ID:

dsi_9524

 Coordinate:

3r:18984434-18984676 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-80.5 -80.5 -80.4

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TTTGATTTTCTCACTGGCAACATGGATCGTCATCATTACGAGACATTCAAGTGAGTAGCATTGGAGTATGGGTGGTATTGGCTATATGGGGCTAAGCCAAGCGGAGGGCGGCACACTGCTGTCTATGTCTGCGTCTGGGTGTAGTGTGTATCTATGTCCTTGGCATGGCAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCTTCGTATCCTCGGTCTGCCTTTGGCACGTTACGTATGCGCCCTGTGTGCGCCTAAGCGCCTGCATTTGCCAGGGATATGCCAGCACCTGCATGCCAAGCAGCGGCCAATGCCGATGCCGATG
**************************************************((((((.(((..((.((.((((((...((((((......))))))((((.((.((((((((((((((((..((((..........)))).))))))))).....))))))).)).))))............(((.......)))((((((.(((......(((.....)))..(((((...((...((((...))))))....))))).))).)))))))))))).)).)))))))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 M053
female body
 M023
head
 SRR902009
testis
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
............ACTGGCAACATGGATCGTCATC..................................................................................................................................................................................................................................................................................................................... 22 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0
............ACTGGCAACATGGATCGTCAT...................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
................GCAACATGGATCGTCATCATTACGA.............................................................................................................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................GCAACATGGATCGGCATCATTACGAGA............................................................................................................................................................................................................................................................................................................ 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................CGTCATCATTACGAGACATTCAAGTGA................................................................................................................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....................CATGGATCGTCATCATTACGA.............................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................AGCCAAGCGGAGGGCGGCACACTGCT............................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................CAACATGGATCGTCATCATTACGAGAC........................................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................GCCTAAGCGCCTGCATTTGCCAGGGA............................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...........CACTGGCAACATGGATCGT......................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................ACACTGCTGTCTATGTCTG.................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................................TGGGGCGTAGCCAAGCGG............................................................................................................................................................................................................................................... 18 2 6 0.33 2 0 0 1 0 0 0 1 0 0 0
..........................................................................................................................................................................................................................................................................................GCATTTGCCAAGGAT.............................................. 15 1 20 0.30 6 0 0 0 0 0 0 4 0 0 2
..................................................................................................................................................................................................CACACCTGGCTGTGATGGCT................................................................................................................................. 20 3 7 0.14 1 0 0 0 0 0 0 0 0 1 0
........................................................................................................AGGGCGGGACACTGC................................................................................................................................................................................................................................ 15 1 7 0.14 1 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................................................................................................................................................GGCCAATGCCGATGTCGG.. 18 2 13 0.08 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................AGCATTTGCCAAGGATAT............................................ 18 2 13 0.08 1 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................ATGTCCTTGGCATGGAA............................................................................................................................................................................. 17 1 17 0.06 1 0 0 0 0 0 0 0 1 0 0
...........................CGTCGGCATTACGAGA............................................................................................................................................................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0
..................................................................TATGTGTGGTATTGGGT.................................................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

AAACTAAAAGAGTGACCGTTGTACCTAGCAGTAGTAATGCTCTGTAAGTTCACTCATCGTAACCTCATACCCACCATAACCGATATACCCCGATTCGGTTCGCCTCCCGCCGTGTGACGACAGATACAGACGCAGACCCACATCACACATAGATACAGGAACCGTACCGTTGATTACGCTAGCCAAATAAAGGCGTGTGTACCGAAACAACCGAAGGACGGAAGCATAGGAGCCAGACGGAAACCGTGCAATGCATACGCGGGACACACGCGGATTCGCGGACGTAAACGGTCCCTATACGGTCGTGGACGTACGGTTCGTCGCCGGTTACGGCTACGGCTAC
**************************************************((((((.(((..((.((.((((((...((((((......))))))((((.((.((((((((((((((((..((((..........)))).))))))))).....))))))).)).))))............(((.......)))((((((.(((......(((.....)))..(((((...((...((((...))))))....))))).))).)))))))))))).)).)))))))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total O002
Head
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M024
male body
.............................................................................................................................................................................................AAGGCGTGTGTACCGAAAC....................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................................................AACCGTACAAGGGATACGCGG................................................................................. 21 3 3 0.33 1 0 1 0 0 0
..................................................................................................................................................................................................................................................................................................................GGACGTACGGTACGTC..................... 16 1 5 0.20 1 0 0 0 1 0
........................................................................................................................................................................................................................................CCAAAGGGAAGCCGTGCAAT........................................................................................... 20 3 8 0.13 1 0 0 1 0 0
...............................................................................................................................................................................ACGCTAGCGAAATCAAG....................................................................................................................................................... 17 2 20 0.05 1 0 0 1 0 0
...............................................................................................................................................................................................................................................................................GAATTCGCGGTCGTAAA....................................................... 17 2 20 0.05 1 0 0 1 0 0
...............CGGTTGAACCTAGTAGTAG..................................................................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1
.................GTTGAACCTAGTAGTAGCA................................................................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:18984384-18984726 - dsi_9524 TTTGATTTTCTCACTGGCAACATGGATCGTCATCATTACGAGACATTCAAGTGAGTAGCATTGGAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGTGGTATTGGCTATATGGGGCTAAGCCAAGCGGAGGGCGGCACACTGCTGTCTA-T--------------------------------------------------------------------------------------------------GTCTG----C---GTCTGGGTGT--AGTGTGTATC---TATGTCCTTGGCATG-GCAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCTTCG-----TA---T-----------------------------C---CT--CGGTCTGCCTTTGGCAC-------------------------------GTTACGTATGCGCCCTGTGTGCG------------------------------C--------------CTAAGCGCCTGCATTTGCCAGGGATATGCCAGCACCTGCATGCCAAGCAG--CGG-------------------------CCAA------------------------------------------------TGCCG--ATGCCGATG----
droSec2 scaffold_0:19791512-19791854 - TTTGATTTTCTCACTGGCAACATGGATCGTCATCATTACGAGACATTCAAGTGAGTAGCATTGGAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGTGGTATTGGCTATATGCGGCTAAGCCAAGCGGAGGGCGGCGCACTGCTGTCTA-T--------------------------------------------------------------------------------------------------GTCTG----C---GTCTGGGTGT--AGTGTGTATC---TATGTCCTTGGCATG-GTAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCTTCG-----TA---T-----------------------------C---CT--CGGTCTGCCTTTGGCAC-------------------------------GTTACGTATGCGCCTTGTGTGCG------------------------------C--------------CTAAGCGCCTGCATTTGCCAGGGATATGCCAGCACCTGCATGCCAAGCAG--CCG-------------------------CCAA------------------------------------------------TGCCG--ATGCCGATG----
dm3 chr3R:19433796-19434140 - TTTGATTTTCTCACTGGCAACATGGATCGTCATCATTACGAGACATTCAAGTGAGTAGTATTGGAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGTGGTATTGGCTAAATAGGGCTAAGCCAAGCGGAGGGGGCCACACGTCTGTCTA-T--------------------------------------------------------------------------------------------------GTCTG----C---GTCTGGGTGTGCAGTGTGTATC---TATGTCCTTGGCATG-GTAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCTTCA-----TCGGTT-----------------------------C---CT--CGGTCTGACTTTGGCAC-------------------------------GTTACGTATGCGCCCTGTGTGCG------------------------------C--------------CTAAGCGCCTGCATTTGCCAGGGATATGCCAGCACCTGCATGCCAAGCAG--CCG-------------------------CCAA------------------------------------------------TGCCG--ATGCC---G----
droEre2 scaffold_4820:8611628-8612016 + TTTGATTTCCTCACTGGCAACATGGATCGTCATCATTACGAGACATTCAAGTGAGTAGTATTAAGGTATTGGC---GAGCGGCA---------------TTGGCCAATAGGCAATGGGCTGT---------------------------------------GTGGGCTTAAGCCGGATGTGGGGATGTGGGGA-------------------TAGGTCTG-------------------------------------------------------------------------------------------------------TGTCTG-T--------------------------------------------------------------------------------------------------GTGTG----CGCTGTCTGGGTGC--CGTGTGTATC---CATGTCCTTGGCATG-GTAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCTTCG-----CA---T-----------------------------C---CT--CGGTCTGCCTTTGGCAC-------------------------------GTTACGTATGCGCCCCGTGTGCG------------------------------C--------------CTAAGCGCCTGCATTTGCCAGGGATATGCCAGCACCTGCATGCCAAGCAG--CCG-------------------------CCAATGCTGGTGCTGCTGCTGAT------------------------------GCTG--ATGCCGATG----
droYak3 3R:20327337-20327746 - TTTGATTTCCTCACTGGCAACATGGATCGTCATCATTACGAGACATTCAAGTGAGTAGTATTATGGTATTGGC---GTGGG----------------------CCAGTGGGCAATGGGCCAT---------------------------------------GTAGTTTTAAGCCGGATGTGG-GATGTGGGGC--A--------C-------TGCGTCTG-------------------------------------------------------------------------------------------------------TGCCTG-T--------------------------------------------------------------------------------------------------GTCTG----C---GTCTGGGTAC--AGTGTGTATC---TATGTCCTTGGCATG-GTAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCTTCG-----TA---T-----------------------------C---CT--CGCTCTGCCTTTGGCAC-------------------------------GTTACGTATGCGCCCCGTGTGCG------------------------------C--------------CTAAGCGCCTGCATTTGCCAGGGATATGCCAGCACCTGCATGCCAAGCAG--CCG-------------------------CCAATGCTGATGGTGATGGTGATGCTGAAGGTGAAGCCGATGCTGAAGCCAATGCCA--ATGCCGATG----
droEug1 scf7180000409798:971415-971753 + TTTGATTTTCTCACTGGCAACATGGATCGTCATCATTACGAGACATTCAAGTGAGTATTG---G-GTATTGGATGGGT-------T-----------GAGGG--AC-------ACGGGCTCT-TC-------------------------------------AAGGGTTAAGCCGGATGT-----------------------------AGT-----------------------------------------------------------G-------------------------------------------CACACTGCCTCCC-CTCGAAGGGGGTGGGAGG----------GTA------------------------------------------------------------------------------------------------TGTGTA-----TGTGTCCTTGGCATG-GTAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCTCCG-----TA---T-----------------------------C---CTTTCGGTCTGCCTTTGGCAC-------------------------------GTTACGTATGCGCCCCGTGTGCG------------------------------C--------------CTAAGCGCCAGCATTTGCCAGGGATATGCCAGCACCTGCATGCCAAGCAG--CAG-------------------------CC-----------------------------------------------------------GCCGATG----
droBia1 scf7180000302075:4970238-4970565 - TTTGATTTTCTCACCGGCAACATGGATCGCCATCATTACGAGACATTCAAGTGAGTATTG---G--------G-----------------------------------------CGGGCACT-CAGA----------------------------------GGGGGGTTAAGCCGGATGTGG----------------------------G-TGGG------------------------------------------------------------------------------------------------------------------T--------------GGTTCTCGATACGTATGTCTGT--------------------------------------------------------------GTATG----C-----------------CGTGTATC---TGGGTCCTCGGCATG-GTAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTAGCTTCCTGCCGCCG-----TA---T-----------------------------C---CT-TCGGTCTGCCTTTGGCAC-------------------------------GTTACGTATGCGCCCCGTGTGCG------------------------------C--------------CTAAGCGCCTGCATTTGCCAGGGATATGCCAGCACCTGAATGTCAAGCAGACCCG-------------------------GCAG------------------------------------------------CCCCA--GAGCC---G----
droTak1 scf7180000415765:1506940-1507249 + TTTGATTTTCTCACTGGCAACATGGATCGTCATCATTACGAGACATTCAAGTGAGTATAT---A----TTGGG-----------------------------------------TGGCCACT---------------------------------------GTGGGGTTAAGCCGGATGT--------------------------------------------------------------------------------------------------------------------------------------------------CGG-T--------------------------------------------------------------------------------------------------GTGTG----T---GTGTGGGTGC----TGTGTATC---TGGGTCCCTGGCATG-GTAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCGCCG-----TA---T-----------------------------C---CT--CGGTCTGCCTTTGGCAC-------------------------------GTTACGTATGCGCCCCGTGTGCG------------------------------C--------------CTAAGCGCCTGCATTTGCCGGGGATATGCCAGCACCTGCATGCCAAGCAG--CCAAACA--------------------------------------------------------------------------GCCGTGTAGCC---G----
droEle1 scf7180000491261:134698-135093 + TTTGATTTTCTCACTGGCAACATGGATCGTCATCATTACGAGACGTTCAAGTGAGTATTG---G--------G---GCGAGGCA------------------------GGACTACGGGCCCT---------------------------------------AAGGGGTTAAGCCGGATGTGC-GA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG----T---GTGTGGGTGT--A-AGTGTCTA---TATGTCCTTGGCAGG-GTAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCTGCG-----TC---T-----------------------------C---CT--TGGTCTGCCTTTGGCGC-------------------------------GTTACGTATGCGCCCCGTGTGCT------------------------------C--------------CTAAGCACCTGCATTTGCCAGGGATATGCCAGCACCTGCATGGCAAGCAG--CCA-------------------------GCCA------------------------------------------------AGCCAACCAGCC---G----
droRho1 scf7180000777784:69446-69748 + TTTGATTTTCTCACTGGCAACATGGATCGTCATCATTACGAGACATTCAAGTGAGTATTG---T---------------------------------G---GGTGC-------ACGGGCACT---------------------------------------GTGGGGTTAAGCCGGATGTGC-GATG---------------------------------------------------------------------------------------------------------------------------------------------G-T--------------------------------------------------------------------------------------------------GTATG----C---GTCT-----------GTGTATC--GTGTGTCCTTGGCATG-GTAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCTGTG-----TC---T-----------------------------C---CT--TAGTCTGTCTTTGGCGC-------------------------------GTTACGTATGCGCCCCGTGTGCG------------------------------C--------------CTAAGCGCCTGCATTTGCCAGGGATATGCCAGCACCTGCATGCCAAGCAG--CCAACCA--------------------GCCAA--------------------------------------------------------------------
droFic1 scf7180000453906:382815-383186 + TTTGATTTTCTCACTGGCAACATGGATCGTCATCATTACGAGACATTCAAGTGAGTATGG---G--------G------------GAGATACTATGGG---GGGG-------------------CAA-----------------C----------------------------------TGGGAATGTGGGGATTACTCCCCGGATGCGAGT-----------------------------------------------------------G-------------------------------------------CACACGGC-------------------------------------------------------------------------------------------------------------------------------------TGTGTATC---CGAGTCCTTGGCATC-GTAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCGACTGACGACT---GCCGCCTGCCGCCTGCGTCT--CTCCGCATCTC-----------GCCATTGGCACTTT---------------------ATGTTACGTTACGTATGCGCCCCGTGTGCG------------------------------C--------------CTAAGCGCCTGCATTTGCCATGGATATGCCAGCACCTGCATGCCAAACAG--CCAGCCAGCCAGCCAACCAACCAAGCAGCCAA---------------------------------------------------------------G----
droKik1 scf7180000302639:3149759-3150042 + TTTGATTTTCTTACTGGCAACATGGATCGTCATCATTACGAGACATTCAAGTGAGTATTG---G--------------------------------------------------------------------------------------------------TCGGGCTGAGCCGGATGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG----C---ACCTGGG---------TGGCTC---CATGTCCTTGGCAGG-GCAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCGCCG-----CCGGCA-----------------------------C---GT--TGCGCTGCCTT----AC-------------------------------GTTACGTATGCGCCCCGTGTGCG------------------------------C--------------CTAAGCGCCTGCATTTGCCAGGGATATGCCAGTACCTGCATGCCAAGCAG--CCG-------------------------CCGT------------------------------------------------TTCA--------GATTTGGG
droAna3 scaffold_13340:20100119-20100494 + dan_3184 TTTGATTTTCTCACTGGCAACATGGATCGCCATCATTACGAGACATTCAAGTGAGTATTG---GGGTGTGG------------------------------------------------GCT-----GTACATGTATGTATGAAGGTGTGTTGTGCCCACTTTTGGCATAAGCCGGATATGT----------------------------G-TAGG------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------GTGTGTGTGT---GTGTGG-------------CA---GGGTGTCCTTGGCATG-GAAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTCGTTGGCTTCCTGCCTCCT--------------CGCAGT--------------------G---CT--CCGTCTGCTTTTAGCACATTGAGCTTGGCTGGCGTTGCGATACGTAATGTTACGTATGCGCCCCGTGTGCT------------------------------CCCCCGGCCGGCTGGCTAAGCGCTTGCATTTGCCAGGGATATGCCAGCACCTGCATGTCAAGCAG--CCG--CA---------------------------------------------------------------------------------------TC----
droBip1 scf7180000396413:2295755-2296093 - TTTGATTTTCTCACTGGCAACATGGATCGCCATCATTACGAGACATTCAAGTGAGTATGG---G--------T----------------------------------------------------------------------------GTTTTGCGCACTTTTGGCCTAAGCCGGATATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGCGTGT---GTGTGGCAGC--A-----------GGGTGTCCTTGGCATG-GAAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCTCCT----------GCCTCGCAGT--------------------G---CT--CCGTCTGCTTTTAGCACATTGAGTTTGGCTGGCGTTGCGATACGTAATGTTACGTATGCGCCCCGTGTGCA------------------------------CCCCCG----GCTGGCTAAGCGCCTGCATTTGCCAGGGATATGCCAGCACCTGCATGCCAAGCAG--CCA--CA----------------------------------------------------------------------------------------G----
dp5 2:2925951-2926288 - dps_322 TTTGATTTCCTCACTGGCAACATGGATCGTCATCATTATGAGACCTTCAAGTGAGTATAT---G--------G----CG-----GGGTATCCTTTTTG---GGGG-------------------AAA-----------------GGGAAGTTGTGGTGGGT-TGGGGCTTAGCTGGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGGA-------------T---GGCTGTCCTTGGCATG-GCAACTAATGCGATCGGTTTATTTCCGCACACATGGCTCCGTTGGCTTCCTGCCTC-G-----CT---GCCTCTCACTGTCTGGTCCTGGCTCTGGCTCTGGCT--ATGGCTGCTTTTAGCAC-------------------------------GTTACGTATACGCCTCATATGCG--------------------------GCCGC--------------CTAAGCGCATGCATTTGGCAAGGATATGCCTGCACCTGCATGCCAAACAG--CAA--CA----------------------------------------------------------------------------------------G----
droPer2 scaffold_7:1423357-1423693 + TTTGATTTCCTCACTGGCAACATGGATCGTCATCATTATGAGACCTTCAAGTGAGTATAT---G--------G----CG-----GGGTATCCTTTTTG---GGGG-------------------AAA-----------------GGGAAGTTGTGGTGGGT-TGGGGCTTAGCTGGATA--------------------------------------------------------------------------------------------G-------------------------------------------CACATG--------------------------------------------------------------------------------------------------------------------------------------------------ACTGTCCTTGGCATG-GCAACTAATGCGATCGGTTTATTTCCGCACACATGGCTCCGTTGGCTTCCTGCCTC-G-----CT---GCCTCTCACTGTCTGGTTCTGGCTCTGGCTCTGGCT--ATGGCTGCTTTTAGCAC-------------------------------GTTACGTATACGCCTCATATGCG--------------------------GCCGC--------------CTAAGCGCATGCATTTGGCAAGGATATGCCTGCACCTGCATGCCAAACAG--CAA--CA----------------------------------------------------------------------------------------G----
droWil2 scf2_1100000004943:5480456-5480815 - TTCGATTTTCTAACTGGCAACATGGATCGTCATCATTACGAGACTTTCAAGTGAGTATTA---TG-------A----CCAAGGA-----------------------------------------------------------------------------GAGGGGCTTA------TATAC----------------------A-------TGCATATGTACATACATATATACATATGAATGAATGAATGCATAAATGAGTAGATGGGC--------------------------------------------CACACTCACACCA-CTACAAGTG--------------------------------------------------------------------------------------------------------------------------------GTGTGTCCTTGGCAGGCGCAACTAATGCGATCGGTTTATTTCCGCACAAATGGCTTTGTTGGCTTCATGCCTGCA------------------------------------------------------AGCTTTAGCAT-------------------------------GTTACTTACACAACCCGTCCCCAACGCGTTCTAACTCGTCCCATATG------C-------------------AGCATGCATTTGGCAGGGATATGCG-------GCAGGAACAGCAG--GAG-------------------------CCTT------------------------------------------------AGCCA--CAGCCACTG----
droVir3 scaffold_13047:9035783-9036029 - TTTGATTTTCTCACTGGCAACATGGATCGTCACCATTATGAGACCTTTAAGTGAGTATGG---G--------C------------G-----------GAGGG---------CTCCTCGGCTTCAC--------------------------------------------AAGTGGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAGGCGTA-TGACCTAATGCGATTGGCTTATTTCCGCATAAATGCCGTTGTTGGCTTCTTGCCTACA-----ATGC---------------G--------GC-------------------------TACGC-------------------------------GTTACGTATACGCTTTATATCCGCTTCACTGCT------------------------------GCTGG------TTCTATATTTGGTAAGGGTG---CTGCAC-AGCATTCT---------------------------------------------------------------------------------------------------CAACG----
droMoj3 scaffold_6540:31616942-31617214 + TTTGACTTTCTCACTGGGAACATGGATCGGCATCATTACGAGACTTTCAAGTGAGTATAA---A-GTGTGG------------------------------------------------ACT---------------------------------------GTGGAGTG-------------------------------------------------------------------------------------------------------TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCGATTTTGGCCAG-AGACATAATGCGATTGGCTTATTTCCGCATAACTGGCGTTGTTGGCTTCATGCCTACC----------G---------------------------------------CCGTGTGGGTAGCGC-------------------------------ATTACGTATACGTATCCCATACGCTTCAC-----TTCATC-----TGGGGCTGC--------------TGCTGTCTCTATATTTGGCAAGGCTG---CCGCAC-AGCATGCTCAACGG--CAG--GA--------------------GCCAA------------------------------------------------TGCC----------------
droGri2 scaffold_14906:4211457-4211702 + TTTGATTTTCTTACCGGCAACATGGATCGTCATCATTACGAGACGTTCAAGTGAGTATTG---A-T----------------------------------TGGTCC--------------------------------------------------------------------AC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATG----C---GACTGGATG---AGTGTGCATAAAACGAATTTTTGGCAAG-CT--------GGATTGGTTTATTTCCGCATAAATGGCGTTGTTGGCTTCATGCCTACC-----ATGT---------------G--------GCTGCATGTG-----------AGCATGTGAGC-------------------------------TTTAATGATGCAGCTGCTGCG-G------------------------------T--------------CTCAGCGCCCATATTTGGCA-----------GCATTTGAA---------------------------------------------------------------------------------------------------------ATGCTCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTTGATTTTCTCACTGGCAACATGGATCGTCATCATTACGAGACATTCAAGTGAGTAGCATTGGAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGTGGTATTGGCTATATGGGGCTAAGCCAAGCGGAGGGCGGCACACTGCTGTCTA-T--------------------------------------------------------------------------------------------------GTCTG----C---GTCTGGGTGT--AGTGTGTATC---TATGTCCTTGGCATG-GCAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCTTCG-----TA---T-----------------------------C---CT--CGGTCTGCCTTTGGCAC-------------------------------GTTACGTATGCGCCCTGTGTGCG------------------------------C--------------CTAAGCGCCTGCATTTGCCAGGGATATGCCAGCACCTGCATGCCAAGCAG--CGG-------------------------CCAA------------------------------------------------TGCCG--ATGCCGATG----SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............ACTGGCAACATGGATCGTCATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00220000000000000000
............ACTGGCAACATGGATCGTCAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
................GCAACATGGATCGTCATCATTACGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
...........................CGTCATCATTACGAGACATTCAAGTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
....................CATGGATCGTCATCATTACGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
..........................................................................................................................................................................................................................................................................................................AGCCAAGCGGAGGGCGGCACACTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
.................CAACATGGATCGTCATCATTACGAGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------------------C--------------CTAAGCGCCTGCATTTGCCAGGGA................................................................................................................................2611.00100000000000100000
...........CACTGGCAACATGGATCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
............................................................................................................................................................................................................................................................................................................................ACACTGCTGTCTA-T--------------------------------------------------------------------------------------------------GTCTG----...................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
droSec2
TTTGATTTTCTCACTGGCAACATGGATCGTCATCATTACGAGACATTCAAGTGAGTAGCATTGGAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGTGGTATTGGCTATATGCGGCTAAGCCAAGCGGAGGGCGGCGCACTGCTGTCTA-T--------------------------------------------------------------------------------------------------GTCTG----C---GTCTGGGTGT--AGTGTGTATC---TATGTCCTTGGCATG-GTAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCTTCG-----TA---T-----------------------------C---CT--CGGTCTGCCTTTGGCAC-------------------------------GTTACGTATGCGCCTTGTGTGCG------------------------------C--------------CTAAGCGCCTGCATTTGCCAGGGATATGCCAGCACCTGCATGCCAAGCAG--CCG-------------------------CCAA------------------------------------------------TGCCG--ATGCCGATG----SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTG----C---GTCTGGGTGT--AGTGTA.............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
.....................ATGGATCGTCATCATTACGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
........................................................................................................................................................................................................................................................................................................................................A-T--------------------------------------------------------------------------------------------------GTCTG----C---GTCTGGGTGT--AGT................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...................ACATGGATCGTCATCATTACGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001
dm3
TTTGATTTTCTCACTGGCAACATGGATCGTCATCATTACGAGACATTCAAGTGAGTAGTATTGGAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGTGGTATTGGCTAAATAGGGCTAAGCCAAGCGGAGGGGGCCACACGTCTGTCTA-T--------------------------------------------------------------------------------------------------GTCTG----C---GTCTGGGTGTGCAGTGTGTATC---TATGTCCTTGGCATG-GTAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCTTCA-----TCGGTT-----------------------------C---CT--CGGTCTGACTTTGGCAC-------------------------------GTTACGTATGCGCCCTGTGTGCG------------------------------C--------------CTAAGCGCCTGCATTTGCCAGGGATATGCCAGCACCTGCATGCCAAGCAG--CCG-------------------------CCAA------------------------------------------------TGCCG--ATGCC---G----SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........CACTGGCAACATGGATCGTCATCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-GTAACTAATGCGATCGGTTTAT................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GATTTTCTCACTGGCAACATGGATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TAGGGCTAAGCCAAGCGGAGGGGGCCACAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATGGATCGTCATCATTACGAGACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................GAGTAGTATTGGAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................ATAGGGCTAAGCCAAGCGGAGGGGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................GTGAGTAGTATTGGAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGACTTTGGCAC-------------------------------GTTACGTATG..................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTGCCTTCA-----TCGGTT-----------------------------C---CT--CGGTCT......................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..................................................................................................................................................................................................................................................................................................TAGGGCTAAGCCAAGCGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................GTGAGTAGTATTGGAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
TTTGATTTTCTCACTGGCAACATGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TCACTGGCAACATGGATCGTCATCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATG-GTAACTAATGCGATCGG.....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GCAACATGGATCGTCATCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........CTCACTGGCAACATGGATCGTCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.................................CATTACGAGACATTCAAGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droEre2
TTTGATTTCCTCACTGGCAACATGGATCGTCATCATTACGAGACATTCAAGTGAGTAGTATTAAGGTATTGGC---GAGCGGCA---------------TTGGCCAATAGGCAATGGGCTGT---------------------------------------GTGGGCTTAAGCCGGATGTGGGGATGTGGGGA-------------------TAGGTCTG-------------------------------------------------------------------------------------------------------TGTCTG-T--------------------------------------------------------------------------------------------------GTGTG----CGCTGTCTGGGTGC--CGTGTGTATC---CATGTCCTTGGCATG-GTAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCTTCG-----CA---T-----------------------------C---CT--CGGTCTGCCTTTGGCAC-------------------------------GTTACGTATGCGCCCCGTGTGCG------------------------------C--------------CTAAGCGCCTGCATTTGCCAGGGATATGCCAGCACCTGCATGCCAAGCAG--CCG-------------------------CCAATGCTGGTGCTGCTGCTGAT------------------------------GCTG--ATGCCGATG----SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................TGGATCGTCATCATTACGAGACATTCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000002
...............GGCAACATGGATCGTCATCATTAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
............ACTGGCAACATGGATCGTCATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
..............................CATCATTACGAGACATTCAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
...............................ATCATTACGAGACATTCAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
......................TGGATCGTCATCATTACGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
..........................................................................................................ATAGGCAATGGGCTGT---------------------------------------GTGGGCTTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
droYak3
TTTGATTTCCTCACTGGCAACATGGATCGTCATCATTACGAGACATTCAAGTGAGTAGTATTATGGTATTGGC---GTGGG----------------------CCAGTGGGCAATGGGCCAT---------------------------------------GTAGTTTTAAGCCGGATGTGG-GATGTGGGGC--A--------C-------TGCGTCTG-------------------------------------------------------------------------------------------------------TGCCTG-T--------------------------------------------------------------------------------------------------GTCTG----C---GTCTGGGTAC--AGTGTGTATC---TATGTCCTTGGCATG-GTAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCTTCG-----TA---T-----------------------------C---CT--CGCTCTGCCTTTGGCAC-------------------------------GTTACGTATGCGCCCCGTGTGCG------------------------------C--------------CTAAGCGCCTGCATTTGCCAGGGATATGCCAGCACCTGCATGCCAAGCAG--CCG-------------------------CCAATGCTGATGGTGATGGTGATGCTGAAGGTGAAGCCGATGCTGAAGCCAATGCCA--ATGCCGATG----SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................ATCATTACGAGACATTCAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.......TCCTCACTGGCAACATGGATCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
..............................CATCATTACGAGACATTCAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCCTTCG-----TA---T-----------------------------C---CT--CGCTCC......................................................................................................................................................................................................................................................................2211.00100100000000
.....................ATGGATCGTCATCATTACGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..................AACATGGATCGTCATCATTACGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
droEug1
TTTGATTTTCTCACTGGCAACATGGATCGTCATCATTACGAGACATTCAAGTGAGTATTG---G-GTATTGGATGGGT-------T-----------GAGGG--AC-------ACGGGCTCT-TC-------------------------------------AAGGGTTAAGCCGGATGT-----------------------------AGT-----------------------------------------------------------G-------------------------------------------CACACTGCCTCCC-CTCGAAGGGGGTGGGAGG----------GTA------------------------------------------------------------------------------------------------TGTGTA-----TGTGTCCTTGGCATG-GTAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCTCCG-----TA---T-----------------------------C---CTTTCGGTCTGCCTTTGGCAC-------------------------------GTTACGTATGCGCCCCGTGTGCG------------------------------C--------------CTAAGCGCCAGCATTTGCCAGGGATATGCCAGCACCTGCATGCCAAGCAG--CAG-------------------------CC-----------------------------------------------------------GCCGATG----SizeHit CountTotal NormTotal
No Reads
droBia1
TTTGATTTTCTCACCGGCAACATGGATCGCCATCATTACGAGACATTCAAGTGAGTATTG---G--------G-----------------------------------------CGGGCACT-CAGA----------------------------------GGGGGGTTAAGCCGGATGTGG----------------------------G-TGGG------------------------------------------------------------------------------------------------------------------T--------------GGTTCTCGATACGTATGTCTGT--------------------------------------------------------------GTATG----C-----------------CGTGTATC---TGGGTCCTCGGCATG-GTAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTAGCTTCCTGCCGCCG-----TA---T-----------------------------C---CT-TCGGTCTGCCTTTGGCAC-------------------------------GTTACGTATGCGCCCCGTGTGCG------------------------------C--------------CTAAGCGCCTGCATTTGCCAGGGATATGCCAGCACCTGAATGTCAAGCAGACCCG-------------------------GCAG------------------------------------------------CCCCA--GAGCC---G----SizeHit CountTotal NormTotal
No Reads
droTak1
TTTGATTTTCTCACTGGCAACATGGATCGTCATCATTACGAGACATTCAAGTGAGTATAT---A----TTGGG-----------------------------------------TGGCCACT---------------------------------------GTGGGGTTAAGCCGGATGT--------------------------------------------------------------------------------------------------------------------------------------------------CGG-T--------------------------------------------------------------------------------------------------GTGTG----T---GTGTGGGTGC----TGTGTATC---TGGGTCCCTGGCATG-GTAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCGCCG-----TA---T-----------------------------C---CT--CGGTCTGCCTTTGGCAC-------------------------------GTTACGTATGCGCCCCGTGTGCG------------------------------C--------------CTAAGCGCCTGCATTTGCCGGGGATATGCCAGCACCTGCATGCCAAGCAG--CCAAACA--------------------------------------------------------------------------GCCGTGTAGCC---G----SizeHit CountTotal NormTotal
No Reads
droEle1
TTTGATTTTCTCACTGGCAACATGGATCGTCATCATTACGAGACGTTCAAGTGAGTATTG---G--------G---GCGAGGCA------------------------GGACTACGGGCCCT---------------------------------------AAGGGGTTAAGCCGGATGTGC-GA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG----T---GTGTGGGTGT--A-AGTGTCTA---TATGTCCTTGGCAGG-GTAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCTGCG-----TC---T-----------------------------C---CT--TGGTCTGCCTTTGGCGC-------------------------------GTTACGTATGCGCCCCGTGTGCT------------------------------C--------------CTAAGCACCTGCATTTGCCAGGGATATGCCAGCACCTGCATGGCAAGCAG--CCA-------------------------GCCA------------------------------------------------AGCCAACCAGCC---G----SizeHit CountTotal NormTotal
No Reads
droRho1
TTTGATTTTCTCACTGGCAACATGGATCGTCATCATTACGAGACATTCAAGTGAGTATTG---T---------------------------------G---GGTGC-------ACGGGCACT---------------------------------------GTGGGGTTAAGCCGGATGTGC-GATG---------------------------------------------------------------------------------------------------------------------------------------------G-T--------------------------------------------------------------------------------------------------GTATG----C---GTCT-----------GTGTATC--GTGTGTCCTTGGCATG-GTAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCTGTG-----TC---T-----------------------------C---CT--TAGTCTGTCTTTGGCGC-------------------------------GTTACGTATGCGCCCCGTGTGCG------------------------------C--------------CTAAGCGCCTGCATTTGCCAGGGATATGCCAGCACCTGCATGCCAAGCAG--CCAACCA--------------------GCCAA--------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TTTGATTTTCTCACTGGCAACATGGATCGTCATCATTACGAGACATTCAAGTGAGTATGG---G--------G------------GAGATACTATGGG---GGGG-------------------CAA-----------------C----------------------------------TGGGAATGTGGGGATTACTCCCCGGATGCGAGT-----------------------------------------------------------G-------------------------------------------CACACGGC-------------------------------------------------------------------------------------------------------------------------------------TGTGTATC---CGAGTCCTTGGCATC-GTAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCGACTGACGACT---GCCGCCTGCCGCCTGCGTCT--CTCCGCATCTC-----------GCCATTGGCACTTT---------------------ATGTTACGTTACGTATGCGCCCCGTGTGCG------------------------------C--------------CTAAGCGCCTGCATTTGCCATGGATATGCCAGCACCTGCATGCCAAACAG--CCAGCCAGCCAGCCAACCAACCAAGCAGCCAA---------------------------------------------------------------G----SizeHit CountTotal NormTotal
No Reads
droKik1
TTTGATTTTCTTACTGGCAACATGGATCGTCATCATTACGAGACATTCAAGTGAGTATTG---G--------------------------------------------------------------------------------------------------TCGGGCTGAGCCGGATGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG----C---ACCTGGG---------TGGCTC---CATGTCCTTGGCAGG-GCAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCGCCG-----CCGGCA-----------------------------C---GT--TGCGCTGCCTT----AC-------------------------------GTTACGTATGCGCCCCGTGTGCG------------------------------C--------------CTAAGCGCCTGCATTTGCCAGGGATATGCCAGTACCTGCATGCCAAGCAG--CCG-------------------------CCGT------------------------------------------------TTCA--------GATTTGGGSizeHit CountTotal NormTotal
No Reads
droAna3
TTTGATTTTCTCACTGGCAACATGGATCGCCATCATTACGAGACATTCAAGTGAGTATTG---GGGTGTGG------------------------------------------------GCT-----GTACATGTATGTATGAAGGTGTGTTGTGCCCACTTTTGGCATAAGCCGGATATGT----------------------------G-TAGG------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------GTGTGTGTGT---GTGTGG-------------CA---GGGTGTCCTTGGCATG-GAAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTCGTTGGCTTCCTGCCTCCT--------------CGCAGT--------------------G---CT--CCGTCTGCTTTTAGCACATTGAGCTTGGCTGGCGTTGCGATACGTAATGTTACGTATGCGCCCCGTGTGCT------------------------------CCCCCGGCCGGCTGGCTAAGCGCTTGCATTTGCCAGGGATATGCCAGCACCTGCATGTCAAGCAG--CCG--CA---------------------------------------------------------------------------------------TC----SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................AACATGGATCGCCATCATTACGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
........TCTCACTGGCAACATGGATCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGG-------------CA---GGGTGTCCTTGGC..........................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.........CTCACTGGCAACATGGATCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGG-------------CA---GGGTGTCCTTGG...........................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGCATTTGCCAGGGATATG............................................................................................................................2211.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGCCTCCT--------------CGCAGT--------------------G---CT--CCGTCTG.....................................................................................................................................................................................................................................................................2711.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCTGGCGTTGCGATACG................................................................................................................................................................................................................................2011.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATG-GAAACTAATGCGATCGG.....................................................................................................................................................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................TATGTATGAAGGTGTGTTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCACATTGAGCTTGGCTGGCGT.........................................................................................................................................................................................................................................2411.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACATGGCTTCGTTGGCTTCCTGC.................................................................................................................................................................................................................................................................................................................................2611.001010000
droBip1
TTTGATTTTCTCACTGGCAACATGGATCGCCATCATTACGAGACATTCAAGTGAGTATGG---G--------T----------------------------------------------------------------------------GTTTTGCGCACTTTTGGCCTAAGCCGGATATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGCGTGT---GTGTGGCAGC--A-----------GGGTGTCCTTGGCATG-GAAACTAATGCGATCGGTTTATTTCCGCACACATGGCTTTGTTGGCTTCCTGCCTCCT----------GCCTCGCAGT--------------------G---CT--CCGTCTGCTTTTAGCACATTGAGTTTGGCTGGCGTTGCGATACGTAATGTTACGTATGCGCCCCGTGTGCA------------------------------CCCCCG----GCTGGCTAAGCGCCTGCATTTGCCAGGGATATGCCAGCACCTGCATGCCAAGCAG--CCA--CA----------------------------------------------------------------------------------------G----SizeHit CountTotal NormTotal
No Reads
dp5
TTTGATTTCCTCACTGGCAACATGGATCGTCATCATTATGAGACCTTCAAGTGAGTATAT---G--------G----CG-----GGGTATCCTTTTTG---GGGG-------------------AAA-----------------GGGAAGTTGTGGTGGGT-TGGGGCTTAGCTGGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGGA-------------T---GGCTGTCCTTGGCATG-GCAACTAATGCGATCGGTTTATTTCCGCACACATGGCTCCGTTGGCTTCCTGCCTC-G-----CT---GCCTCTCACTGTCTGGTCCTGGCTCTGGCTCTGGCT--ATGGCTGCTTTTAGCAC-------------------------------GTTACGTATACGCCTCATATGCG--------------------------GCCGC--------------CTAAGCGCATGCATTTGGCAAGGATATGCCTGCACCTGCATGCCAAACAG--CAA--CA----------------------------------------------------------------------------------------G----SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATGCATTTGGCAAGGAT...............................................................................................................................2011.0010100000000
....ATTTCCTCACTGGCAACATGGATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.........CTCACTGGCAACATGGATCGTCATCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGGCTCTGGCTCTGGCT--............................................................................................................................................................................................................................................................................19200.0510100000000
droPer2
TTTGATTTCCTCACTGGCAACATGGATCGTCATCATTATGAGACCTTCAAGTGAGTATAT---G--------G----CG-----GGGTATCCTTTTTG---GGGG-------------------AAA-----------------GGGAAGTTGTGGTGGGT-TGGGGCTTAGCTGGATA--------------------------------------------------------------------------------------------G-------------------------------------------CACATG--------------------------------------------------------------------------------------------------------------------------------------------------ACTGTCCTTGGCATG-GCAACTAATGCGATCGGTTTATTTCCGCACACATGGCTCCGTTGGCTTCCTGCCTC-G-----CT---GCCTCTCACTGTCTGGTTCTGGCTCTGGCTCTGGCT--ATGGCTGCTTTTAGCAC-------------------------------GTTACGTATACGCCTCATATGCG--------------------------GCCGC--------------CTAAGCGCATGCATTTGGCAAGGATATGCCTGCACCTGCATGCCAAACAG--CAA--CA----------------------------------------------------------------------------------------G----SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............ACTGGCAACATGGATCGTCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
...................ACATGGATCGTCATCATTATGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.....................................................................................................................................................GTTGTGGTGGGT-TGGGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1870.292000002
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTCTGGCTCTGGCTCT..................................................................................................................................................................................................................................................................................19200.051010000
droWil2
TTCGATTTTCTAACTGGCAACATGGATCGTCATCATTACGAGACTTTCAAGTGAGTATTA---TG-------A----CCAAGGA-----------------------------------------------------------------------------GAGGGGCTTA------TATAC----------------------A-------TGCATATGTACATACATATATACATATGAATGAATGAATGCATAAATGAGTAGATGGGC--------------------------------------------CACACTCACACCA-CTACAAGTG--------------------------------------------------------------------------------------------------------------------------------GTGTGTCCTTGGCAGGCGCAACTAATGCGATCGGTTTATTTCCGCACAAATGGCTTTGTTGGCTTCATGCCTGCA------------------------------------------------------AGCTTTAGCAT-------------------------------GTTACTTACACAACCCGTCCCCAACGCGTTCTAACTCGTCCCATATG------C-------------------AGCATGCATTTGGCAGGGATATGCG-------GCAGGAACAGCAG--GAG-------------------------CCTT------------------------------------------------AGCCA--CAGCCACTG----SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................AACATGGATCGTCATCATTACGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.........CTAACTGGCAACATGGATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
...............................ATCATTACGAGACTTTCAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...........AACTGGCAACATGGATCGTCATCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000
...........AACTGGCAACATGGATCGTCATCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000
.............CTGGCAACATGGATCGTCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
............ACTGGCAACATGGATCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
droVir3
TTTGATTTTCTCACTGGCAACATGGATCGTCACCATTATGAGACCTTTAAGTGAGTATGG---G--------C------------G-----------GAGGG---------CTCCTCGGCTTCAC--------------------------------------------AAGTGGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAGGCGTA-TGACCTAATGCGATTGGCTTATTTCCGCATAAATGCCGTTGTTGGCTTCTTGCCTACA-----ATGC---------------G--------GC-------------------------TACGC-------------------------------GTTACGTATACGCTTTATATCCGCTTCACTGCT------------------------------GCTGG------TTCTATATTTGGTAAGGGTG---CTGCAC-AGCATTCT---------------------------------------------------------------------------------------------------CAACG----SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............CTGGCAACATGGATCGTCACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
TTTGATTTTCTCACTGGCAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
...............GGCAACATGGATCGTCACCATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
droMoj3
TTTGACTTTCTCACTGGGAACATGGATCGGCATCATTACGAGACTTTCAAGTGAGTATAA---A-GTGTGG------------------------------------------------ACT---------------------------------------GTGGAGTG-------------------------------------------------------------------------------------------------------TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCGATTTTGGCCAG-AGACATAATGCGATTGGCTTATTTCCGCATAACTGGCGTTGTTGGCTTCATGCCTACC----------G---------------------------------------CCGTGTGGGTAGCGC-------------------------------ATTACGTATACGTATCCCATACGCTTCAC-----TTCATC-----TGGGGCTGC--------------TGCTGTCTCTATATTTGGCAAGGCTG---CCGCAC-AGCATGCTCAACGG--CAG--GA--------------------GCCAA------------------------------------------------TGCC----------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............GGGAACATGGATCGGCATCATTACGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
droGri2
TTTGATTTTCTTACCGGCAACATGGATCGTCATCATTACGAGACGTTCAAGTGAGTATTG---A-T----------------------------------TGGTCC--------------------------------------------------------------------AC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATG----C---GACTGGATG---AGTGTGCATAAAACGAATTTTTGGCAAG-CT--------GGATTGGTTTATTTCCGCATAAATGGCGTTGTTGGCTTCATGCCTACC-----ATGT---------------G--------GCTGCATGTG-----------AGCATGTGAGC-------------------------------TTTAATGATGCAGCTGCTGCG-G------------------------------T--------------CTCAGCGCCCATATTTGGCA-----------GCATTTGAA---------------------------------------------------------------------------------------------------------ATGCTCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............ACCGGCAACATGGATCGTCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101

Generated: 05/18/2015 at 10:56 AM