ID:

dsi_9594

 Coordinate:

node_88769:392-503 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.5 -4.4 -3.8

Flybase annnotation

intergenic

No Repeatable elements found

mature
  1. node_37002:793-813 -
  2. dsi_23505  node_41821:169-189 +
  3. dsi_9594  node_88769:435-455 +
star
  1. node_37002:759-785 -
  2. dsi_23505  node_41821:197-223 +
  3. dsi_9594  node_88769:463-489 +

Sense Strand Reads

TCCTGAACTATGGTTTTAAGTAGACCAGCCGACCACCCTGACGCTTCCGGGTAACTTGACGACTTGATGGTTTCCGTTGGCCAGCGAGTCGCTTTTCTGTCGACCCACTGGACCAGCCCGTTGCCTTTGCTAACTAATCGGTTAACTCTTTCGCAAACGCAGAATCCCAATGCCACCGTCATGCCTTTGATCCAAATGCAGTTGCAGGCCGC
*********************************************************************************************.....((.((((...(((...(((...........)))..)))...)))).))..**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 M023
head
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 M024
male body
..............TTTAAGTAGACCAGCCGACCACCCTGA........................................................................................................................................................................... 27 0 3 2.00 6 4 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TGATCCAAATGCAGTTGCAGGCC.. 23 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................TTTCTGTCGACCCACTGGACC.................................................................................................. 21 0 3 1.33 4 0 0 0 4 0 0 0 0 0 0 0
...TGAACTATGGTTTTAAGTAGACCAGC....................................................................................................................................................................................... 26 0 3 1.00 3 0 1 0 0 0 1 0 0 0 1 0
..............................................................................................................................................................GCACAATCCCAATGCCTACGTCATGC............................ 26 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................TTTGATCCAAACGCAGTTGTAGC.... 23 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................CGCTTTTCTGTCGACCCACTGGACC.................................................................................................. 25 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0
.................................CACCCTGACGCTTCCGG.................................................................................................................................................................. 17 0 3 0.67 2 0 0 0 0 0 0 2 0 0 0 0
.........................................................................................................................TGCCTTTGCTAACTAATCGGTTAACTC................................................................ 27 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0
...................GTAGACCAGCCGACCACCCTG............................................................................................................................................................................ 21 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0
................TAAGTAGACCAGCCGACCACC............................................................................................................................................................................... 21 0 3 0.67 2 0 0 0 0 0 0 0 2 0 0 0
.................AAGTAGACCAGCCGACCACCC.............................................................................................................................................................................. 21 0 3 0.67 2 0 0 0 0 0 0 0 0 2 0 0
TCCTGAACTATGGTTTTAAGTAGACC.......................................................................................................................................................................................... 26 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CTTTGCTAACTAATCGGTTAA................................................................... 21 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0
............................................TTCCGGGTAACTTGACGACTTGATGGT............................................................................................................................................. 27 0 3 0.67 2 0 0 0 0 0 0 0 2 0 0 0
...............................................CGGGTAACTTGACGACTTGATGGTT............................................................................................................................................ 25 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0
.............TTTTAAGTAGACCAGCCGACCACCC.............................................................................................................................................................................. 25 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................CACTGGACCAGCCCGTTGCCT...................................................................................... 21 0 3 0.67 2 0 0 0 2 0 0 0 0 0 0 0
.............................................................................................................................................................................CACCGTCAGGCCTTTGATCCAAATGC............. 26 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................ATCGGTTAACTCTTTCGCAAACGCAG.................................................. 26 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0
.......CTATGGTTTTATGTA.............................................................................................................................................................................................. 15 1 20 0.50 10 10 0 0 0 0 0 0 0 0 0 0
...................................................TAACTTGACGACTTGATGGTT............................................................................................................................................ 21 0 4 0.50 2 0 1 0 0 0 0 0 0 1 0 0
.....................................................ACTTGACGACTTGATGGTTTCCGTTG..................................................................................................................................... 26 0 4 0.50 2 0 0 0 0 2 0 0 0 0 0 0
............................................TTCCGGGTAACTTGACGACT.................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.................AAGTAGACCAGCCGACCACCCTGACGC........................................................................................................................................................................ 27 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
...............................ACCACCCTGACGCTTCCGG.................................................................................................................................................................. 19 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................CTAACTAATCGGTTAACTCTTTCGC.......................................................... 25 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
................TGGGTAGACCAGCCGACCACCC.............................................................................................................................................................................. 22 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................TTCTGTCGACCCACTGGACCAGCCCGT........................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
...............TTAAGTAGACCAGCCGACCACCCTGA........................................................................................................................................................................... 26 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.........................CAGCCGACCACCCTGACGCTTCCGGA................................................................................................................................................................. 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................CGACCCACTGGACCAGCCCGTTGCCTT..................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
..................AGTAGACCAGCCGACCACCCTGACG......................................................................................................................................................................... 25 0 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0
..............................................CCGGGTAACTTGACGACTTGG................................................................................................................................................. 21 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
.............TTTTAAGTAGACCAGCCGACC.................................................................................................................................................................................. 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
..........TGGTTTTAGGTAGACCAGCCG..................................................................................................................................................................................... 21 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................AACTAATCGGTTAACTCTTTCGCAAACGC.................................................... 29 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
.................AAGTAGACCAGCCGACCACC............................................................................................................................................................................... 20 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
..............TTTAAGTAGACCAGCCGACCACCCTGACGC........................................................................................................................................................................ 30 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
TCCTGAACTATGGTTTTAAGTAGACCA......................................................................................................................................................................................... 27 0 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0
................................CCACCCTGACGCTTCCGG.................................................................................................................................................................. 18 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0
............................................................................................TTTTCTGTCGACCCACTGGA.................................................................................................... 20 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
..............TTTAAGTAGACCAGCCGACCACCCTG............................................................................................................................................................................ 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.............TTTTAAGTAGACCAGCCGACCAC................................................................................................................................................................................ 23 0 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0
................................................................................................CTGTCGACCCACTGGACCAGCC.............................................................................................. 22 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
..............TTTAAGTAGACCAGCCGACCACC............................................................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
..............................................CCGGGTAACTTGACGACTTGA................................................................................................................................................. 21 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0
TCCTGAACTATGGTTTTAAGTAGACCAGC....................................................................................................................................................................................... 29 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
.............................................TCCGGGTAGCTTGACGACTTG.................................................................................................................................................. 21 1 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0
...............................................CGGGTAACTTGACGACTTGATGGTTTC.......................................................................................................................................... 27 0 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0
.............................................TCCGGGTAACTTGACGACTTGATGGTT............................................................................................................................................ 27 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0
.CCTGAACTATGGTTTTAAGTAGAC........................................................................................................................................................................................... 24 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.............................................TCCGGGTAACTTGACGACTTGATGGT............................................................................................................................................. 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
..............................................CCGGGTAACTTGACGACTTGATG............................................................................................................................................... 23 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
..........................AGCCGACCACCCTGACGCTTCCGGAA................................................................................................................................................................ 26 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................ATCGGTTAACTCTTTCGCAAAC...................................................... 22 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
..CTGAACTATGGTTTTAAGTTGACCA......................................................................................................................................................................................... 25 1 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0
..................................................GTAACTTGACGACTTGATGGT............................................................................................................................................. 21 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
................................................................TGATGGTTTCCGTTGGCCAGCGAGTCGT........................................................................................................................ 28 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
..................................................GTAACTTGACGACTTGATGGTTTCCGTT...................................................................................................................................... 28 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0
........................................................TGACGACTTGATGGTTTCCGTTGGC................................................................................................................................... 25 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................CGACTTGATGGTTTCCGTTGGC................................................................................................................................... 22 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................GTTAACTCTTTCGCAAACGCA................................................... 21 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................CTAATCGGTTAACTCTTTCGC.......................................................... 21 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0
...................................................TAACTTGACGACTTGATGGTTT........................................................................................................................................... 22 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0
..................................................................................AGCGAGTCGCTTTTCTGTCGA............................................................................................................. 21 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
..................................................GTAACTTGACGACTTGATGG.............................................................................................................................................. 20 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................TTGACGACTTGATGGTTTCCGTTGGC................................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................GCAAACTCCGAATACCAATG........................................ 20 3 12 0.25 3 2 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................TCTTTCGCAAACGCAGAATCCCAATGCC...................................... 28 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................................TCGGTTAACTCTTTCGCAAAC...................................................... 21 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
...................................................TAACTTGACGACTTGATGGTTTCCGT....................................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................ACTTGATGGTTTCCGTTGGCC.................................................................................................................................. 21 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................ATCGGTTAACTCTTTCGCAAACGCAGAA................................................ 28 0 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................................GGTTAACTCTTTCGCAAACGC.................................................... 21 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................TCGGTTAACTCTTTCGCAAACGCAG.................................................. 25 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1
.........................................................................................................................................TCGGTTAACTCTTTCGCAAACGCAGA................................................. 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
TCCTGAACTATGGTTTTAAGTTGACCAGC....................................................................................................................................................................................... 29 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................TCGGTTAACTCTTTCGCAAACGCAGAA................................................ 27 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................TAGGAATCCCAATGCCACCGT................................. 21 3 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0
......ACTATGGTTTTATGTA.............................................................................................................................................................................................. 16 1 20 0.20 4 4 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TGATCCAAATGGAGATTCAGG.... 21 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
.....AACTATGGTTTTATGTA.............................................................................................................................................................................................. 17 1 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TGCTAACTAGGCGGTTA.................................................................... 17 2 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0
.............................................TCCGGGTAGCTAGACG....................................................................................................................................................... 16 2 20 0.10 2 0 0 0 0 0 0 0 0 0 2 0
................................................................................CCAGCGAGTCGCCTTT.................................................................................................................... 16 1 14 0.07 1 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................CGACGCACTGGACCA................................................................................................. 15 1 19 0.05 1 1 0 0 0 0 0 0 0 0 0 0
.................CGGTAGACCAGCCGAC................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................TTTCGCAAACGCAAAA................................................ 16 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AGGACTTGATACCAAAATTCATCTGGTCGGCTGGTGGGACTGCGAAGGCCCATTGAACTGCTGAACTACCAAAGGCAACCGGTCGCTCAGCGAAAAGACAGCTGGGTGACCTGGTCGGGCAACGGAAACGATTGATTAGCCAATTGAGAAAGCGTTTGCGTCTTAGGGTTACGGTGGCAGTACGGAAACTAGGTTTACGTCAACGTCCGGCG
****************************************************************.....((.((((...(((...(((...........)))..)))...)))).))..********************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 SRR902008
ovaries
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
 M053
female body
 M023
head
.......................................................................................................................................................................................GGAAACTAGGTTTACGTCAAC........ 21 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TTGGCAGTACGGAAACTAGGTT................. 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
........................GGTCGGCTGGTGGGACTGCGA....................................................................................................................................................................... 21 0 4 1.00 4 3 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GGGTTACGGTGGCAGTACGGA.......................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TACGGTGGCAGTACGGAAACTAGGTTT................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................TGTGGCAGTACGGAAACTAGGT.................. 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..............................................GGCCCATTGAACTGCTGAACT................................................................................................................................................. 21 0 3 1.00 3 1 0 2 0 0 0 0 0 0 0 0
...........................CGGCTGGTGGGACTGCGAAGGCCCATT.............................................................................................................................................................. 27 0 3 0.67 2 0 0 0 1 1 0 0 0 0 0 0
.................................................................................................................GTCGGGCAACGGAAACGATTG.............................................................................. 21 0 3 0.67 2 0 0 0 1 1 0 0 0 0 0 0
......................................ACTGCGAAGGCCCATTGAACT......................................................................................................................................................... 21 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0
...........................CGGCTGGTGGGACTGCGAAGGCCCAT............................................................................................................................................................... 26 0 3 0.67 2 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................AGCCAATTGAGAAAGCGTTT....................................................... 20 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0
.....................................................TGAACTGCTGAACTACCAAAGGCAACCGGT................................................................................................................................. 30 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................AATTGAGAAAGCGTTTGCGTC.................................................. 21 0 4 0.50 2 1 1 0 0 0 0 0 0 0 0 0
...........................................GAAGGCCCATTGAACTGCTGA.................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.............................................AGGCCCATTGAACTGCTGAACTACCAA............................................................................................................................................ 27 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
.............................................AGGCCCATTGAACTGCTGAACTACCA............................................................................................................................................. 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
..............................CTGGTGGGACTGCGAAGGCCCA................................................................................................................................................................ 22 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
.............AAAATTCATCTGGTCGGCTGGT................................................................................................................................................................................. 22 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................CGGAAACGATTGATTAGCCAA..................................................................... 21 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................GCAACGGAAACGATTGAT............................................................................ 18 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................GCTGGGTGACCTGGTCGGGCAA.......................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GGGCAACGGAAACGATT............................................................................... 17 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................CCTGGTCGGGCAACGGAAAC................................................................................... 20 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................TGGGTGACCTGGTCGGGC............................................................................................ 18 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................GATTGATTAGCCAATTGAGAA.............................................................. 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
...............................TGGTGGGACTGCGAAGGCCCAT............................................................................................................................................................... 22 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................GAAACGGTTGGTTAGCCAATTGA................................................................. 23 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
...........................CGGCTGGTGGGACTGCGAAGGCCCA................................................................................................................................................................ 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
AGGACTTGATACCAAAATTCATC............................................................................................................................................................................................. 23 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.GGACTTGATACCAAAATTCATCTGGT......................................................................................................................................................................................... 26 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................CGATTGATTAGCCAATTGAGA............................................................... 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................CTGGTCGGGCAACGGAAACGATTGATT........................................................................... 27 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................................GAAACGATTGATTAGCCAA..................................................................... 19 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
AGGACTTGATACCAAAATTC................................................................................................................................................................................................ 20 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................GACCTGGTCGGGCAACGGAAA.................................................................................... 21 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................CTGGGTGACCTGGTCGGGCAA.......................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................TTGATTAGCCAATTGAGAAA............................................................. 20 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................AAAGACAGCTGGGTGACCTGG.................................................................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................AGCCAATTGAGAAAGCGTTTGCGTCTT................................................ 27 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................AGCGAAAAGACAGCTGGGTGA....................................................................................................... 21 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................AGCGAAAAGACTGCTGGGTGA....................................................................................................... 21 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................CAAAGGCAACCGGTCGCTCAG.......................................................................................................................... 21 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................GCTGAACTACCAAAGGCAACCGGT................................................................................................................................. 24 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
..........................TCGGCTGGTGGGACTGCGAAG..................................................................................................................................................................... 21 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
........................GGTCGGCTGGTGGGACTGCGAA...................................................................................................................................................................... 22 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................AAAGGCAACCGGTCGCTCAGC......................................................................................................................... 21 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................AGCCAATTGAGAAAGCGTTTG...................................................... 21 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................CTGCTGAACTACCAAAGGCAA...................................................................................................................................... 21 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................GTCTTAGGGTTACGGTGGCAG................................ 21 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................GGTCGCTCAGCGAAAAGACAG............................................................................................................... 21 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
............................GGCTGCTGGGACTGCGAAGGC................................................................................................................................................................... 21 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
........................................................................................AGCGAAGAGACAGCTG............................................................................................................ 16 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................AAGCGTTTGCGTCTTAGGGTT.......................................... 21 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................GGTCGGGCAAGGGAA..................................................................................... 15 1 20 0.20 4 0 4 0 0 0 0 0 0 0 0 0
................................................................................................................................................TGAGAAAGCGTTTGCGTCTTAGGGT........................................... 25 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................TGGTCGGGCAAGGGAACCG.................................................................................. 19 2 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0
..............................CTGGTTGGACTGCGA....................................................................................................................................................................... 15 1 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TTGCGTCTTAGAGTTACT....................................... 18 2 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0
......................................................................................................TGGGAGACATGGTCGG.............................................................................................. 16 2 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0
..................................................................................................................TCGGGCAAGGGAAACG.................................................................................. 16 1 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................CGTTATAGGGTTACGGTGGG.................................. 20 3 13 0.08 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................ACGTTTGATTAGCCA...................................................................... 15 1 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................TGGTCATGCAACGGATACG.................................................................................. 19 3 16 0.06 1 0 0 0 0 0 0 0 0 0 1 0
.......................TGGTCGACTGGTGGG.............................................................................................................................................................................. 15 1 16 0.06 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................CGGGCTACAGAAAAGATTG.............................................................................. 19 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 1
.................................................................................................................GTCGGGCAATGGAACCG.................................................................................. 17 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
....................ATCGGGACGGCGGGTGGGA............................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
......................CTGGGCGGCCGGTAGGACTG.......................................................................................................................................................................... 20 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 node_88769:342-553 + dsi_9594 TCCTGAACTATGGTTTTAAGTAG----ACCAGCCGACCAC--------------CCTGACGCTTCCGGG-TAACTTGACGACTTGATGGTTTCCGTTGGCC-------AGCGAGTCGCTT--TTCT--GTCGACCCACTGGACCAG----------CCC-------------------------------------------------------------------------------GTT-GCCTTTGCTA-ACTAATCGGTT-----A-ACTCTTTCGC-AAACGCAGAATCCCAATGCCACCGTCATGCCTTTGATCCAAATGCAGTTGCAGGCCGC---
droSec2 scaffold_1121:2990-3201 + dse_786 TCCTGAACTATGGTTTTAAGTTG----ACCAGCCGACCAC--------------CCTGACGCTTCCGGG-TAACTTGACGACTTGATGGTTTCCGTTGGCC-------AGCGAGTCGCTT--TTCT--GTCGACCCACTGGACCAG----------CCC-------------------------------------------------------------------------------GTT-GCCTTTGCTA-ACTAATCGGTT-----A-ACTCTTTCGC-AAACGCAGAATCCCAATGCCACCGTCAAGCCTTTGATCCAAATGCCGTTGCAGGCCGC---
droEug1 scf7180000405130:9144-9407 + TCCTGAACTATGGTTTTTAGTAG----ACCAGCAGACCAG--------------CATGACGCATCCGGT-TTACTTGACGACTTGATGGTTTCCGTTGCCA-------AGCGAGTCTCTA--TTTTT-GTTGACCATGTGGATCAG----------CACGCTGAAAGTGATGTTGCCCGGCGGAATTTAGCGACGAAAACAGGCAGAA---------------A-------------------CCTTTGCCA-ACTAATTCGCTAA-TTAAACTCTTTTGC-AAACGCAGAACCCCAATGCCATCGACAAGCCTTTGATTCAACAGCCATTGCAATCCAT---
droTak1 scf7180000415769:384023-384294 + TCCTGAACTATGGTTTTTAGTAG----GCCAGCCGACCAG--------------CCTGACGCTTCCGGGTTGACTTGACGACTTGATGGCTTCCGTTGGCCAGAGGCCAGCGAGTCTCTT--TTTTTGGTTGACCCACTGGATTAG-----TGGATCACGCTGCAAGTGATTTTCC---------------------AACAGG----------------GGTTG-CTCCCGTTCTCCCGTTTTTCTTCGCCA-ACTGACCAACTAA-TGAAACTCTTTTGC-AAACGCAGAATCCCAATGCCACCGCCAAGCCTTTGATCCAACAGCCGTTGCAG--CAG---
droEle1 scf7180000491087:960952-961216 + TCCTGAACTATGGTTTTTAGTAT----ACCAGCCGAGCAG--------------CCTGAGACTTCCGTG-TAACTTGACGATTTGATGGTTTCCGTTGGCC-------AGCGAGTCTCTT--TTTT--GTTAGCACACTGGATTAG----------CCCGCTGCAAGTGATTTTGTCCAGGGGAATCAAGCGACGAAAAC---TCGTT---------------C-------------------CCTTCACCCCACTAATCAGCTAA-TGAAACTCTTTTGCAAAACCCAGAATCCCAGTGCCAGCGTCAAGCCCTTGATCCAACCGCCATTGCAGGGCAATAA
droRho1 scf7180000777745:57755-58015 + TCCTGAACTATGGTTTTTAGTAG----ACCAGCCGACCAG--------------CCTGACGCTTTCGTG-TAACTTGACGACTTGATTGTTTCCGTTGGCC-------AGCGAGTCTCTT--TTTT--GTTAACACACTGGATAAG----------CCCGCTGCAAGTGATTTTGTCTAGGGGAACCAAGCGACGAAAAT---TCGTT---------------C-------------------CCTTCACCC-ACTAATCCGCTAAATGAAACTCTTTCGC-AAACGCAGAATCCCAATGCCACCGCCAAGCCTTTGATCCAACCGCCGTTGCAGGGCAA---
droBip1 scf7180000396696:167566-167837 + TCCTGAACTATGGTTTTTAGTAGATTAACCAGCCAACCAGACAGCCTGACAGCCCCTGACGCTTCCGTT-TATGATGA-AACTCGATGGGTTCCGTTGGCA-------A---AGCCTCAACATTTTT-TTTAA--ATATATATCCGTAATATGGATTCCATAGCATATATT-------------------------AAACATGCACAGCCCCCTTCTGGGGTTCCCACCC--------ATT------------------CCACTAA-CTAAATAATTTTGC-AAAAACAGAATCCGAATGCCAACGCCCAGCCGTTGATCCAGCCTCCATTGCAGGCCGC---
dp5 XL_group1a:1174497-1174579 + TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTTTTCTT-GATGAATAA-----TGAAA-TTTTTCAA-TAATATAGAATCCGAATGTCCCGGCCAAGCCCTTGATTCAACCGCCGGC------------
droPer2 scaffold_26:1289808-1289890 + TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTTTTCTT-GATGAATAA-----TGAAA-TTTTTCAA-TAATTTAGAATCCGAATGTCGCGGCCAAGCCCTTGATTCAACCGCCGGC------------
droGri2 scaffold_15081:1180555-1180586 + -CCTGAACTATGGTTTTTAGTAG----AACCGCCGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCCTGAACTATGGTTTTAAGTAG----ACCAGCCGACCAC--------------CCTGACGCTTCCGGG-TAACTTGACGACTTGATGGTTTCCGTTGGCC-------AGCGAGTCGCTT--TTCT--GTCGACCCACTGGACCAG----------CCC-------------------------------------------------------------------------------GTT-GCCTTTGCTA-ACTAATCGGTT-----A-ACTCTTTCGC-AAACGCAGAATCCCAATGCCACCGTCATGCCTTTGATCCAAATGCAGTTGCAGGCCGC---SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............TTTAAGTAG----ACCAGCCGACCAC--------------CCTGA............................................................................................................................................................................................................................................................................................2732.00600000024000000000
...........................................................................................................................................................................................................................................................................................................................TGATCCAAATGCAGTTGCAGGCC.....2312.00200200000000000000
.......................................................................................................................T--TTCT--GTCGACCCACTGGACC.......................................................................................................................................................................................................2131.33440000000000000000
...TGAACTATGGTTTTAAGTAG----ACCAGC......................................................................................................................................................................................................................................................................................................................2631.00300010010010000000
...................................................................................................................CGCTT--TTCT--GTCGACCCACTGGACC.......................................................................................................................................................................................................2530.67200200000000000000
.....................................CAC--------------CCTGACGCTTCCGG...................................................................................................................................................................................................................................................................................1730.67200000000002000000
................................................................................................................................................................................................................................................T-GCCTTTGCTA-ACTAATCGGTT-----A-ACTC....................................................................2730.67200200000000000000
...................GTAG----ACCAGCCGACCAC--------------CCTG.............................................................................................................................................................................................................................................................................................2130.67200000002000000000
................TAAGTAG----ACCAGCCGACCAC--------------C................................................................................................................................................................................................................................................................................................2130.67200000000000002000
.................AAGTAG----ACCAGCCGACCAC--------------CC...............................................................................................................................................................................................................................................................................................2130.67200000000000020000
TCCTGAACTATGGTTTTAAGTAG----ACC.........................................................................................................................................................................................................................................................................................................................2630.67200000002000000000
....................................................................................................................................................................................................................................................CTTTGCTA-ACTAATCGGTT-----A-A.......................................................................2130.67200000011000000000
..............................................................TTCCGGG-TAACTTGACGACTTGATGGT.............................................................................................................................................................................................................................................................2730.67200000000000002000
.................................................................CGGG-TAACTTGACGACTTGATGGTT............................................................................................................................................................................................................................................................2530.67200000011000000000
.............TTTTAAGTAG----ACCAGCCGACCAC--------------CC...............................................................................................................................................................................................................................................................................................2530.67200000011000000000
.......................................................................................................................................CACTGGACCAG----------CCC-------------------------------------------------------------------------------GTT-GCCT.................................................................................................2130.67220000000000000000
.................................................................................................................................................................................................................................................................ATCGGTT-----A-ACTCTTTCGC-AAACGCAG.....................................................2640.50200000002000000000
......................................................................TAACTTGACGACTTGATGGTT............................................................................................................................................................................................................................................................2140.50200000010000010000
........................................................................ACTTGACGACTTGATGGTTTCCGTTG.....................................................................................................................................................................................................................................................2640.50200000000200000000
..............................................................TTCCGGG-TAACTTGACGACT....................................................................................................................................................................................................................................................................2030.33100000001000000000
.................AAGTAG----ACCAGCCGACCAC--------------CCTGACGC.........................................................................................................................................................................................................................................................................................2730.33100000010000000000
...................................ACCAC--------------CCTGACGCTTCCGG...................................................................................................................................................................................................................................................................................1930.33100000000001000000
.........................................................................................................................................................................................................................................................CTA-ACTAATCGGTT-----A-ACTCTTTCGC-.............................................................2530.33100000010000000000
..........................................................................................................................TTCT--GTCGACCCACTGGACCAG----------CCC-------------------------------------------------------------------------------GT.......................................................................................................2730.33100000001000000000
...............TTAAGTAG----ACCAGCCGACCAC--------------CCTGA............................................................................................................................................................................................................................................................................................2630.33100000000100000000
.............................CAGCCGACCAC--------------CCTGACGCTTCCGGA-.................................................................................................................................................................................................................................................................................2630.33100000001000000000
..................................................................................................................................CGACCCACTGGACCAG----------CCC-------------------------------------------------------------------------------GTT-GCCTT................................................................................................2730.33100000001000000000
..................AGTAG----ACCAGCCGACCAC--------------CCTGACG..........................................................................................................................................................................................................................................................................................2530.33100000000010000000
................................................................CCGGG-TAACTTGACGACTTGG.................................................................................................................................................................................................................................................................2130.33110000000000000000
.............TTTTAAGTAG----ACCAGCCGACC.................................................................................................................................................................................................................................................................................................................2130.33100000010000000000
...........................................................................................................................................................................................................................................................A-ACTAATCGGTT-----A-ACTCTTTCGC-AAACGC.......................................................2930.33100100000000000000
.................AAGTAG----ACCAGCCGACCAC--------------C................................................................................................................................................................................................................................................................................................2030.33110000000000000000
..............TTTAAGTAG----ACCAGCCGACCAC--------------CCTGACGC.........................................................................................................................................................................................................................................................................................3030.33100000010000000000
TCCTGAACTATGGTTTTAAGTAG----ACCA........................................................................................................................................................................................................................................................................................................................2730.33100000000010000000
....................................CCAC--------------CCTGACGCTTCCGG...................................................................................................................................................................................................................................................................................1830.33100000000001000000
......................................................................................................................TT--TTCT--GTCGACCCACTGGA.........................................................................................................................................................................................................2030.33110000000000000000
..............TTTAAGTAG----ACCAGCCGACCAC--------------CCTG.............................................................................................................................................................................................................................................................................................2630.33100000001000000000
.............TTTTAAGTAG----ACCAGCCGACCAC--------------.................................................................................................................................................................................................................................................................................................2330.33100000000000010000
............................................................................................................................CT--GTCGACCCACTGGACCAG----------CC.........................................................................................................................................................................................2230.33100100000000000000
..............TTTAAGTAG----ACCAGCCGACCAC--------------C................................................................................................................................................................................................................................................................................................2330.33100000001000000000
................................................................CCGGG-TAACTTGACGACTTGA.................................................................................................................................................................................................................................................................2130.33100000000001000000
TCCTGAACTATGGTTTTAAGTAG----ACCAGC......................................................................................................................................................................................................................................................................................................................2930.33100000010000000000
.................................................................CGGG-TAACTTGACGACTTGATGGTTTC..........................................................................................................................................................................................................................................................2730.33100000000010000000
...............................................................TCCGGG-TAACTTGACGACTTGATGGTT............................................................................................................................................................................................................................................................2730.33100000000000001000
.CCTGAACTATGGTTTTAAGTAG----AC..........................................................................................................................................................................................................................................................................................................................2430.33100000000100000000
...............................................................TCCGGG-TAACTTGACGACTTGATGGT.............................................................................................................................................................................................................................................................2630.33100000001000000000
................................................................CCGGG-TAACTTGACGACTTGATG...............................................................................................................................................................................................................................................................2330.33100000000100000000
..............................AGCCGACCAC--------------CCTGACGCTTCCGGA-A................................................................................................................................................................................................................................................................................2630.33100000010000000000
.................................................................................................................................................................................................................................................................ATCGGTT-----A-ACTCTTTCGC-AAAC.........................................................2240.25110000000000000000
....................................................................G-TAACTTGACGACTTGATGGT.............................................................................................................................................................................................................................................................2140.25110000000000000000
...................................................................................TGATGGTTTCCGTTGGCC-------AGCGAGTCGT.................................................................................................................................................................................................................................2840.25100000001000000000
....................................................................G-TAACTTGACGACTTGATGGTTTCCGTT......................................................................................................................................................................................................................................................2840.25100010000000000000
...........................................................................TGACGACTTGATGGTTTCCGTTGGC...................................................................................................................................................................................................................................................2540.25100000010000000000
..............................................................................CGACTTGATGGTTTCCGTTGGC...................................................................................................................................................................................................................................................2240.25100000010000000000
.....................................................................................................................................................................................................................................................................GTT-----A-ACTCTTTCGC-AAACGCA......................................................2140.25100000010000000000
..............................................................................................................................................................................................................................................................CTAATCGGTT-----A-ACTCTTTCGC-.............................................................2140.25100010000000000000
......................................................................TAACTTGACGACTTGATGGTTT...........................................................................................................................................................................................................................................................2240.25100000000000001000
............................................................................................................AGCGAGTCGCTT--TTCT--GTCGA..................................................................................................................................................................................................................2140.25100000001000000000
....................................................................G-TAACTTGACGACTTGATGG..............................................................................................................................................................................................................................................................2040.25100000000100000000
..........................................................................TTGACGACTTGATGGTTTCCGTTGGC...................................................................................................................................................................................................................................................2640.25100000001000000000
.................................................................................................................................................................................................................................................................................TCTTTCGC-AAACGCAGAATCCCAATGCC.........................................2840.25100000000000001000
..................................................................................................................................................................................................................................................................TCGGTT-----A-ACTCTTTCGC-AAAC.........................................................2140.25100000001000000000
......................................................................TAACTTGACGACTTGATGGTTTCCGT.......................................................................................................................................................................................................................................................2640.25100000001000000000
................................................................................ACTTGATGGTTTCCGTTGGCC-------...........................................................................................................................................................................................................................................2140.25100000010000000000
.................................................................................................................................................................................................................................................................ATCGGTT-----A-ACTCTTTCGC-AAACGCAGAA...................................................2840.25100000000000010000
....................................................................................................................................................................................................................................................................GGTT-----A-ACTCTTTCGC-AAACGC.......................................................2140.25100000010000000000
..................................................................................................................................................................................................................................................................TCGGTT-----A-ACTCTTTCGC-AAACGCAG.....................................................2540.25101000000000000000
..................................................................................................................................................................................................................................................................TCGGTT-----A-ACTCTTTCGC-AAACGCAGA....................................................2640.25100000001000000000
..................................................................................................................................................................................................................................................................TCGGTT-----A-ACTCTTTCGC-AAACGCAGAA...................................................2740.25100000000100000000
droSec2
TCCTGAACTATGGTTTTAAGTTG----ACCAGCCGACCAC--------------CCTGACGCTTCCGGG-TAACTTGACGACTTGATGGTTTCCGTTGGCC-------AGCGAGTCGCTT--TTCT--GTCGACCCACTGGACCAG----------CCC-------------------------------------------------------------------------------GTT-GCCTTTGCTA-ACTAATCGGTT-----A-ACTCTTTCGC-AAACGCAGAATCCCAATGCCACCGTCAAGCCTTTGATCCAAATGCCGTTGCAGGCCGC---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................CCAC--------------CCTGACGCTTCCGG...................................................................................................................................................................................................................................................................................18200.1530030
.............TTTTAAGTTG----ACCAGCCGACC.................................................................................................................................................................................................................................................................................................................21200.1021001
.............................................................................................................................................................................................................................................................................................................CACCGTCAAGCCTTTGATCCAAATGC................26160.0611000
............................................................................................................................................................................................................................................................................................................................GATCCAAATGCCGTTGCAGGC......21160.0611000
...........................................................................................................................................................................................................................................................................................................................TGATCCAAATGCCGTTGCA.........19160.0611000
....................................................................................................C-------AGCGAGTCGCTT--TTCT--GTCG...................................................................................................................................................................................................................21170.0610001
........................................................................................................................................................................................................................................................................................................................CTTTGATCCAAATGCCGTTGC..........21170.0610001
.......................................................................................................................................................................................................................................................................................................................CCTTTGATCCAAATGCCGTTG...........21170.0611000
.....................................................................................................................CTT--TTCT--GTCGACCCACTGGA.........................................................................................................................................................................................................21180.0611000
...........................................................................................................................................................................................................................................................A-ACTAATCGGTT-----A-ACTCTTTCGC-AAAC.........................................................27190.0510100
.................................CGACCAC--------------CCTGACGCTTCC.....................................................................................................................................................................................................................................................................................19200.0510010
...................GTTG----ACCAGCCGACCAC--------------CCTG.............................................................................................................................................................................................................................................................................................21200.0510001
...............................................................................................................................................................................................................................................................................................CAGAATCCCAATGCCACCGT....................................20200.0510010
.................AAGTTG----ACCAGCCGACCAC--------------CC...............................................................................................................................................................................................................................................................................................21200.0511000
.......................................................CTGACGCTTCCGGG-TAACTTG..........................................................................................................................................................................................................................................................................21200.0510100
..................................................................................................................................................................................................................................................................................................AATCCCAATGCCACCGTCAAG................................21200.0510001
............................................................................................................................CT--GTCGACCCACTGGACCAG----------CC.........................................................................................................................................................................................22200.0511000
..........................................................................................................................TTCT--GTCGACCCACTGGACCA......................................................................................................................................................................................................21200.0510100
...........................................................CGCTTCCGGG-TAACTTGACGACTT...................................................................................................................................................................................................................................................................24200.0511000
................................................................................................................................................................................................................................................................................................AGAATCCCAATGCCACCGTC...................................20200.0510010
.................................CGACCAC--------------CCTGACGCTTCCGG...................................................................................................................................................................................................................................................................................21200.0511000
.............................................................................................................................T--GTCGACCCACTGGACCAG----------CCT-------------------------------------------------------------------------------.........................................................................................................22200.0510100
droEug1
TCCTGAACTATGGTTTTTAGTAG----ACCAGCAGACCAG--------------CATGACGCATCCGGT-TTACTTGACGACTTGATGGTTTCCGTTGCCA-------AGCGAGTCTCTA--TTTTT-GTTGACCATGTGGATCAG----------CACGCTGAAAGTGATGTTGCCCGGCGGAATTTAGCGACGAAAACAGGCAGAA---------------A-------------------CCTTTGCCA-ACTAATTCGCTAA-TTAAACTCTTTTGC-AAACGCAGAACCCCAATGCCATCGACAAGCCTTTGATTCAACAGCCATTGCAATCCAT---SizeHit CountTotal NormTotal
No Reads
droTak1
TCCTGAACTATGGTTTTTAGTAG----GCCAGCCGACCAG--------------CCTGACGCTTCCGGGTTGACTTGACGACTTGATGGCTTCCGTTGGCCAGAGGCCAGCGAGTCTCTT--TTTTTGGTTGACCCACTGGATTAG-----TGGATCACGCTGCAAGTGATTTTCC---------------------AACAGG----------------GGTTG-CTCCCGTTCTCCCGTTTTTCTTCGCCA-ACTGACCAACTAA-TGAAACTCTTTTGC-AAACGCAGAATCCCAATGCCACCGCCAAGCCTTTGATCCAACAGCCGTTGCAG--CAG---SizeHit CountTotal NormTotal
No Reads
droEle1
TCCTGAACTATGGTTTTTAGTAT----ACCAGCCGAGCAG--------------CCTGAGACTTCCGTG-TAACTTGACGATTTGATGGTTTCCGTTGGCC-------AGCGAGTCTCTT--TTTT--GTTAGCACACTGGATTAG----------CCCGCTGCAAGTGATTTTGTCCAGGGGAATCAAGCGACGAAAAC---TCGTT---------------C-------------------CCTTCACCCCACTAATCAGCTAA-TGAAACTCTTTTGCAAAACCCAGAATCCCAGTGCCAGCGTCAAGCCCTTGATCCAACCGCCATTGCAGGGCAATAASizeHit CountTotal NormTotal
No Reads
droRho1
TCCTGAACTATGGTTTTTAGTAG----ACCAGCCGACCAG--------------CCTGACGCTTTCGTG-TAACTTGACGACTTGATTGTTTCCGTTGGCC-------AGCGAGTCTCTT--TTTT--GTTAACACACTGGATAAG----------CCCGCTGCAAGTGATTTTGTCTAGGGGAACCAAGCGACGAAAAT---TCGTT---------------C-------------------CCTTCACCC-ACTAATCCGCTAAATGAAACTCTTTCGC-AAACGCAGAATCCCAATGCCACCGCCAAGCCTTTGATCCAACCGCCGTTGCAGGGCAA---SizeHit CountTotal NormTotal
No Reads
droBip1
TCCTGAACTATGGTTTTTAGTAGATTAACCAGCCAACCAGACAGCCTGACAGCCCCTGACGCTTCCGTT-TATGATGA-AACTCGATGGGTTCCGTTGGCA-------A---AGCCTCAACATTTTT-TTTAA--ATATATATCCGTAATATGGATTCCATAGCATATATT-------------------------AAACATGCACAGCCCCCTTCTGGGGTTCCCACCC--------ATT------------------CCACTAA-CTAAATAATTTTGC-AAAAACAGAATCCGAATGCCAACGCCCAGCCGTTGATCCAGCCTCCATTGCAGGCCGC---SizeHit CountTotal NormTotal
No Reads
dp5
TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTTTTCTT-GATGAATAA-----TGAAA-TTTTTCAA-TAATATAGAATCCGAATGTCCCGGCCAAGCCCTTGATTCAACCGCCGGC------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTTTTCTT-GATGAATAA-----TGAAA-TTTTTCAA-TAATTTAGAATCCGAATGTCGCGGCCAAGCCCTTGATTCAACCGCCGGC------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droGri2
-CCTGAACTATGGTTTTTAGTAG----AACCGCCGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 06:07 AM