ID:

dsi_9523

 Coordinate:

3r:16246601-16246724 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.7 -13.6 -13.6

Flybase annnotation

CDS [3r_16246598_16246600_-]; exon [3r_16246598_16246600_-]; intron [3r_16246507_16246597_-]; CDS [3r_16246725_16246992_-]; exon [3r_16246725_16246992_-]; intron [3r_16246601_16246724_-]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------###-----------------------------------------------
TGCCCTCCTGGTTGAGATCAACCCCTATGCCGAGGATGCCATGTCCGGCTGTAAGTTTGGTTATATATGTTCTCTTAAGTTGTGTGTTGTGGTCTAATTCTAATGTCTGTCTCATCCTAACGAACTAACTCATTTGTGAATGTCATTGAACTGGATTTCATGTTTTCTATCCAGGCTGTAAGTATATTTCACCAAAAATAACACTTTCCACCCATTAAACTATG
**************************************************..((((((((((..((((((((.....((((((.(((((.((.......................))))))).)).)))).......)))))).))..))))))))))................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
.......................CCTATGCCGAGGATGCCATGTCCGGA............................................................................................................................................................................... 26 1 1 1.00 1 0 0 0 0 1 0 0
.................TTAACCCCTATGCCGAGG............................................................................................................................................................................................. 18 1 1 1.00 1 0 1 0 0 0 0 0
.............GAGATCAACCCCTATGCCGAGGATG.......................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0
.............GAGATCAACCCCTATGCCGAGGATGC......................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................TCTAATGTCTGTCTCATCCTAACG...................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0
..............AGATCAACCCCTATGCCGAGGATTA......................................................................................................................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................CTTAACCCCTATGCCGAGG............................................................................................................................................................................................. 19 2 2 0.50 1 0 0 0 0 0 1 0
...............................................................................................................................................CATTGAACTGGATTATACGTTT........................................................... 22 3 3 0.33 1 0 1 0 0 0 0 0
.......................................................................................TGTGGTTTAATTCTAA......................................................................................................................... 16 1 11 0.09 1 0 1 0 0 0 0 0
........................................................................................GTGGTCTAATTCGAA......................................................................................................................... 15 1 11 0.09 1 0 0 0 0 0 0 1
.....TGCTGGTTCTGATCAACCC........................................................................................................................................................................................................ 19 3 15 0.07 1 0 0 0 0 0 0 1
.......................................................................................................................AGGACCTAACTCATTTGGG...................................................................................... 19 3 18 0.06 1 0 1 0 0 0 0 0

Anti-sense strand reads

ACGGGAGGACCAACTCTAGTTGGGGATACGGCTCCTACGGTACAGGCCGACATTCAAACCAATATATACAAGAGAATTCAACACACAACACCAGATTAAGATTACAGACAGAGTAGGATTGCTTGATTGAGTAAACACTTACAGTAACTTGACCTAAAGTACAAAAGATAGGTCCGACATTCATATAAAGTGGTTTTTATTGTGAAAGGTGGGTAATTTGATAC
**************************************************..((((((((((..((((((((.....((((((.(((((.((.......................))))))).)).)))).......)))))).))..))))))))))................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M023
head
 M053
female body
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M024
male body
...............................TTCCTACGGTACAGGCCGACAT........................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
................TAGTGGGAGATACGGCTC.............................................................................................................................................................................................. 18 2 3 0.67 2 0 0 2 0 0 0
.................................................................................................................................................................CAAAAGATAGGGCTGACATTTAT........................................ 23 3 2 0.50 1 0 1 0 0 0 0
.................................................................................................................................................................CAAAAGATAGGGCTGACATTTA......................................... 22 3 3 0.33 1 0 1 0 0 0 0
..................................CTACGGTACAGGCCAAA............................................................................................................................................................................. 17 2 20 0.15 3 0 0 0 3 0 0
.........................................................................................................................................................................AGCTCCGGCATTCATA....................................... 16 2 20 0.10 2 0 0 0 0 2 0
.........................................................................................................................................CTTTCTGTAACTTGACCT..................................................................... 18 2 15 0.07 1 0 0 0 1 0 0
...........................................................................................................................................................................................................GTAAGACGGGTAATTTGATA. 20 3 17 0.06 1 0 0 0 0 0 1
.....................................................................................................................................................TGACCGAAAGTACAAACG......................................................... 18 2 19 0.05 1 0 0 1 0 0 0
..................................................................................................................TGGAGTGCTTGATTGATTA........................................................................................... 19 3 20 0.05 1 0 0 0 0 0 1
..................................................................................................................AGGATTGGATGATGGAGT............................................................................................ 18 3 20 0.05 1 0 0 0 1 0 0
..............................................................................................ATTAAGATTACATGTAGAGT.............................................................................................................. 20 3 20 0.05 1 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:16246551-16246774 - dsi_9523 TGCCCTCCTGGTTGAGATCAACCCCTATGCCGAGGATGCCATGTCCGGCTGTAAGTTTGG--TTATATAT-GTT-CTCTTAAGTTGTGTGTTGTG-GT--------------CTAAT---TCTAATGTCTGT---CT--------CATCCT-A-AC----------------------------------------------------------GAACTAAC--TCATTTGTGAA-TGTCA---TTG-A-ACTGG-------------ATT----------TCATGT-TTTCTATCCAGGCTGTAAGTATATTTCACC--AAA-------------------------------------------------------------------------------------------------------------------------------AATA---------ACACTT-----------TCC-ACC-----------------------------------------------------CATTAAACT-------------------ATG
droSec2 scaffold_0:17112668-17112891 - TGCCCTCCTGGTTGAGATCAACCCCTATGCCGAGGATGCCATGTCCGGCTGTAAGTTTGG--TTATATAT-GTT-CTCTTAAGTTATGTGTTGTG-GT--------------CTAAT---TCTAATGTCTGT---CT--------CATCCT-A-AC----------------------------------------------------------GAACTAAC--TCATTTGTGTA-TGTCA---TTG-T-ACTGG-------------ATT----------TCATGT-TTTCTGTCCAGGCTGTAAGTATATTTCACC--AAT-------------------------------------------------------------------------------------------------------------------------------AATA---------ACCCTT-----------ACC-ATC-----------------------------------------------------CATTAAACT-------------------ATG
dm3 chr3R:4766862-4767085 + TGCCCTCTTGGTTGAGATCAACCCCTATGCCGAGGATGCCATGTCCGGCTGTAAGTTTAG--TTATATAT-GTT-CTCTTAAGCCATGTGTTGTG-GT--------------CTAAT---TCTAATGTCTGT---CT--------CATCCT-A-AC----------------------------------------------------------GAACTAAC--TCATTTGTGAT-TGTCA---TTG-T-ACTGG-------------ATT----------TGATGT-TTTCTGTCCAGGCTGTAAGTATATTTCACC--AAT-------------------------------------------------------------------------------------------------------------------------------AATA---------ACCCTT-----------TCC-ATT-----------------------------------------------------CATTAACCT-------------------ATG
droEre2 scaffold_4770:16836588-16836823 - TGCCCTCTTGGTGGAGATCAATCCCTATGCCGAGGATGCCATGTCCGGCTGTAAGTTTGG--TTATATAT-ATT-TTCCTTGGTGATGTGTTGTG-TT--------------CTAAA---TCTAATGTCTGT---CT--------CATCCT-A-AC----------------------------------------------------------AAAATAAC--TCATTTGTGAA-TGTCA---TTG-T-ACTGG-------------ATT----------TCATGT-TTTCTGTCCAGGCTGTAAGTATATTTCACC--AAT--------------------------------------------------------------------------------------------------------------ATCAAGCTTATTAAC-----CC---------TGCTG-----------CTC-ATT-----------------------------------------------------TATTAAACT-------------------ATG
droYak3 3R:8811074-8811314 + TGCCCTCCTGGTTGAGATCAACCCCTATGCCGAGGATGCCATGTCCGGCTGTAAGTTTGG--TTATAAAT-ATT-CTCCTATGTGATGTGTTGTG-GT--------------CTAAT---TCTAATGTCTGT---CT--------CATCCT-A-AC----------------------------------------------------------AAACTAAC--TCATTTGTGAA-TGTCA---TTG-T-ACTGG-------------ATT----------TCATGT-TTTCTGTCCAGGCTGTAAGTATATTTCACC--CAT--------------------------------------------------------------------------------------------------------------GTCAAGCTTATTAACAAATTCC---------CATTT-----------CTC-ATT-----------------------------------------------------CATTAAACT-------------------ATG
droEug1 scf7180000409467:713329-713557 - TGCTCTCCTGGTTGAGATCAACCCCTATGCTGAGGATGCCATGACTGGCTGTAAGTTTGA--AGTTTAAC-CTT-GTCTTCAGTGTTTTGTTAAGTCT--------------CTATT---TCTAATGTTTCA-------TCT-T---TCCT-A-AC----------------------------------------------------------AACATAAC--CCATTTGTGAA-TGTCA---TTA-A-TCTGG-------------ATT----------TCGTGT-TTTCTGTCCAGGCTGTAAGTATGCATTACTAA-CA--------------------------------------------------------------------------------------------------------------AAT--------------CATCT---------CATTT-----------ATT-TCT-----------------------------------------------------TAAAAACCA-------------------ATG
droBia1 scf7180000302402:7470169-7470407 + TGCTCTCTTGGTTGAGATCAACCCCTACGCCGAGGATGCCATGTCTGGCTGTAAGTTTGG--CTATCTCG-CTT-CTATAAAGTGTCTAGTTGTG-CT--------------CTATT---TCTAATGTATCAT--TCCATTT-C---TCCT-A-AC----------------------------------------------------------ATCTTAAC--CCATTTGTGAA-TGTCA---TTA-T-GCTGG-------------ATT----------TCATGT-TGTCTGTCCAGGCTGTAAGTATTTATCACCTA-CT--------------------------------------------------------------------------------------------------------------AACAAG--------------CT-------------------------CTG-----------------------------------ATTCATTATATT--------TTAATAAAAAT-------------------ATA
droTak1 scf7180000414009:53900-54093 - TGCTCTGCTGGTTGAGATCAATCCCTACGCCGAGGATGCCATGACTGGCTGTAAGTTTAC--AGATCT--CT-T--TAATAAGTATTGTTTTGTG-GT--------------CTAAT---TCTAATGCCTCAT--CTCATTT-C---TCCT-A-TC----------------------------------------------------------AAACTAAC--CCATTTGTGAA-TGTCA---TAT-T-ACT-G-------------ATT----------TCATGT-TTTCTGTCCAGGCTGTAAGTATATATCACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491212:1033600-1033930 - CGCACTCTTGGTTGAGATCAACCCGTATGCCGAGGATGCCATGAGTGGCTGTAAGTTTTC--GGATTTAA-TTT-CTCTTTAGTGTTTCTATGTGTGA--------------CTTAT---TCTAATATCTCAT--CTCATCT-T---TTCT-A-AC----------------------------------------------------------AAAATAAC--CCATTTGTGAA-TGTCA----------CTGG-------------ATT----------TCATGTCTTTCTGTCCAGGCTGTAAGTATATATCACCCA-CTAAC---------ATTTAGTTTGGAAATATTATTGGT-GCAGGATTTACAAAGATTAATAATTCCATTTTTAATCTTCAGATATGTTTCCATAAACATAAATTCATTTGACAGCAAT-----------CGAA------------------------------------------------T------------------TTTTGTGC----------TAAATAAGCT-------------------ATA
droRho1 scf7180000779210:35431-35704 - TGCTCTCTTGGTTGAGATCAACCCCTATGCCGAGGATGCCATGACTGGCTGTAAGTTTTGGGT--TTT-C-CTT-CTCTT-AGTGTTTTAATGTGTGT--------------CTACT---TCTAATATCTCAT--CTCATCT-T---TCCT-A-AC----------------------------------------------------------AAATTAAC--CCATTTGTGAA-TGTCA----------CTGG-------------ATT----------TCATGT-TTTCTGCCCAGGCTGTAAGTATATGTCATCAA-CTAACAACGAGTGCATATAGCTTAGAAATATGATTGGT-GCAGGGTTTAT---GTTCAATAAT---------------------------------------------------------------------AC---------TA--T-----------TTT-AAT-----------------------------------------------------TATCAAAC---------------------TG
droFic1 scf7180000454106:2423224-2423450 - TGCTCTCTTGGTTGAGATCAACCCCTATGCCGAGGATGCCATGTCAGGCTGTAAGTTTGA--ATCTAT-C-ATT-CCTTT-AATGG--TTTTGTGTGT--------------TTAAT---TCTAATAACTCAC--CTCATCT-C---TCCT-A-AC----------------------------------------------------------AAATTAAC--CCATTTGTGTA-TGTCA---TAC-T-TCTGG-------------ATT----------TCATGT-AATCT-TTTAGGCTGTAAGTATATAAAA------G--------------------------------------------------------------------------------------------------------------ACCAAG-----------CAAA------------------------------------------------T------------------CATTGTACT--------CTAATAAACCC-------------------ATG
droKik1 scf7180000302639:1799448-1799659 - TGCCCTCTTAGTTGAGATCAATCCCTATGCTGAGGATGCCATGTCAGGCTGTAAGTTTGC--AAATTAAT-GTT-G------------CTATT---CC----TTC-ATC---CATGT---ACTAATAACTCA---TTCATCT------CTTAA-TC----------------------------------------------------------TAATTAAC--TCATTTGTAAA-TGTCA---TAA-T-GGTGG-------------ATT----------TTGTG----TCTGTCCAGGCTGTAAGTATATGTATATGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATGTATTTCCCGTAAAA---CTCTTA
droAna3 scaffold_13340:3516869-3517083 + CGCCCTTCTGGTCGAGATCAATCCCTATGCCGAGGACGCCCTGACTGGCTGTAAGTAAGG--GATTTCCC-ATT-CTG-TCGGCCACTTCTCTTT-GTGTAA----------CTCAT---TTCAATTTC-------T--------CACTCTAA-CC----------------------------------------------------------GAAATAAC--TCATTTGTGCT-TGTCC---TAA-C-CCGGG-------------GT---------------GTGTTTCTGTCTAGGCTGTAAGTATTCATTTTCCA-GA-------------------------------------------------------------------------------------------------------------------------------------------AACTATTCA---------TCC-AAG----------------------------------------------------------AATT-------------------AAA
droBip1 scf7180000396712:836705-836916 - TGCCCTTCTGGTCGAAATCAATCCCTATGCTGAGGACGCCCTGTCTGGCTGTAAGTAAGG--GATTTCCC-ATT-GT------------GTTG---GC-CACTTCTTTTTGTGT------------AACTCAT--CCCATTTTCTCATC-----TC----------------------------------------------------------AACCTAACTCTCATTTGTGCT-TGTTC--CTAA-T-CCTGG-------------GTG----------TTT----GGTCTGTCTAGGCTGTAAGTATGCGTTGTTCTAAA-------------------------------------------------------------------------------------------------------------------------------AC------------------------------C-AAT-----------------------------------------------------CCTTAGAGC-------------------TTG
dp5 2:22990963-22991216 - TGCTCTCTTGGTGGAGATCAATCCCTATGCCGAGGATGCCATGAGTGGCTGTAAGTTCTC--T-AAATGTGT-TCGTGTTAAGTGTTCTTTTA----T--------------TTAATCCATTTAATGCATGTAATCC--------TATCCC-A-AA--------------------------------------------------------AACACCTAAC--CCATTCCCAAC-TGTAA---AAAAC-CATGG-------------ATT----------TCATATTTTTCTGTCCAGGCTGTGAGTATGCATGA--------------------------------------------------------------------------------------------------------------------------------------------------AACCGTTAT---------TCC-ATCAATTAAGCAATCAAATCAC------TATCTGAATCC------------------GTATATCC-------------------ATT
droPer2 scaffold_3:5767738-5767991 - TGCTCTCTTGGTGGAGATCAATCCCTATGCCGAGGATGCCATGAGTGGCTGTAAGTTCTC--T-AAATGTGT-TCGTGTTAAGTGTTCTTTTA----T--------------TTAATCCATTTAATGCATGTAATCC--------TATCCC-A-AA--------------------------------------------------------AACACCTAAC--CCATTCCCAAC-TGTAA---AAAAC-CATGG-------------ATT----------TCATATTTTTCTGTCCAGGCTGTGAGTATGCATGA--------------------------------------------------------------------------------------------------------------------------------------------------AACCGTTAT---------TCC-ATCAATTAAGCAATCAAATCAC------TATCTGAATCC------------------GTATATCC-------------------ATT
droWil2 scf2_1100000004902:6415116-6415301 + TGCTCTATTGGTGGAAATCAATCCTTATGCTGAAGATGCCATGACCGGCTGTAAGTCAAG--TT---TAT-TTT-TTATTTAAT-AT-------GTGT--------------TTAAT---TTTAAT------T--CTCATCT-C---TTCT-A-ACTAATTCATATTTGTTCTGT-TCATATTAACCTAAAACCATTTGTGTTGTTTTTCCAAACA-------------------------------------------------------------------------------AAAGGCTGTGAGTATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13047:3177979-3178108 + TGCGCTCTTGGTTGAGATTAATCCCTATGCCGAAGATGCTATGACTGGCTGTAAGTTAAG--TTTTT----ATT-GA-ACAAGT-----CTTATGTGT-------T------TCATG---CATAATCTCTGT---C--GCCT-T---TCCT-T-AA----------------------------------------------------------CAACTAAC--TCATTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:20220200-20220481 + TGCACTGTTAGTTGAGATCAATCCCTATGCGGAAGATGCCATGACTGGCTGTAAGTTGTC--AGCTTGCC-GAA-CTCTT-AACGA---------TAACTAACT--------CTA-C---TAAAACATT---T--GTCATCT-T---TCCT-TAACTAACTCATAATTCATCTATATCATAATAAC--------------------------------------------GTCAA---------TAA-T-GCTGC-------------G------------TGATGCTGACTTGTAAAGGCTGTAAGTACTGCTTTATAT--------------------------------ATATGGTTGCA--CTTTGAAATCACA-------CTACATAAAATCACCCAA------------------------------TATAAG--------------CTCAACGGAAATT--T-----------ACT-AAA-----------------------------------------------------CAAAAATC---------------------CA
droGri2 scaffold_15074:7552340-7552672 + TGCGCTCTTGGTTGAAATCAATCCCTATGCCGAAGATGCCATGACCGGCTGTAAGTTGAT--TT---CCT-TT---CTTT-ATTAATATCATGTGTGC--------------TG------------------------------------------------------------------------------------------TGTCCGCTAACAACTAAC--CCATTCCTCATCTATATTT-AAACTCATTGAATTTGCATCTTGCGTGAAAACTCTAACGATGTTAACCCACAAAGGCTGTAAGTATTATTCGAAAT--------------------------------GCTTGGTAGCTAGATTTTAAATGACA-------A--------------------------------------TCAATAGACAGA--------------------------AACCTTCTTTAGCATGTTTTGTAGC-ATTAAGGTATTAAATCAAAAGTAATAATTTAATCC-------TCAATATTT-CGTGTAACT---------AAAAATTGTATTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGCCCTCCTGGTTGAGATCAACCCCTATGCCGAGGATGCCATGTCCGGCTGTAAGTTTGG--TTATATAT-GTT-CTCTTAAGTTGTGTGTTGTG-GT--------------CTAAT---TCTAATGTCTGT---CT--------CATCCT-A-AC----------------------------------------------------------GAACTAAC--TCATTTGTGAA-TGTCA---TTG-A-ACTGG-------------ATT----------TCATGT-TTTCTATCCAGGCTGTAAGTATATTTCACC--AAA-------------------------------------------------------------------------------------------------------------------------------AATA---------ACACTT-----------TCC-ACC-----------------------------------------------------CATTAAACT-------------------ATGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................CCTATGCCGAGGATGCCATGTCCGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
.............GAGATCAACCCCTATGCCGAGGATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
.............GAGATCAACCCCTATGCCGAGGATGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000001000
........................................................................................................................TCTAATGTCTGT---CT--------CATCCT-A-AC----------------------------------------------------------G....................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
..............AGATCAACCCCTATGCCGAGGATTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000001000
droSec2
TGCCCTCCTGGTTGAGATCAACCCCTATGCCGAGGATGCCATGTCCGGCTGTAAGTTTGG--TTATATAT-GTT-CTCTTAAGTTATGTGTTGTG-GT--------------CTAAT---TCTAATGTCTGT---CT--------CATCCT-A-AC----------------------------------------------------------GAACTAAC--TCATTTGTGTA-TGTCA---TTG-T-ACTGG-------------ATT----------TCATGT-TTTCTGTCCAGGCTGTAAGTATATTTCACC--AAT-------------------------------------------------------------------------------------------------------------------------------AATA---------ACCCTT-----------ACC-ATC-----------------------------------------------------CATTAAACT-------------------ATGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................CCCCTATGCCGAGGATGCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0022000
....................ACCCCTATGCCGAGGATGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
...................AACCCCTATGCCGAGGATGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.........................................................................................................................................................................................................................CTAAC--TCATTTGTGTA-TG.............................................................................................................................................................................................................................................................................................................................................1811.0010001
............................GCCGAGGATGCCATGTCCGGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
........................CTATGCCGAGGATGCCATGTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
...........TTGAGATCAACCCCTATGCCGAGGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010001
.................TCAACCCCTATGCCGAGGATGCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
.......................CCTATGCCGAGGATGCCATGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001
...................AACCCCTATGCCGAGGATGCCATGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000
..........................ATGCCGAGGATGCCATGTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
..................CAACCCCTATGCCGAGGATGCCATGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
dm3
TGCCCTCTTGGTTGAGATCAACCCCTATGCCGAGGATGCCATGTCCGGCTGTAAGTTTAG--TTATATAT-GTT-CTCTTAAGCCATGTGTTGTG-GT--------------CTAAT---TCTAATGTCTGT---CT--------CATCCT-A-AC----------------------------------------------------------GAACTAAC--TCATTTGTGAT-TGTCA---TTG-T-ACTGG-------------ATT----------TGATGT-TTTCTGTCCAGGCTGTAAGTATATTTCACC--AAT-------------------------------------------------------------------------------------------------------------------------------AATA---------ACCCTT-----------TCC-ATT-----------------------------------------------------CATTAACCT-------------------ATGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................ATGCCGAGGATGCCATGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACCCCTATGCCGAGGATGCCATGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AACCCCTATGCCGAGGATGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACCCCTATGCCGAGGATGCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...................AACCCCTATGCCGAGGATGCCATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CCTATGCCGAGGATGCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................ATGCCGAGGATGCCATGTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.......................CCTATGCCGAGGATGCCATGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CCCCTATGCCGAGGATGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TTGAGATCAACCCCTATGCCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGCCCTCTTGGTTGAGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000
.......................CCTATGCCGAGGATGCCATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CCCTATGCCGAGGATGCCATGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.....................CCCCTATGCCGAGGATGCCATGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATGCCGAGGATGCCATGTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................ACCCCTATGCCGAGGATGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GCCCTCTTGGTTGAGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGCCCTCTTGGTTGAGATCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CCCCTATGCCGAGGATGCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................CCCTATGCCGAGGATGCCATGTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
......................CCCTATGCCGAGGATGCCATGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACCCCTATGCCGAGGATGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGCCCTCTTGGTTGAGATCAACCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ATCAACCCCTATGCCGAGGATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......................CCTATGCCGAGGATGCCATGTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
...........................TGCCGAGGATGCCATGTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CAACCCCTATGCCGAGGATGCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GCCCTCTTGGTTGAGATCAACCCCTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACCCCTATGCCGAGGATGCCATGTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TTGAGATCAACCCCTATGCCGAGGATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CCCTATGCCGAGGATGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CTATGCCGAGGATGCCATGTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TTGAGATCAACCCCTATGCCGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........TGGTTGAGATCAACCCCTATGCCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATGCCGAGGATGCCATGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..................CAACCCCTATGCCGAGGATGCCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............AGATCAACCCCTATGCCGAGGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TGCCGAGGATGCCATGTCCGGCTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TCTTGGTTGAGATCAACCCCTATGCCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GGATGCCATGTCCGGCTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CCCCTATGCCGAGGATGCCATGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GAGATCAACCCCTATGCCGAGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AACCCCTATGCCGAGGATGCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TGAGATCAACCCCTATGCCGAGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CCGAGGATGCCATGTCCGGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
...............GATCAACCCCTATGCCGAGGATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GCCCTCTTGGTTGAGATCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TCAACCCCTATGCCGAGGATGCCATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CCTATGCCGAGGATGCCATGTCCGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................T-TGTCA---TTG-T-ACTGG-------------ATT----------T.................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACCCCTATGCCGAGGATGCCATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TATGCCGAGGATGCCATGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................TCA---TTG-T-ACTGG-------------ATT----------TGATG.............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CTTGGTTGAGATCAACCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ATCAACCCCTATGCCGAGGATGCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CAACCCCTATGCCGAGGATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AACCCCTATGCCGAGGATGATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................T-ACTGG-------------ATT----------TGATGT-TTTCTGTC...................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............GATCAACCCCTATGCCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................AAT-------------------------------------------------------------------------------------------------------------------------------AATA---------ACCCTT-----------TCC-ATA-----------------------------------------------------TG.............................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
droEre2
TGCCCTCTTGGTGGAGATCAATCCCTATGCCGAGGATGCCATGTCCGGCTGTAAGTTTGG--TTATATAT-ATT-TTCCTTGGTGATGTGTTGTG-TT--------------CTAAA---TCTAATGTCTGT---CT--------CATCCT-A-AC----------------------------------------------------------AAAATAAC--TCATTTGTGAA-TGTCA---TTG-T-ACTGG-------------ATT----------TCATGT-TTTCTGTCCAGGCTGTAAGTATATTTCACC--AAT--------------------------------------------------------------------------------------------------------------ATCAAGCTTATTAAC-----CC---------TGCTG-----------CTC-ATT-----------------------------------------------------TATTAAACT-------------------ATGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................CTATGCCGAGGATGCCATGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
.........................TATGCCGAGGATGCCATGTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.........................TATGCCGAGGATGCCATGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
....................ATCCCTATGCCGAGGATGCCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
..........................ATGCCGAGGATGCCATGTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
................ATCAATCCCTATGCCGAGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
..........GTGGAGATCAATCCCTATGCCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
...................AATCCCTATGCCGAGGATGCCATGTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
...............GATCAATCCCTATGCCGAGGATGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
....................ATCCCTATGCCGAGGATGCCATGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
.......................CCTATGCCGAGGATGCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
droYak3
TGCCCTCCTGGTTGAGATCAACCCCTATGCCGAGGATGCCATGTCCGGCTGTAAGTTTGG--TTATAAAT-ATT-CTCCTATGTGATGTGTTGTG-GT--------------CTAAT---TCTAATGTCTGT---CT--------CATCCT-A-AC----------------------------------------------------------AAACTAAC--TCATTTGTGAA-TGTCA---TTG-T-ACTGG-------------ATT----------TCATGT-TTTCTGTCCAGGCTGTAAGTATATTTCACC--CAT--------------------------------------------------------------------------------------------------------------GTCAAGCTTATTAACAAATTCC---------CATTT-----------CTC-ATT-----------------------------------------------------CATTAAACT-------------------ATGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................ATGCCGAGGATGCCATGTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200000020000
..........................ATGCCGAGGATGCCATGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.GCCCTCCTGGTTGAGATCAACCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.........................TATGCCGAGGATGCCATGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000
...............GATCAACCCCTATGCCGAGGATGCCATGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000
.........................TATGCCGAGGATGCCATGTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.............GAGATCAACCCCTATGCCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
........................CTATGCCGAGGATGCCATGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...................AACCCCTATGCCGAGGATGCCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
..................CAACCCCTATGCCGAGGATGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000
droEug1
TGCTCTCCTGGTTGAGATCAACCCCTATGCTGAGGATGCCATGACTGGCTGTAAGTTTGA--AGTTTAAC-CTT-GTCTTCAGTGTTTTGTTAAGTCT--------------CTATT---TCTAATGTTTCA-------TCT-T---TCCT-A-AC----------------------------------------------------------AACATAAC--CCATTTGTGAA-TGTCA---TTA-A-TCTGG-------------ATT----------TCGTGT-TTTCTGTCCAGGCTGTAAGTATGCATTACTAA-CA--------------------------------------------------------------------------------------------------------------AAT--------------CATCT---------CATTT-----------ATT-TCT-----------------------------------------------------TAAAAACCA-------------------ATGSizeHit CountTotal NormTotal
No Reads
droBia1
TGCTCTCTTGGTTGAGATCAACCCCTACGCCGAGGATGCCATGTCTGGCTGTAAGTTTGG--CTATCTCG-CTT-CTATAAAGTGTCTAGTTGTG-CT--------------CTATT---TCTAATGTATCAT--TCCATTT-C---TCCT-A-AC----------------------------------------------------------ATCTTAAC--CCATTTGTGAA-TGTCA---TTA-T-GCTGG-------------ATT----------TCATGT-TGTCTGTCCAGGCTGTAAGTATTTATCACCTA-CT--------------------------------------------------------------------------------------------------------------AACAAG--------------CT-------------------------CTG-----------------------------------ATTCATTATATT--------TTAATAAAAAT-------------------ATASizeHit CountTotal NormTotal
No Reads
droTak1
TGCTCTGCTGGTTGAGATCAATCCCTACGCCGAGGATGCCATGACTGGCTGTAAGTTTAC--AGATCT--CT-T--TAATAAGTATTGTTTTGTG-GT--------------CTAAT---TCTAATGCCTCAT--CTCATTT-C---TCCT-A-TC----------------------------------------------------------AAACTAAC--CCATTTGTGAA-TGTCA---TAT-T-ACT-G-------------ATT----------TCATGT-TTTCTGTCCAGGCTGTAAGTATATATCACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CGCACTCTTGGTTGAGATCAACCCGTATGCCGAGGATGCCATGAGTGGCTGTAAGTTTTC--GGATTTAA-TTT-CTCTTTAGTGTTTCTATGTGTGA--------------CTTAT---TCTAATATCTCAT--CTCATCT-T---TTCT-A-AC----------------------------------------------------------AAAATAAC--CCATTTGTGAA-TGTCA----------CTGG-------------ATT----------TCATGTCTTTCTGTCCAGGCTGTAAGTATATATCACCCA-CTAAC---------ATTTAGTTTGGAAATATTATTGGT-GCAGGATTTACAAAGATTAATAATTCCATTTTTAATCTTCAGATATGTTTCCATAAACATAAATTCATTTGACAGCAAT-----------CGAA------------------------------------------------T------------------TTTTGTGC----------TAAATAAGCT-------------------ATASizeHit CountTotal NormTotal
No Reads
droRho1
TGCTCTCTTGGTTGAGATCAACCCCTATGCCGAGGATGCCATGACTGGCTGTAAGTTTTGGGT--TTT-C-CTT-CTCTT-AGTGTTTTAATGTGTGT--------------CTACT---TCTAATATCTCAT--CTCATCT-T---TCCT-A-AC----------------------------------------------------------AAATTAAC--CCATTTGTGAA-TGTCA----------CTGG-------------ATT----------TCATGT-TTTCTGCCCAGGCTGTAAGTATATGTCATCAA-CTAACAACGAGTGCATATAGCTTAGAAATATGATTGGT-GCAGGGTTTAT---GTTCAATAAT---------------------------------------------------------------------AC---------TA--T-----------TTT-AAT-----------------------------------------------------TATCAAAC---------------------TGSizeHit CountTotal NormTotal
No Reads
droFic1
TGCTCTCTTGGTTGAGATCAACCCCTATGCCGAGGATGCCATGTCAGGCTGTAAGTTTGA--ATCTAT-C-ATT-CCTTT-AATGG--TTTTGTGTGT--------------TTAAT---TCTAATAACTCAC--CTCATCT-C---TCCT-A-AC----------------------------------------------------------AAATTAAC--CCATTTGTGTA-TGTCA---TAC-T-TCTGG-------------ATT----------TCATGT-AATCT-TTTAGGCTGTAAGTATATAAAA------G--------------------------------------------------------------------------------------------------------------ACCAAG-----------CAAA------------------------------------------------T------------------CATTGTACT--------CTAATAAACCC-------------------ATGSizeHit CountTotal NormTotal
No Reads
droKik1
TGCCCTCTTAGTTGAGATCAATCCCTATGCTGAGGATGCCATGTCAGGCTGTAAGTTTGC--AAATTAAT-GTT-G------------CTATT---CC----TTC-ATC---CATGT---ACTAATAACTCA---TTCATCT------CTTAA-TC----------------------------------------------------------TAATTAAC--TCATTTGTAAA-TGTCA---TAA-T-GGTGG-------------ATT----------TTGTG----TCTGTCCAGGCTGTAAGTATATGTATATGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATGTATTTCCCGTAAAA---CTCTTASizeHit CountTotal NormTotal
No Reads
droAna3
CGCCCTTCTGGTCGAGATCAATCCCTATGCCGAGGACGCCCTGACTGGCTGTAAGTAAGG--GATTTCCC-ATT-CTG-TCGGCCACTTCTCTTT-GTGTAA----------CTCAT---TTCAATTTC-------T--------CACTCTAA-CC----------------------------------------------------------GAAATAAC--TCATTTGTGCT-TGTCC---TAA-C-CCGGG-------------GT---------------GTGTTTCTGTCTAGGCTGTAAGTATTCATTTTCCA-GA-------------------------------------------------------------------------------------------------------------------------------------------AACTATTCA---------TCC-AAG----------------------------------------------------------AATT-------------------AAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................ATGCCGAGGACGCCCTGACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2016.006200004
...........................TGCCGAGGACGCCCTGACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.004300001
......TCTGGTCGAGATCAATCCCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000002
.GCCCTTCTGGTCGAGATCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
...............GATCAATCCCTATGCCGAGGACGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.....TTCTGGTCGAGATCAATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
.........................TATGCCGAGGACGCCCTGACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
........................CTATGCCGAGGACGCCCTGACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.................TCAATCCCTATGCCGAGGACGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
........................CTATGCCGAGGACGCCCTGACTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..........................ATGCCGAGGACGCCCTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...........................TGCCGAGGACGCCCTGACTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.......................CCTATGCCGAGGACGCCCTGACTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
...............GATCAATCCCTATGCCGAGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............GAGATCAATCCCTATGCCGAGGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
...................AATCCCTATGCCGAGGACGCCCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
..CCCTTCTGGTCGAGATCAATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..............................CGAGGACGCCCTGACTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...................AATCCCTATGCCGAGGACGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...CCTTCTGGTCGAGATCAATCCCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.........................TATGCCGAGGACGCCCTGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
............................GCCGAGGACGCCCTGACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...........................TGCCGAGGACGCCCTGACTGGCTTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
......................CCCTATGCCGAGGACGCCCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
................ATCAATCCCTATGCCGAGGACGCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
....................ATCCCTATGCCGAGGACGCCCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.GCCCTTCTGGTCGAGATCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..............AGATCAATCCCTATGCCGAGGACGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
..............AGATCAATCCCTATGCCGAGGACGCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
................ATCAATCCCTATGCCGAGGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.GCCCTTCTGGTCGAGATCAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
......................CCCTATGCCGAGGACGCCCTGACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.........GGTCGAGATCAATCCCTATGCCGAGGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
.........GGTCGAGATCAATCCCTATGCCGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
....................ATCCCTATGCCGAGGACGCCCTGACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
droBip1
TGCCCTTCTGGTCGAAATCAATCCCTATGCTGAGGACGCCCTGTCTGGCTGTAAGTAAGG--GATTTCCC-ATT-GT------------GTTG---GC-CACTTCTTTTTGTGT------------AACTCAT--CCCATTTTCTCATC-----TC----------------------------------------------------------AACCTAACTCTCATTTGTGCT-TGTTC--CTAA-T-CCTGG-------------GTG----------TTT----GGTCTGTCTAGGCTGTAAGTATGCGTTGTTCTAAA-------------------------------------------------------------------------------------------------------------------------------AC------------------------------C-AAT-----------------------------------------------------CCTTAGAGC-------------------TTGSizeHit CountTotal NormTotal
No Reads
dp5
TGCTCTCTTGGTGGAGATCAATCCCTATGCCGAGGATGCCATGAGTGGCTGTAAGTTCTC--T-AAATGTGT-TCGTGTTAAGTGTTCTTTTA----T--------------TTAATCCATTTAATGCATGTAATCC--------TATCCC-A-AA--------------------------------------------------------AACACCTAAC--CCATTCCCAAC-TGTAA---AAAAC-CATGG-------------ATT----------TCATATTTTTCTGTCCAGGCTGTGAGTATGCATGA--------------------------------------------------------------------------------------------------------------------------------------------------AACCGTTAT---------TCC-ATCAATTAAGCAATCAAATCAC------TATCTGAATCC------------------GTATATCC-------------------ATTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....CTCTTGGTGGAGATCAATCCCTAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001000000
..........................ATGCCGAGGATGCCATGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
......................CCCTATGCCGAGGATGCCATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
..........................................................................................................................................................................................................................................................................................CATATTTTTCTGTCCAGGC..............................................................................................................................................................................................................................................................................1911.0010000000010
.........................TATGCCGAGGATGCCATGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
....................ATCCCTATGCCGAGGATGCCATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010000
...............................GAGGATGCCATGAGTGGCTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............GATCAATCCCTATGCCGAGGATGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
......CTTGGTGGAGATCAATCCCTATGCCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010001000000
droPer2
TGCTCTCTTGGTGGAGATCAATCCCTATGCCGAGGATGCCATGAGTGGCTGTAAGTTCTC--T-AAATGTGT-TCGTGTTAAGTGTTCTTTTA----T--------------TTAATCCATTTAATGCATGTAATCC--------TATCCC-A-AA--------------------------------------------------------AACACCTAAC--CCATTCCCAAC-TGTAA---AAAAC-CATGG-------------ATT----------TCATATTTTTCTGTCCAGGCTGTGAGTATGCATGA--------------------------------------------------------------------------------------------------------------------------------------------------AACCGTTAT---------TCC-ATCAATTAAGCAATCAAATCAC------TATCTGAATCC------------------GTATATCC-------------------ATTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............GATCAATCCCTATGCCGAGGATGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002011000
.........................TATGCCGAGGATGCCATGAGTGGCTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
................ATCAATCCCTATGCCGAGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...................AATCCCTATGCCGAGGATGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
droWil2
TGCTCTATTGGTGGAAATCAATCCTTATGCTGAAGATGCCATGACCGGCTGTAAGTCAAG--TT---TAT-TTT-TTATTTAAT-AT-------GTGT--------------TTAAT---TTTAAT------T--CTCATCT-C---TTCT-A-ACTAATTCATATTTGTTCTGT-TCATATTAACCTAAAACCATTTGTGTTGTTTTTCCAAACA-------------------------------------------------------------------------------AAAGGCTGTGAGTATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............AATCAATCCTTATGCTGAAGATGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200110
...............AATCAATCCTTATGCTGAAGATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200200
.......................CTTATGCTGAAGATGCCATGACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
....................ATCCTTATGCTGAAGATGCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.....................................................................................................................................................................................TTAACCTAAAACCATTTGTGT.................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...........................TGCTGAAGATGCCATGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
..........GTGGAAATCAATCCTTATGCTGAAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
...............AATCAATCCTTATGCTGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
................ATCAATCCTTATGCTGAAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
............................GCTGAAGATGCCATGACCGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.........................TATGCTGAAGATGCCATGACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
.............GAAATCAATCCTTATGCTGAAGATGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
................ATCAATCCTTATGCTGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...TCTATTGGTGGAAATCAATCCTTATGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
........................TTATGCTGAAGATGCCATGACCGGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.................TCAATCCTTATGCTGAAGATGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
..........................ATGCTGAAGATGCCATGACCGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
..........................ATGCTGAAGATGCCATGACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000
...........................TGCTGAAGATGCCATGACCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
...................AATCCTTATGCTGAAGATGCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
.........GGTGGAAATCAATCCTTATGCTGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
droVir3
TGCGCTCTTGGTTGAGATTAATCCCTATGCCGAAGATGCTATGACTGGCTGTAAGTTAAG--TTTTT----ATT-GA-ACAAGT-----CTTATGTGT-------T------TCATG---CATAATCTCTGT---C--GCCT-T---TCCT-T-AA----------------------------------------------------------CAACTAAC--TCATTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................TATGCCGAAGATGCTATGACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003000000000000000002100000000000000000000000000000000000000000000
..........................ATGCCGAAGATGCTATGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003000000000000000012000000000000000000000000000000000000000000000
....................ATCCCTATGCCGAAGATGCTATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
....................ATCCCTATGCCGAAGATGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
............................GCCGAAGATGCTATGACTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
............TGAGATTAATCCCTATGCCGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000010000000000000000000000000000000000000000000000
....CTCTTGGTTGAGATTAATCCCTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
......CTTGGTTGAGATTAATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000010000000000000000000000000
........TGGTTGAGATTAATCCCTATGCCGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
................ATTAATCCCTATGCCGAAGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
...GCTCTTGGTTGAGATTAATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.......................CCTATGCCGAAGATGCTATGACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000100000000000000000000000000000000000000000000
................................................................................................................TCATG---CATAATCTCTGT---C--GCCT-T---TCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000010000000000000000000000000000000000
...............GATTAATCCCTATGCCGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
........................CTATGCCGAAGATGCTATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
...............GATTAATCCCTATGCCGAAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...........TTGAGATTAATCCCTATGCCGAAGATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
..................TAATCCCTATGCCGAAGATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
....CTCTTGGTTGAGATTAATCCCTATGCCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000100000000000000000000000000000000000000000000000
.........GGTTGAGATTAATCCCTATGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
...GCTCTTGGTTGAGATTAATCCCTATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000010000000000000000000000000000000000
.......................CCTATGCCGAAGATGCTATGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000001
...............GATTAATCCCTATGCCGAAGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
.....TCTTGGTTGAGATTAATCCCTATGCCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................TGT-------T------TCATG---CATAATCTCTGT---....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
................ATTAATCCCTATGCCGAAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000100000000000000000000000000000000000000000000000000000
.....................TCCCTATGCCGAAGATGCTATGACTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000010000000000000000000000000000000000000
........TGGTTGAGATTAATCCCTATGCCGAAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
droMoj3
TGCACTGTTAGTTGAGATCAATCCCTATGCGGAAGATGCCATGACTGGCTGTAAGTTGTC--AGCTTGCC-GAA-CTCTT-AACGA---------TAACTAACT--------CTA-C---TAAAACATT---T--GTCATCT-T---TCCT-TAACTAACTCATAATTCATCTATATCATAATAAC--------------------------------------------GTCAA---------TAA-T-GCTGC-------------G------------TGATGCTGACTTGTAAAGGCTGTAAGTACTGCTTTATAT--------------------------------ATATGGTTGCA--CTTTGAAATCACA-------CTACATAAAATCACCCAA------------------------------TATAAG--------------CTCAACGGAAATT--T-----------ACT-AAA-----------------------------------------------------CAAAAATC---------------------CASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................TC--AGCTTGCC-GAA-CTCTT-AACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.........AGTTGAGATCAATCCCTATGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100
........................CTATGCGGAAGATGCCATGACTGGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
...............GATCAATCCCTATGCGGAAGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.GCACTGTTAGTTGAGATCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
droGri2
TGCGCTCTTGGTTGAAATCAATCCCTATGCCGAAGATGCCATGACCGGCTGTAAGTTGAT--TT---CCT-TT---CTTT-ATTAATATCATGTGTGC--------------TG------------------------------------------------------------------------------------------TGTCCGCTAACAACTAAC--CCATTCCTCATCTATATTT-AAACTCATTGAATTTGCATCTTGCGTGAAAACTCTAACGATGTTAACCCACAAAGGCTGTAAGTATTATTCGAAAT--------------------------------GCTTGGTAGCTAGATTTTAAATGACA-------A--------------------------------------TCAATAGACAGA--------------------------AACCTTCTTTAGCATGTTTTGTAGC-ATTAAGGTATTAAATCAAAAGTAATAATTTAATCC-------TCAATATTT-CGTGTAACT---------AAAAATTGTATTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATCC-------TCAATATTT-CGTGT..........................2111.00110
..............AAATCAATCCCTATGCCGAAGATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110

Generated: 05/18/2015 at 11:59 PM