ID:

dsi_9575

 Coordinate:

3r:24982963-24983092 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [3r_24983093_24983146_-]; CDS [3r_24983093_24983143_-]; CDS [3r_24982252_24982962_-]; exon [3r_24982029_24982962_-]; intron [3r_24982963_24983092_-]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------##################################################
TGGCGCGTGTTTTGGTTGGAGTTAAGCGTGTGATCGACTACGCCGTCAAGGTGAGCTTGAAAAGTCGCCTGTTGCGCATCTTGTCCCATCTATTTTTTATCACTTGTTGCGCTCCGTTTTGCGTAATCGTCTTAATTAAGCGGCAATTAAACTAATTCCGATTATTTTTCCCATGTCCAGGTGCGCGTCAAGCCCGACAAGACCGGCGTGGTCACCCAGGGCGTGAAGCA
**************************************************.((.((..((((((((((.....)))................((..(((..((..(((((((........))))))).))..)))..)).(((.(((((...))))))))...)))))))....)).)).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M024
male body		 GSM343915
embryo
 M025
embryo
 O002
Head
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
....................GTTAAGCGTGTGATCGACT............................................................................................................................................................................................... 19 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0
............TGGTTGGAGTTAAGCGTGTGATCGAC................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
........GTTTTGGTTGGACTTAAGCGG......................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................CCGGCGTGGTCACCCAGGGCGTGAAG.. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................GGAGTTAAGCGTGTGATCGACTACGC........................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGACCGGCGTGGTCACCCAGGGC........ 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................CGCGTCAAGCCCGACAAGACC.......................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................AGCGTGTGATCGACTACGCCGTC....................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................GTTAAGCGTGTGATCGAC................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............TGGTTGGAGTTAAGCGTGTGATCGACA............................................................................................................................................................................................... 27 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0
.............................GTGATCGACTACGCCGTCAAGGG.................................................................................................................................................................................. 23 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...........................GTGTGATCGACTACGCCGTCAAGGTG................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................GTGTGATCGACTACGCCGT........................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................TGGAGTTAAGCGTGTGATCGACTACGCC.......................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................CGCGTCAAGCCCGACAAGACCGGCGTG.................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................................................GTTGGAAAAGTCGCCTGTTGC........................................................................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........TTTTGGTTGGAGTTAAGCGTGTG...................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGGTCACCCAGGGCGTGAAGC. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................AGCCCGACAAGACCGGCGTGGT.................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........TTGGTTGGAGTTAAGCGTGTGATCGA................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................................GGTGAGCTTGAACAGTGG................................................................................................................................................................... 18 2 5 0.40 2 0 0 0 0 0 0 0 0 2 0
.................................TCGACTTCGCCGTCGAGGT.................................................................................................................................................................................. 19 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................GCGTGGTGAACCAGGCCGTGA.... 21 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................TTAATTAAGCGGCTAATAA................................................................................ 19 2 8 0.13 1 0 1 0 0 0 0 0 0 0 0
.............................................................AAGTCGCCTCTCGCGCA........................................................................................................................................................ 17 2 9 0.11 1 0 0 0 0 0 0 0 0 0 1
.....................................................................................................................................................................................................................ACCCCGGCCGTGAAGCA 17 2 9 0.11 1 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................................AGGTGCGCGCCAGGCCCCA................................. 19 3 18 0.06 1 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................ACCGGCGTGGTCACGG............. 16 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

ACCGCGCACAAAACCAACCTCAATTCGCACACTAGCTGATGCGGCAGTTCCACTCGAACTTTTCAGCGGACAACGCGTAGAACAGGGTAGATAAAAAATAGTGAACAACGCGAGGCAAAACGCATTAGCAGAATTAATTCGCCGTTAATTTGATTAAGGCTAATAAAAAGGGTACAGGTCCACGCGCAGTTCGGGCTGTTCTGGCCGCACCAGTGGGTCCCGCACTTCGT
**************************************************.((.((..((((((((((.....)))................((..(((..((..(((((((........))))))).))..)))..)).(((.(((((...))))))))...)))))))....)).)).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M024
male body		 M025
embryo
 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
.............CCAACCTCAATTCGCACACTAGCTGATG............................................................................................................................................................................................. 28 0 1 2.00 2 0 0 2 0 0 0 0 0
............................................................................................................................................................................AACAGGTCCGCGCGCAGTTCG..................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................AAGAACAGGGTAGATAAAAAATAGTGA.............................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................TCAGGTCCACGCGCAGTTCGG.................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................TTCGGGCTGTTCTGGCCGCAC.................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0
..............................................................................................................................................CGTTAATTTGATTAAGGCTAA................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................AGGTCCACGCGCAGTTCGGGCT................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0
......................................................................................................................................................................................TGCGCAGTTCGGGCTGTTCTGG.......................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................AAATAGTGAAGAAGGCGAGGTA................................................................................................................. 22 3 1 1.00 1 0 0 0 0 0 0 1 0
......................................ATGCGGCAATCCCACTCG.............................................................................................................................................................................. 18 2 1 1.00 1 0 0 0 0 1 0 0 0
.................................................................................................................................................................................TTCCACGCGCAGTTCGGGCTGT............................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0
.....................................GATGCGGCAGTTCCACTCGAACTTTT....................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................GGCCGTTCTGGCCGCACC................... 18 1 2 0.50 1 0 0 0 1 0 0 0 0
......................................................................................................................................................................CAAGGGTACAGGTCAACGC............................................. 19 2 3 0.33 1 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................CGGGCCGCACCAGTTGGTGC.......... 20 3 5 0.20 1 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................GCCCAATTGGGGCTGTTCT............................ 19 3 9 0.11 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................GGGCGCACCAGGGGGT............ 16 2 19 0.11 2 0 0 0 0 1 0 0 1
.......................................................................................................................................................................AATGGTTCAGGTCGACGCG............................................ 19 3 17 0.06 1 1 0 0 0 0 0 0 0
....................................................................................................................AAAAAGTATTAGCAGAA................................................................................................. 17 2 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:24982913-24983142 - dsi_9575 TGGCGCGTGTTTTGGTTGGAGTTAAGCGTGTGATCGACTACGCCGTCAAGGTGAGCTTG--------------------------------AAAAG-TCGCCTGTTGCGCATCT----TGT--CCCATCTAT-TTTTTATCACTTGTTGCG---------CTCCGTTTTGCGTAATCGTCTTAATTAA--GCG----------GCAATTAAACTAATT----------CCGATTA---TTTTTC--------CCAT-GTCCAGGTGCGCGTCAAGCCCGACAAGACCGGCGTGGTCACCCAGGGCGTGAAGCA
droSec2 scaffold_4:4478850-4479079 - TGGCGCGTGTTTTGGTTGGAGTTAAGCGTGTGATCGACTACGCCGTCAAGGTGAGCTTG--------------------------------AAAAG-TCGCCTGTTGCGCATCT----TGC--CTCATCTAT-TTTTTATCACTTGTTGCG---------CTCCGTTTTGCGTAATCGTCTTAATTAA--GCG----------GCAATTAAACTAATT----------CCGGTTA---TTTTTC--------CCAT-GTCCAGGTGCGCGTCAAGCCCGACAAGACCGGCGTGGTCACCCAGGGCGTGAAGCA
dm3 chr3R:25628332-25628561 - TGGCGCGTGTTTTGGTTGGAGTTAAGCGTGTGATCGACTACGCCGTCAAGGTGAGCCTG--------------------------------AAAAG-TCGCCTGTTGCGCATCT----TGT--CCCATTGTC-TTTTTATCACTTGTTGCG---------CTCTGTTTTGCGTAATCGCCTTAATTAA--GCG----------GCAATTAAACTAATT----------CAGGTTA---CATTTA--------TCAT-GTCCAGGTGCGCGTCAAGCCCGACAAGACTGGCGTGGTCACCCAGGGCGTGAAGCA
droEre2 scaffold_4820:2374825-2375055 + TGGCCCGTGTTTTGGTTGGAGTAAAGCGTGTGATCGACTACGCCGTCAAGGTGAGCTTT--------------------------------AAAAG-TCGCCTGTTGCGCATCT----TGT--GCCATTAATTCCTTTATCACTTGTTGCG---------CTCCGTTTTGCGTAATCGCCTTAATTAA--GCG----------GCAATTAAACTAATT----------CCGGCAA---TTGTTC--------CCAT-GTACAGGTGCGCGTCAAGCCCGACAAGAGCGGCGTGGTCACCCAGGGCGTGAAGCA
droYak3 3R:20840005-20840235 + TGGCGCGTGTTTTGGTTGGAGTTAAGCGTGTGATCGACTACGCCGTCAAGGTGAGTTTG--------------------------------GAATG-CAGCCTGTTGCGCATCT----TGT--ACCTTCTATTCTTTTATCACTTGTTGCG---------CTCCGTTTTGCGTAATCGCCTTAATTAA--GCG----------GCAATTAAACTAATT----------CCGATTG---TAATTC--------CCAT-GTCCAGGTGCGCGTCAAGCCCGACAAGAGCGGCGTGGTCACCCAGGGCGTGAAGCA
droEug1 scf7180000409555:103143-103365 - TGGCGCGTGTTTTGGTTGGAGTAAAGCGTGTGATCGACTATGCCGTCAAGGTGAGCCT---------------------------------AGAAA-TCGCTTGTTGCGCATCT----TCT--TCCA-CTAT-TTTTTATCACTTGTTGC--------------GTTTTGCGTAATCGGTTTAATTAA--AGC----------GCAATTAAAGTATTT----------CCTACCT---TCTCCC--------TAAT-GTCCAGGTCCGCGTCAAGCCCGACAAAACTGGTGTGGTTACCCAGGGCGTGAAGCA
droBia1 scf7180000302113:1775662-1775889 + TGGCGCGTGTCTTGGTTGGAGTTAAGCGTGTGATCGACTACGCCGTCAAGGTGAGCCC---------------------------------AG-AA-TCGCCTGTTGCGCATCT----GCA--TCCATCTTT-TTTTTATCACTTGTTGCG---------CTCCGTTTTGCGTAATCGCCTTAATTAA--AGG----------GCAATTAAAGTAATT----------CCTTATG---TATTCC--------CAAT-CCTCAGGTGCGCGTCAAGCCTGACAAGTCGGGCGTGGTCACCCAAGGCGTGAAGCA
droTak1 scf7180000415658:10234-10465 + TGGCACGTGTTTTGGTTGGAGTAAAGCGTGTGATCGACTATGCCGTCAAGGTGAGCCC---------------------------------ACAAA-TCGCCTGTTGCGCAGCT----TCA--TCCATCTTTTTCTTTATCACTTGTTGCG---------CTCCGTTTTGCGTAATCGCTTTAATTAATTAAA----------GTAATTTAAGTAATT----------CCCAATG---TAAACC--------CAAT-TTCCAGGTGCGCGTCAAGCCCGACAAGACGGGCGTCGTCACCCAGGGCGTGAAGCA
droEle1 scf7180000491280:1886898-1887125 - TGGCACGTGTTTTGGTTGGAGTTAAGCGTGTGATTGACTACGCCGTCAAGGTGAGCTTTT-------------------------------AGAAA-CAGCCTGTTGCGTTG------TACATCCCA--TTT-TTTTTATCACTTGTTGCG---------CTCCGTTTTGCGTAATCGCTTTAATTAA--ATG----------GCAATTAAAGTAATT----------CCGATCC---T-TTTC--------CCTT-GTCCAGGTGCGCGTCAAGCCCGACAAGACCGGCGTGGTCACCCAGGGCGTGAAGCA
droRho1 scf7180000780093:18278-18506 + TGGCGCGAGTTTTGGTTGGAGTTAAGCGTGTGATTGACTACGCCGTCAAGGTGAGCTTT--------------------------------AGTAA-CAGCCTGTTGCGTATCT----TTT--CCCATCTTT-TTTTTATCACTTGTTGCG---------CTTTGTTTTGCGTAATCGCTTTAATTAA--ATG----------GCAATTAAAGTAATT----------TCGACCT---T-CATC--------CAAT-GTCCAGGTCCGCGTCAAGCCCGACAAGACAGGTGTGGTCACCCAGGGCGTGAAGCA
droFic1 scf7180000453826:968117-968347 + TGGCGCGTGTTTTGGTTGGAGTTAAGCGTGTGATTGACTACGCCGTCAAGGTTAGCCA---------------------------------AAAAT-CAGCCTGTTGCACATAT----TATTTCCCA-CTTT-TTTTTATCACTTGTTGCG---------CTCCGTTTTGCGTAATCGCTTTAATTAA--TCA---C------TTAATTAAAGTAATT----------TCAACCT---TTCTCC--------CAAT-GTCCAGGTTCGCGTCAAGCCCGACAAAACTGGTGTAGTCACTCAGGGCGTGAAGCA
droKik1 scf7180000302388:735416-735645 + TGGCGCGTGTTCTGGTTGGAGTTAAGCGTGTGATCGACTATGCCGTCAAGGTGAGCCC---------------------------------AGAAA-TCGCCTGTTGCGCACCA----AAC--ATCT-TTCT-TTTTTATCACTTGTTGCGCC-------CTCTGTTTTGCGTAATCGCTTTAATTAA--TTG----------ATAATTCAAGTAATT----------TTCCCAT---TCCATC--------CTAT-GTCCAGGTGCGCGTCAAGCCAGACAAGACCGGCGTGGTCACCCAGGGCGTAAAGCA
droAna3 scaffold_13340:18729186-18729404 - TGGCGCGTGTTCTGGTTGGCGTTAAGCGTGTGATTGACTACGCCGTCAAGGTGAGCAA---------------------------------AAAAA-TCACTTGTTGCAAATAT----TC----TTA--TTT-ATTGTATCACTTGTTGC--------------GTTTTGCGTAATCGTTTTAATTAG---AG----------ATAATAAAAGTAATT----------AAACATC---CTCT--------ATTCTT-CCATAGGTGCGCGTCAAGCCCGACAAGACCGGGGTGGTCACCCAGGGCGTGAAGCA
droBip1 scf7180000395652:441301-441523 + TGGCGCGAGTTTTGGTTGGCGTTAAGCGTGTGATTGACTACGCCGTCAAGGTGAGTAAG--------------------------------AAAAGATCACTTGTTGCTAATAT----TC----TAATATTT-TTTTTATCACTTGTTGC--------------GTTTTGCGTAATCGTTTTAATTAG---GG----------ATAATTAAAGTTATT----------GAATTTG---TTTT--------GTTCTT-CCACAGGTGCGCGTCAAGCCCGATAAGACCGGTGTGGTCACCCAGGGCGTTAAGCA
dp5 2:16471526-16471745 - TGGCCCGTGTCTTGGTTGGAGTTAAACGTGTGATCGACTATGCTGTCAAGGTAAGCCG---------------------------------AGAAA-TAGCCTGATGT------------------ATCTTC-TTCTTATCACTTGTTGC--------------GTTTTGCGTAATCGGAATAATTAA--AC-----------TTAATTAAACTATTT----------TCG-TTATCAT-TATCAAATGTGTCCAT-CTACAGGTCCGCGTCAAGCCAGACAAGACTGGCGTAGTCACCCAGGGTGTTAAGCA
droPer2 scaffold_0:3924674-3924893 + TGGCCCGTGTCTTGGTTGGAGTTAAACGTGTGATCGACTATGCTGTCAAGGTAAGCCG---------------------------------AGAAA-TAGCCTGATGT------------------ATCTTT-TTCTTATCACTTGTTGC--------------GTTTTGCGTAATCGGAATAATAAA--AC-----------TTAATTAAACTATTT----------TCA-TTATCAT-TATCAAATGTGTCCAT-CTACAGGTCCGTGTCAAGCCAGACAAGACTGGCGTAGTCACCCAGGGTGTTAAGCA
droWil2 scf2_1100000004902:5926842-5927095 - TGGCGCGTGTTTTGGTTGGTGTAAAGCGAGTGATCGACTATGCTGTAAAGGTAAAGTA-TCCATCCTATCTATCTATGTATTAGAAGTCTCA---------CTCTTCC--------CCTA-----CATCTTC-TTCTTATCACTTGTTGCTACTCTCCATTTTTGTTTTGCGTAATCGTTTTTGAT-----TGA------------ATTTAA-----TGATGCCAATTT-AACGTTCATA---T--------TTGC-GTCCAGGTTCGCGTTAAGCCGGACAAGACTGGTGTGGTTACACAAGGTGTCAAGCA
droVir3 scaffold_13047:8793843-8794050 - TGGCTCGTGTTTTGGTTGGTGTAAAGCGTGTGATCGACTATGCCGTTAAGGTAAGTGTATG-----------------------------GAAGAA-TCGTTTGTTT---------------------CTTC-CTCTTATCACTTGTTGCG---------CTTCGTTTTGCGTAATCGTTTTTATTAC--AC-----------TTAATTAATGTCTC-----------TCGATTG---GA-----------------ATTTAGGTGCGCGTTAAGCCCGAAAAAAATGGCGTTGTTACCCAAGGTGTTAAGCA
droMoj3 scaffold_6540:31887764-31887982 + TGGCTCGTGTTTTGGTTGGTGTAAAGCGTGTGATCGACTATGCCGTTAAGGTGAGT-----------------------------------AAATT-TAGTA-----TGGATCTCCGTTAG----ATTCTTC-TTCTTATCACTTGTTGCG---------CTTCGTTTTGCGTAATCGTTTTTATTAT--TC-----------TTAATTAAATATCTT----------CCGATTG---GA------------ACTT-GTGTAGGTGCGCGTGAAGCCGGAGAAAAATGGCGTTGTTACTCAAGGTGTTAAACA
droGri2 scaffold_15074:834792-835035 + TGGCTCGTGTTTTGGTTGGAGTAAAGCGTGTTATCGACTATGCCGTCAAGGTGAGCATATC----------ACAAATATAGAGAAAGAATGAAGAA-TTGCCTGTTGC---------------------TTC-CTCTTATCACTTGTTGAG---------CTTCGGTTTGCGTAATACTTATTATT-----TTTGTTTTATTACCAATT-AAGTAATT----------TCTTATG---TTGTTC--------CGTTAATTTAGGTGCGCGTTAAGCCCGAGAAAAATGGTGTTGTCACCCAGGGCGTGAAACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGGCGCGTGTTTTGGTTGGAGTTAAGCGTGTGATCGACTACGCCGTCAAGGTGAGCTTG--------------------------------AAAAG-TCGCCTGTTGCGCATCT----TGT--CCCATCTAT-TTTTTATCACTTGTTGCG---------CTCCGTTTTGCGTAATCGTCTTAATTAA--GCG----------GCAATTAAACTAATT----------CCGATTA---TTTTTC--------CCAT-GTCCAGGTGCGCGTCAAGCCCGACAAGACCGGCGTGGTCACCCAGGGCGTGAAGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................GTTAAGCGTGTGATCGACT..................................................................................................................................................................................................................................................................................1912.00201010000000000000
............TGGTTGGAGTTAAGCGTGTGATCGAC...................................................................................................................................................................................................................................................................................2611.00100000000010000000
.............................................................................................................................................................................................................................................................................................CCGGCGTGGTCACCCAGGGCGTGAAG..2611.00100010000000000000
.................GGAGTTAAGCGTGTGATCGACTACGC..............................................................................................................................................................................................................................................................................2611.00100010000000000000
..........................................................................................................................................................................................................................................................................................AGACCGGCGTGGTCACCCAGGGC........2311.00100000000000100000
..........................................................................................................................................................................................................................................................................CGCGTCAAGCCCGACAAGACC..........................2111.00100010000000000000
........................AGCGTGTGATCGACTACGCCGTC..........................................................................................................................................................................................................................................................................2311.00100000000001000000
....................GTTAAGCGTGTGATCGAC...................................................................................................................................................................................................................................................................................1811.00100010000000000000
............TGGTTGGAGTTAAGCGTGTGATCGACA..................................................................................................................................................................................................................................................................................2711.00100000000000010000
.............................GTGATCGACTACGCCGTCAAGGG.....................................................................................................................................................................................................................................................................2311.00100100000000000000
...........................GTGTGATCGACTACGCCGTCAAGGTG....................................................................................................................................................................................................................................................................2611.00100010000000000000
...........................GTGTGATCGACTACGCCGT...........................................................................................................................................................................................................................................................................1911.00100010000000000000
................TGGAGTTAAGCGTGTGATCGACTACGCC.............................................................................................................................................................................................................................................................................2811.00100000000001000000
..........................................................................................................................................................................................................................................................................CGCGTCAAGCCCGACAAGACCGGCGTG....................2711.00101000000000000000
.........TTTTGGTTGGAGTTAAGCGTGTG.........................................................................................................................................................................................................................................................................................2311.00100000000001000000
...................................................................................................................................................................................................................................................................................................TGGTCACCCAGGGCGTGAAGC.2111.00100000100000000000
.................................................................................................................................................................................................................................................................................AGCCCGACAAGACCGGCGTGGT..................2211.00100010000000000000
...........TTGGTTGGAGTTAAGCGTGTGATCGA....................................................................................................................................................................................................................................................................................2611.00100000000010000000
............................................................................................................................................................................................................................................................................................ACCGGCGTGGTCACGG.............16200.05100000000010000000
droSec2
TGGCGCGTGTTTTGGTTGGAGTTAAGCGTGTGATCGACTACGCCGTCAAGGTGAGCTTG--------------------------------AAAAG-TCGCCTGTTGCGCATCT----TGC--CTCATCTAT-TTTTTATCACTTGTTGCG---------CTCCGTTTTGCGTAATCGTCTTAATTAA--GCG----------GCAATTAAACTAATT----------CCGGTTA---TTTTTC--------CCAT-GTCCAGGTGCGCGTCAAGCCCGACAAGACCGGCGTGGTCACCCAGGGCGTGAAGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................................GTCAAGCCCGACAAGACCGGCGTGGT..................2612.0020110
................................................................................................................................................................................................................................................................................AAGCCCGACAAGACCGGCGTGGT..................2312.0020020
.............................................................................................................................................................................................................................................................................GTCAAGCCCGACAAGACCGGCGT.....................2312.0020020
..............................TGATCGACTACGCCGTCAAGGTGC...................................................................................................................................................................................................................................................................2411.0011000
.............GGTTGGAGTTAAGCGTGTGATCGA....................................................................................................................................................................................................................................................................................2411.0011000
..............................................................................................................................................................................................................................................................................................CGGCGTGGTCACCCAGGGCGTGA....2311.0010010
..............GTTGGAGTTAAGCGTGTGATCG.....................................................................................................................................................................................................................................................................................2211.0010100
....................GTTAAGCGTGTGATCGACT..................................................................................................................................................................................................................................................................................1911.0010010
.............................................................................................................................................................................................................................................................................GTCAAGCCCGACAAGACCGGC.......................2111.0010010
...............................................................................................................................................................................................................................................................................CAAGCCCGACAAGACCGGCGT.....................2111.0010010
.......................AAGCGTGTGATCGACTACG...............................................................................................................................................................................................................................................................................1911.0010010
..............................................................................................................................................................................ATCGTCTTAATTAA--GCG----------GC............................................................................................................1911.0011000
........GTTTTGGTTGGAGTTAAGC..............................................................................................................................................................................................................................................................................................1911.0010010
........GTTTTGGTTGGAGTTAAGCG.............................................................................................................................................................................................................................................................................................2011.0010001
...................AGTTAAGCGTGTGATCGACTACG...............................................................................................................................................................................................................................................................................2311.0010010
.........TTTTGGTTGGAGTTAAGCGTG...........................................................................................................................................................................................................................................................................................2111.0010100
................................................................................................................................................................................................................................................................................................GCGTGGTCACCCAGGGCGTGAAGC.2411.0010010
...............................................................................................................................................................................................................................................................................CAAGCCCGACAAGACCGGCGTGGT..................2411.0010010
.....CGTGTTTTGGTTGGAGTTAAGTT.............................................................................................................................................................................................................................................................................................2311.0010001
..............................................CAAGGTGAGCTTG--------------------------------AAAAG-TCGC....................................................................................................................................................................................................................2211.0010001
...........................GTGTGATCGACTACGCCGT...........................................................................................................................................................................................................................................................................1911.0010100
....................GTTAAGCGTGTGATCGACTACGCCGT...........................................................................................................................................................................................................................................................................2611.0010100
.....................................................................................................................................................................................................................................................................AGGTGCGCGTCAAGCCCGACA...............................2111.0010001
..............GTTGGAGTTAAGCGTGTGATC......................................................................................................................................................................................................................................................................................2111.0011000
..................................................................................................................................................................................................................................................................................................GTGGTCACCCAGGGCGTGAAG..2111.0011000
.............GGTTGGAGTTAAGCGTGTGA........................................................................................................................................................................................................................................................................................2011.0010100
......................................................................................................................................................................................................................................................................................GACAAGACCGGCGTGGTCACCCAGGGC........2711.0010010
..........TTTGGTTGGAGTTAAGCGTGTGATC......................................................................................................................................................................................................................................................................................2511.0010100
..........................................................................................................................................................................................................................................................................................AGACCGGCGTGGTCACCCAGGGC........2311.0010010
..................................................................................................................................................................................................................................................................................GCCCGACAAGACCGGCGTGGT..................2111.0010010
........................AGCGTGTGATCGACTACGCCG............................................................................................................................................................................................................................................................................2111.0011000
..............................................................................................................................................................................................................................................................................................CGGCGTGGTCACCCAGGGC........1911.0010010
.........................GCGTGTGATCGACTACGCC.............................................................................................................................................................................................................................................................................1911.0010010
..........................................................................................................................................................................................................................................................................................AGACCGGCGTGGTCACCCAGGG.........2211.0010001
dm3
TGGCGCGTGTTTTGGTTGGAGTTAAGCGTGTGATCGACTACGCCGTCAAGGTGAGCCTG--------------------------------AAAAG-TCGCCTGTTGCGCATCT----TGT--CCCATTGTC-TTTTTATCACTTGTTGCG---------CTCTGTTTTGCGTAATCGCCTTAATTAA--GCG----------GCAATTAAACTAATT----------CAGGTTA---CATTTA--------TCAT-GTCCAGGTGCGCGTCAAGCCCGACAAGACTGGCGTGGTCACCCAGGGCGTGAAGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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..............................TGATCGACTACGCCGTCAAGG......................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................T----TGT--CCCATTGTC-TTTTTATC............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................................................................................................CCTGTTGCGCATCT----TGT--CCCA..........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...................................................................................................................................................................................................................................................A--------TCAT-GTCCAGGTGCGCGTCA........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
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...........................GTGTGATCGACTACGCCGT...........................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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........................................................................................................................................................................................................................................................................................CAAGACTGGCGTGGTCACCCAGGGCG.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................GCG----------GCAATTAAACTAATT----------CAGT.................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
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.................GGAGTTAAGCGTGTGATCGACTACGCC.............................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GTTAAGCGTGTGATCGACTACGCC.............................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TGTGATCGACTACGCCGTCA.........................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
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................................................................................................................................................................................CGCCTTAATTAA--GCG----------GCAAT.........................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.......................AAGCGTGTGATCGACTACGCCGTCAAGG......................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
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............TGGTTGGAGTTAAGCGTGTGATCGA....................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GTGTGATCGACTACGCCG............................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................GACTGGCGTGGTCACCCAGGGCGT......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TGCGCGTCAAGCCCGACAAGACTGG........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GGCGCGTGTTTTGGTTGGA.....................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TTTGGTTGGAGTTAAGCGTGT..........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................CAAGCCCGACAAGACTGG........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GTTGGAGTTAAGCGTGTGATCGACTACG...............................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AGCGTGTGATCGACTACGC..............................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TTGCG---------CTCTGTTTTGCGTAAT.........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................................................................................................................................................................................................................................................................................CTGGCGTGGTCACCCAGGGC........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................GTGCGCGTCAAGCCCGACA...............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..............................................................................................................................................................................................................................................................................................TGGCGTGGTCACCCAGGGCG.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.......................AAGCGTGTGATCGACTACGCC.............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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............................TGTGATCGACTACGCCGTCAA........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TAAGCGTGTGATCGACTACGCC.............................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTGGAGTTAAGCGTGTGATCGACTAC................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................TCCAGGTGCGCGTCAAGCC....................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............GGTTGGAGTTAAGCGTGTGA........................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................GACTGGCGTGGTCACCCAGGGCGTG.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGGCGCGTGTTTTGGTTGGAGTTAAG...............................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GAGTTAAGCGTGTGATCGA....................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................GTGCGCGTCAAGCCCGACAAGACTGG........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............GTTGGAGTTAAGCGTGTGATCGACTACT...............................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TTTTGGTTGGAGTTAAGCGTGT..........................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............GTTGGAGTTAAGCGTGTGA........................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................AGACTGGCGTGGTCACCCA............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GTGTTTTGGTTGGAGTTAAG...............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TTTGGTTGGAGTTAAGCGTGTGATCGA....................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................TGTTGCG---------CTCTGTTTTGCGTA...........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................T----------CAGGTTA---CATTTA--------TCAT-GTC.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................GGTCACCCAGGGCGTGAAG..1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GGAGTTAAGCGTGTGATCGAC...................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
........GTTTTGGTTGGAGTTAAGCGTGTGA........................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................TGTTGCG---------CTCTGTTTTGC..............................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................CAAGCCCGACAAGACTGGCG......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GTTTTGGTTGGAGTTAAGCGTGTGATC......................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................CGTCAAGCCCGACAAGACTGG........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GTTGGAGTTAAGCGTGT..........................................................................................................................................................................................................................................................................................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TGGCCCGTGTTTTGGTTGGAGTAAAGCGTGTGATCGACTACGCCGTCAAGGTGAGCTTT--------------------------------AAAAG-TCGCCTGTTGCGCATCT----TGT--GCCATTAATTCCTTTATCACTTGTTGCG---------CTCCGTTTTGCGTAATCGCCTTAATTAA--GCG----------GCAATTAAACTAATT----------CCGGCAA---TTGTTC--------CCAT-GTACAGGTGCGCGTCAAGCCCGACAAGAGCGGCGTGGTCACCCAGGGCGTGAAGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................GTCAAGCCCGACAAGAGCGGC.......................2113.0030110010
....................GTAAAGCGTGTGATCGACTACGC..............................................................................................................................................................................................................................................................................2313.0031200000
.............................GTGATCGACTACGCCGTCAAG.......................................................................................................................................................................................................................................................................2111.0011000000
...................AGTAAAGCGTGTGATCGACTACGC..............................................................................................................................................................................................................................................................................2411.0010000100
......................AAAGCGTGTGATCGACTA.................................................................................................................................................................................................................................................................................1811.0011000000
......................................................................................................................................................................................................................................................................................GACAAGAGCGGCGTGGTC.................1811.0010000100
..............................TGATCGACTACGCCGTCAAGG......................................................................................................................................................................................................................................................................2111.0011000000
.............................................................................................................................................ACTTGTTGCG---------CTCCGTTTTGC..............................................................................................................................................2111.0010000100
.............................................................................................................................................................................................................................................................................................GCGGCGTGGTCACCCAGGG.........1911.0011000000
..............GTTGGAGTAAAGCGTGTGATCGACTA.................................................................................................................................................................................................................................................................................2611.0010000100
................TGGAGTAAAGCGTGTGATCGACTACGCC.............................................................................................................................................................................................................................................................................2811.0010000100
....................GTAAAGCGTGTGATCGACTACG...............................................................................................................................................................................................................................................................................2211.0010001000
.GGCCCGTGTTTTGGTTGGAGTAAAGC..............................................................................................................................................................................................................................................................................................2611.0010001000
.GGCCCGTGTTTTGGTTGGAGT...................................................................................................................................................................................................................................................................................................2111.0010001000
............................................................................................................................................................................................................................................................................CGTCAAGCCCGACAAGAGCGGCGT.....................2411.0011000000
........GTTTTGGTTGGAGTAAAGC..............................................................................................................................................................................................................................................................................................1911.0010000100
.................GGAGTAAAGCGTGTGATCGA....................................................................................................................................................................................................................................................................................2011.0010000100
.................GGAGTAAAGCGTGTGATCGACTA.................................................................................................................................................................................................................................................................................2311.0010000100
...............................GATCGACTACGCCGTCAAGGTGC...................................................................................................................................................................................................................................................................2311.0011000000
...........................................................................................................................................................................................................................................................................................GAGCGGCGTGGTCACCCAG...........1911.0011000000
droYak3
TGGCGCGTGTTTTGGTTGGAGTTAAGCGTGTGATCGACTACGCCGTCAAGGTGAGTTTG--------------------------------GAATG-CAGCCTGTTGCGCATCT----TGT--ACCTTCTATTCTTTTATCACTTGTTGCG---------CTCCGTTTTGCGTAATCGCCTTAATTAA--GCG----------GCAATTAAACTAATT----------CCGATTG---TAATTC--------CCAT-GTCCAGGTGCGCGTCAAGCCCGACAAGAGCGGCGTGGTCACCCAGGGCGTGAAGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................GTTAAGCGTGTGATCGACT..................................................................................................................................................................................................................................................................................1912.00200000020000
..........................................................................................................................................................................................................................................................................................AGAGCGGCGTGGTCACCCAG...........2011.00100000010000
..................GAGTTAAGCGTGTGATCGACT..................................................................................................................................................................................................................................................................................2111.00100000010000
..................................CGACTACGCCGTCAAGGTG....................................................................................................................................................................................................................................................................1911.00100100000000
........GTTTTGGTTGGAGTTAAGC..............................................................................................................................................................................................................................................................................................1911.00100000010000
....................GTTAAGCGTGTGATCGAC...................................................................................................................................................................................................................................................................................1811.00100000010000
........GTTTTGGTTGGAGTTAAGCGTGC..........................................................................................................................................................................................................................................................................................2311.00100100000000
.........................................................................................................................................................................................................................................................................GCGCGTCAAGCCCGACAAGAGC..........................2211.00100000010000
.................................................................................................................................................................................................................................................................................AGCCCGACAAGAGCGGCGTG....................2011.00101000000000
............TGGTTGGAGTTAAGCGTGTGATCGAC...................................................................................................................................................................................................................................................................................2611.00101000000000
...............TTGGAGTTAAGCGTGTGATCGACTACGC..............................................................................................................................................................................................................................................................................2811.00100000010000
.....................................................................................................................................................................................................................................................................................................GTCACCCAGGGCGTGAAGC.1911.00101000000000
..............................................................................................................................................................................................................................................................................................CGGCGTGGTCACCCAGGGC........1911.00101000000000
....................GTTAAGCGTGTGATCGACTACGC..............................................................................................................................................................................................................................................................................2311.00100000010000
.................GGAGTTAAGCGTGTGATCGACTACGCC.............................................................................................................................................................................................................................................................................2711.00100000010000
.....................TTAAGCGTGTGATCGACTACGC..............................................................................................................................................................................................................................................................................2211.00101000000000
droEug1
TGGCGCGTGTTTTGGTTGGAGTAAAGCGTGTGATCGACTATGCCGTCAAGGTGAGCCT---------------------------------AGAAA-TCGCTTGTTGCGCATCT----TCT--TCCA-CTAT-TTTTTATCACTTGTTGC--------------GTTTTGCGTAATCGGTTTAATTAA--AGC----------GCAATTAAAGTATTT----------CCTACCT---TCTCCC--------TAAT-GTCCAGGTCCGCGTCAAGCCCGACAAAACTGGTGTGGTTACCCAGGGCGTGAAGCASizeHit CountTotal NormTotal
No Reads
droBia1
TGGCGCGTGTCTTGGTTGGAGTTAAGCGTGTGATCGACTACGCCGTCAAGGTGAGCCC---------------------------------AG-AA-TCGCCTGTTGCGCATCT----GCA--TCCATCTTT-TTTTTATCACTTGTTGCG---------CTCCGTTTTGCGTAATCGCCTTAATTAA--AGG----------GCAATTAAAGTAATT----------CCTTATG---TATTCC--------CAAT-CCTCAGGTGCGCGTCAAGCCTGACAAGTCGGGCGTGGTCACCCAAGGCGTGAAGCASizeHit CountTotal NormTotal
No Reads
droTak1
TGGCACGTGTTTTGGTTGGAGTAAAGCGTGTGATCGACTATGCCGTCAAGGTGAGCCC---------------------------------ACAAA-TCGCCTGTTGCGCAGCT----TCA--TCCATCTTTTTCTTTATCACTTGTTGCG---------CTCCGTTTTGCGTAATCGCTTTAATTAATTAAA----------GTAATTTAAGTAATT----------CCCAATG---TAAACC--------CAAT-TTCCAGGTGCGCGTCAAGCCCGACAAGACGGGCGTCGTCACCCAGGGCGTGAAGCASizeHit CountTotal NormTotal
No Reads
droEle1
TGGCACGTGTTTTGGTTGGAGTTAAGCGTGTGATTGACTACGCCGTCAAGGTGAGCTTTT-------------------------------AGAAA-CAGCCTGTTGCGTTG------TACATCCCA--TTT-TTTTTATCACTTGTTGCG---------CTCCGTTTTGCGTAATCGCTTTAATTAA--ATG----------GCAATTAAAGTAATT----------CCGATCC---T-TTTC--------CCTT-GTCCAGGTGCGCGTCAAGCCCGACAAGACCGGCGTGGTCACCCAGGGCGTGAAGCASizeHit CountTotal NormTotal
No Reads
droRho1
TGGCGCGAGTTTTGGTTGGAGTTAAGCGTGTGATTGACTACGCCGTCAAGGTGAGCTTT--------------------------------AGTAA-CAGCCTGTTGCGTATCT----TTT--CCCATCTTT-TTTTTATCACTTGTTGCG---------CTTTGTTTTGCGTAATCGCTTTAATTAA--ATG----------GCAATTAAAGTAATT----------TCGACCT---T-CATC--------CAAT-GTCCAGGTCCGCGTCAAGCCCGACAAGACAGGTGTGGTCACCCAGGGCGTGAAGCASizeHit CountTotal NormTotal
No Reads
droFic1
TGGCGCGTGTTTTGGTTGGAGTTAAGCGTGTGATTGACTACGCCGTCAAGGTTAGCCA---------------------------------AAAAT-CAGCCTGTTGCACATAT----TATTTCCCA-CTTT-TTTTTATCACTTGTTGCG---------CTCCGTTTTGCGTAATCGCTTTAATTAA--TCA---C------TTAATTAAAGTAATT----------TCAACCT---TTCTCC--------CAAT-GTCCAGGTTCGCGTCAAGCCCGACAAAACTGGTGTAGTCACTCAGGGCGTGAAGCASizeHit CountTotal NormTotal
No Reads
droKik1
TGGCGCGTGTTCTGGTTGGAGTTAAGCGTGTGATCGACTATGCCGTCAAGGTGAGCCC---------------------------------AGAAA-TCGCCTGTTGCGCACCA----AAC--ATCT-TTCT-TTTTTATCACTTGTTGCGCC-------CTCTGTTTTGCGTAATCGCTTTAATTAA--TTG----------ATAATTCAAGTAATT----------TTCCCAT---TCCATC--------CTAT-GTCCAGGTGCGCGTCAAGCCAGACAAGACCGGCGTGGTCACCCAGGGCGTAAAGCASizeHit CountTotal NormTotal
No Reads
droAna3
TGGCGCGTGTTCTGGTTGGCGTTAAGCGTGTGATTGACTACGCCGTCAAGGTGAGCAA---------------------------------AAAAA-TCACTTGTTGCAAATAT----TC----TTA--TTT-ATTGTATCACTTGTTGC--------------GTTTTGCGTAATCGTTTTAATTAG---AG----------ATAATAAAAGTAATT----------AAACATC---CTCT--------ATTCTT-CCATAGGTGCGCGTCAAGCCCGACAAGACCGGGGTGGTCACCCAGGGCGTGAAGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................GTTAAGCGTGTGATTGACTACGC..............................................................................................................................................................................................................................................................................2313.003010020
......................................................................................................................................................................................................................................................................................GACAAGACCGGGGTGGTCACCCAGGGC........2712.002020000
......................................................................................................................................................................................................................................................................................GACAAGACCGGGGTGGTCACCCAG...........2411.001100000
..........................CGTGTGATTGACTACGCCGT...........................................................................................................................................................................................................................................................................2011.001000001
.....................................................................................................................................................................................................................................................................................CGACAAGACCGGGGTGGT..................1811.001010000
........GTTCTGGTTGGCGTTAAGCGT............................................................................................................................................................................................................................................................................................2111.001010000
.....CGTGTTCTGGTTGGCGTTAAGC..............................................................................................................................................................................................................................................................................................2211.001100000
..................................................................................................................................................................................................................................................................................................GTGGTCACCCAGGGCGTGAAGCA2311.001000010
....................................................................................................................................................................................................................................................................................................GGTCACCCAGGGCGTGAAGC.2011.001100000
......................................................................................................................................................................................................................................................................................GACAAGACCGGGGTGGTCACCCAGG..........2511.001010000
...........................GTGTGATTGACTACGCCGTCAA........................................................................................................................................................................................................................................................................2211.001000010
..GCGCGTGTTCTGGTTGGCGTTAAGCGT............................................................................................................................................................................................................................................................................................2711.001010000
...............................................................................................................................................................................................................................................................................................GGGGTGGTCACCCAGGGCGTG.....2111.001000001
...................................GACTACGCCGTCAAGGTGC...................................................................................................................................................................................................................................................................1911.001010000
.................................................................................................................................................................................................................................................................................................GGTGGTCACCCAGGGCGTG.....1911.001010000
..............................................................................................................................................................................................................................................................................................CGGGGTGGTCACCCAGGGCGTGAAGCA2711.001000001
................TGGCGTTAAGCGTGTGATTGAC...................................................................................................................................................................................................................................................................................2211.001000100
.................GGCGTTAAGCGTGTGATTGA....................................................................................................................................................................................................................................................................................2011.001000010
TGGCGCGTGTTCTGGTTGGCGTTA.................................................................................................................................................................................................................................................................................................2411.001100000
......................................................................................................................................................................................................................................................................................GACAAGACCGGGGTGGTCACCC.............2211.001010000
.GGCGCGTGTTCTGGTTGGCGTTA.................................................................................................................................................................................................................................................................................................2311.001100000
........................................................................................................................................................................................................................................................................................CAAGACCGGGGTGGTCACCCA............2111.001010000
.......................................................................................................................................................................................................................................................................GTGCGCGTCAAGCCCGACA...............................1911.001100000
....................GTTAAGCGTGTGATTGACT..................................................................................................................................................................................................................................................................................1911.001010000
................................................................................................................................................................................................................................................................................................GGGTGGTCACCCAGGGCGTG.....2011.001100000
.................................................................................................................................................................................................................................................................................AGCCCGACAAGACCGGGGTGGT..................2211.001100000
droBip1
TGGCGCGAGTTTTGGTTGGCGTTAAGCGTGTGATTGACTACGCCGTCAAGGTGAGTAAG--------------------------------AAAAGATCACTTGTTGCTAATAT----TC----TAATATTT-TTTTTATCACTTGTTGC--------------GTTTTGCGTAATCGTTTTAATTAG---GG----------ATAATTAAAGTTATT----------GAATTTG---TTTT--------GTTCTT-CCACAGGTGCGCGTCAAGCCCGATAAGACCGGTGTGGTCACCCAGGGCGTTAAGCASizeHit CountTotal NormTotal
No Reads
dp5
TGGCCCGTGTCTTGGTTGGAGTTAAACGTGTGATCGACTATGCTGTCAAGGTAAGCCG---------------------------------AGAAA-TAGCCTGATGT------------------ATCTTC-TTCTTATCACTTGTTGC--------------GTTTTGCGTAATCGGAATAATTAA--AC-----------TTAATTAAACTATTT----------TCG-TTATCAT-TATCAAATGTGTCCAT-CTACAGGTCCGCGTCAAGCCAGACAAGACTGGCGTAGTCACCCAGGGTGTTAAGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................TGATCGACTATGCTGTCAAGG......................................................................................................................................................................................................................................................................2112.0020200000000
..GCCCGTGTCTTGGTTGGAGTT..................................................................................................................................................................................................................................................................................................2111.0010100000000
............................TGTGATCGACTATGCTGTCAAGGTC....................................................................................................................................................................................................................................................................2511.0010100000000
.........TCTTGGTTGGAGTTAAACGTGTGAT.......................................................................................................................................................................................................................................................................................2511.0010100000000
........GTCTTGGTTGGAGTTAAAC..............................................................................................................................................................................................................................................................................................1911.0010010000000
.....................TTAAACGTGTGATCGACTATGCTGTC..........................................................................................................................................................................................................................................................................2611.0010001000000
................................................................................................................................................................................................................................................................................................GCGTAGTCACCCAGGGTG.......1811.0010100000000
.................................TCGACTATGCTGTCAAGGT.....................................................................................................................................................................................................................................................................1911.0010100000000
.....................................................................................................................................................................................................................................................................................AGACAAGACTGGCGTAGT..................1811.0010100000000
.............GGTTGGAGTTAAACGTGTGATCGACTA.................................................................................................................................................................................................................................................................................2711.0010100000000
.................GGAGTTAAACGTGTGATCGACTATGCT.............................................................................................................................................................................................................................................................................2711.0010100000000
.................GGAGTTAAACGTGTGATCGA....................................................................................................................................................................................................................................................................................2011.0010100000000
......................TAAACGTGTGATCGACTAT................................................................................................................................................................................................................................................................................1911.0010100000000
...............................GATCGACTATGCTGTCAAGGTCC...................................................................................................................................................................................................................................................................2311.0010100000000
.........................................................................................................................................................................................................................................................................CCGCGTCAAGCCAGACAAGACTGGC.......................2511.0010100000000
.....CGTGTCTTGGTTGGAGTTAAACGTGTG.........................................................................................................................................................................................................................................................................................2711.0010100000000
..........................................................................................................................................................................................................................................................................CGCGTCAAGCCAGACAAGA............................1911.0010100000000
......................................................................................................................................................................................................................................................................GGTCCGCGTCAAGCCAGACA...............................2011.0010100000000
TGGCCCGTGTCTTGGTTGGAGTTA.................................................................................................................................................................................................................................................................................................2411.0010000010000
........................................................................................................................................................................................................................................................................................CAAGACTGGCGTAGTCACCCAGGGT........2511.0010100000000
...............................GATCGACTATGCTGTCAAGGT.....................................................................................................................................................................................................................................................................2111.0010010000000
...........................GTGTGATCGACTATGCTGT...........................................................................................................................................................................................................................................................................1911.0010100000000
................TGGAGTTAAACGTGTGATCGA....................................................................................................................................................................................................................................................................................2111.0010100000000
.....................................CTATGCTGTCAAGGTAAGCCG---------------------------------..............................................................................................................................................................................................................................2111.0010100000000
.....................................................................................................................................................................................................................................................................AGGTCCGCGTCAAGCCAGACAAGACT..........................2611.0010100000000
.GGCCCGTGTCTTGGTTGGAG....................................................................................................................................................................................................................................................................................................2011.0010000000010
....................GTTAAACGTGTGATCGACT..................................................................................................................................................................................................................................................................................1911.0010100000000
.......TGTCTTGGTTGGAGTTAAAC..............................................................................................................................................................................................................................................................................................2011.0010100000000
..............................................................................................................................................................................................................................................................................................TGGCGTAGTCACCCAGGGTGTTAAG..2511.0010100000000
droPer2
TGGCCCGTGTCTTGGTTGGAGTTAAACGTGTGATCGACTATGCTGTCAAGGTAAGCCG---------------------------------AGAAA-TAGCCTGATGT------------------ATCTTT-TTCTTATCACTTGTTGC--------------GTTTTGCGTAATCGGAATAATAAA--AC-----------TTAATTAAACTATTT----------TCA-TTATCAT-TATCAAATGTGTCCAT-CTACAGGTCCGTGTCAAGCCAGACAAGACTGGCGTAGTCACCCAGGGTGTTAAGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................AAACGTGTGATCGACTATGCTGT...........................................................................................................................................................................................................................................................................23110.00101000000
.......................AAACGTGTGATCGACTATGCTGTC..........................................................................................................................................................................................................................................................................2415.005500000
....................GTTAAACGTGTGATCGACTATGCTGT...........................................................................................................................................................................................................................................................................2615.005320000
......................................................................................................................................................................................................................................................................................GACAAGACTGGCGTAGTCACCCAGGGT........2712.002100001
...........................GTGTGATCGACTATGCTGT...........................................................................................................................................................................................................................................................................1912.002200000
.................GGAGTTAAACGTGTGATCGAC...................................................................................................................................................................................................................................................................................2112.002000002
........GTCTTGGTTGGAGTTAAA...............................................................................................................................................................................................................................................................................................1811.001100000
.....CGTGTCTTGGTTGGAGTT..................................................................................................................................................................................................................................................................................................1811.001001000
....................GTTAAACGTGTGATCGACTATGCTGC...........................................................................................................................................................................................................................................................................2611.001100000
.........................................................................................................................................................................................................................................................................CCGTGTCAAGCCAGACAAGACTGGC.......................2511.001001000
....................GTTAAACGTGTGATCGACC..................................................................................................................................................................................................................................................................................1911.001100000
............TGGTTGGAGTTAAACGTGTG.........................................................................................................................................................................................................................................................................................2011.001000001
..........CTTGGTTGGAGTTAAACGTGTGATCGAC...................................................................................................................................................................................................................................................................................2811.001100000
..........................CGTGTGATCGACTATGCT.............................................................................................................................................................................................................................................................................1811.001100000
.......................AAACGTGTGATCGACTATGCTGG...........................................................................................................................................................................................................................................................................2311.001100000
........................AACGTGTGATCGACTATGCTGTCAAGGG.....................................................................................................................................................................................................................................................................2811.001100000
............................................................................................................................................................................................................................................................................................ACTGGCGTAGTCACCCAGGGTGTTAAGC.2811.001100000
...................AGTTAAACGTGTGATCGACT..................................................................................................................................................................................................................................................................................2011.001100000
.........................ACGTGTGATCGACTATGCTGT...........................................................................................................................................................................................................................................................................2111.001100000
.GGCCCGTGTCTTGGTTGGA.....................................................................................................................................................................................................................................................................................................1911.001001000
....................................................................................................................................................................GTTTTGCGTAATCGGAATA..................................................................................................................................1911.001100000
........................AACGTGTGATCGACTATGCTGTCAAGGT.....................................................................................................................................................................................................................................................................2811.001100000
.....................................................................................................................................................................................................................................................................................AGACAAGACTGGCGTAGT..................1811.001010000
droWil2
TGGCGCGTGTTTTGGTTGGTGTAAAGCGAGTGATCGACTATGCTGTAAAGGTAAAGTA-TCCATCCTATCTATCTATGTATTAGAAGTCTCA---------CTCTTCC--------CCTA-----CATCTTC-TTCTTATCACTTGTTGCTACTCTCCATTTTTGTTTTGCGTAATCGTTTTTGAT-----TGA------------ATTTAA-----TGATGCCAATTT-AACGTTCATA---T--------TTGC-GTCCAGGTTCGCGTTAAGCCGGACAAGACTGGTGTGGTTACACAAGGTGTCAAGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........GTTTTGGTTGGTGTAAAGCGAGT..........................................................................................................................................................................................................................................................................................2314.00400220
..........TTTGGTTGGTGTAAAGCGAGT..........................................................................................................................................................................................................................................................................................2114.00410030
..........................................................................................................................................................................................................................................................................CGCGTTAAGCCGGACAAGACTGGT.......................2412.00200200
..............GTTGGTGTAAAGCGAGTGATCGA....................................................................................................................................................................................................................................................................................2312.00200200
....GCGTGTTTTGGTTGGTGT...................................................................................................................................................................................................................................................................................................1812.00220000
.........TTTTGGTTGGTGTAAAGCGAGT..........................................................................................................................................................................................................................................................................................2212.00200110
.................GGTGTAAAGCGAGTGATCGA....................................................................................................................................................................................................................................................................................2012.00200110
........GTTTTGGTTGGTGTAAAGC..............................................................................................................................................................................................................................................................................................1912.00200020
..................................CGACTATGCTGTAAAGGTT....................................................................................................................................................................................................................................................................1911.00100100
.......................................................................................................................................................................................................................................................................GTTCGCGTTAAGCCGGACAAGACTGGTGT.....................2911.00100100
.............................................................................................................................................................................................................................................................................GTTAAGCCGGACAAGACTGG........................2011.00100100
...............................................................................................................................................................................................................................................................................TAAGCCGGACAAGACTGGTGTGGTT.................2511.00100010
...............TTGGTGTAAAGCGAGTGATCG.....................................................................................................................................................................................................................................................................................2111.00100001
....................................................................................................................................................................................................................................................................................CGGACAAGACTGGTGTGG...................1811.00100010
...........................................................................................................................................................................................................................................................................GCGTTAAGCCGGACAAGACTGGT.......................2311.00101000
....................................................................................................................................................................................................................................................................................................GGTTACACAAGGTGTCAAGCA2111.00100100
................TGGTGTAAAGCGAGTGATCGA....................................................................................................................................................................................................................................................................................2111.00100001
..............GTTGGTGTAAAGCGAGTGA........................................................................................................................................................................................................................................................................................1911.00100100
...........................GAGTGATCGACTATGCTGTAAAGG......................................................................................................................................................................................................................................................................2411.00100010
...........................GAGTGATCGACTATGCTGTAA.........................................................................................................................................................................................................................................................................2111.00100100
................TGGTGTAAAGCGAGTGATCGAC...................................................................................................................................................................................................................................................................................2211.00100010
.........................................................................................................................................................................................................................................................................................AAGACTGGTGTGGTTACACA............2011.00101000
..................GTGTAAAGCGAGTGATCGACT..................................................................................................................................................................................................................................................................................2111.00100100
...........................GAGTGATCGACTATGCTGTAAA........................................................................................................................................................................................................................................................................2211.00100100
...........TTGGTTGGTGTAAAGCGAGT..........................................................................................................................................................................................................................................................................................2011.00100010
..................GTGTAAAGCGAGTGATCGACTATG...............................................................................................................................................................................................................................................................................2411.00100100
...............................................................................................................................................................................................................................................................................................GGTGTGGTTACACAAGGTGTC.....2111.00100010
.............................................................................................................................................................................................................................................................................GTTAAGCCGGACAAGACTGGTGTGGT..................2611.00100010
.GGCGCGTGTTTTGGTTGGT.....................................................................................................................................................................................................................................................................................................1911.00100010
.............GGTTGGTGTAAAGCGAGT..........................................................................................................................................................................................................................................................................................1811.00100100
............TGGTTGGTGTAAAGCGAG...........................................................................................................................................................................................................................................................................................1811.00100010
...............TTGGTGTAAAGCGAGTGATCGACTATGCT.............................................................................................................................................................................................................................................................................2911.00100100
......................................................................................................................................................................................................................................................................................GACAAGACTGGTGTGGTTACACAAGGT........2711.00100010
.............................................................................................................................................................................................................................................................................GTTAAGCCGGACAAGACT..........................1811.00100010
.....................................................................................................................................................................................................................................................................................GGACAAGACTGGTGTGGTTAC...............2111.00100010
......GTGTTTTGGTTGGTGTAAAGCGA............................................................................................................................................................................................................................................................................................2311.00100100
..........TTTGGTTGGTGTAAAGCGAGTGATCGA....................................................................................................................................................................................................................................................................................2711.00100100
......................................................................................................................................................................................................................................................................................GACAAGACTGGTGTGGTT.................1811.00100010
.............................................................................................................................................................................................................................................................................GTTAAGCCGGACAAGACTGGTGTGG...................2511.00100010
TGGCGCGTGTTTTGGTTGGTGT...................................................................................................................................................................................................................................................................................................2211.00100010
........GTTTTGGTTGGTGTAAAGCGA............................................................................................................................................................................................................................................................................................2111.00100010
..............GTTGGTGTAAAGCGAGTGAT.......................................................................................................................................................................................................................................................................................2011.00110000
........................................................................................................................................................................................................................................................................................CAAGACTGGTGTGGTTACACAAGG.........2411.00100010
.........................................................................................................................................................................................................................................................................................AAGACTGGTGTGGTTACAC.............1911.00101000
..........................................................................................................................................................................................................................................................................CGCGTTAAGCCGGACAAGACTGGTGT.....................2611.00100100
.............GGTTGGTGTAAAGCGAGTGATCGAC...................................................................................................................................................................................................................................................................................2511.00100010
...........................GAGTGATCGACTATGCTGTAAAGGT.....................................................................................................................................................................................................................................................................2511.00100010
...........................................................................................................................................................................................................................................................................................GACTGGTGTGGTTACACAAGGTGTC.....2511.00100001
....................GTAAAGCGAGTGATCGACTATG...............................................................................................................................................................................................................................................................................2211.00100010
.............................................................................................................................................................................................................................................................................GTTAAGCCGGACAAGACTGGT.......................2111.00100100
............................AGTGATCGACTATGCTGTAAAG.......................................................................................................................................................................................................................................................................2211.00100010
.............................................................................................................................................................................................................................................................................GTTAAGCCGGACAAGACTG.........................1911.00100010
...........................GAGTGATCGACTATGCTGTAAAGGTT....................................................................................................................................................................................................................................................................2611.00100100
...................................GACTATGCTGTAAAGGTT....................................................................................................................................................................................................................................................................1811.00101000
...........................................................................................................................................................................................................................................................................................GACTGGTGTGGTTACACAAGGT........2211.00100100
............TGGTTGGTGTAAAGCGAGT..........................................................................................................................................................................................................................................................................................1911.00100100
........................................................................................................................................................................................................................................................................TTCGCGTTAAGCCGGACAAGACTGGT.......................2611.00100100
droVir3
TGGCTCGTGTTTTGGTTGGTGTAAAGCGTGTGATCGACTATGCCGTTAAGGTAAGTGTATG-----------------------------GAAGAA-TCGTTTGTTT---------------------CTTC-CTCTTATCACTTGTTGCG---------CTTCGTTTTGCGTAATCGTTTTTATTAC--AC-----------TTAATTAATGTCTC-----------TCGATTG---GA-----------------ATTTAGGTGCGCGTTAAGCCCGAAAAAAATGGCGTTGTTACCCAAGGTGTTAAGCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................GTAAAGCGTGTGATCGACTATGCC.............................................................................................................................................................................................................................................................................2413.003000100000000001000000000000000000000000000000000000000000001000
....................GTAAAGCGTGTGATCGAC...................................................................................................................................................................................................................................................................................1813.003000200000000000000000000000000000000000000000000000000000001000
..........TTTGGTTGGTGTAAAGCGTGTG.........................................................................................................................................................................................................................................................................................2212.002001000000000000000000000000000000000000000000000000000000001000
...........TTGGTTGGTGTAAAGCGTGTGATCGAC...................................................................................................................................................................................................................................................................................2712.002000000000000000100000000000000000000010000000000000000000000000
....................GTAAAGCGTGTGATCGACTATGC..............................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................AAAATGGCGTTGTTACCCAAG..........2111.001001000000000000000000000000000000000000000000000000000000000000
..GCTCGTGTTTTGGTTGGTGT...................................................................................................................................................................................................................................................................................................2011.001000000000010000000000000000000000000000000000000000000000000000
...........................GTGTGATCGACTATGCCGTTAAGGT.....................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000001000000000000000000000000000
.......................................................TGTATG-----------------------------GAAGAA-TCGTTTGTTT---------------------.........................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
.........................GCGTGTGATCGACTATGCCGTT..........................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
......................AAAGCGTGTGATCGACTATGC..............................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................ATGGCGTTGTTACCCAAGGT........2011.001000000000000000000000000000000000100000000000000000000000000000
...............TTGGTGTAAAGCGTGTGATCGACT..................................................................................................................................................................................................................................................................................2411.001000000001000000000000000000000000000000000000000000000000000000
TGGCTCGTGTTTTGGTTGGTGC...................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................GGTGCGCGTTAAGCCCGAAAA..............................2111.001000000000000000001000000000000000000000000000000000000000000000
....................GTAAAGCGTGTGATCGACTATGCCGT...........................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AAAAAATGGCGTTGTTACCC.............2011.001000000001000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GCCCGAAAAAAATGGCGTTG...................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................GTTGTTACCCAAGGTGTTAA...2011.001000000000000000000000000000000010000000000000000000000000000000
..............GTTGGTGTAAAGCGTGTGATC......................................................................................................................................................................................................................................................................................2111.001000000000000010000000000000000000000000000000000000000000000000
.................GGTGTAAAGCGTGTGATC......................................................................................................................................................................................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
..............GTTGGTGTAAAGCGTGTGATCGACT..................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000001000
...........TTGGTTGGTGTAAAGCGTGTGATCGACT..................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................AAATGGCGTTGTTACCCAA...........1911.001000000000000001000000000000000000000000000000000000000000000000
...............TTGGTGTAAAGCGTGTGATCGACTAT................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
TGGCTCGTGTTTTGGTTGGT.....................................................................................................................................................................................................................................................................................................2011.001000000000100000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................AGGTGCGCGTTAAGCCCGAAAAAA............................2411.001000000000000000000000010000000000000000000000000000000000000000
.....................TAAAGCGTGTGATCGACTATGCC.............................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...............TTGGTGTAAAGCGTGTGATCG.....................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........GTTTTGGTTGGTGTAAAGCGT............................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............TGGTTGGTGTAAAGCGTGTGA........................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................AATGGCGTTGTTACCCAAGGTGTTAAGC.2811.001000000000000000000000000000000000000000000000000000000000000010
..................................................GTAAGTGTATG-----------------------------GAAGAA-TCGT....................................................................................................................................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
.GGCTCGTGTTTTGGTTGGT.....................................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
...............TTGGTGTAAAGCGTGTGATCGAC...................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
..................................CGACTATGCCGTTAAGGTG....................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..................GTGTAAAGCGTGTGATCGACT..................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.................GGTGTAAAGCGTGTGATCGA....................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................GTGCGCGTTAAGCCCGAAAAA.............................2111.001000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TTGTTACCCAAGGTGTTAA...1911.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TGGCGTTGTTACCCAAGGTGTTAAGC.2611.001000000001000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................AATGGCGTTGTTACCCAAGGT........2111.001000000000000000001000000000000000000000000000000000000000000000
.................GGTGTAAAGCGTGTGATCGACT..................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................ATCACTTGTTGCG---------CTTCGT...................................................................................................................................................1911.001000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................................................................................................................................................................GTTAAGCCCGAAAAAAATG.........................1911.001001000000000000000000000000000000000000000000000000000000000000
..................GTGTAAAGCGTGTGATCGACTATG...............................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
..................................CGACTATGCCGTTAAGGTGC...................................................................................................................................................................................................................................................................2020.501000000000000000000000100000000000000000000000000000000000000000
droMoj3
TGGCTCGTGTTTTGGTTGGTGTAAAGCGTGTGATCGACTATGCCGTTAAGGTGAGT-----------------------------------AAATT-TAGTA-----TGGATCTCCGTTAG----ATTCTTC-TTCTTATCACTTGTTGCG---------CTTCGTTTTGCGTAATCGTTTTTATTAT--TC-----------TTAATTAAATATCTT----------CCGATTG---GA------------ACTT-GTGTAGGTGCGCGTGAAGCCGGAGAAAAATGGCGTTGTTACTCAAGGTGTTAAACASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................TGGTGTAAAGCGTGTGATCGA....................................................................................................................................................................................................................................................................................2111.001000001
.............................................................................................................................................................................................................................................................................................ATGGCGTTGTTACTCAAGGT........2011.001000100
........................................................................................................................................................................................................................................TTG---GA------------ACTT-GTGTAGGTGCGC............................................2111.001000001
.....................................................................................................................................................................................................................................................................................GGAGAAAAATGGCGTTGTTACT..............2211.001000010
..GCTCGTGTTTTGGTTGGTGTA..................................................................................................................................................................................................................................................................................................2111.001001000
TGGCTCGTGTTTTGGTTGG......................................................................................................................................................................................................................................................................................................1911.001100000
.........................GCGTGTGATCGACTATGCCGT...........................................................................................................................................................................................................................................................................2111.001000001
...........TTGGTTGGTGTAAAGCGTGTGATCGAC...................................................................................................................................................................................................................................................................................2711.001000001
.............................................................................................................................................................................................................................................................................................ATGGCGTTGTTACTCAAGGTGTTAAAC.2711.001000001
........GTTTTGGTTGGTGTAAAGCGTGT..........................................................................................................................................................................................................................................................................................2311.001000001
..............GTTGGTGTAAAGCGTGTGAT.......................................................................................................................................................................................................................................................................................2011.001000001
...........................GTGTGATCGACTATGCCGT...........................................................................................................................................................................................................................................................................1911.001000001
...........................................................................................................................................................................................................................................................................................AAATGGCGTTGTTACTCAAGGT........2211.001100000
TGGCTCGTGTTTTGGTTGGTGT...................................................................................................................................................................................................................................................................................................2211.001000001
........GTTTTGGTTGGTGTAAAGCGTGTGATC......................................................................................................................................................................................................................................................................................2711.001000001
droGri2
TGGCTCGTGTTTTGGTTGGAGTAAAGCGTGTTATCGACTATGCCGTCAAGGTGAGCATATC----------ACAAATATAGAGAAAGAATGAAGAA-TTGCCTGTTGC---------------------TTC-CTCTTATCACTTGTTGAG---------CTTCGGTTTGCGTAATACTTATTATT-----TTTGTTTTATTACCAATT-AAGTAATT----------TCTTATG---TTGTTC--------CGTTAATTTAGGTGCGCGTTAAGCCCGAGAAAAATGGTGTTGTCACCCAGGGCGTGAAACASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................................................................................................................................................................................................................................................................................CGAGAAAAATGGTGTTGTCA................2011.00110
...........TTGGTTGGAGTAAAGCGTG...........................................................................................................................................................................................................................................................................................1911.00110
................................................................................................................................................................................................................................................................................................GTGTTGTCACCCAGGGCGTGAAACA2511.00110
...............TTGGAGTAAAGCGTGTTATCG.....................................................................................................................................................................................................................................................................................2111.00101
..GCTCGTGTTTTGGTTGGA.....................................................................................................................................................................................................................................................................................................1811.00110
.....CGTGTTTTGGTTGGAGTAAAGCG.............................................................................................................................................................................................................................................................................................2311.00101
............TGGTTGGAGTAAAGCGTGTTATCG.....................................................................................................................................................................................................................................................................................2411.00110
.......................AAGCGTGTTATCGACTATGCCG............................................................................................................................................................................................................................................................................2211.00110

Generated: 05/19/2015 at 05:28 AM