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
droEug1
TCCTTCCTCTCTGCTGCATTGTGCGCCTGGCAAATTTGGAGGTCCTACAAGTAGAGGAT--------GAA---------------------------AATGAACC--CATAAAATGGGCAGCT-TCTGGATTGGGCCACT--------------CCCCT-----------------------GCGGAGGAGTAATACC-------------T-AATAAGTTTAGTTTA--GGCACCTAAGCGAATGCATTTCTT-TTAGATATT------------------CGAACGATTTTAACTT------AATGTCCTGTCC----TTC-------------------GTGA--------------------A-ATTTTG----AAATGTTTTCA--AGTCCC--AA-AC--CGTAT---------CT-GTCCAGTGCC----------------------------CA--GTTTTATTGTTTSizeHit CountTotal NormTotal
No Reads
droBia1
TCCCTGCTCTCGGCCGCCCTGTGCACCTGGCAGATCTGGAGGTCCTTCAAGTAAAGGCT--------GTG-------------------------TGTAGGAACC--CTTGAAACGGGCAGCT-GCTGGATTGGGTCAAC--------------CCCGT-----------------------GCGGAA-AGTAATACC-------------C-GATAAGTTTAGTTTA--GGCACCTAAGCGAATGCATTTCGT-TTCGATTTT------------------CGAACGGTTTTAACTC------AATGTCTTGTCT----TTC-------------------GTCA--------------------A-CTTTTA----AAATGGTTCCA--AGTCCC--AG-GCCACGTCT---------CT-GTCCAGTGTC----------------------------CA--A-TTAAGTGTTTSizeHit CountTotal NormTotal
No Reads
droTak1
TCCTTGCTCTCGGCTGCCCTGTGCACCTGGCAGATCTGGAGGTCCTTCAAGTAAAGGCTGTGTGTGTGCG---------------------------CAGGAACC--CTTGAAATGGCCAGCT-GCTGGATTGGGCCACT--------------CCC-------------------------------------AACC-------------T-AATAAGTTTAGTTTA--GGCACCTAAGCGAATGCATTTCTT-TTAGATTTT------------------CGAACGATTTTAACTC------ACTGTCTTGTCT----TTC-------------------GTGA--------------------A-GTTTTTTTAGAAATGGTTCCA--AGTCCCCCA--GCCAAGTCC---------TTCGTCCAGTGTC----------------------------CAATTGT-GTGTGTTTSizeHit CountTotal NormTotal
No Reads
droEle1
TCCTTCCTCTCGGCTGCCCTGTGCGCCTGGCAGATCTGGAGGTCCTACAAGTAAAGAAT--------GCA---------------------------ACAGAACC--CCTAAAATGGGCAGCT-GCTGGATTGGGCCACT--------------TCCCT-----------------------GCGGAGGCGTTATACCCTATATATATAGCC-AATAAGTTTAGTCTA--GGCACCTAAGCGAATGCATTTCTT-TTAGATTTT------------------CGAACGATTTTAACTC------ACTGTCTTGTCT----TTC-------------------GTGA--------------------A-ATTTTA----AAA--------------------------GTCT---------CT-GTCCAGTGTCCAGTATCCAGTATCCAGTGTCCAGTGTCCT--TGT-CAGTGTTTSizeHit CountTotal NormTotal
No Reads
droRho1
TCCTTCCTCTCGGCTGCCCTGTGCGCCTGGCAAATCTGGAGGTCCTACAAATAAAGGAT--------GCA---------------------------ACGGAACC--CCTAAAATGGGCAGCT-GCTGGATTGGGCCACT--------------TCCCT-----------------------GCGGAGGCGTTATACC-------------T-TATAAGTTTAGTCTA--GGCACCTAAGCGAATGCATTTCTT-TTAGATTTT------------------CGAACGATTTTAACTT------ACTGTCTTGTCT----TTC-------------------GTGA--------------------A-ATTTTA----AAATGGTTGCA--AGTCTC--AG--CCAAGTCT---------CT-GTCCAGTGTC---------------------CTGTGTCCA--TAT-CAGTGTT-SizeHit CountTotal NormTotal
No Reads
droFic1
TCCTTCCTCTCGGCCGCCCTTTGCGCATGGCAAATCTGGAGGTCCTACAAGTAGGACTT--------GCG-------------------------AAAAGGAATC--CCTGAAATGGGCAGCT-GCTGGATAGGGAAAGT--------------CCAAT-----------------------GCGGAGACGTAATACC-------------C-AATAAGTTTAGTCTA--GGCACCTAAGCGAATGCATTTCTT-TTAGATTTT------------------CGAACGATTTTAACTA------ACTGTCTTGTCT----TTC-------------------GTGA--------------------A-AATTTT---AAAATGGTTCCA--AGTCCC--AG-GCCTCGTTT---------CT-GTCCAGTGTC---------------------CAG--------TGTTTAGTGTCCSizeHit CountTotal NormTotal
No Reads
droKik1
ACCTTCCTTTCGGCAGCCCTATGCGCCTGGCAAATCTGGCGGTCATACAAGTAGGAGGCCT------G-GCAGTCCAATATCCAAGCAATTCATGCAATCCAAAA--CCCGAGAATGGCAGCT-GCAGCCGAAGAGGAAG--------------CGAAA-----------------------GCGGAAGCGTCATACG-------------T-AATAAGTTTAGATTATAGGCA-CTAAGCGAATGCATTTCTA-TAAGAATTTCGATTTTCAAACGATTTTCGAACGATTTTAGCTT------ACT--TCTGTC------TT-------------------GTGA--------------------A-GTTTTT---TAAATGGTTACG--AGTCCC--AG-CTTCCGTC-------------GT-------------------------------------------CCCGCGTCCSizeHit CountTotal NormTotal
No Reads
droAna3
ACCTTCCTTTCGGCTGCGTTGTGCGCCTGGCAGATCTGGCGATCCTACAAGTAGATAAT--------GAA---------------------------AACCTATCTTCCCCAGTTTGGAAGCT-AATGGAATGGGCCACG--------------CTTCC-----------------------ACGGAGGCGTAATACG-------------T-AATAAGTCTAGACTA--GGCGTCTGAGCGAATGCATTTTCTTTTAGG-TAT------------------CGAACGATTTTAGCTTGCGATCGTTGTGTCATTC----TTT-------------------GTAA--------------------T-GTTTTT----AAATAGTTCCATGAGTCCC--AA-A-AAGGTCT---------TT-GT-------------------------------------------ATCGTGTCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................TGGAAGCT-AATGGAATGGGCCA...................................................................................................................................................................................................................................................................................................................................................2211.001100000
.............................................................................................................................................................................................................................................................TTTTAGG-TAT------------------CGAACGATTTTAGCT....................................................................................................................................................................................2511.001000001
..................................TCTGGCGATCCTACAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...TTCCTTTCGGCTGCGTTGTGCGCCTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...................................................................................................................TGGAAGCT-AATGGAATGG.......................................................................................................................................................................................................................................................................................................................................................1811.001000010
.............................................................................................................................................................................................................................................................................................ACGATTTTAGCTTGCGATCGTTGTGTC.....................................................................................................................................................................2711.001010000
...............................................................................................................................................................................................................................GACTA--GGCGTCTGAGCGAATGC......................................................................................................................................................................................................................................2211.001010000
......................................................................................................................................................................................................................ATAAGTCTAGACTA--GGCGTCTGAGC............................................................................................................................................................................................................................................2511.001010000
.................................................................................................................................................................................................................................................................................................TTTTAGCTTGCGATCGTTGTGTC.....................................................................................................................................................................2311.001010000
.......................................................................................................................AGCT-AATGGAATGGGCCA...................................................................................................................................................................................................................................................................................................................................................1811.001100000
.............................................................................................................................ATGGAATGGGCCACG--------------CTTCC-----------------------ACGGAGGC...............................................................................................................................................................................................................................................................................................2811.001010000
droBip1
ACCTTCCTCTCGGCTGCGTTGTGCGCCTGGCAAATCTGGAGATCCTACAAGTAGATAAT--------GCA---------------------------CACCAATCTTCCCCAGTTTGGAAGCT-AATGGAATGGGCCACG--------------CTTCC-----------------------ACGGAGGCGTAATACG-------------T-AATAAGTCTAGACTA--GTCGTCTGAGCGAATGCATTTTCTTTTAGG-TAT------------------CGAGCGATTTAAGCTTGCAATCGTTGTGTCATTC----TTT-------------------GTAA--------------------T-GTTTTT----AAATGGTTCCA--AATC------------GTCT---------TT-GT-------------------------------------------ATCGTGTCCSizeHit CountTotal NormTotal
No Reads
dp5
GCCTTCCTGTCGGCTGCGCTGTGCGCTTGGCAAATCTGGCGGTCATATAAGTAGACAGCGAG-----GT-------------------------------------------A-------------------AGGGCCG---CCAGCAGAGAGACAACAGC--------ATGAGAATT----------ACACAATATT-------------T-AATAAGTTTACTTTA--GTGACCTAAGCAAATGCATTTTAT-TTAGATATC------------------CCAACGTTTC--------------------GTTCGTAC-TAGTAACCAGTCTTGTGTCTTGTGCCTTGTGTTGCCAGGCACATCACA-TTT----TATGTGATTGAA--AGTGTA--AAT-TGTCGT--------------ATGTAGTGTA----------------------------AA--AGTCT-CAGTTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................ATC------------------CCAACGTTTC--------------------GTTCGTAC-T...........................................................................................................................................................2211.0010100000000
.........................................................GCGAG-----GT-------------------------------------------A-------------------AGGGCCG---CCAGCAGAGA.....................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................GAA--AGTGTA--AAT-TGTCGT--------------ATGTAGTGT.............................................2711.0010010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GTA--AAT-TGTCGT--------------ATGTAGT...............................................1911.0010000001000
.............................................................................................................................................................................................................................TACTTTA--GTGACCTAAGCAAATGCATTT..................................................................................................................................................................................................................................2811.0010100000000
........................................GGTCATATAAGTAGACAGCGAG-----..........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...............................................................................................................................................................................................................................................................................................GTTTC--------------------GTTCGTAC-TAGTAACC....................................................................................................................................................2111.0010010000000
...........................................................................................................................................................................................................................................................................................................................................................TTGTGTTGCCAGGCACATC...............................................................................................................1911.0010100000000
.............................................................................................................................................................................................................................................................T-TTAGATATC------------------CCAACGTTTC--------------------GTTCGTAC-............................................................................................................................................................2811.0010100000000
...............................................................................................................................................................................................................................CTTTA--GTGACCTAAGCAAATGC......................................................................................................................................................................................................................................2211.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................TATGTGATTGAA--AGTGTA--AAT-T.........................................................................2211.0010100000000
........................................................AGCGAG-----GT-------------------------------------------A-------------------AGGGCCG---CC.............................................................................................................................................................................................................................................................................................................................................1811.0010010000000
....................................................................................................................................................................................................TT-------------T-AATAAGTTTACTTTA--G......................................................................................................................................................................................................................................................1911.0010000100000
..................................................................................................................................................................................................................................................................................................................................................................................................GAA--AGTGTA--AAT-TGTCGT--------------ATGTAGTGTA----------------------------................2811.0010000001000
.............................................................................................................................................................................................................................................................................................................................................................................................TGATTGAA--AGTGTA--AA............................................................................1620.5010000000010
droPer2
GCCTTCCTGTCGGCTGCGCTGTGCGCTTGGCAAATCTGGCGGTCATATAAGTAGACAGCGAG-----GT-------------------------------------------A-------------------AGGGCCG---CCAGCAGAGAGACAACAGC--------ATGAGAATT----------ACACAATATT-------------T-AATAAGTTTACTTTA--GTGACCTAAGCAAATGCATTTTAT-TTAGATATC------------------CCAACGTTTC--------------------GTTCGTAC-TAGTAACCAGTCTTTTGTCTTGTGCCTTGTGTTGCCAGGCACATCACA-TTT----TATGTGATTGAA--AGTGTA--AAT-TGTCGT--------------ATGTAGTGTA----------------------------AA--AGTCT-CAGTTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................AAT-TGTCGT--------------ATGTAGTGTA----------------------------................1911.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................GTA--AAT-TGTCGT--------------ATGTAGTGT.............................................2111.001100000
...................................................................................................................................................................................................................................................................ATATC------------------CCAACGTTTC--------------------GTTCGTAC-T...........................................................................................................................................................2411.001100000
.....................................................................................................................................................................................................................................................................ATC------------------CCAACGTTTC--------------------GTTCGTAC-T...........................................................................................................................................................2211.001100000
..................................TCTGGCGGTCATATAAGTAGACAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
....................................................AGACAGCGAG-----GT-------------------------------------------A-------------------AGGGCCG---CC.............................................................................................................................................................................................................................................................................................................................................2211.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................GTA--AAT-TGTCGT--------------ATGTAGTGC.............................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................ATTGAA--AGTGTA--AAT-TGTCGT--------------ATGTAGT...............................................2811.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................GTGTA--AAT-TGTCGT--------------ATGTAGT...............................................2111.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................GTA--AAT-TGTCGT--------------ATGTAGTGG.............................................2111.001100000
..............................................................................................................................................................................................................................................................................................CGTTTC--------------------GTTCGTAC-TAGTAAC.....................................................................................................................................................2111.001100000
..............................................................................................................................................................................................................................................................................................CGTTTC--------------------GTTCGTAC-TAGTAACC....................................................................................................................................................2211.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................AAT-TGTCGT--------------ATGTAGTGTA----------------------------AA--AGTCT-......2611.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................GTA--AAT-TGTCGT--------------ATGTAGT...............................................1911.001001000
droWil2
ACCTTTCTATCGGCTGCACTTTGCGCCTGGCAAATTTGGCGTTCCTACAAGTAGTAGGA--------GCT---------------------------AACGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................GGCGTTCCTACAAGTAGTAG....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
........ATCGGCTGCACTTTGCGCCTGGCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
..................................TTTGGCGTTCCTACAAGTAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
droVir3
ACATTCTTATCGGCAGCGCTGTGTGCCTGGCAGATTTGGCGATCCTACAAGTAGACGAC--------GAC---TC-G------------------ATCTGGAATC--AGATAATCGGCCAGCTAGCTAGCCAATGGCTGCAGTCTGCGGCAATACG---GCGCGTTATCTTGAACTTGAC----------T--------CAAGTATTTGGTT-AATAAGTTTAGTTAAA-CGCCATTGCGCGTATGCATTTCTT-TTAGAATTT------------------CGAACGTTT--------------------CGTTTTTCC-TA-------------------GTTA--------------------A-ATTTTA----AAGTGGTTCAA--AGTCCG--AAA-T---GTCT---------AT-----------------------------------------------GAATGTTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................TTA----AAGTGGTTCAA--AGTCCG--A.............................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................GAACGTTT--------------------CGTTTTTCC-TA-------------------GTT....................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................CAATACG---GCGCGTTATCTTG.................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
......................................................................................................ATC--AGATAATCGGCCAGCTAGCTAGC...........................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TA----AAGTGGTTCAA--AGTCCG--AAA-T---GTC...................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................AGTATTTGGTT-AATAAGTTTAGTT...........................................................................................................................................................................................................................................................2411.001000000000000000000010000000000000000000000000000000000000000000
...........GGCAGCGCTGTGTGCCTGGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................CTT-TTAGAATTT------------------CGAACGTTT--------------------CGTTTT................................................................................................................................................................2711.001010000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TTAGAATTT------------------CGAACGTTT--------------------CGTT..................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................CTT-TTAGAATTT------------------CGAACGTTT--------------------CGTTT.................................................................................................................................................................2611.001000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TTA----AAGTGGTTCAA--AGTCCG--AA............................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................AATACG---GCGCGTTATCTTG.................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................ATCTTGAACTTGAC----------T--------CAAGTATTTGGTT-........................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GTCCG--AAA-T---GTCT---------AT-----------------------------------------------GAATGT..2111.001000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TTTTA----AAGTGGTTCAA--AGTCCG--A.............................................................................2311.001000000000000000000010000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ACGTTT--------------------CGTTTTTCC-TA-------------------GTT....................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................CTGGAATC--AGATAATCGGC.......................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................TTTTA----AAGTGGTTCAA--AGTCCG--AAA-T---......................................................................2611.001000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................................GAC----------T--------CAAGTATTTGGTT-AATAAGT.................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................A--------------------A-ATTTTA----AAGTGGTTCAA--AG....................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.................................................AGTAGACGAC--------GAC---TC-G------------------ATCTGGAAT.....................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
...................................TTGGCGATCCTACAAGTAGACGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................CGCCATTGCGCGTATGCATT...................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................TCTT-TTAGAATTT------------------CGAACGTTT--------------------CGTT..................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................CAATGGCTGCAGTCTGCGGC.......................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AAGTGGTTCAA--AGTCCG--AA............................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................ATTT------------------CGAACGTTT--------------------CGTTTTTCC-TA-------------------.......................................................................................................................................2411.001000000000000000000000000000000000000100000000000000000000000000
...............................................................................................ATCTGGAATC--AGATAATCGGCCA.....................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.............................GCAGATTTGGCGATCCTATTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501000000000000000000000000000000000000000000000000000000000001000
droMoj3
ACCTTCTTATCGGCGGCTTTGTGTGCTTGGCAGATATGGCGGTCATATAAGTAAACGAT--------AAGCACTCTG------------------AT-TGGGAT--------A--AGTCAGCC-ATT-GCCAAT----GCAGGCGGCAACGAAGCG---GCGCGTAATCTTGAACTTGGC----------C-------CCAAGTATTTGGTTTTATAAGTT-AGT-TG--AACGCTGTGGCGTATGCATTTCTT-TTAGAATTT------------------CGAT-ATT------------------TTTCGTTTTTCC-TA-------------------GTTA--------------------A-ATTTTT---AAAGTGGTTCAG--AGTCCG--AAA-TGTCAACATGAATGTTTCT-CTATAGT--------------------------------------TGTGCATATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................G------------------AT-TGGGAT--------A--AGTCAGCC-ATT-GC...........................................................................................................................................................................................................................................................................................................................................................2311.001100000
.....................................................................................................................TCAGCC-ATT-GCCAAT----GCAGG..............................................................................................................................................................................................................................................................................................................................................2011.001100000
............................................................................................................................................................................................................................................................................................AT-ATT------------------TTTCGTTTTTCC-TA-------------------GTTA--------------------A-AT...........................................................................................................2611.001100000
...................................................................................................................................................AACGAAGCG---GCGCGTAATCTTG.................................................................................................................................................................................................................................................................................................................2211.001100000
...................................................................................................................................................................................................................................................................AATTT------------------CGAT-ATT------------------TTTCGTT..................................................................................................................................................................1911.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................CCG--AAA-TGTCAACATGAATGT...........................................................2111.001000010
......................GTGCTTGGCAGATATGGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
...........................................................................................................................................................................................................................TT-AGT-TG--AACGCTGTGGCGTATGCAT....................................................................................................................................................................................................................................2611.001001000
.....................................................................GCACTCTG------------------AT-TGGGAT--------A--A.........................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...............................................................................................................................................................................................................................GT-TG--AACGCTGTGGCGTATGC......................................................................................................................................................................................................................................2111.001000001
............................................................................................................................................AGGCGGCAACGAAGCG---GC............................................................................................................................................................................................................................................................................................................................1811.001100000
.................................................................................................................................................................................................................................................................................................................................TA-------------------GTTA--------------------A-ATTTTT---AAAGTGGT............................................................................................2111.001010000
.......................................................................................................................................................................TCTTGAACTTGGC----------C-------CCAAGTA................................................................................................................................................................................................................................................................................2111.001000010
..................................................................................................................................................................CGTAATCTTGAACTTGGC----------C-------C......................................................................................................................................................................................................................................................................................2011.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................CAG--AGTCCG--AAA-TGTCAACATGAAT.............................................................2511.001100000
.....................................................................................................................TCAGCC-ATT-GCCAAT----GCAGGC.............................................................................................................................................................................................................................................................................................................................................2111.001000010
droGri2
ACCTTTCTATCGGCTGCGTTGTGCGCCTGGCAGATCTGGCGATCCTATAAGTAGACGACGAT-----GTA---------------------------ACAG-----------------------------------------TCAACAGTAATACG---GCGAGTTATCTTGAACTTGAC----------T--------CAAGGGTTCGGTA-TATAAGTTTAGTT-A--AACGCCACTGCGTATGCATTTCTT-TTAGAATTT------------------CGAT-GTTTTTTTTTT-------------CGTTTTTCCTTA-------------------GTTA--------------------A-ATTTTT---AAAGTGGTTCTAAAAGTCCA--AAT-TGTCGT---------------------------------------------------------AT-GAGTGTTCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................CA--AAT-TGTCGT---------------------------------------------------------AT-GAGTGTT.2011.00101
...................................................................GTA---------------------------ACAG-----------------------------------------TCAACAGTAATACG---GCGAGT........................................................................................................................................................................................................................................................................................................................2711.00101
.......................................................................................................................................................ATACG---GCGAGTTATCTTGA................................................................................................................................................................................................................................................................................................................1911.00101

Generated: 05/19/2015 at 05:28 AM