ID:dsi_9280 |
Coordinate:3l:16278005-16278154 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
intergenic
No Repeatable elements found
|
TTGGCTTGGCCCAGACTTTTCAGTTGCACTGCGCCAATTTGGCTAACAAGAAGCAACAAACAAAGAGCAAAGGCACCACCACCGCCACACCGAACAACCAAAAACAACAAATAGCAATAATAATATTGCATTCTCGACAATTTCTCTGATTCTTCTCCGTTTGTAATTCAACGTTTTTCCCCTCTTTTCTTTCGTTTCAGACATGGCACAAAACGTGTTTCAAATGCACAGAATGCGGCATGACGCTCAA
**************************************************.....((((((...(((....(((.........)))...........................((((((....)))))).........................))).)))))).....((((...................))))....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M053 female body |
SRR553486 Makindu_3 day-old ovaries |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................................................................ACAGAATGCGGCATGACGCT... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................................................CATTCTCGACAATTTCGG........................................................................................................ | 18 | 2 | 5 | 0.20 | 1 | 0 | 1 | 0 |
| .........................................................................................................................................................CCTCGGTTTGTAATCCAAC.............................................................................. | 19 | 3 | 16 | 0.06 | 1 | 1 | 0 | 0 |
| ...............................................................AGAACAAGGGCACCACCA......................................................................................................................................................................... | 18 | 2 | 18 | 0.06 | 1 | 0 | 0 | 1 |
|
AACCGAACCGGGTCTGAAAAGTCAACGTGACGCGGTTAAACCGATTGTTCTTCGTTGTTTGTTTCTCGTTTCCGTGGTGGTGGCGGTGTGGCTTGTTGGTTTTTGTTGTTTATCGTTATTATTATAACGTAAGAGCTGTTAAAGAGACTAAGAAGAGGCAAACATTAAGTTGCAAAAAGGGGAGAAAAGAAAGCAAAGTCTGTACCGTGTTTTGCACAAAGTTTACGTGTCTTACGCCGTACTGCGAGTT
**************************************************.....((((((...(((....(((.........)))...........................((((((....)))))).........................))).)))))).....((((...................))))....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR902009 testis |
SRR553487 NRT_0-2 hours eggs |
SRR553488 RT_0-2 hours eggs |
GSM343915 embryo |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................GGCTTGTTGGTTTTTGTTGTT............................................................................................................................................ | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ............................................................................GTGGTGGCGGTGTGGCTT............................................................................................................................................................ | 18 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...................................................................................................................................................................................CGGAGATAAGAAAGCAAA..................................................... | 18 | 2 | 9 | 0.11 | 1 | 0 | 0 | 0 | 1 | 0 |
| ......................................................................................................................................................................AAGTTGCAAATAGGG..................................................................... | 15 | 1 | 9 | 0.11 | 1 | 0 | 0 | 1 | 0 | 0 |
| ...........................................................................................................................................................................................................................AGGTTACGTGTCTTA................ | 15 | 1 | 11 | 0.09 | 1 | 0 | 0 | 0 | 0 | 1 |
| ................................CGGTTAAAACGATTG........................................................................................................................................................................................................... | 15 | 1 | 14 | 0.07 | 1 | 0 | 1 | 0 | 0 | 0 |
| .................................................................................................................................................................................................CAATGTCTGTACCCTG......................................... | 16 | 2 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 |
Generated: 04/24/2015 at 04:02 AM