ID:

dsi_9414

 Coordinate:

3l:5686240-5686489 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-2.9 -2.6 -2.4

Flybase annnotation

CDS [3l_5686217_5686239_+]; five_prime_UTR [3l_5686151_5686216_+]; CDS [3l_5686490_5686638_+]; exon [3l_5686490_5686638_+]; exon [3l_5686151_5686239_+]; intron [3l_5686240_5686489_+]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATAGAAAACAACAAATTTATTAGCAAAATGGTTAGCAGAAATATAGAAAGGTAAATACGGCGCCCAGTTACGCGGATGCAGTGGGATTACGCAACGCATTCCATCTGGGTGCAGCCAAATCGCAGTTCCCAAGTGCACCTGCCCTGGTTATGCAATTTAGTAGGCGGCTTCTTCATTTATCTCGTCCGGACAATGGCTTCTCTGCTTCGGTTGTTCTGAGCGCTTGATCTTGACCTTAACCTTGAGCTCCACATCAAGATAACCATGATTGATTCGTGTATTGTTGTTCTACTTGTGCAGCACCAGTAAGGTGCCAACTTTCCATGTCATCCGCGAGGTCTACGACAGCT
*****************************************************************************************************************************************************.............(((((..............)))))..........********************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M023
head
 M024
male body		 M053
female body
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
...............................................................................................................................................................................TTTATCTCGTCCGGACAATGG.......................................................................................................................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TTCATTTATCTCGTCCGGACA.............................................................................................................................................................. 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................ATTTATCTCGTCCGGACAATG........................................................................................................................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................ATGCAATTTAGTAGGCGGCT..................................................................................................................................................................................... 20 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TTCATTTATCTCGTCCGGACAATGG.......................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................ACGCGGATGCAGTGGGATTACGCAAC............................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................AATTTAGTAGGCGGCTTCTTTT............................................................................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................TTGAGCTCCACATCAAGATAACCATGA.................................................................................. 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................TCGCAGTTCCCAAGTGCACCT.................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................CCATGTCATCCGCGAGGTCTA........ 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................ACGCGGATGCAGTGGGATTA..................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................TCCATGTCATCCGCGAGGTCTACGAC.... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................................................................................................GTTCTACTTGTGCAGCACCAG............................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TTCATTTATCTCGTCCGGACAATGGC......................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................................................................................................................AAGATAACCATGATTGATTCG.......................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CATTTATCTCGTCCGGACAA............................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................GTAGGCGGCTTCTTCATTT............................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TAGTAGGCGGCTTCTTCATTT............................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................AGGTCATCCGCGAGGT........... 16 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................CACATCAAGATAACCATGA.................................................................................. 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................GTCATCCGCGAGGTCTACGAC.... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................GCGGATGCAGTGGGATTACG................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................ATCTCGTCCGGACAATGGCTT....................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................ATAGAAAGGTAAATACGGC................................................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................ATGGCTTCTCTGCTTCGGTTTT........................................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................TAGCAAAATGGTTAGCAGAAA..................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................TGACCTTAACCTTGAGCTCCACATC............................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................TTCATTTATCTCGTCCGGGCA.............................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................AATTTAGTAGGCGGCTTCTTC................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................CTTCTACATTTAGCTCCTCCG.................................................................................................................................................................. 21 3 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.........AACTAATTTCTGAGCAAAATGG............................................................................................................................................................................................................................................................................................................................... 22 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................TAGGCGGCTTCTTAATT............................................................................................................................................................................. 17 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................................................................................................GTATTGTTGTTCTCCTGGT...................................................... 19 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................................................................................................GCTTCGGTTGTTCAG.................................................................................................................................... 15 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................................GTTGTTGTAAGTGCTTGATC......................................................................................................................... 20 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 1
..................................................................................................................................................................................................................TTGTACTGACCGCTTG............................................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................ATCTGGTACGGACAAGGG.......................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................TCTGAGCGCTTGCCCT........................................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

TATCTTTTGTTGTTTAAATAATCGTTTTACCAATCGTCTTTATATCTTTCCATTTATGCCGCGGGTCAATGCGCCTACGTCACCCTAATGCGTTGCGTAAGGTAGACCCACGTCGGTTTAGCGTCAAGGGTTCACGTGGACGGGACCAATACGTTAAATCATCCGCCGAAGAAGTAAATAGAGCAGGCCTGTTACCGAAGAGACGAAGCCAACAAGACTCGCGAACTAGAACTGGAATTGGAACTCGAGGTGTAGTTCTATTGGTACTAACTAAGCACATAACAACAAGATGAACACGTCGTGGTCATTCCACGGTTGAAAGGTACAGTAGGCGCTCCAGATGCTGTCGA
**********************************************************************************************************************************************************.............(((((..............)))))..........***************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
....................................................................................................................................................................................................................................................................................................................................ACAGTAGGCGCTCCAGATGCT..... 21 0 1 9.00 9 9 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................GGTACAGTAGGCGCTCCAGAT........ 21 0 1 6.00 6 6 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................CAGTAGGCGCTCCAGATGCTG.... 21 0 1 5.00 5 5 0 0 0 0
..................................................................................................................................................................................................................................................................................................................ATTCCACGGGTGAAAGGTACA....................... 21 1 1 2.00 2 2 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................GGTGAAAGGTACAGTAGGCGC............... 21 1 1 2.00 2 2 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................GTACAGTAGGCGCTCCAGATG....... 21 0 1 2.00 2 2 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................AAAAGGTACAGTAGGCGCTCC............ 21 1 1 2.00 2 2 0 0 0 0
.......................................................................................................................................................................................................................................................................................TAACAACAAGATGAACACGTC.................................................. 21 0 1 2.00 2 2 0 0 0 0
....................................................................................................................................................................TCCGAAGAAGTAGGTAGAGCAG.................................................................................................................................................................... 22 3 1 2.00 2 0 2 0 0 0
......................................................................................................................................................................................................................................................................................................................................AGTAGGCGCTCCAGATGCTGT... 21 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................................................................................................................TATTCCACGGGTGAAAGGTACA....................... 22 2 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................AAGTAGGCGCTCCAGATGCTGT... 22 1 1 1.00 1 1 0 0 0 0
..................................................................................................AAGGAAGACCCACTTCGGT......................................................................................................................................................................................................................................... 19 2 1 1.00 1 0 0 1 0 0
....................................................................................................................................................................................GAGCAGGCCTGTTACCGAAGA..................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................AGTACAGTAGGCGCTCCAGATG....... 22 1 1 1.00 1 1 0 0 0 0
.................................................................................................................CGGTTTAGCGTCAAGGGTTC......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................GTACAGTAGGCGCTCCAGAT........ 20 0 1 1.00 1 1 0 0 0 0
......................CGTTTTACCAATCGTCTTTATA.................................................................................................................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................TCAGTAGGCGCTCCAGATGCT..... 21 1 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................TTTCCGCCGAAGAAGTAAATAG......................................................................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................ATTGTAGGCGCTCCAGATGCT..... 21 2 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................TGTACAGTAGGCGCTCCAGATG....... 22 1 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................ACAGTAGACGCTCCAGATGCTG.... 22 1 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................................................................................................................ATTCTACGGGTGAAAGGTACA....................... 21 2 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................................................................................................................ATTCCACGGGTGAAAGGTAC........................ 20 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................CCACGGGTGAAAGGTACAGTAG................... 22 1 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................TACAGTAGGCGCTCCAGATGC...... 21 0 1 1.00 1 1 0 0 0 0
..............................................................................................................TTTCGGTTTAGCGTCAAGGGTT.......................................................................................................................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................................................................................AGCACATAACAACAAGATGAA........................................................ 21 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................................................................................................................TTCCACGGGTGAAAGGTAC........................ 19 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................CAGTAGGCGCTCCAGATGCT..... 20 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................AACAGTAGGCGCTCCAGATGCT..... 22 1 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................ATACAGTAGGCGCTCCAGAT........ 20 1 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................AGGCGCTCCAGATGCTGTCGA 21 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................GACGAAGCCAACAAGACTCGC................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................ATTCAGTAGGCGCTCCAGATG....... 21 2 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................GAAAGGTACAGTAGGCGCTCC............ 21 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................TACAGTAGGCGCTCCAGATGCT..... 22 0 1 1.00 1 1 0 0 0 0
...................................................................................................AGGAAGACCCACTTCGGT......................................................................................................................................................................................................................................... 18 2 7 0.43 3 0 0 3 0 0
....................................................................................................................................................................................................................GAAGACTCGCGAACTA.......................................................................................................................... 16 1 4 0.25 1 0 0 1 0 0
...................................................................................................................................................................................................................................AGAGCTGGAGTTGGAAC.......................................................................................................... 17 2 12 0.17 2 0 0 1 1 0
.........................................................................................GCGGCGCTTAAGGTAGACCC................................................................................................................................................................................................................................................. 20 3 7 0.14 1 0 1 0 0 0
...............................................................................................................................................................CATTCGCAGAAGAAGTATAT........................................................................................................................................................................... 20 3 9 0.11 1 0 1 0 0 0
.................................................................................................................................................................................ATGGCGCAGGCCTGT.............................................................................................................................................................. 15 2 20 0.10 2 0 0 2 0 0
.............................................................................................................................................................................................................................................................................................................................GATAGGTTCAGTAGGCGCC.............. 19 3 17 0.06 1 0 0 0 0 1
.............................................................................................................................................................................................................................CGAACTGGCAGTGGAATTG.............................................................................................................. 19 3 18 0.06 1 0 1 0 0 0
............................................................................................................................................................................................................................GCGTACTAGCACTGGA.................................................................................................................. 16 2 20 0.05 1 0 0 1 0 0
................................................................................................................................................................................AATAGGGCAGGCATGT.............................................................................................................................................................. 16 2 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:5686190-5686539 + dsi_9414 ATAGAAAA---CAACAAATTTATTAGCAAAATGGTTAGCAG-AAATATAGAAAGGTAAATACGGCGCCCAGTT-A--------------------CGCGGATGCAGTG--GGATTACGCAACGCA----TTCCATCT------------GGGTGCAGCCAAATCGCAGTTC-CCAAGTGC--ACCTGCCCTGGTTATGCAATTTAGTAGGCGGCT------TCTTCATTTATCTC---------GTCCGGACAATGGCTTCTCTG----C-T---TCGGTTGTT---------CTG----AGCGCTTGA-------------TCTTGACCTTAACCTTGA-----------GCT-CCACATCAAGATA---------ACCATGATTGAT-----------------------------------T-------CG-TGTATTGTTGT----TCTACTTGTGCAGCACCAGTAAGGTGC-CAACTTTCCATGTCATCCGCGAGGTCTACGACAGCT
droSec2 scaffold_2:5710341-5710469 + T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTG----AGCGC-TGA-------------TC-TGACCTTAACCTTGA-----------GCT--CACATC-AGATA---------ACCATGAT-GAT-----------------------------------T-------CG-TGTATG-T-GT----TCT-ACTGTGCAGCACCAGTAAGGTGCCCCACTTTCCATGTCATTCGCGAGGTCTACGACAGCT
dm3 chr3L:5773184-5773533 + ATAGAAAA---CAACAAATTTATTAGCAAAATGGTTAGCAG-AAATATAGAAAGGTAAATACGGCGCCTAGTT-A--------------------CGTGAATGCAGTG--GGATTACGCAACACA----TTCCACCT------------GGGTGCAGCCAAATCCCAGTTC-CCAAGTGC--ACCTGCCCTGGTTATGCAATTTACTAGGCGGCT------TCTTCATTTATCTC---------GTCTGCACAATGGCTTCTCTG----C-T---TCGGTTGTT---------CTG----AGCGCTTGA-------------TCTTGACCTTAACCTTGA-----------GTT-CCACATCAAGATA---------ACCATGATTGAT-----------------------------------T-------CG-TGTATTGTTGT----TCTAATTGTGCAGCACGAGTAAGGTGC-CCACTTTCCATGTCATCCGCGAGGTCTACGACAGCT
droEre2 scaffold_4784:8463822-8464170 + ATAGAAAA---CAACAAATTTATTAGCAAAATGGTTAGCAG-AAATATAGAAAGGTAAATACGGCGCCCAGTT-A--------------------CGTGGATGCAGTG--GGATTGCGCAACGCA----TTCTACAT----------G-GGGTGCAGCCGAATTCCAGTGC-CCAAGTGC--ACCTGCCCTGGTTATGCAATTTACTAGGCGGCT------TCTTTATTTATCTC---------GCCTGGACAATGGCTTCTGTG----C-T---TCTGTTGTT---------CTG----A--GCTTAG-------------TCTTGACCTTAACCTTGA-----------GTT-TCACATGAAGATA---------ACCGCGATTGAT-----------------------------------T-------TG-TGTATTGTTCT----TGTACTTGCCCAGCACGAGTAAGGTGC-ACACTTTCCATGTCATCCGCGAGGTCTACGACAGTT
droYak3 3L:6342670-6343017 + ATAGAAAA---CAACAAATTTATTAGCAAAATGGTTAGCAA-AAATATAGAAAGGTAAATACGGCGCCCAGTT-A--------------------CGTAGATGCACTG--GGATTACGCAACGCA----CTCGACCT------------GGGTGCAGCCGAATTCCAGATC-ACAAGTGC--ACCTGCCCTGGTTATGCAATTTACTAGGCGGCT------TCTTTATTTATCTC---------GACTGGACAATGGCTTCTGTG----C-T---TCTGTTGTT---------CTC----A--GCTTAA-------------TCTTGACCTTAACCTTGA-----------GCT-GCACATCCAGATA---------ACCGTGATTGAT-----------------------------------T-------TG-TGTGTTGTTCT----TCTACTTGTCCAGCACGAGTAAGGTGC-CCACTTTCCATGTCATCCGCGAGGTCTACGACAGTT
droEug1 scf7180000409466:3542937-3543280 + ATAAAAAA---CAACAAATTTATTAGCAAAATGGTTAGCAG-AAACTTAGAAAGGTAAATAAGACTCGGAGTG-A--------------------CGTTGGTGTAGTG-GGTATTACGCAACGAA----TTCTGCCT------------AGTTTCGGGCGTATCCCAGATCTTAAAGTGC--ACCTGTTCTGATTATGCAATTTACCAGGCGGCT------TCTTTATTTATCTCCC-------CCCCGGACAATGGCTTCTGCG----------------GTT-------------TGGG--GCTTAA-------------TCTCGACCTTAACCTTAT-----------GTT-TCTGATCAAGATA---------GCCATGATTGAT-----------------------------------T-------TA-TATGTTTTTCG----TCTACTTTCGCAGCACGAGTAAAGTTC-CGACTTTCCATGTCATCCGAGAAGTCTACGACAGTT
droBia1 scf7180000302193:3276004-3276345 + ATAAAAAA---CAACAAATTTATTAGTAAAATGGTTAGCAG-AAACATAGAAAGGTAAATATTACTGCGAGCG-G--------------------CGTTGATGCAGTG-AGGATTACGCAACGAG----CTGTGCCT------------GGGCGCAGCCCAGTTCCAGATCGCGAAGTGC--ACCTTCTCTGGTTATGCAATTTACCAGGCGGCT------TCTTTATTTATCTC---------C-CCGCACAATGGCTTCTGCC---------------CGTT-------------TGGA--GCTTAA-------------TCTCGACCTTAACCTTGG-----------ATT-CCACACCCAGATA---------GCCGCGATTGAT-----------------------------------T-------TG-TTTGTTTTCGG----GCTCTTTCTGCAGCACGAGTAAGGTGC-CCACGTTCCATGTCATCCGCGAGGTCTACGACAGCT
droTak1 scf7180000415868:477301-477654 + ATAAAAAA---CAACAAATTTATTAGCAAAATGGTTAGCAG-AAACATTGAAAGGTAAATACTATTCCGAGAG-A--------------------CGTTGATGCAGTG-CGGATTACGCAACTAG----TTAAA--T----------GCGGGTGCGGCACAGTTCCAGATCTTAAAGTGC--ACCTTTTCTGGTTATGCAATTTAGCAGGCGGCT------TCTGTATTTATCTC---------CGCCGGACAATGGCTTCTGCTTCTGC-T---TCTGCCGAT-------------TGGG--ACTTAA-------------TCTCGACCTTAACCTTGG-----------TTT-CCAGATCAAGATA---------GCCATGATTGAT-----------------------------------T-------TA-TACACGACTCC----TCTCTCTTTGCAGCACGAGTAAAGTGC-CCACTTTCCATGTCATCCGCGAGGTCTACGACAGTT
droEle1 scf7180000491268:1269795-1270148 + ATAAAAAA---CAACAAATTTATTAGCAAAATGGTTAGCAG-AAATATAGAAAGGTAAATATTGGTCCGAGAA-T--------------------CGCTAACGCA-----GGATTACGCAACTAG----TCCTATCT----------GTGGGTGCAGCCGTATCCCAGATTGTGGAGTGCACACCTGTTTTGGTTATGCAATTTACCAGGCGGCTTCGGCTTCTACA-TTATCTC---------CGCCGGACAATGGTTTCCC--------------------------------GCGGAG--GCTTAA-------------TCTTGACCTTAACCTTGAA----------AGT-CCAGATCCAGATA---------GCCTTGATTAATGGCTTCC--------------------------ATT-------CA-CATATTTCTCC----TCCTCTTGTGCAGCACGAGTAAAGTGC-CCACTTTCCATGTCATCCGCGAGGTTTACGACAGTT
droRho1 scf7180000768851:61640-61990 + ATAAAAAC---AAAAAAATTTATTAGCAAAATGGTTAGCAGTAAACATAGAAAGGTAAATATTGGT---AATT-A-------TCCGG--------TAATAATGCAGTC-GAAATTACGCAACGAG----CTCTCCCT----------GTGGGTGCAACCGCAACCCAGATCTTCGAGTGG--ACCTGTTTTGGTTATGCAATTTAGCAGGCGGCT------TCTTTAT-TATCTC---------CGCCGGACAATGGTTTTCC--------------------------------AAGGAG--GCTTAA-------------TCTCGACCTTAACCTTGGA----------AGT-CCAGGTCAAGATA---------GACGTGATTAATGGCTTCC--------------------------ATT-------TA-TATATA-T-TT----TCCTCTTCTGCAGCACGAGTAAAGTGC-CCACTTTCCATGTTATCCGCGAGGTATACGACAGTT
droFic1 scf7180000453929:1842981-1843323 - ATAAAAAA---CAACAAATTGATTAGCAAAATGGTTAGCAG-AAACTTAGAAAGGTAAATATTGCTCCGGGTG-A--------------------CGATAATGCAGTTGGTTATTACGCAACGAG----TTCCACCT----------GTGGGCGCAGCCAAATCCCAGATCTAGAAGTTC--ATCTGTTTCTGTTATGCAATTTACCAGGCGGCT------TCTTTATTTAT---------------CGGACAATGGCTTTTC--------------------------------GAGGAG--GCTTAA-------------TCTTGAACTTAACCTTGG-----------GCT-GCCGATCATGATA---------GTCTTGATTAATGATTTCT---------------------------TT-------TA-AATAATGT-AA---CGC-TCCTTTTCAGCACGAGTAAAGTTC-CGACTTTCCATGTAATTCGCGAGGTCTATGACAGTT
droKik1 scf7180000302686:70856-71232 + AAAAAAA-----AACAAAT-TATTAGCAAAATGGTTAGCAG-AAATATAGAAAGGTAAATATTACGGAAAATT-CTAA----------CCGCCTACTTGGCTGT-GTG--AGATTATGCAACGCC----CTCGAGCT------CTGGTCTACATCAGTGGAGCTCCGGATCTTGGCGTGC--ACCTTTCCCGGTTATGCAATTTGA-----------------TTTATTTATCTTCTG------CGCCGGACAATGGCTTCTGTGACGGC-CCCAACTGCAG---------------TGCG--GCATAATCTC-------CAGCTTGACCTTAACCTTGGA-CTGACT---GCT-CCAG-CAGAGATAAAGGCCTGAGCAGTGATTGATGTCCCC--------------------------------------A-A------ATCT----TTGACCTTTCCAGCACGAGTAAAGTGC-CGACTTTCCATGTCATCCGGGAGGTGTACGACAGCT
droAna3 scaffold_13337:12767382-12767773 - dan_2602 ATAAAAAAAAAAAACAAATACTTTGCAAAAATGGTTAGCAG-GAACATAGAAAGGTAAATATTGCGGATGA-----------ATTTGAGCTCTG-AGTTGCTGCAGTG-GAGATTATGCAACGCA----CTTTTTCTCAAACTGCAAGCTGCTTCAGTCAGCGTCTGG----CTTAGTGC--ACCTGATCGGGTTATGCAATTTTGTTTGCGGCT---------TTATTTATCTGCTCTGGACCGACCGGACAATGACTTCGGGGGTATCTC---TCCACTGCA---------C---TGAC--GCTTAATCTCAGAGGGCCTCCATGAACTTAACCTTGC-----------TCT---GCTGTCTGATA---------GCCGTGATTGATGTACTC-----------------------------------------------TTCTTTTTTCT-TGGTCGCAGCACGAGTAAAGTGC-CGACTTTCCATGTAATCCGAGAGGTGTACGATAGCT
droBip1 scf7180000396589:1255250-1255638 + ATAAAAAA--AAAACAAAAACTTTGCGAAAATGGTTAGCAG-GAACATAGAAAGGTAAGTATTGCGGACGA-----------ATTGGAACTCTA-AGATACAGCAGTG-TGGATTATGCAACGTA----CTCTTCCTCAAGCTGCAAGCTACTTGAGTCGGCGTCTGG----CTTAGTGC--ACCTGATCGGGTTATGCAATTTTTTATGCGGCT---------TTATTTATCTGCACTGGAC-AGCCGGACAATGACTTCTGGGGTATCTCTCCACTGCAG---------------TGGG--GCTTAATCTCTGAGGGCGGCCATGAACTTAACCTTG-------------CT-CCGCAGTCAGATA---------GCCGTGATTGATGGAGTC--------------------------------------------TT---CTTTTCTCT-TGTTTGCAGCACGAGTAAAGTTC-CGACTTTCCATGTAATCCGAGAGGTATACGACAGCT
dp5 XR_group6:9777963-9778351 - dps_3114 ATGCAAC-----------ATTAATAACAAAATGGTTAGCAG-AAGCGTAGAAAGGTGAGTTTTCCCCCAATTT-AGAACGAG------------GCGTG--AGCGGCA-TAGATTACGCAAGACGCACGTACGGCCA----------GCGAGTGCAGCGGAGTTCTGGAATTCCCAGGGC--ACCTGGTCTGGTTATGCAATTTGTTTCGCGGCTT-----TCTTTATTTATTTG---------CATCAGACCATGGCTTCTGTGAAGGC----AGCTGCAGTCGGGAACTATC----GCG--CCTACG-------------TCGCGACCTTAACCTTGGTAGCGACTGCGGCT-CCGTCTGCAGATA---------ACTGTGATTGATGCATGCC------------------------CCA-TTACGCT-TGAA------T-TC----TTTCTTTATGCAGTACGAGTAAAGTGC-CGACATTCCATGTCATAAGGGAGGTATACGACAGCT
droPer2 scaffold_61:52997-53374 - ATGCAAC-----------ATTAATAACAAAATGGTTAGCAG-AAGCGTAGAAAGGTGAGTTTTCCCCCCAATTTAGGACGAG------------GCGTG--AGCGGCG-TAGATTACGCAAGACGCACGTACGGCCA----------GCGAGTGCAGCGGAGTTCTGGAATTCCCAGGGC--ACCTGGTCTGGTTATGCAATTTGTTTCGCGGCTT-----TCTTTATTTATTTG---------ACTCAGACCATGGCTTCTGTGGAGGC----AGCTGCAGTC---------GGG----A-----ACG-------------TCGCGACCTTAACCTTGGTAGCGACTGCGGCT-CCGTCTGCAGATA---------ACTGTGATTGATGCATGCC------------------------CCA-TTACGCT-TGAA------T-TC----TTTCTTTATGCAGTACGAGTAAAGTGC-CGACATTCCATGTCATAAGGGAGGTATACGACAGCT
droWil2 scf2_1100000004511:3743245-3743407 - T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACCTTAAACTTGAA----------CTTGCCATAGAAAGATA---------ACTGTGATTGATAACTTTTCTCCTTCCCTCTCTCTCTCTCACTCCT-TTTCTCTTTC-TCTCTCTTTC-----TCATCTCTTTCAGCACCAACAAAGTGC-CCACTTTTCATGTGATTCGTGAGGTTTACGACAGTT
droVir3 scaffold_13049:8323747-8323850 + TTAAGATA-----------TGGACAATAAA---------------TATATAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTT-TGT-----------------------------------T-------TG-AA-------TA----TGTGTTTGTACAGTACAGGCAAGCAGC-CAACATTTCATGTGATACGTGAAGTCTACGACAGTT
droMoj3 scaffold_6680:11978129-11978195 + TCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGTTATTACAGTACAGGCAAGCAGC-CAACATTTCATGTCATTCGAGAAGTCTACGACAGTT
droGri2 scaffold_15110:7352598-7352652 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAGTGCAGGCAAGCAAC-CAACATTTCATGTCATACGTGAAGTCTATGACAGTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATAGAAAA---CAACAAATTTATTAGCAAAATGGTTAGCAG-AAATATAGAAAGGTAAATACGGCGCCCAGTT-A--------------------CGCGGATGCAGTG--GGATTACGCAACGCA----TTCCATCT------------GGGTGCAGCCAAATCGCAGTTC-CCAAGTGC--ACCTGCCCTGGTTATGCAATTTAGTAGGCGGCT------TCTTCATTTATCTC---------GTCCGGACAATGGCTTCTCTG----C-T---TCGGTTGTT---------CTG----AGCGCTTGA-------------TCTTGACCTTAACCTTGA-----------GCT-CCACATCAAGATA---------ACCATGATTGAT-----------------------------------T-------CG-TGTATTGTTGT----TCTACTTGTGCAGCACCAGTAAGGTGC-CAACTTTCCATGTCATCCGCGAGGTCTACGACAGCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................TTTATCTC---------GTCCGGACAATGG.................................................................................................................................................................................................................................................................2113.00300000000000003000
...............................................................................................................................................................................................................................TTCATTTATCTC---------GTCCGGACA.....................................................................................................................................................................................................................................................................2113.00300000000000003000
..................................................................................................................................................................................................................................ATTTATCTC---------GTCCGGACAATG..................................................................................................................................................................................................................................................................2113.00300000000000003000
...................................................................................................................................................................................................ATGCAATTTAGTAGGCGGCT------.....................................................................................................................................................................................................................................................................................................2012.00220000000000000000
...............................................................................................................................................................................................................................TTCATTTATCTC---------GTCCGGACAATGG.................................................................................................................................................................................................................................................................2511.00110000000000000000
..........................................................................A--------------------CGCGGATGCAGTG--GGATTACGCAAC........................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
.......................................................................................................................................................................................................AATTTAGTAGGCGGCT------TCTTTT...............................................................................................................................................................................................................................................................................................2211.00100000000000001000
................................................................................................................................................................................................................................................................................................................................................TTGA-----------GCT-CCACATCAAGATA---------ACCATGA..................................................................................................................................2711.00100000010000000000
..................................................................................................................................................................TCGCAGTTC-CCAAGTGC--ACCT........................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGTCATCCGCGAGGTCTA........2111.00100000000001000000
..........................................................................A--------------------CGCGGATGCAGTG--GGATTA..............................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCATGTCATCCGCGAGGTCTACGAC....2611.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GT----TCTACTTGTGCAGCACCAG.............................................2111.00101000000000000000
...............................................................................................................................................................................................................................TTCATTTATCTC---------GTCCGGACAATGGC................................................................................................................................................................................................................................................................2611.00100000000000010000
..........................................................................................................................................................................................................................................................................................................................................................................AAGATA---------ACCATGATTGAT-----------------------------------T-------CG-...............................................................................2111.00100000000000001000
.................................................................................................................................................................................................................................CATTTATCTC---------GTCCGGACAA....................................................................................................................................................................................................................................................................2011.00110000000000000000
.............................................................................................................................................................................................................GTAGGCGGCT------TCTTCATTT............................................................................................................................................................................................................................................................................................1911.00100000000000001000
...........................................................................................................................................................................................................TAGTAGGCGGCT------TCTTCATTT............................................................................................................................................................................................................................................................................................2111.00100000000000001000
....................................................................................................................................................................................................................................................................................................................................................................CACATCAAGATA---------ACCATGA..................................................................................................................................1911.00100001000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATCCGCGAGGTCTACGAC....2111.00110000000000000000
................................................................................................GCGGATGCAGTG--GGATTACG............................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
......................................................................................................................................................................................................................................ATCTC---------GTCCGGACAATGGCTT..............................................................................................................................................................................................................................................................2111.00100000000000001000
..............................................ATAGAAAGGTAAATACGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
.......................TAGCAAAATGGTTAGCAG-AAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
.....................................................................................................................................................................................................................................................................................................................................TGACCTTAACCTTGA-----------GCT-CCACATC........................................................................................................................................................2511.00100000010000000000
.......................................................................................................................................................................................................AATTTAGTAGGCGGCT------TCTTC................................................................................................................................................................................................................................................................................................2111.00100000000000001000
droSec2
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTG----AGCGC-TGA-------------TC-TGACCTTAACCTTGA-----------GCT--CACATC-AGATA---------ACCATGAT-GAT-----------------------------------T-------CG-TGTATG-T-GT----TCT-ACTGTGCAGCACCAGTAAGGTGCCCCACTTTCCATGTCATTCGCGAGGTCTACGACAGCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGTCATTCGCGAGGTCT.........2011.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCATTCGCGAGGTCTA........1911.0010100
dm3
ATAGAAAA---CAACAAATTTATTAGCAAAATGGTTAGCAG-AAATATAGAAAGGTAAATACGGCGCCTAGTT-A--------------------CGTGAATGCAGTG--GGATTACGCAACACA----TTCCACCT------------GGGTGCAGCCAAATCCCAGTTC-CCAAGTGC--ACCTGCCCTGGTTATGCAATTTACTAGGCGGCT------TCTTCATTTATCTC---------GTCTGCACAATGGCTTCTCTG----C-T---TCGGTTGTT---------CTG----AGCGCTTGA-------------TCTTGACCTTAACCTTGA-----------GTT-CCACATCAAGATA---------ACCATGATTGAT-----------------------------------T-------CG-TGTATTGTTGT----TCTAATTGTGCAGCACGAGTAAGGTGC-CCACTTTCCATGTCATCCGCGAGGTCTACGACAGCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................ATGATTGAT-----------------------------------T-------CG-TGTATTGTT......................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000010000000000
....................................AGCAG-AAATATAGAAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ATGATTGAT-----------------------------------T-------CG-TGTATTGTTGT----TCT.............................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTAAGGTGC-CCACTTTCC...........................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................................GCAG-AAATATAGAAAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000
...........................................................................................................................................................................................................................................................................................................................................................................AGATA---------ACCATGATTGAT-----------------------------------T-------CG-T..............................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TTGAT-----------------------------------T-------CG-TGTATTGTTGT----TC..............................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
..............................................ATAGAAAGGTAAATACGGCGCCTAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................GTTAGCAG-AAATATAGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000010000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGTAAGGTGC-CCACTTTCC...........................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................AATATAGAAAGGTAAATACGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................TCTTCATTTATCTC---------GTCTGCA.......................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCATGTCATCCGCGAGGT...........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AATGGTTAGCAG-AAATATAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................AGTT-A--------------------CGTGAATGCAGTG--GGA.................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000
..............................ATGGTTAGCAG-AAATATAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CAAATTTATTAGCAAAAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................AGTT-A--------------------CGTGAATGCAGTG--....................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCAGCACGAGTAAGGTGT-....................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................CATGATTGAT-----------------------------------T-------CG-TGTATTGT.......................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGGTGC-CCACTTTCCATGTCAT....................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGTAAGGTGC-CCACTTTCCATGTC......................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCCGCGAGGTCTACGACAGCT2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GGTTAGCAG-AAATATAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCGAGGTCTACGACA...1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TGGTTAGCAG-AAATATAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCATGTCATCCGCGAGGTC..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTATTAGCAAAATGGTTAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GCCTAGTT-A--------------------CGTGAATGCAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................AGTT-A--------------------CGTGAATGCAGTG--GGATT...............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................CGCCTAGTT-A--------------------CGTGAATGCAGTG--GGA.................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................AATATAGAAAGGTAAATACGGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
.......................................................TAAATACGGCGCCTAGTT-A--------------------CGTGAATGC..........................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................TT---------CTG----AGCGCTTGA-------------TCTTGACCTT......................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TATGCAATTTACTAGGCGGCT------TCTTC................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AGCAAAATGGTTAGCAG-AAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................AATGGCTTCTCTG----C-T---TCGGTT.........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................TT---------CTG----AGCGCTTGA-------------TCTTGACC........................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GT----TCTAATTGTGCAGCACGAG.............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AAAATGGTTAGCAG-AAATATAGAAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TG----AGCGCTTGA-------------TCTTGACCTT......................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AATGGTTAGCAG-AAATATAGAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................ATA---------ACCATGATTGAT-----------------------------------T-------CG-TGTA...........................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGTAAGGTGC-CCACT...............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ATTTATTAGCAAAATGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.................................GTTAGCAG-AAATATAGAAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GTTAGCAG-AAATATAGAAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTTTCCATGTCATCCGCGAGGT...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGC-CCACTTTCCATGTCATC...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................ATTTATCTC---------GTCTGCACAATG..................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GTTAGCAG-AAATATAGAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.............................AATGGTTAGCAG-AAATATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................ACTAGGCGGCT------TCTTCATTT............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.....................ATTAGCAAAATGGTTAGCAG-AA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TGAT-----------------------------------T-------CG-TGTATTGTTGT----TCT.............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................ATAGAAAGGTAAATACGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
....................................................................................................................................................................................................TGCAATTTACTAGGCGGCT------TCC..................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................ATTAGCAAAATGGTTAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.......................................................TAAATACGGCGCCTAGTT-A--------------------CG.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......A---CAACAAATTTATTAGCAAAATGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AAATGGTTAGCAG-AAATATAGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGTCATCCGCGAGGTCTAT.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CAATTTACTAGGCGGCT------TCT..................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................CAACACA----TTCCACCT------------GGGTGCA......................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TT-A--------------------CGTGAATGCAGTG--GGATT...............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTATTAGCAAAATGGTTAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................TGCACAATGGCTTCTCTG----C-T---TCGGT..........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................ACCATGATTGAT-----------------------------------T-------CG-TGTATTGTTGT----................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................................................................................TGAATGCAGTG--GGATTACGCAAA........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................CTCTG----C-T---TCGGTTGTT---------CTG----AG....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..........................................AAATATAGAAAGGTAAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CTG----AGCGCTTGA-------------TCTTGACCT.......................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCATCCGCGAGGTCTA........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................CTTGACCTTAACCTTGA-----------GTT-C..............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................GTGAATGCAGTG--GGATTAC.............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................................................A--------------------CGTGAATGCAGTG--GGAT................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.......................................................................................................................................................................................................................................................TGCACAATGGCTTCTCTG----C-T---T..............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
............................................ATATAGAAAGGTAAATACGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
................................................................CGCCTAGTT-A--------------------CGTGAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................ATTGAT-----------------------------------T-------CG-TGTATTGTTG.....................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCATCCGCGAGGTCTACGA.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCATCCGCGAGGTCTACGAC....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................GCCAAATCCCAGTTC-CCAAGT................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGAGTAAGGTGC-CCACTTTCCATGT.......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................AGCGCTTGA-------------TCTTGACCTTAA....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------------T-------CG-TGTATTGTTGT----TCTAATTGTG......................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGCAGCACGAGTAAGGTGC-C...................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCATGTCATCCGCGA..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................TAGGCGGCT------TCTTCATTTATC.........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................GTTGTT---------CTG----AGCGCTTGA-------------TCTTGACCT.......................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
......................................................................................................................................................................................................................T------TCTTCATTTATCTC---------GTCTGCA.......................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCATCCGCGAGGTCTA........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................TT-A--------------------CGTGAATGCAGTG--GGA.................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...............................................................................................CGTGAATGCAGTG--GGATTA..............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................GATTGAT-----------------------------------T-------CG-TGTATTGTTG.....................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................AAAATGGTTAGCAG-AAATATAGAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCAGCACGAGTAAGGTGC-....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------------T-------CG-TGTATTGTTGT----TCTAATTG........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ATGATTGAT-----------------------------------T-------CG-TGTATTGTTG.....................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........................................AATATAGAAAGGTAAATACGGCGCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.........................GCAAAATGGTTAGCAG-AAATAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TCTG----C-T---TCGGTTGTT---------CTG----AGC...................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATCCGCGAGGTCTACGAC....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCATGTCATCCGCGAGGTC..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
..................................TTAGCAG-AAATATAGAAAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................TTGTT---------CTG----AGCGCTTGA-------------TCTTG...........................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
droEre2
ATAGAAAA---CAACAAATTTATTAGCAAAATGGTTAGCAG-AAATATAGAAAGGTAAATACGGCGCCCAGTT-A--------------------CGTGGATGCAGTG--GGATTGCGCAACGCA----TTCTACAT----------G-GGGTGCAGCCGAATTCCAGTGC-CCAAGTGC--ACCTGCCCTGGTTATGCAATTTACTAGGCGGCT------TCTTTATTTATCTC---------GCCTGGACAATGGCTTCTGTG----C-T---TCTGTTGTT---------CTG----A--GCTTAG-------------TCTTGACCTTAACCTTGA-----------GTT-TCACATGAAGATA---------ACCGCGATTGAT-----------------------------------T-------TG-TGTATTGTTCT----TGTACTTGCCCAGCACGAGTAAGGTGC-ACACTTTCCATGTCATCCGCGAGGTCTACGACAGTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................CGTGGATGCAGTG--GGATT...............................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
......................................................................................................................................................................................................................................................CTGGACAATGGCTTCTGTG----C-T---TCTG...........................................................................................................................................................................................................................................2511.0010000010
.................ATTTATTAGCAAAATGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
...................TTATTAGCAAAATGGTTAGCAG-AAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
..................................................................................................GGATGCAGTG--GGATTGCGCA..........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000
...................................................................................................................................CTACAT----------G-GGGTGCAGCCGAATTCCAGT.........................................................................................................................................................................................................................................................................................................................................................2711.0010000010
droYak3
ATAGAAAA---CAACAAATTTATTAGCAAAATGGTTAGCAA-AAATATAGAAAGGTAAATACGGCGCCCAGTT-A--------------------CGTAGATGCACTG--GGATTACGCAACGCA----CTCGACCT------------GGGTGCAGCCGAATTCCAGATC-ACAAGTGC--ACCTGCCCTGGTTATGCAATTTACTAGGCGGCT------TCTTTATTTATCTC---------GACTGGACAATGGCTTCTGTG----C-T---TCTGTTGTT---------CTC----A--GCTTAA-------------TCTTGACCTTAACCTTGA-----------GCT-GCACATCCAGATA---------ACCGTGATTGAT-----------------------------------T-------TG-TGTGTTGTTCT----TCTACTTGTCCAGCACGAGTAAGGTGC-CCACTTTCCATGTCATCCGCGAGGTCTACGACAGTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-TGTGTTGTTCT----TCTACTTGTCCAG...................................................2611.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCATGTCATCCGCGAGGT...........2011.00101000000000
droEug1
ATAAAAAA---CAACAAATTTATTAGCAAAATGGTTAGCAG-AAACTTAGAAAGGTAAATAAGACTCGGAGTG-A--------------------CGTTGGTGTAGTG-GGTATTACGCAACGAA----TTCTGCCT------------AGTTTCGGGCGTATCCCAGATCTTAAAGTGC--ACCTGTTCTGATTATGCAATTTACCAGGCGGCT------TCTTTATTTATCTCCC-------CCCCGGACAATGGCTTCTGCG----------------GTT-------------TGGG--GCTTAA-------------TCTCGACCTTAACCTTAT-----------GTT-TCTGATCAAGATA---------GCCATGATTGAT-----------------------------------T-------TA-TATGTTTTTCG----TCTACTTTCGCAGCACGAGTAAAGTTC-CGACTTTCCATGTCATCCGAGAAGTCTACGACAGTTSizeHit CountTotal NormTotal
No Reads
droBia1
ATAAAAAA---CAACAAATTTATTAGTAAAATGGTTAGCAG-AAACATAGAAAGGTAAATATTACTGCGAGCG-G--------------------CGTTGATGCAGTG-AGGATTACGCAACGAG----CTGTGCCT------------GGGCGCAGCCCAGTTCCAGATCGCGAAGTGC--ACCTTCTCTGGTTATGCAATTTACCAGGCGGCT------TCTTTATTTATCTC---------C-CCGCACAATGGCTTCTGCC---------------CGTT-------------TGGA--GCTTAA-------------TCTCGACCTTAACCTTGG-----------ATT-CCACACCCAGATA---------GCCGCGATTGAT-----------------------------------T-------TG-TTTGTTTTCGG----GCTCTTTCTGCAGCACGAGTAAGGTGC-CCACGTTCCATGTCATCCGCGAGGTCTACGACAGCTSizeHit CountTotal NormTotal
No Reads
droTak1
ATAAAAAA---CAACAAATTTATTAGCAAAATGGTTAGCAG-AAACATTGAAAGGTAAATACTATTCCGAGAG-A--------------------CGTTGATGCAGTG-CGGATTACGCAACTAG----TTAAA--T----------GCGGGTGCGGCACAGTTCCAGATCTTAAAGTGC--ACCTTTTCTGGTTATGCAATTTAGCAGGCGGCT------TCTGTATTTATCTC---------CGCCGGACAATGGCTTCTGCTTCTGC-T---TCTGCCGAT-------------TGGG--ACTTAA-------------TCTCGACCTTAACCTTGG-----------TTT-CCAGATCAAGATA---------GCCATGATTGAT-----------------------------------T-------TA-TACACGACTCC----TCTCTCTTTGCAGCACGAGTAAAGTGC-CCACTTTCCATGTCATCCGCGAGGTCTACGACAGTTSizeHit CountTotal NormTotal
No Reads
droEle1
ATAAAAAA---CAACAAATTTATTAGCAAAATGGTTAGCAG-AAATATAGAAAGGTAAATATTGGTCCGAGAA-T--------------------CGCTAACGCA-----GGATTACGCAACTAG----TCCTATCT----------GTGGGTGCAGCCGTATCCCAGATTGTGGAGTGCACACCTGTTTTGGTTATGCAATTTACCAGGCGGCTTCGGCTTCTACA-TTATCTC---------CGCCGGACAATGGTTTCCC--------------------------------GCGGAG--GCTTAA-------------TCTTGACCTTAACCTTGAA----------AGT-CCAGATCCAGATA---------GCCTTGATTAATGGCTTCC--------------------------ATT-------CA-CATATTTCTCC----TCCTCTTGTGCAGCACGAGTAAAGTGC-CCACTTTCCATGTCATCCGCGAGGTTTACGACAGTTSizeHit CountTotal NormTotal
No Reads
droRho1
ATAAAAAC---AAAAAAATTTATTAGCAAAATGGTTAGCAGTAAACATAGAAAGGTAAATATTGGT---AATT-A-------TCCGG--------TAATAATGCAGTC-GAAATTACGCAACGAG----CTCTCCCT----------GTGGGTGCAACCGCAACCCAGATCTTCGAGTGG--ACCTGTTTTGGTTATGCAATTTAGCAGGCGGCT------TCTTTAT-TATCTC---------CGCCGGACAATGGTTTTCC--------------------------------AAGGAG--GCTTAA-------------TCTCGACCTTAACCTTGGA----------AGT-CCAGGTCAAGATA---------GACGTGATTAATGGCTTCC--------------------------ATT-------TA-TATATA-T-TT----TCCTCTTCTGCAGCACGAGTAAAGTGC-CCACTTTCCATGTTATCCGCGAGGTATACGACAGTTSizeHit CountTotal NormTotal
No Reads
droFic1
ATAAAAAA---CAACAAATTGATTAGCAAAATGGTTAGCAG-AAACTTAGAAAGGTAAATATTGCTCCGGGTG-A--------------------CGATAATGCAGTTGGTTATTACGCAACGAG----TTCCACCT----------GTGGGCGCAGCCAAATCCCAGATCTAGAAGTTC--ATCTGTTTCTGTTATGCAATTTACCAGGCGGCT------TCTTTATTTAT---------------CGGACAATGGCTTTTC--------------------------------GAGGAG--GCTTAA-------------TCTTGAACTTAACCTTGG-----------GCT-GCCGATCATGATA---------GTCTTGATTAATGATTTCT---------------------------TT-------TA-AATAATGT-AA---CGC-TCCTTTTCAGCACGAGTAAAGTTC-CGACTTTCCATGTAATTCGCGAGGTCTATGACAGTTSizeHit CountTotal NormTotal
No Reads
droKik1
AAAAAAA-----AACAAAT-TATTAGCAAAATGGTTAGCAG-AAATATAGAAAGGTAAATATTACGGAAAATT-CTAA----------CCGCCTACTTGGCTGT-GTG--AGATTATGCAACGCC----CTCGAGCT------CTGGTCTACATCAGTGGAGCTCCGGATCTTGGCGTGC--ACCTTTCCCGGTTATGCAATTTGA-----------------TTTATTTATCTTCTG------CGCCGGACAATGGCTTCTGTGACGGC-CCCAACTGCAG---------------TGCG--GCATAATCTC-------CAGCTTGACCTTAACCTTGGA-CTGACT---GCT-CCAG-CAGAGATAAAGGCCTGAGCAGTGATTGATGTCCCC--------------------------------------A-A------ATCT----TTGACCTTTCCAGCACGAGTAAAGTGC-CGACTTTCCATGTCATCCGGGAGGTGTACGACAGCTSizeHit CountTotal NormTotal
No Reads
droAna3
ATAAAAAAAAAAAACAAATACTTTGCAAAAATGGTTAGCAG-GAACATAGAAAGGTAAATATTGCGGATGA-----------ATTTGAGCTCTG-AGTTGCTGCAGTG-GAGATTATGCAACGCA----CTTTTTCTCAAACTGCAAGCTGCTTCAGTCAGCGTCTGG----CTTAGTGC--ACCTGATCGGGTTATGCAATTTTGTTTGCGGCT---------TTATTTATCTGCTCTGGACCGACCGGACAATGACTTCGGGGGTATCTC---TCCACTGCA---------C---TGAC--GCTTAATCTCAGAGGGCCTCCATGAACTTAACCTTGC-----------TCT---GCTGTCTGATA---------GCCGTGATTGATGTACTC-----------------------------------------------TTCTTTTTTCT-TGGTCGCAGCACGAGTAAAGTGC-CGACTTTCCATGTAATCCGAGAGGTGTACGATAGCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................................................................................CAATGACTTCGGGGGTATCTC---...............................................................................................................................................................................................................................................2111.001100000
.................ATACTTTGCAAAAATGGTTAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
droBip1
ATAAAAAA--AAAACAAAAACTTTGCGAAAATGGTTAGCAG-GAACATAGAAAGGTAAGTATTGCGGACGA-----------ATTGGAACTCTA-AGATACAGCAGTG-TGGATTATGCAACGTA----CTCTTCCTCAAGCTGCAAGCTACTTGAGTCGGCGTCTGG----CTTAGTGC--ACCTGATCGGGTTATGCAATTTTTTATGCGGCT---------TTATTTATCTGCACTGGAC-AGCCGGACAATGACTTCTGGGGTATCTCTCCACTGCAG---------------TGGG--GCTTAATCTCTGAGGGCGGCCATGAACTTAACCTTG-------------CT-CCGCAGTCAGATA---------GCCGTGATTGATGGAGTC--------------------------------------------TT---CTTTTCTCT-TGTTTGCAGCACGAGTAAAGTTC-CGACTTTCCATGTAATCCGAGAGGTATACGACAGCTSizeHit CountTotal NormTotal
No Reads
dp5
ATGCAAC-----------ATTAATAACAAAATGGTTAGCAG-AAGCGTAGAAAGGTGAGTTTTCCCCCAATTT-AGAACGAG------------GCGTG--AGCGGCA-TAGATTACGCAAGACGCACGTACGGCCA----------GCGAGTGCAGCGGAGTTCTGGAATTCCCAGGGC--ACCTGGTCTGGTTATGCAATTTGTTTCGCGGCTT-----TCTTTATTTATTTG---------CATCAGACCATGGCTTCTGTGAAGGC----AGCTGCAGTCGGGAACTATC----GCG--CCTACG-------------TCGCGACCTTAACCTTGGTAGCGACTGCGGCT-CCGTCTGCAGATA---------ACTGTGATTGATGCATGCC------------------------CCA-TTACGCT-TGAA------T-TC----TTTCTTTATGCAGTACGAGTAAAGTGC-CGACATTCCATGTCATAAGGGAGGTATACGACAGCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................................CCTTAACCTTGGTAGCGACT......................................................................................................................................................................2011.0010100000000
........................AACAAAATGGTTAGCAG-AAGCGTAGAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCATAAGGGAGGTATACGACAGCT2711.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCT-TGAA------T-TC----TTTCTTTAT.......................................................2111.0010100000000
..........................................................GTTTTCCCCCAATTT-AGAACGAG------------....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
..........................................................................................................................................................................................................................................................................................................GCG--CCTACG-------------TCGCGACCTTAACC..................................................................................................................................................................................2311.0010100000000
.........................................................AGTTTTCCCCCAATTT-AGAACGAG------------....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100000
............................................................................AACGAG------------GCGTG--AGCGGCA-.....................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...........................................................................GAACGAG------------GCGTG--AGCGGCA-T....................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..............................................................................CGAG------------GCGTG--AGCGGCA-TAGAT................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..............................ATGGTTAGCAG-AAGCGTAGAAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.........................................................................................................................................................................................................................................................GACCATGGCTTCTGTGAAGGC----A...............................................................................................................................................................................................................................................2211.0010000010000
.......................................................................................................................................................................................................................................TTTG---------CATCAGACCATGGCTTCTG...........................................................................................................................................................................................................................................................2311.0010100000000
.............................................................................................................................................................................................................................................................................C----AGCTGCAGTCGGGAACTATC----G.......................................................................................................................................................................................................................2211.0010000001000
droPer2
ATGCAAC-----------ATTAATAACAAAATGGTTAGCAG-AAGCGTAGAAAGGTGAGTTTTCCCCCCAATTTAGGACGAG------------GCGTG--AGCGGCG-TAGATTACGCAAGACGCACGTACGGCCA----------GCGAGTGCAGCGGAGTTCTGGAATTCCCAGGGC--ACCTGGTCTGGTTATGCAATTTGTTTCGCGGCTT-----TCTTTATTTATTTG---------ACTCAGACCATGGCTTCTGTGGAGGC----AGCTGCAGTC---------GGG----A-----ACG-------------TCGCGACCTTAACCTTGGTAGCGACTGCGGCT-CCGTCTGCAGATA---------ACTGTGATTGATGCATGCC------------------------CCA-TTACGCT-TGAA------T-TC----TTTCTTTATGCAGTACGAGTAAAGTGC-CGACATTCCATGTCATAAGGGAGGTATACGACAGCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................G-AAGCGTAGAAAGGTGAGTTTTCCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000002
....................................................................................................................................................................................................................................................................................................................................................TAGCGACTGCGGCT-CCGTCTG........................................................................................................................................................2111.001000001
............................................GCGTAGAAAGGTGAGTTTTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
....................................................................................................................................................................................................................................................................................................................................................TAGCGACTGCGGCT-CCGTCT.........................................................................................................................................................2011.001010000
.................................GTTAGCAG-AAGCGTAGAAAGGTGAGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
.................................................................................................................................................................................................................................................................CTTCTGTGGAGGC----AGCTGCAG........................................................................................................................................................................................................................................2111.001010000
..........................CAAAATGGTTAGCAG-AAGCGTAGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
droWil2
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACCTTAAACTTGAA----------CTTGCCATAGAAAGATA---------ACTGTGATTGATAACTTTTCTCCTTCCCTCTCTCTCTCTCACTCCT-TTTCTCTTTC-TCTCTCTTTC-----TCATCTCTTTCAGCACCAACAAAGTGC-CCACTTTTCATGTGATTCGTGAGGTTTACGACAGTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGC-CCACTTTTCATGT.......................1911.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTCATGTGATTCGTGAGGT...........2211.00101000
droVir3
TTAAGATA-----------TGGACAATAAA---------------TATATAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTT-TGT-----------------------------------T-------TG-AA-------TA----TGTGTTTGTACAGTACAGGCAAGCAGC-CAACATTTCATGTGATACGTGAAGTCTACGACAGTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTTTGTACAGTACAGGA............................................2012.002000000000000000000000000000000000200000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATACGTGAAGTCTACGAC....2111.001000000000000000000000000000000000000000000000000000000000000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGATACGTGAAGTCTACGACAG..2411.001000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTGATACGTGAAGTCTACGACA...2511.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGCAAGCAGC-CAACATTTCATGTG......................2711.001001000000000000000000000000000000000000000000000000000000000000
.......A-----------TGGACAATAAA---------------TATATAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T....................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
droMoj3
TCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGTTATTACAGTACAGGCAAGCAGC-CAACATTTCATGTCATTCGAGAAGTCTACGACAGTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAGTGCAGGCAAGCAAC-CAACATTTCATGTCATACGTGAAGTCTATGACAGTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 05:28 AM