ID:

dsi_9590

 Coordinate:

3r:16248807-16248956 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.0 -34.0 -33.8

Flybase annnotation

CDS [3r_16248957_16249025_-]; exon [3r_16248957_16249103_-]; intron [3r_16248168_16248956_-]

Repeatable elements

NameClassFamilyStrand
(GA)nSimple_repeatSimple_repeat+
mature
  1. dsi_9590  3r:16248829-16248848 -
  2. x:2809021-2809040 -
  3. x:10590922-10590941 -
  4. x:13025190-13025209 -
star

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GAACTGGCGGCCCCCTGATCGAAGCCGTTAGGCCAGCGGCCGTGAAAAAGGTGAGTTCGCCAATTAGTGGTCATATTTGTGTGTAAAAAATGCGAAAATCCGTCGCTTTACATAATAAGGCGAAAAGAGAGATGTGCACACCTACGCTCTCCCTTTCTCTCTCTCTCTCTCTCTTACTCACACATGTGAAATGCTGATCGTTTATCGGTAAAAAAAAAACTGTAGCGCTAATTTAAGTTCTTTCCATTTG
**************************************************(((....)))..(((((((.((((((.((((.((((......((......))((((((((.....))))))))((((.((((.(((........))))))).)))).................)))).)))).))))))..)))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 SRR618934
dsim w501 ovaries
 O002
Head
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
............................................................................................................................................................................................AAATGCTGATCGTTTATCGGT......................................... 21 0 1 5.00 5 2 3 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TAAAAAAAAAACTGTAGCGCT..................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................AAATGCTGATCGTTTATCGG.......................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................AATGCTGATCGTTTATCGGT......................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TAAAAAAAAACTGTAGCGCT..................... 20 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TGAAATGCTGATCGTTTATC............................................ 20 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0
........................................................................................................................................................................................................................AAACTGTAGCGCTAATTTAAG............. 21 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................GAAATGCTGATCGTTTATCGG.......................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
....TGGCGGCCCCCTGATCGAAGCCGT.............................................................................................................................................................................................................................. 24 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
........GGCCCCCTGATCGAAGCC................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................AATGCTGATCGTTTATCGGG......................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AACTGTAGCGCTAATTTAAGT............ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................GTTAGGCCAGCGGCCGTGAAAAAG........................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................CTCTCTCTCTCTCTCTTACT........................................................................ 20 0 4 1.00 4 0 0 0 4 0 0 0 0 0 0
........GGCCCCCTGATCGAAGCCGTTAGGCCA....................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................AATGCTGATCGTTTATCGG.......................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................GAAGCCGTTAGGCCAGCGGCCGTG.............................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
....TGGCGGCCCCCTGATCGAAGCCGTT............................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
................GATCGAAGCCGTTAGG.......................................................................................................................................................................................................................... 16 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
GAACTGGCGGCCCCCTGGTCGAAGCC................................................................................................................................................................................................................................ 26 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0
..................TCGAAGCCGTTAGGCCAGCGGCCGT............................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................ATGTGAAATGCTGATCGTTTATCGGTA........................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................AATGCTGATCGTTTATCGGC......................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............TGATCGAAGCCGTTAGGCCAGCGT................................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................TCGAAGCCGTTAGGCCAGCGGCCGTGA............................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................AAAAAAAAAACTGTAGCGCT..................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................CCTACGCTCTCCCTTTCTCTC......................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.........GCCCCCTGATCGAAGCCG............................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................TGATAATGGTGAGTTCGGCA............................................................................................................................................................................................ 20 3 5 0.20 1 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................................ATCGGTAAAAAAAAA................................ 15 0 8 0.13 1 0 0 0 0 0 0 1 0 0 0
..................TCGAAACCGTTAGGC......................................................................................................................................................................................................................... 15 1 8 0.13 1 0 0 0 0 0 0 0 0 0 1
................GTTCGAATCCGTTAGGC......................................................................................................................................................................................................................... 17 2 8 0.13 1 0 0 0 0 0 0 0 0 1 0
...............GGTTCGAATCCGTTAGGC......................................................................................................................................................................................................................... 18 3 20 0.10 2 0 0 0 0 0 0 0 0 1 1
.......................................................................................................................................................................................................GTTTATAGGGAAAAAAAAA................................ 19 2 15 0.07 1 0 0 0 0 1 0 0 0 0 0
.......CGGCCCCCTGGACGAAGAC................................................................................................................................................................................................................................ 19 3 15 0.07 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TCGGTTATCGGAGAAAAAAAA................................ 21 3 16 0.06 1 0 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................TCCGTTATCAGTAAAAAAAAA................................ 21 3 17 0.06 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CTTGACCGCCGGGGGACTAGCTTCGGCAATCCGGTCGCCGGCACTTTTTCCACTCAAGCGGTTAATCACCAGTATAAACACACATTTTTTACGCTTTTAGGCAGCGAAATGTATTATTCCGCTTTTCTCTCTACACGTGTGGATGCGAGAGGGAAAGAGAGAGAGAGAGAGAGAATGAGTGTGTACACTTTACGACTAGCAAATAGCCATTTTTTTTTTGACATCGCGATTAAATTCAAGAAAGGTAAAC
**************************************************(((....)))..(((((((.((((((.((((.((((......((......))((((((((.....))))))))((((.((((.(((........))))))).)))).................)))).)))).))))))..)))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 O002
Head
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR902009
testis
.........CGGGGGACTAGCTTCGGC............................................................................................................................................................................................................................... 18 0 1 8.00 8 6 2 0 0 0 0 0
...............................................................................................................................................................................................................................TCGCGATTAAATTCAAGAAAG...... 21 0 1 5.00 5 5 0 0 0 0 0 0
.....................................................................................................................TCCGCTTTTCTCTCTACACGT................................................................................................................ 21 0 1 4.00 4 4 0 0 0 0 0 0
..............................................................................................TTTTAGGCAGCGAAATGTATT....................................................................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0
.........CGGGGGACTAGCTTCGGCAAT............................................................................................................................................................................................................................ 21 0 1 2.00 2 1 1 0 0 0 0 0
.................................................CCACTCAAGCGGTTAATCACC.................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................................................................................................CACGACTAGCAAATAGCCATT....................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................TAAATTCAAGAAAGGTAAA. 19 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................GCGCGATTAAATTCAAGAAAG...... 21 1 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................CCGCGATTAAATTCAAGAAAG...... 21 1 1 1.00 1 1 0 0 0 0 0 0
..............................................TTTCCACTCAAGCGGTTAATC....................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
..................................................................................................................TATTCCGCTTTTCTCTCTACAC.................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0
CTTGACAGCTGGGAGACTA....................................................................................................................................................................................................................................... 19 3 11 0.73 8 3 5 0 0 0 0 0
........................................................................................................................................................................................................AAATAGCCGTTTTTTTT................................. 17 1 10 0.20 2 0 0 0 2 0 0 0
...................................................................................................................ATTCCTCTTTTCTCT........................................................................................................................ 15 1 20 0.10 2 0 0 0 0 2 0 0
............................................................................................................................................................................GAATGAGAGTGTACCCATT........................................................... 19 3 11 0.09 1 0 0 0 1 0 0 0
.....................................................................................................AAGCGAAATGGATTATT.................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 1 0 0
.................................................................................................................................................................AGAGAGAGAGAGAAT.......................................................................... 15 0 20 0.05 1 0 0 0 0 0 1 0
.TTGGCTGCTGGGGGACTA....................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:16248757-16249006 - dsi_9590 GAACTGGCGGCCCCCTGATCGAAGCCGTTAGGCCAGCGGCCGTGAAAAAGGTGAGTT-CG----------CCAATTAGTGG----------TCATATTTGTGTG--T-A-AAAAATGC-GAAAATC--CGTCGCTTTACATAATAA-GGCGAA----------------------------------------------------AAGAGAGATGTGCACACCTAC------GCTCTCCCT--T--TCTCT----CTCTCTCTCTCTCTTACTCACACATGTG-AAATGC-----------------------------TGATCGTTTATCGGT-AAAA--AAAA-----------AACT----GTAGCGCTAATT------TAAGTTCT-TTCC----------------------------ATTTG
droSec2 scaffold_0:17114888-17115130 - GAACTGGCGGCCCCCTGATCGAAGCCGTTAGGCCAGCGGCCGTGAAAAAGGTGAGTT-CG----------CCAATTAGTGG----------TCATATTTGTGTG--T-A-AAAAATGC-GAAAATC--CGTCGCTTTACATAATAA-GGCGAA----------------------------------------------------AAGAGAGAGGTGAACACTTAC------GCTCTCTCT--T--T--------CTCTCTCTCTCTCTTACTCACACATGTG-AAATGC-----------------------------TGATCGTTTATCGGT-AAAA--AAAA--------------T----GTTGCGCTAATT------TAAGTTCT-TTCC----------------------------ATTTG
dm3 chr3R:4764561-4764808 + GAACTGGCGGCCCCCTGATCGAAACCGTTAGGCCAGCGGCCATAAAAAAGGTGAGTT-CG----------CCAATTAGTAG----------TCATATTTGTGTG--T-A-AAAAATGC-GAAAATC--CGTCGCTTTACATAATAA-GGCGAA----------------------------------------------------AAGAGAGAG-TGAACACCTAC------GCTGTCCCC--T--T--------CTCTGTCTCTCACTTACTCACACATGTG-AAATGC-----------------------------TGATCGTTTATCGGT-ACAAAAAAAA-----------AACT----TAAGCGATAATT------TAAGTTCTTTGCC----------------------------ATTTG
droEre2 scaffold_4770:16838923-16839177 - GAACTGGCGGCCCCCTTATCGAAACCGTTAGGCCAGCGGCCGTGAAAAAGGTGAGTT-CG----------CCAATTAGTGC----------TCATATTTGTGTG--T---AAAAATGC-AAAAATC--CGTTGCTTTACATAATAA-GGCGAA----------------------------------------------------AAGAGAGAGGTGAACCCCTAC------GCTCTCCCT--T--TCTCA----CTCTCTCTCTCTCTTACTCACACATGCG-AAATGCA----------------------------TGATCGTTTATCGGT-AAAA--AAAA----G-TCTTCAACT----ATCGCGCTAATT-------AAGTT-CCAGTA----------------------------AATTG
droYak3 3R:8808648-8808895 + GAACTGGCGGCCCCCTAATCGAAACCGTTAGGCCAGCGGCCGTGAAAAAGGTGAGTT-CG----------CCAATTAGTGG----------TCATTTGTGT--GT---A--AAAATGC-AAAAATC--CGTTGCTTTACATAATAA-GGCGAA----------------------------------------------------AAGAGAGAGGTGAACCCCTAC------GCTCTTCCT--T--T--------CTCACTCTCTCTCTTACTCACACATGCG-ATATGCA----------------------------CGATCGTTTATCGGT-AAAA--AAAAAAAAG-TGTTCAACT----ATCGCGCTAATT------TAAG-------TA----------------------------AATTG
droEug1 scf7180000409467:715610-715866 - GAACGGGCGGTCCCTTAATTGAAACCGTTAGGCCAGCGGCCATGAAAAAGGTAAGTC-CA----------CCAATTAAAGG----------TCATATTTTT--GTAAAAAAAAAATGC-AAAAATCACAGACGCTTTACATAATAA-GGCGAA----------------------------------------------------AAGAGAGCGGTGC--------TCTTTCACTCTCTCT--TGTGCTCCCCGTCTCTTTCTCTGTGCTACCCACACATGCG-AAATGC---------------------TTAAGTGATGATCGTTTATCGCT-AAAA--A-------------------------GTTCTAATT------TAAATTCCCTTTA----------------------------ATTTG
droBia1 scf7180000302402:7467769-7468016 + GAACGGGCGGTCCCCTAATCGAAACCGTCAGGCCAGCGGCCGTCAAAAAGGTGAGTT-TG----------CCAATTAAGGG----------TCGCACTTTT--CT---G-AGAAATGC-AAAAATC--CATCGCTTTACATAATAA-GGCGAA----------------------------------------------------AAGAGAGAGGTGC--------TCTCT------CTCC--A--C--------CTCTATCCCCGTCCCCTTCTCACATGGG-AAATAC---------------------GTTGGCGGTGATCGTTTATCGTC-CAAAAC----------AGTGCTATT----CCAGTGCTAATT------TAAATTCCCTTTG----------------------------ATTTT
droTak1 scf7180000414009:56700-56931 - GAACGGGCGGTCCCCTAATCGAAACCGTTAGGCCAGCGGCCGTGAAGAAGGTGAGTC-CA----------CCAATTAAAGG----------TCATATTTTT--GT-----AAAAATGC-AAAAATC--AGTCGCTTTACATAATAA-GGCGAA----------------------------------------------------AAGAGAGAGGTGC--------TCA--------CTCT--C--TCTAT----CGCTATCTCTGTCCTGCTCTCACATGGG-AAATAC---------------------GTTAGTGGAGATCGTTTATCGCT-A-------------------------------TTGCTAATT------TAAATTCCCTTTA----------------------------ATTTG
droEle1 scf7180000491212:1036390-1036645 - GAACGGGAGGTCCCCTTCTGGAAACAGTTAGGCCAGCGGCCGTTAAAAAGGTAAGTC-CG----------CCAATTAAAGG----------TCATATTTTT--GT---A-AAAAATGC-AAAAACC--AGACGCTTTACATAATAA-GGCGAA----------------------------------------------------AAGAGAGAGGTGT--------TCG--------CTCT--T--T--------CTCTCTCTCTGTCTTACTCACACATGGT-GAATGCACGATGGGATCG-CGGAGTGCGGGGGTGGAGATCGCTTATCGCT-AAAA--A----------------------------CTAATTTCGTTTTAAATTCCCTTTA----------------------------ATTTG
droRho1 scf7180000779210:37889-38158 - GAACGGGCGGTCCCCTACTGGAAACCGTTAGGCCAGCAGCCGTTAAAAAGGTACGTT-CA----------TCAATTAAAGG----------TCATATTTTT--GT---A-AAAAATGC-AAAAATC--AGACGCTTTACATAATAA-GGCGAA----------------------------------------------------AAGAGAGCGGTGC--------GCT----------CG--G--G--------CTCTCCTTCTCTCTTACTCACACATGGT-GAATGCACGATAGGATAG-GTGTGTGCGGGGGTGTCGATCGCTAATCGCT-AAAAAC----------TGTTCTACT----TAAGTGTTAATTACATTTTAAATTCCCTTTA----------------------------ATTTG
droFic1 scf7180000454106:2425425-2425686 - GAACGGGCGGTCCCCTTCTCGAAACTGTTAGGCCAGCGGCCGTGAAAAAGGTAAGTC-CA----------CCAATTTAAGG----------TCATATTTTC--GT---A-AAAAATGC-GAAAATC--AGTCGCTTTACATAATAA-GGCGAG----------------------------------------------------AAGAGAGAGGTGC--------T------------------------------CTCTTTCTCTCTCACTCACACATGGGGGAATTCAAAAGTTGATCGTCGGAGTACGGGGGTG-TGATCGCTTATCGCT-AAAAAC----------TGCTCCACT----CTAGTGCTAATTTCAGTT-TAACTCCATTTA----------------------------ATTTA
droKik1 scf7180000302639:1801839-1802111 - GTACGGGCGGTCCCCTACTCGATTCCGTTAGGCCGACGGCTGTCAAAAAGGTGAGTAGCTGT----------GGCAAAAGC----------TAATAAAAAT--GT------AATGTGCGAAAAATC--AGTCACTTTACATAATAA-GGCGAA----------------------------------------------------AAGAGAG--GTGCAG--CGAG------A----GCCC--A--TCTCT----CTCTCTCTCCCTCGT----TCTCATCGG-GA-GG---------------------CGGGGGTGGCGATCGCTT--CGCTTTGAAAC----------TGTTTTTTTCTCTTTGGTGCTAATT------T-----TCCATTTATTAAGCTGACGTTTTTTATACGCATTAAATTG
droAna3 scaffold_13340:3514610-3514898 + GTACGAGCGGTCCCATACTTGAATCCGTTAGGCCAGCGTCGGTTAAGAAGGTAAGTG-CCCGCAAATA--CCGTTTAAATG----------CCATTTTAGT--GT-------AAGTGC-AA-ATTC--AGTCACTTTACATAATAA-TGGCAAAAGCTACAGAGAGAGAGAGAGGGAGAGAATGGTGGAGAGATGGCAA--------------GGTGAAGTGCGGCTG------G--CTGC--C--T--------CTCTGTCGCTAGTTCAGGGACAGATCAG-TATTA-------------------GGCGGGGGTGGTGATCGTTACTTGG----AAAC----------TGTTCTATTC-CCAAGGTGCTA-----------AATTCGCATTA----------------------------A----
droBip1 scf7180000396712:838749-839043 - GTACGAGCGGTCCCATACTTGAATCCGTTAGGCCAGCGACGGTTAAGAAGGTAAGTG-CCAGCAAATATGCCGTTAAAATG----------CCATTTAAGT--GT-------AAGTGC-AA-ATTC--AGTCACTTTACATAATAA-TGGCAAAAGCTAGAGAGAGAGAGAGAGAGCGACAA------AGAGTTGGCAA--------------GGTGAAGTGCGGC------G-GCTGCCTTCT--T--------CTCTGTCGCTAGTTCAGGGACAGATCAG-TATGG---------------------CGGGGGTGGTGATCGTTATTTGGA-AACG-------------ATTCTATTC-CTTAGGTGCTA-----------AATTCGCATTAATTTT-----------------------GGTGA
dp5 2:22993320-22993451 - GAACCGGCGGACCACTAATCGAGTCCGTTAGACCCAAGACCGTTCAAAAGGTAGGTG-CAGTGCAGTATGG-ATTTATTTG----------CC--------ATT--T-AAGCAAATGC-AA-AATA--AGTCACTTTATATAATAATGGCAAA----------------------------------------------------AAGAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_3:5770081-5770212 - GAACCGGCGGACCACTAATCGAGTCCGTTAGACCCAAGACCGTTCAAAAGGTAGGTG-CAGTGCAGTATGG-ATTTATTTG----------CC--------ATT--T-AAGCAAATGC-AA-AATA--AGTCACTTTATATAATAATGGCAAA----------------------------------------------------AAGAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004902:6413434-6413488 + GCTCCAGTTGTTCATTAATCGAATCAGTTAAACCAAAAACAGTTACAAAGGTAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:2793228-2793321 + TT----------------------------------------------------------------------------------------------------------------------------------GCATTGCATGGAAA-CGTGGA----------------------------------------------------AAGTGAGACACAC--------TCTCTCTCTCTCTCT--C--TCTCT----CTCTCTCTCTCTCTCGCTCACAC---------TGC------------------------------TGACGCTTATCG------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:20218071-20218130 + GTGCAGGGGGTACTTTTGTTGAAACAATAAACCCCAAAACGGTGACAAAGGTAAGTG-TG----------C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15074:7550166-7550410 + GTGCAGGCGGCTGCCTCATCGAAACTGTGAAACCCGCGACTGTTGCAAAGGTGAGTC-TCGTGCAACGTTG-ACAAATGTGCAATTTTTCACCGTACTTTT--AC-----ATAATTGC-AA-TA-G--AGCAACTAAATCCAACAACAACATG------------------------------------------ACAAGGTTAAAACTATGCTATGC--------TCG--------CGCT--C--T--------CTCTCACTCTCTTT-----------------------------------------------------GCGGTGAGCGTC-AAAA--AGCTCAAAGCAG-CCAC------------CTGACT------TGCGGTCTTTTCG------------------------ATCAATTTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GAACTGGCGGCCCCCTGATCGAAGCCGTTAGGCCAGCGGCCGTGAAAAAGGTGAGTT-CG----------CCAATTAGTGG----------TCATATTTGTGTG--T-A-AAAAATGC-GAAAATC--CGTCGCTTTACATAATAA-GGCGAA----------------------------------------------------AAGAGAGATGTGCACACCTAC------GCTCTCCCT--T--TCTCT----CTCTCTCTCTCTCTTACTCACACATGTG-AAATGC-----------------------------TGATCGTTTATCGGT-AAAA--AAAA-----------AACT----GTAGCGCTAATT------TAAGTTCT-TTCC----------------------------ATTTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................AAATGC-----------------------------TGATCGTTTATCGGT-.............................................................................................2115.00523000000000000000
.............................................................................................................................................................................................................................................................................................................................................T-AAAA--AAAA-----------AACT----GTAGCGCT........................................................2113.00330000000000000000
............................................................................................................................................................................................................................................................................................AAATGC-----------------------------TGATCGTTTATCGG...............................................................................................2012.00220000000000000000
.............................................................................................................................................................................................................................................................................................AATGC-----------------------------TGATCGTTTATCGGT-.............................................................................................2012.00220000000000000000
.........................................................................................................................................................................................................................................................................................TG-AAATGC-----------------------------TGATCGTTTATC.................................................................................................2012.00200000200000000000
........................................................................................................................................................................................................................................................................................................................................................A-----------AACT----GTAGCGCTAATT------TAAG..........................................2112.00211000000000000000
..........................................................................................................................................................................................................................................................................................G-AAATGC-----------------------------TGATCGTTTATCGG...............................................................................................2112.00220000000000000000
....TGGCGGCCCCCTGATCGAAGCCGT................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000000002000000
........GGCCCCCTGATCGAAGCC..................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.............................................................................................................................................................................................................................................................................................AATGC-----------------------------TGATCGTTTATCGGG-.............................................................................................2011.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AACT----GTAGCGCTAATT------TAAGT.........................................2111.00110000000000000000
..........................GTTAGGCCAGCGGCCGTGAAAAAG..........................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
.........................................................................................................................................................................................................................................................CT----CTCTCTCTCTCTCTTACT...........................................................................................................................................................2041.00400000400000000000
........GGCCCCCTGATCGAAGCCGTTAGGCCA.........................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
.............................................................................................................................................................................................................................................................................................AATGC-----------------------------TGATCGTTTATCGG...............................................................................................1911.00110000000000000000
....................GAAGCCGTTAGGCCAGCGGCCGTG................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
....TGGCGGCCCCCTGATCGAAGCCGTT...............................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
................GATCGAAGCCGTTAGG............................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000001000000000
..................TCGAAGCCGTTAGGCCAGCGGCCGT.................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
......................................................................................................................................................................................................................................................................................ATGTG-AAATGC-----------------------------TGATCGTTTATCGGT-A............................................................................................2711.00101000000000000000
.............................................................................................................................................................................................................................................................................................AATGC-----------------------------TGATCGTTTATCGGC-.............................................................................................2011.00101000000000000000
...............TGATCGAAGCCGTTAGGCCAGCGT.....................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
..................TCGAAGCCGTTAGGCCAGCGGCCGTGA...............................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................AAAA--AAAA-----------AACT----GTAGCGCT........................................................2011.00101000000000000000
.............................................................................................................................................................................................................................CCTAC------GCTCTCCCT--T--TCTCT----C............................................................................................................................................................................2111.00100000100000000000
.........GCCCCCTGATCGAAGCCG.................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................ATCGGT-AAAA--AAAA-----------A.......................................................................1580.13100000010000000000
droSec2
GAACTGGCGGCCCCCTGATCGAAGCCGTTAGGCCAGCGGCCGTGAAAAAGGTGAGTT-CG----------CCAATTAGTGG----------TCATATTTGTGTG--T-A-AAAAATGC-GAAAATC--CGTCGCTTTACATAATAA-GGCGAA----------------------------------------------------AAGAGAGAGGTGAACACTTAC------GCTCTCTCT--T--T--------CTCTCTCTCTCTCTTACTCACACATGTG-AAATGC-----------------------------TGATCGTTTATCGGT-AAAA--AAAA--------------T----GTTGCGCTAATT------TAAGTTCT-TTCC----------------------------ATTTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..ACTGGCGGCCCCCTGATCGAAGCCGT................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
...................................................TGAGTT-CG----------CCAATTAGTGG----------TCT..............................................................................................................................................................................................................................................................................................................................................2211.0010001
............................................................................AGTGG----------TCATATTTGTGTG--T-A-AA............................................................................................................................................................................................................................................................................................................................2211.0010100
...................CGAAGCCGTTAGGCCAGCGGC....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.AACTGGCGGCCCCCTGATCG.......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
...CTGGCGGCCCCCTGATCGAAGCC..................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
...................................................TGAGTT-CG----------CCAATTAGTGG----------TC...............................................................................................................................................................................................................................................................................................................................................2111.0010001
..........................................................................................................................................CATAATAA-GGCGAA----------------------------------------------------AAGAGAG........................................................................................................................................................................................................................2111.0010001
.................................................................................................................................................................................................................................................................................CACACATGTG-AAATGC-----------------------------TGATC........................................................................................................2111.0010100
........................................................................................................................................................................................................................................................................................GTG-AAATGC-----------------------------TGATCGTTTATCGGT-C............................................................................................2511.0010010
..........................................................................................................................................................................................................................................................................................G-AAATGC-----------------------------TGATCGTTTATCGG...............................................................................................2111.0010001
.AACTGGCGGCCCCCTGATCGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
............................................................................................................................................................................................................................................................................................AAATGC-----------------------------TGATCGTTTATCGGT-.............................................................................................2111.0010001
................................................................................................................................................AA-GGCGAA----------------------------------------------------AAGAGAGAGGTGA..................................................................................................................................................................................................................2111.0010001
....................................................................................................................................................GCGAA----------------------------------------------------AAGAGAGAGGTGAACACT.............................................................................................................................................................................................................2311.0010100
............CCCTGATCGAAGCCGTTAGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
.........................................GTGAAAAAGGTGAGTT-CG----------CC....................................................................................................................................................................................................................................................................................................................................................................2011.0011000
............................................................................................................................................................................................................................................................................................AAATGC-----------------------------TGATCGTTTATCGG...............................................................................................2011.0010001
..........................GTTAGGCCAGCGGCCGTGAAA.............................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.............................................................................................................................................................................................................................................................................................AATGC-----------------------------TGATCGTTTATCGG...............................................................................................1911.0010001
........GGCCCCCTGATCGAAGCC..................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
..................................................GTGAGTT-CG----------CCAATTAGTGG----------T................................................................................................................................................................................................................................................................................................................................................2111.0011000
GAACTGGCGGCCCCCTGATCGAAGCCG.................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
................................................................................................................................................................................................................................AC------GCTCTCTCT--T--T--------CTCTCTCT.....................................................................................................................................................................2111.0011000
dm3
GAACTGGCGGCCCCCTGATCGAAACCGTTAGGCCAGCGGCCATAAAAAAGGTGAGTT-CG----------CCAATTAGTAG----------TCATATTTGTGTG--T-A-AAAAATGC-GAAAATC--CGTCGCTTTACATAATAA-GGCGAA----------------------------------------------------AAGAGAGAG-TGAACACCTAC------GCTGTCCCC--T--T--------CTCTGTCTCTCACTTACTCACACATGTG-AAATGC-----------------------------TGATCGTTTATCGGT-ACAAAAAAAA-----------AACT----TAAGCGATAATT------TAAGTTCTTTGCC----------------------------ATTTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
GAACTGGCGGCCCCCTGATCGAAAC...................................................................................................................................................................................................................................................................................................................................................................................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007
........GGCCCCCTGATCGAAACC..................................................................................................................................................................................................................................................................................................................................................................................................................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TGAGTT-CG----------CCAATTAGTAG----------TC...............................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300011000000
..............CTGATCGAAACCGTTAGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................A-GGCGAA----------------------------------------------------AAGAGAGAG-TG...................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................AAATGC-----------------------------TGATCGTTTATCGGT-.............................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000200000000000
................................................AGGTGAGTT-CG----------CCAATTAG..............................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................TTAGTAG----------TCATATTTGTGTG--T-................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000
............................................................................................................A-AAAAATGC-GAAAATC--CGTCG.......................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000001100000000000
................................CCAGCGGCCATAAAAAAG..........................................................................................................................................................................................................................................................................................................................................................................................1822.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TAGTAG----------TCATATTTGTGTG--T-A-..............................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............CTGATCGAAACCGTTAGGCCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TGTG-AAATGC-----------------------------TGATCGTTTAT..................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000000
.AACTGGCGGCCCCCTGATC........................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGATCGAAACCGTTAGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................AATTAGTAG----------TCATATTTGTGT.....................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000
.............................................................................................................................................................................................................................CCTAC------GCTGTCCCC--T--T--------CTCTG........................................................................................................................................................................2112.0020000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................ATAA-GGCGAA----------------------------------------------------AAGAGAGAG-TG...................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000
...............................................................................................................................................TAA-GGCGAA----------------------------------------------------AAGAGAGAG-TGA..................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000
...............TGATCGAAACCGTTAGGCCA.........................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TCGAAACCGTTAGGCCAGCGGCCAT.................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................G-AAATGC-----------------------------TGATCGTTTATCGG...............................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................CGGT-ACAAAAAAAA-----------AACT----................................................................1821.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GATCGAAACCGTTAGGCCAG........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TGGCGGCCCCCTGATCGA......................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CCAGCGGCCATAAAAAAGGTG.......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....................GAAACCGTTAGGCCAGCGGCCATAAAAA............................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................GTG--T-A-AAAAATGC-GAAAATC--CG..........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
GAACTGGCGGCCCCCTGATC........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CGAAACCGTTAGGCCAGCGGCCATAAA..............................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............CCCTGATCGAAACCGTTAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CCTGATCGAAACCGTTAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................TTAGTAG----------TCATATTTGTGTG--T-A-..............................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....GGCGGCCCCCTGATCGAAACCGT................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................AAATGC-----------------------------TGATCGTTTATCGGT-T............................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
............CCCTGATCGAAACCGTTA..............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GTTAGGCCAGCGGCCATAAA..............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CCTGATCGAAACCGTTAGGCCAGCGGC....................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ACTGGCGGCCCCCTGATCGAAACCGTT...............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................................................................................................................................................................................GAGAG-TGAACACCTAC------GCT.................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTT-CG----------CCAATTAGTAG----------TC...............................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................ATCGAAACCGTTAGGCCAGCG......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............CCCTGATCGAAACCGTTAGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................AAATGC-----------------------------TGATCGTTTATCGG...............................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..........................GTTAGGCCAGCGGCCATAAAAA............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GGCCCCCTGATCGAAACCG.................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................G-AAATGC-----------------------------TGATCGTTTATCGGA-.............................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................ATGTG-AAATGC-----------------------------TGATCGTT.....................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.........................................................................................................................................ACATAATAA-GGCGAA----------------------------------------------------AAGAGA.........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
............................TAGGCCAGCGGCCATAAAAA............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CCATAAAAAAGGTGAGTT-CG----------C.....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TCGAAACCGTTAGGCCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................AACACCTAC------GCTGTCCCC--T--T--------C............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GGCGGCCCCCTGATCGAAAC...................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GATCGAAACCGTTAGGCCAGCGGCC...................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GCGGCCCCCTGATCGAAACC..................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GTTAGGCCAGCGGCCATAAAA.............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GAAACCGTTAGGCCAGCGGCC...................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................CGTTAGGCCAGCGGCCATAAAA.............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................AGAGAG-TGAACACCTAC------GCTG................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................................GCCATAAAAAAGGTGAGT....................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GGCCATAAAAAAGGTGAG.....................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CGAAACCGTTAGGCCAGCGGCC...................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................GAAAATC--CGTCGCTTTACATA..............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..ACTGGCGGCCCCCTGATCGA......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TCGAAACCGTTAGGCCAGCGG.....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
....................GAAACCGTTAGGCCAGCGG.....................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........................................................................................TCATATTTGTGTG--T-A-AAAA..........................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AACTGGCGGCCCCCTGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CCTGATCGAAACCGTTAGGCCA.........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TATCGGT-ACAAAAAAAA-----------AACT----................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...............................................................................................................................................................................................................................................................CTCTGTCTCTCACTTACTCAC........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...............................................................................................................................................................................................................GAGAGAG-TGAACACCTAC------GCTT................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...CTGGCGGCCCCCTGATCGAAAC...................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CCTGATCGAAACCGTTAGGCCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................CCC--T--T--------CTCTGTCTCTCACTTA.............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CCTGATCGAAACCGTTAGG............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....................GAAACCGTTAGGCCAGCGGCCATA................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GATCGAAACCGTTAGGCCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................TTTACATAATAA-GGCGAA----------------------------------------------------AAG............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
..ACTGGCGGCCCCCTGATCGAAACCGT................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CCCCTGATCGAAACCGTTAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CGAAACCGTTAGGCCAGCGGCCAT.................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GAAACCGTTAGGCCAGCGGCCATAAAAAA...........................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................ATGTG-AAATGC-----------------------------TGATCGTTTAT..................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AACTGGCGGCCCCCTGATCGA......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CTGGCGGCCCCCTGATCGA......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................ATT------TAAGTTCTTTGCC----------------------------ATTTG2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
....................................................................................................................................................................................................................AG-TGAACACCTAC------GCTGTCC.............................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................CACCTAC------GCTGTCCCC--T--T--------CTC..........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AACCGTTAGGCCAGCGGCCATAAA..............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GGCCCCCTGATCGAAACCGTT...............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GGCGGCCCCCTGATCGAAACC..................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................GAA----------------------------------------------------AAGAGAGAG-TGAACAC..............................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................CT----TAAGCGATAATT------TAAGTTC.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CCCCTGATCGAAACCGTTAGGCCA.........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CGGCCATAAAAAAGGTGAGTT-CG----------C.....................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ACTGGCGGCCCCCTGATCG.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................ATAATAA-GGCGAA----------------------------------------------------AAGAGAGA.......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................ATGTG-AAATGC-----------------------------TGATCGTTT....................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................................................ATAA-GGCGAA----------------------------------------------------AAGAGAGT.......................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
...............................................AAGGTGAGTT-CG----------CCAATGC...............................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CAGCGGCCATAAAAAAGA.........................................................................................................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................ATAATAA-GGCGAA----------------------------------------------------AAGATTC........................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................AAAAAAA-----------AACT----TAAGCGA.........................................................18110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GAACTGGCGGCCCCCTTATCGAAACCGTTAGGCCAGCGGCCGTGAAAAAGGTGAGTT-CG----------CCAATTAGTGC----------TCATATTTGTGTG--T---AAAAATGC-AAAAATC--CGTTGCTTTACATAATAA-GGCGAA----------------------------------------------------AAGAGAGAGGTGAACCCCTAC------GCTCTCCCT--T--TCTCA----CTCTCTCTCTCTCTTACTCACACATGCG-AAATGCA----------------------------TGATCGTTTATCGGT-AAAA--AAAA----G-TCTTCAACT----ATCGCGCTAATT-------AAGTT-CCAGTA----------------------------AATTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................AATTAGTGC----------TCATATTTGTGT.....................................................................................................................................................................................................................................................................................................................................2111.0011000000
..................TCGAAACCGTTAGGCCAGCGGCCGTGA...............................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
.................ATCGAAACCGTTAGGCCAG........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.................................CAGCGGCCGTGAAAAAGGTGA......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.............................AGGCCAGCGGCCGTGAAAAA...........................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
.....................AAACCGTTAGGCCAGCGGCCGTGA...............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
..........................................................................TTAGTGC----------TCATATTTGTGTG--T---..............................................................................................................................................................................................................................................................................................................................2111.0010000100
.....GGCGGCCCCCTTATCGAAACC..................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
...............................................................................................................................................TAA-GGCGAA----------------------------------------------------AAGAGAGAGGTG...................................................................................................................................................................................................................2111.0011000000
..............................................................................................................................................................................................................................................................................................ATGCA----------------------------TGATCGTTTATCGGT-A............................................................................................2111.0010000100
................TATCGAAACCGTTAGGCCAGCGGCC...................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
..........................GTTAGGCCAGCGGCCGTGAAAAAGA.........................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
......................AACCGTTAGGCCAGCGGCCGTGAAAAA...........................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
........GGCCCCCTTATCGAAACC..................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
..............CTTATCGAAACCGTTAGGCCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
......................AACCGTTAGGCCAGCGGCCGTGA...............................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
droYak3
GAACTGGCGGCCCCCTAATCGAAACCGTTAGGCCAGCGGCCGTGAAAAAGGTGAGTT-CG----------CCAATTAGTGG----------TCATTTGTGT--GT---A--AAAATGC-AAAAATC--CGTTGCTTTACATAATAA-GGCGAA----------------------------------------------------AAGAGAGAGGTGAACCCCTAC------GCTCTTCCT--T--T--------CTCACTCTCTCTCTTACTCACACATGCG-ATATGCA----------------------------CGATCGTTTATCGGT-AAAA--AAAAAAAAG-TGTTCAACT----ATCGCGCTAATT------TAAG-------TA----------------------------AATTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................GAAACCGTTAGGCCAGCGGCCGTGAAAA............................................................................................................................................................................................................................................................................................................................................................................................2812.00200000020000
.......................ACCGTTAGGCCAGCGGCCGTGAAAAAG..........................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
......................AACCGTTAGGCCAGCGGCCGTGAAAAAG..........................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
........................CCGTTAGGCCAGCGGCCGTGAAAA............................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..................TCGAAACCGTTAGGCCAGCGGCCGTG................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
GAACTGGCGGCCCCCTAATCGAAAC...................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
........................CCGTTAGGCCAGCGGCCGTGAA..............................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
..................TCGAAACCGTTAGGCCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
................AATCGAAACCGTTAGGCCAGCGGC....................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
................AATCGAAACCGTTAGGCCAGCGGCC...................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
........GGCCCCCTAATCGAAACC..................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
.......................ACCGTTAGGCCAGCGGCCGTGA...............................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000
droEug1
GAACGGGCGGTCCCTTAATTGAAACCGTTAGGCCAGCGGCCATGAAAAAGGTAAGTC-CA----------CCAATTAAAGG----------TCATATTTTT--GTAAAAAAAAAATGC-AAAAATCACAGACGCTTTACATAATAA-GGCGAA----------------------------------------------------AAGAGAGCGGTGC--------TCTTTCACTCTCTCT--TGTGCTCCCCGTCTCTTTCTCTGTGCTACCCACACATGCG-AAATGC---------------------TTAAGTGATGATCGTTTATCGCT-AAAA--A-------------------------GTTCTAATT------TAAATTCCCTTTA----------------------------ATTTGSizeHit CountTotal NormTotal
No Reads
droBia1
GAACGGGCGGTCCCCTAATCGAAACCGTCAGGCCAGCGGCCGTCAAAAAGGTGAGTT-TG----------CCAATTAAGGG----------TCGCACTTTT--CT---G-AGAAATGC-AAAAATC--CATCGCTTTACATAATAA-GGCGAA----------------------------------------------------AAGAGAGAGGTGC--------TCTCT------CTCC--A--C--------CTCTATCCCCGTCCCCTTCTCACATGGG-AAATAC---------------------GTTGGCGGTGATCGTTTATCGTC-CAAAAC----------AGTGCTATT----CCAGTGCTAATT------TAAATTCCCTTTG----------------------------ATTTTSizeHit CountTotal NormTotal
No Reads
droTak1
GAACGGGCGGTCCCCTAATCGAAACCGTTAGGCCAGCGGCCGTGAAGAAGGTGAGTC-CA----------CCAATTAAAGG----------TCATATTTTT--GT-----AAAAATGC-AAAAATC--AGTCGCTTTACATAATAA-GGCGAA----------------------------------------------------AAGAGAGAGGTGC--------TCA--------CTCT--C--TCTAT----CGCTATCTCTGTCCTGCTCTCACATGGG-AAATAC---------------------GTTAGTGGAGATCGTTTATCGCT-A-------------------------------TTGCTAATT------TAAATTCCCTTTA----------------------------ATTTGSizeHit CountTotal NormTotal
No Reads
droEle1
GAACGGGAGGTCCCCTTCTGGAAACAGTTAGGCCAGCGGCCGTTAAAAAGGTAAGTC-CG----------CCAATTAAAGG----------TCATATTTTT--GT---A-AAAAATGC-AAAAACC--AGACGCTTTACATAATAA-GGCGAA----------------------------------------------------AAGAGAGAGGTGT--------TCG--------CTCT--T--T--------CTCTCTCTCTGTCTTACTCACACATGGT-GAATGCACGATGGGATCG-CGGAGTGCGGGGGTGGAGATCGCTTATCGCT-AAAA--A----------------------------CTAATTTCGTTTTAAATTCCCTTTA----------------------------ATTTGSizeHit CountTotal NormTotal
No Reads
droRho1
GAACGGGCGGTCCCCTACTGGAAACCGTTAGGCCAGCAGCCGTTAAAAAGGTACGTT-CA----------TCAATTAAAGG----------TCATATTTTT--GT---A-AAAAATGC-AAAAATC--AGACGCTTTACATAATAA-GGCGAA----------------------------------------------------AAGAGAGCGGTGC--------GCT----------CG--G--G--------CTCTCCTTCTCTCTTACTCACACATGGT-GAATGCACGATAGGATAG-GTGTGTGCGGGGGTGTCGATCGCTAATCGCT-AAAAAC----------TGTTCTACT----TAAGTGTTAATTACATTTTAAATTCCCTTTA----------------------------ATTTGSizeHit CountTotal NormTotal
No Reads
droFic1
GAACGGGCGGTCCCCTTCTCGAAACTGTTAGGCCAGCGGCCGTGAAAAAGGTAAGTC-CA----------CCAATTTAAGG----------TCATATTTTC--GT---A-AAAAATGC-GAAAATC--AGTCGCTTTACATAATAA-GGCGAG----------------------------------------------------AAGAGAGAGGTGC--------T------------------------------CTCTTTCTCTCTCACTCACACATGGGGGAATTCAAAAGTTGATCGTCGGAGTACGGGGGTG-TGATCGCTTATCGCT-AAAAAC----------TGCTCCACT----CTAGTGCTAATTTCAGTT-TAACTCCATTTA----------------------------ATTTASizeHit CountTotal NormTotal
No Reads
droKik1
GTACGGGCGGTCCCCTACTCGATTCCGTTAGGCCGACGGCTGTCAAAAAGGTGAGTAGCTGT----------GGCAAAAGC----------TAATAAAAAT--GT------AATGTGCGAAAAATC--AGTCACTTTACATAATAA-GGCGAA----------------------------------------------------AAGAGAG--GTGCAG--CGAG------A----GCCC--A--TCTCT----CTCTCTCTCCCTCGT----TCTCATCGG-GA-GG---------------------CGGGGGTGGCGATCGCTT--CGCTTTGAAAC----------TGTTTTTTTCTCTTTGGTGCTAATT------T-----TCCATTTATTAAGCTGACGTTTTTTATACGCATTAAATTGSizeHit CountTotal NormTotal
No Reads
droAna3
GTACGAGCGGTCCCATACTTGAATCCGTTAGGCCAGCGTCGGTTAAGAAGGTAAGTG-CCCGCAAATA--CCGTTTAAATG----------CCATTTTAGT--GT-------AAGTGC-AA-ATTC--AGTCACTTTACATAATAA-TGGCAAAAGCTACAGAGAGAGAGAGAGGGAGAGAATGGTGGAGAGATGGCAA--------------GGTGAAGTGCGGCTG------G--CTGC--C--T--------CTCTGTCGCTAGTTCAGGGACAGATCAG-TATTA-------------------GGCGGGGGTGGTGATCGTTACTTGG----AAAC----------TGTTCTATTC-CCAAGGTGCTA-----------AATTCGCATTA----------------------------A----SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................TGAATCCGTTAGGCCAGCGTCGGTTAAG.............................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
................ACTTGAATCCGTTAGGCCA.........................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...............................................................................................................................................................................................................................................GC--C--T--------CTCTGTCGCTAGTT...............................................................................................................................................................1811.001010000
........GGTCCCATACTTGAATCCGT................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.................CTTGAATCCGTTAGGCCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
.............................AGGCCAGCGTCGGTTAAGAA...........................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...................TGAATCCGTTAGGCCAGCGTC....................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..............ATACTTGAATCCGTTAGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
..................TTGAATCCGTTAGGCCAGCGTCGGT.................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
......................ATCCGTTAGGCCAGCGTCGGTTAA..............................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.....................AATCCGTTAGGCCAGCGTC....................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
......................................................................................................................................................................................................................................................................................ATCAG-TATTA-------------------GGCGGGGGTT..............................................................................................................2011.001100000
..................TTGAATCCGTTAGGCCAGCGTC....................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
............................TAGGCCAGCGTCGGTTAAGA............................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..................TTGAATCCGTTAGGCCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
....................GAATCCGTTAGGCCAGCGT.....................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
..........................GTTAGGCCAGCGTCGGTTAAG.............................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
.............................AGGCCAGCGTCGGTTAAGA............................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
....................GAATCCGTTAGGCCAGCGTCGGTTAA..............................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
......................ATCCGTTAGGCCAGCGTCGGT.................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
................................................................................................................................................................................................................................................................................................A-------------------GGCGGGGGTGGTGATCGTTACTT.................................................................................................2411.001100000
.....................AATCCGTTAGGCCAGCGTCGGTTA...............................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
........GGTCCCATACTTGAATCCGTTAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..........................GTTAGGCCAGCGTCGGTTAA..............................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
............................................................................................................................................................................................................................TGCGGCTG------G--CTGC--C--T--------CTCTGTT......................................................................................................................................................................2211.001100000
................................................................................................................................................................AGAGAGAGAGAGAGGGAGA.........................................................................................................................................................................................................................................................19200.051100000
droBip1
GTACGAGCGGTCCCATACTTGAATCCGTTAGGCCAGCGACGGTTAAGAAGGTAAGTG-CCAGCAAATATGCCGTTAAAATG----------CCATTTAAGT--GT-------AAGTGC-AA-ATTC--AGTCACTTTACATAATAA-TGGCAAAAGCTAGAGAGAGAGAGAGAGAGCGACAA------AGAGTTGGCAA--------------GGTGAAGTGCGGC------G-GCTGCCTTCT--T--------CTCTGTCGCTAGTTCAGGGACAGATCAG-TATGG---------------------CGGGGGTGGTGATCGTTATTTGGA-AACG-------------ATTCTATTC-CTTAGGTGCTA-----------AATTCGCATTAATTTT-----------------------GGTGASizeHit CountTotal NormTotal
No Reads
dp5
GAACCGGCGGACCACTAATCGAGTCCGTTAGACCCAAGACCGTTCAAAAGGTAGGTG-CAGTGCAGTATGG-ATTTATTTG----------CC--------ATT--T-AAGCAAATGC-AA-AATA--AGTCACTTTATATAATAATGGCAAA----------------------------------------------------AAGAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............ACTAATCGAGTCCGTTAGACC..........................................................................................................................................................................................................................................................................................................................................................................................................2112.0020101000000
................AATCGAGTCCGTTAGACCCAAG......................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000002
..............CTAATCGAGTCCGTTAGACCC.........................................................................................................................................................................................................................................................................................................................................................................................................2112.0020101000000
.................ATCGAGTCCGTTAGACCCA........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
....................................................AGGTG-CAGTGCAGTATGG-ATT.................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................GAGTCCGTTAGACCCAAGACCGTTCA..............................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..ACCGGCGGACCACTAATCGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................TCGAGTCCGTTAGACCCAAGACC...................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
........................................CGTTCAAAAGGTAGGTG-CAGT..............................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........ACCACTAATCGAGTCCGTTAGACC..........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100000
.....................AGTCCGTTAGACCCAAGACCGT.................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.....................AGTCCGTTAGACCCAAGACCG..................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
......................GTCCGTTAGACCCAAGACCGTTCA..............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010000
................AATCGAGTCCGTTAGACCCAAGACC...................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
............................................CAAAAGGTAGGTG-CAGTGCAG..........................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........CCACTAATCGAGTCCGTTAGACCC.........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
....CGGCGGACCACTAATCGA......................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010000000
..............CTAATCGAGTCCGTTAGACCCAA.......................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...............TAATCGAGTCCGTTAGACCCAAGACC...................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
....................................AGACCGTTCAAAAGGTAGGT....................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
..........................GTTAGACCCAAGACCGTTCAAAA...........................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
droPer2
GAACCGGCGGACCACTAATCGAGTCCGTTAGACCCAAGACCGTTCAAAAGGTAGGTG-CAGTGCAGTATGG-ATTTATTTG----------CC--------ATT--T-AAGCAAATGC-AA-AATA--AGTCACTTTATATAATAATGGCAAA----------------------------------------------------AAGAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....CGGCGGACCACTAATCGAGTC...................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
GAACCGGCGGACCACTAATCGA......................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...................CGAGTCCGTTAGACCCAAGACC...................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
..............CTAATCGAGTCCGTTAGACCCAAGA.....................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..............CTAATCGAGTCCGTTAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.........GACCACTAATCGAGTCCGTTAGACCCAA.......................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
............CACTAATCGAGTCCGTTAGACCCAAGAC....................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
droWil2
GCTCCAGTTGTTCATTAATCGAATCAGTTAAACCAAAAACAGTTACAAAGGTAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............TTAATCGAATCAGTTAAACC..........................................................................................................................................................................................................................................................................................................................................................................................................2012.00211000
................AATCGAATCAGTTAAACCAAAAACA...................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
........TGTTCATTAATCGAATCAGTT...............................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
......................ATCAGTTAAACCAAAAACAG..................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
....CAGTTGTTCATTAATCGAATC...................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
............CATTAATCGAATCAGTTAAACC..........................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
droVir3
TT----------------------------------------------------------------------------------------------------------------------------------GCATTGCATGGAAA-CGTGGA----------------------------------------------------AAGTGAGACACAC--------TCTCTCTCTCTCTCT--C--TCTCT----CTCTCTCTCTCTCTCGCTCACAC---------TGC------------------------------TGACGCTTATCG------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................C--TCTCT----CTCTCTCTCTCTCTCG.............................................................................................................................................................22200.051000000000000000000000000000000000000100000000000000000000000000
droMoj3
GTGCAGGGGGTACTTTTGTTGAAACAATAAACCCCAAAACGGTGACAAAGGTAAGTG-TG----------C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........GTACTTTTGTTGAAACAATA...............................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..............TTTGTTGAAACAATAAACCCC.........................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
GTGCAGGCGGCTGCCTCATCGAAACTGTGAAACCCGCGACTGTTGCAAAGGTGAGTC-TCGTGCAACGTTG-ACAAATGTGCAATTTTTCACCGTACTTTT--AC-----ATAATTGC-AA-TA-G--AGCAACTAAATCCAACAACAACATG------------------------------------------ACAAGGTTAAAACTATGCTATGC--------TCG--------CGCT--C--T--------CTCTCACTCTCTTT-----------------------------------------------------GCGGTGAGCGTC-AAAA--AGCTCAAAGCAG-CCAC------------CTGACT------TGCGGTCTTTTCG------------------------ATCAATTTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................GTGAAACCCGCGACTGTT................................................................................................................................................................................................................................................................................................................................................................................................1812.00220
.......................................CTGTTGCAAAGGTGAGTC-TCG...............................................................................................................................................................................................................................................................................................................................................................................2111.00101

Generated: 05/19/2015 at 12:04 AM