ID:

dsi_9225

 Coordinate:

2r:15950684-15950833 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.2 -6.0 -6.0

Flybase annnotation

five_prime_UTR [2r_15950668_15950683_-]; CDS [2r_15950572_15950667_-]; exon [2r_15950572_15950683_-]; intron [2r_15950684_15958155_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CGCTCTCTGAGAGTCATTCTATATCTCTCTCTTTTGGGTGGTTGCATTGCACTCTCTTCGTTTTCCACTCTCTCTTTTTTGCCACCCCCTTTTTGGTGCTACTGCCCTGCAGTTTTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTCAAGTTGAAGAAGAACTTATACTAAATTTGGGAAAAAATTGTTTAATTGCAGCATTTTAACTGAAATCATGACTGAAGTTGAGCAACCGCCACAGAATGGCA
***********************************************************************************************************.........................((((((((((........)))))..)))))...************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 M025
embryo
 O001
Testis
 O002
Head
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
......................................................................................................................................................................................................................TCATGACTGAAGTTGAGCAACCGCCACA........ 28 0 1 2.00 2 0 0 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................GTCAAGTTGAAGAAGAACT..................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AATCATGACTGAAGTTGAGCAACC.............. 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................GAGCGTCAAGTTGAAGAA.......................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................................GCTGAGCGTCAAGTTGAAGAAGAAC...................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GAAATCATGACTGAAGTTGAGCAACC.............. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................ATCATGACTGAAGTTGAGCAACCGCCACA........ 29 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................ATGACTGAAGTTGAGCAACCGCCAC......... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................ATCATGACTGAAGTTGAGCAACCGCCAC......... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................ATCATGACTGAAGTTGAGCAACCGCC........... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.......................................GGTTGCATTGCACTCTC.................................................................................................................................................................................................. 17 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGCAGTTTTTAAGGTCAGTCGAAAATT.................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TCAAGTTGAAGAAGAACT..................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TAAGGTCAGTCGAAAATTTTCCAGC............................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TTGTTTAATTGCAGCATTTTAACTGAA..................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TGAGCAACCGCCACAGAATG... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................................TGAAATCATGACTGAAGTTGAGCAAC............... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................................TGACTGAATTCATGACTGAA......................... 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0
............................................................................................................................................CTGAGAGTCAAGTTGA.............................................................................................. 16 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.............TCATTCTATTTCTCTCTCCT......................................................................................................................................................................................................................... 20 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................AGTTTTCCAGCTGAGTGT...................................................................................................... 18 2 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 1
.................................................................................................................................................................................................................TGAAATGATGACTGA.......................... 15 1 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GCGAGAGACTCTCAGTAAGATATAGAGAGAGAAAACCCACCAACGTAACGTGAGAGAAGCAAAAGGTGAGAGAGAAAAAACGGTGGGGGAAAAACCACGATGACGGGACGTCAAAAATTCCAGTCAGCTTTTAAAAGGTCGACTCGCAGTTCAACTTCTTCTTGAATATGATTTAAACCCTTTTTTAACAAATTAACGTCGTAAAATTGACTTTAGTACTGACTTCAACTCGTTGGCGGTGTCTTACCGT
*************************************************************************************.........................((((((((((........)))))..)))))...*********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 O001
Testis
 SRR553488
RT_0-2 hours eggs
........................................................................AGGAAAAACGGTGGGG.................................................................................................................................................................. 16 1 14 2.86 40 0 40 0 0
..............GTAAGCTATAGAGAG............................................................................................................................................................................................................................. 15 1 8 1.38 11 11 0 0 0
........................................................................................................................................................................................................................TACTGACTTCAACTCGTTGGC............. 21 0 1 1.00 1 0 0 1 0
......AACTCTCAGTGAGCTATAGAGAG............................................................................................................................................................................................................................. 23 3 1 1.00 1 1 0 0 0
..........CTCGGTAAGCTATAGAGAG............................................................................................................................................................................................................................. 19 2 1 1.00 1 1 0 0 0
....................................................AGAGAAGCAAGAGGTTAGA................................................................................................................................................................................... 19 2 4 0.25 1 0 0 0 1
....................................................................................................................................AGAAGGTCGACTCGCA...................................................................................................... 16 1 5 0.20 1 0 1 0 0
.......................................................................GAGGAAAAACGGTGGGG.................................................................................................................................................................. 17 1 5 0.20 1 0 1 0 0
.............................................................................................ACCACAAAGGCGGGACGTCA......................................................................................................................................... 20 3 5 0.20 1 1 0 0 0
................................................................................................ACGATGATGGTACGTCA......................................................................................................................................... 17 2 7 0.14 1 1 0 0 0
.......................................................................GAGGAAAAACGGTGGG................................................................................................................................................................... 16 1 17 0.06 1 0 1 0 0
........................................................................................................................................................AAATTCTTCTTGAAT................................................................................... 15 1 20 0.05 1 0 0 0 1
....................................................................................................................................AGAAGGTCGACTCGC....................................................................................................... 15 1 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:15950634-15950883 - dsi_9225 C-GCTCTC-----TGAGAGTCATTC-TATAT------------CTC--TC-----------T-C--TT-------TTGGGTGGTT---------------------------------------------------------------------------------GCATT-GCACTCTCT----TCGTTTTCCA------------------------------------------CTC--TC-TC----------T------TTTT------TGCCACCCCCTTTTT-GG----------T--G---------------------------------------CTACTGCCCTGCAGTT-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTCAAGTTGAA---------------GAAGAACTTAT-----ACT---------A---------------------------------------------------AATT-----TGGGA-AA--AAA------------------------------------------TT-GTTTAATTGCAGCATTT-TAAC---------------------------TGAA--------------------------ATCATGACTGAAGTTGAGCAACCGCCACAGAATGGCA
droSec2 scaffold_1:12811276-12811523 - C-GCTCTC-----TGAGAGTCGTTC-TATAT------------CT----C-----------T-C--TT-------TTGGGTGGTT---------------------------------------------------------------------------------GCATT-GCACTCTCT----TTGTTTTCCA------------------------------------------CTC--TC-TC----------T------TGTT------TGCCACCCCCTTTTT-GG----------T--G---------------------------------------CTACTGCCCTGCAGTC-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTCAAGTTGAA---------------GAAGAACTTAT-----ACT---------A---------------------------------------------------AATT-----CGGGA-AA--AAA------------------------------------------TT-GTTTAATTGCAGCATTT-TAAC---------------------------TGAA--------------------------ATCATGACTGAAGTTGAGCAACCGCCACAGAATGGCA
dm3 chr2R:15298727-15298981 - C-GCTCTC-----TGAGAGTCATTC-CATAT------------CT----C------TC---T-C--T-----------ATTGGTT---------------------------------------------------------------------------------GCATT-GCATTCTCT----TCGTTTTCCA------------------------------------------CTC--TC-TC----------T------TGTT------TGCCACCCCCTTTTT-GG----------T--G---------------------------------------CTACTGCCCTGCAGTT-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTCAAGTTGAA---------------GAAGAACTTAT-----TCT---------A---------------------------------------------------AATT-----CGGGA-AA--AA-C----------CC---------TTTT--------TC-----TCC-ATTTAATTGCAGCATTT-TAAC---------------------------TGAA--------------------------ATCATGACTGAAGTTGAGCAACCGCCACAGAATGGCA
droEre2 scaffold_4845:9497299-9497560 - C-GCTCTC-----TGAGAGTC-----------------------TCCCTC-----------T-C--GT-------TTGGGTGGTT---------------------------------------------------------------------------------GCACT-GCACTCTCT----TCGTTTTCCA------------------------------------------CTC--TC-TC----------T------TGTT------TGCCACCCCCTTTTT-GG----------T--G---------------------------------------CTACTG-CCTGCAGTT-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTCAAGTTGAA---------------GAAGAACTTAT-----TCT---------A---------------------------------------------------AATT-----G-GGA-AAAAA--T-----------C---------T--T--------CC-----TCC-ATTTAATTGCAGCATTT-TAAC---------------------------TGAATTAC---------AAG--GGATATAAATCATGACTGAAGTTGAGCAACCGCCACAGAATGGCA
droYak3 2R:13877426-13877693 + C-GCTCTC-----TGAGGGTCTCTCT-----------------CTC--TC-----------T-C--GT-------TTGGGTGGTT---------------------------------------------------------------------------------GCACT-GCACTCTCT----TCGTTTTCCA------------------------------------------CTC--TC-TC----------T------TGTT------TGCCACCCCCTTTTT-GG----------T--G---------------------------------------CTACTGCCCTGCAGTT-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTCAAGTTGAA---------------GAAGAACTTAT-----CCT---------A---------------------------------------------------AATT-----G-GGA-AAA-AA-C----------TC---------T--T--------CC-----GTC-ATTTCATTGCAGCATTT-TAAC---------------------------TAAAATAC---------AAG--GGATATAAATCATGACTGAAGTTGAGCAACCGCCACAGAATGGCA
droEug1 scf7180000409474:2658090-2658386 + C-ACTCTC-----TGAGAGA-----------------------CTC--TC-----------T-C--AC-------TTGGGTGGTT---------------------------------------------------------------------------------GCACT-CCAATCTCT----C----TCTCTCTCTCTTTTCCATTCTCTCTCTTACTATCCACGACTCTCTG--TC--TC-TC----------T------TGTT------TGCCACCCCCTTTTT-GG----------T--G---------------------------------------CTACTGCCCTGCAGTT-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTTAAGTTCAA---------------GAAGCACTTTT------CT---------A---------------------------------------------------AATA-----A-AGA--AAAA--C-----------C---------T--T--------CCCC---TTC-ATTTAATTGCAGCATTT-TAAC---------------------------TGAAATAC---------AAG--AAAAATAAATCATGACTGAAGTTGAGCAACCGCCACAGAATGGAA
droBia1 scf7180000302143:2769785-2770044 - C-ACTCTC-----TGAGAGT-------------------------C--TC-----------G-A--AC-------TCGGGTGGTT---------------------------------------------------------------------------------GCGCT-ACACTCTCT----T-----TTCA----------------------------------CTCTCTT--CC--TC-TC----------T------TGTC------TGCCACCCCCTTTTT-GG----------T--G---------------------------------------CTAGTGGCCTGCACTT-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTTAAGTTGAA---------------GAAGTACTTCG-----CAG---------A---------------------------------------------------AATA-----A-AGA---AAA--A-----------C---------T--T--------CCCT---TTC-TTTGATTTGCAGCATTT-TAAC---------------------------TAAAATAC---------AAA--GGAAATAAATCATGACTGAAGTTGAGCAACCGCCACAGAATGGCA
droTak1 scf7180000415379:152012-152280 - C-ACTCTC-----TGAGAGG-----------------------CTC--TC-----------T-T--AC-------TTGGGTGGTT---------------------------------------------------------------------------------GCACT-ACGCTCTCT----T----TTTCA----------------------------------CTCTATCTCTC--TT-TC----------T------TGTT------TGCCACCCCCTTTTT-GG----------T--G---------------------------------------CTACTGCCCTGCAGTT-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTCAAGTTGAA---------------GAAGAACTTTT-----CCT---------A---------------------------------------------------AATA-----A-AGAAAA--AAAA-----------C---------C--T--------CCCT---TTC-ATTTAATTGCAGCATTT-TAAC---------------------------TGAAAAAC---------AAA-AGGAAATAAATCATGACTGAAGTTGAGCAACCGCCACAGAATGGCA
droEle1 scf7180000491258:23587-23848 + C-ACTCTC-----TGAGAGA-----------------------CTC--TC-----------T-T--AC-------TTGGGTGGTT---------------------------------------------------------------------------------GCACT-GCACTCTTT----CTCTCTTGCT--------------------------------------CTCTCGC--TC-TC----------T------TTTT------TGCCACCCCCTTTTC-CG----------A--------------------------------------------ACTGCCCTGCAGTT-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTTAAGTTGAA---------------GAAGCACTTTG-----CCT---------A---------------------------------------------------AATA-----A-A---AAAAA--C-----------C---------A--T--------ACCC---TTC-ATTTAATTCCAGCATTT-TTAC---------------------------TGAAATAA---------AAG--GGAAATAAATCATGACTGATGTTGAGCAACCGCCACAGAATGGCA
droRho1 scf7180000772433:31467-31728 + C-ACTCTC-----TGAGAGA-----------------------CTC--TC-----------T-T--AC-------TTGGGTGGTT---------------------------------------------------------------------------------GCACT-GCACTCTCT----C----TTCCA----------------------------------CTCTCTATCTC--TC-TC----------T------TGTT------TGCCACCCCCTTTTC-CT----------A--------------------------------------------GCTGCCCTGCAGTT-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTTAAGTTGAA---------------GAAGCACTTTG-----CCT---------A---------------------------------------------------AATA-----T-A---AAAAA--C-----------C---------G--T--------CCCC---TTC-ATTTAATTGCAGCATTT-TAAC---------------------------AGAAGTAA---------AAG--GAAAATAAATCATGACTGATGTTGAGCAACCGCCACAAAATGGCA
droFic1 scf7180000454039:586924-587197 - C-ACTCTC-----TGAC--TCTCTC-TAGA-------------CTC--TC-----------T-T--AC-------TTGGGTGGTT---------------------------------------------------------------------------------GCACT-GCACTCTCTCTTTTCGTTCTC-------------------------------------T--CTCTCTC--TC-TC----------T------TATT------TGCCACCCCCTTTTT-CG----------T--G------------------------------------------CTGCCCTGCAGT--TTTAAGGTCAGTTGAAAATTTTCCAGCTGAGCGTTAAGTTCAA------T-------AGAAGCACTTTG-----CCG---------A---------------------------------------------------AATT-----AATGAAAAAAA--A-----------C---------T--T--------CCC------C-ATTTGATTGCAGCATTT-TAAC---------------------------TGAACCAC---------AAA--AGTAAAAAAACATGACTGAAGTAGAGCAACCGCCACAGAATGGCA
droKik1 scf7180000302471:1554148-1554425 - T--CTGAC-----GGAGAGAG--------AA------------CTC--TC-----------T-TCCAT-------TTGGGTGGTT---------------------------------------------------------------------------------GCACT-TTACTCTCT----C----TTTCT----------------------------------CTGTCAGCCGCTCTC-AG----------T------GTTT------TGCCACCCCCTTTTT-CG----------T--T----T------GT--T-----------------------CAACTGCCTTGCAGTTTTTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTAAAGTTGAT----GAA-------AGAAACAC--CGCCTAACG----------------------------------------------------------------TA-----A-AGT---TTA--T-----------C---------T--T--------CTC----CGT-TCTTTATTGCAGCATTT-TAAC---------------------------TGAAATAC---------AAA--AGAAATAAATCATGACTGAAGTCGAGCAACCGCCACAAAACGGCA
droAna3 scaffold_13266:1964728-1965080 + C-GCTCTCTTCTCTGAGTGCTACTCT---CTCTCTCGGAGAGAGTA--TC-----------GGC--AC-------TTGGGTGGTTGCGTTGCATTCGCTCTCTCTTCCCGCTCTCTTTCACTCTCTTTGA-CTCTCTTTGACTCTCTTATGCTCCCTTGTGCGCT---------------------------------------------------------------------------------CTTGCGCTCTCTGTGTCT--TGGGCTGAAGCCACCCCCTTTTTTCG----------T--G------------------------------------------CTGCCCTGCACTT-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTAAAGTTCAA---------------GAAACACTTTT-----TCT---------A-------------AAAACAAATTTT------------------------------------------------------------T---------A--T--------TC-----CAT-TTTTTTTTGCAGCATTTTTAAC---------------------------TAAAATAC---------AAA--AGAAATAAATCATGACTGAAGTCGAGCAACCGCCACAAAATGGCA
droBip1 scf7180000396730:2950477-2950790 + C-GCTCTCCGCTCTGAGTGGCTCTCT---------CTGTGAGAGTG--TCTCGCCCTCAGCGGC--AC-------TTGGGTGGTT---------------------------------------------------------------------------------GCATT-GCATTCTCT----T----CTCCG----------------------------------CTCTCTTTCGC--TC-TCTTGCGCTCTCG-AGTGC--TGGGCCG-TGCCACCCCCTTTTC-TG----------T--G----C------------------------------G----CGCTGCCCTGCACTT-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTAAAGTTGAA----GAAACT--A---AAACACTTTT-----CCT---------A---------------------------------------------------AA-------------------AC---GGTTTTTTC---------T--T--------CT------TCGATT--TTTGCAGCATTTTTAAC---------------------------AAAA-------------AAA--AGGAATAAATCATGACTGAAGTCGAGCAACCGCCACAAAATGGCA
dp5 3:2768406-2768730 + AAGTTCTC-----TCAGCGCTATTC------------------CTC--TC-----------T-C--GCTTAAATTTTGGGTGGTT---------------------------------------------------------------------------------GTGTTTGCCCGCTCT----C----TCTCG------------------------------------------CTC--TC-TC----------T------CTGT------TGCCACCCCCTTTTTTCCATTTCGCATGTGTTTGTGTGTGTGTGTACACAACGG-GAACAGTGTAGAA----CGGTGCTCTGCCGT--TTTAAGGTCAGTTGAAAATTTTCCAGCTGAGCGTAAAGTAAGCGTACAAAATGTGAA-GGAAAAGCAAT-----TGT---------A---------------------------------------------------A-TA-----T-A---AAATT--C----------CC---------TTTT--------CC-----CCT-TTTCGTTTGCAGCATTT-AAAC---------------------------AGAA---------------A--AGGAAGCAAACATGACTGAAGTCGAGCAACCGCCACAGAATGGCA
droPer2 scaffold_2:2958376-2958704 + AAGTTCTC-----TCAGCGCTATTC------------------CTC--TC-----------T-C--GCTTAAATTTTGGGTGGTT---------------------------------------------------------------------------------GTGTTTGCCCGCTCT----C----TCTCG----------------------------------CTCTCT--CTC--TC-TC----------T------CTGT------TGCCACCCCCTTTTTTCCATTTCGCATGTGTTTGTGT--GTGTGTACACAACGG-GAACAGTGTAGAA----CGGTGCTCTGCCGT--TTTAAGGTCAGTTGAAAATTTTCCAGCTGAGCGTAAAGTAAGCGTACAAAATGTGAA-GGAAAAGCAAT-----TGT---------A---------------------------------------------------ATTT-------A---AAATA--C----------CC---------TTTT--------CC-----CCT-TTTCGTTTGCAGCATTT-AAAC---------------------------AGAA---------------A--AGGAAGCAAACATGACTGAAGTCGAGCAACCGCCACAGAATGGCA
droWil2 scf2_1100000004558:1501908-1502255 + G-GCTCTCTT----ATCACGCTCT-------------------------T-TGCTCTCTTCAAC--TC-------TCTGGCACTT--------------------------------------GCTTTGCTTTCTCTCTATTTCTCAAATAATTTTTTGGGTGGTTGCGCC-TTACTCTCT----------------------------------------------------------------------------------------------CCCACCCTC---------------------------------------GAGAG-AAAAA---AAAAA----TTATATGCTG--------------CAGTTGTAGATTTTGCAGCCCAGTGAGAAGTAGGAAAATAAA-------AGAAGAATTTT-------CT----ATATTAAATTATAATGTATTAAAAAAATTCT------------------------------------------------------------------TATTTT-T--------TT-----AAT-GTTTATTTACAGCATTTGCAATATAAGAGGAAAATATATAAAGTGTAATAGAAACGTAAAACGAAAAAA--CTAATTGAAAGATGACTGAAATTGAGCAACCGCCACAAAATGGCA
droVir3 scaffold_12875:11165071-11165365 + GCACTCTC-----TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCT----T----TCCCA------------------------------------------CTC--CTTTG----------C------TGTT-GGCA-CAACACCCCCTTTTC-AT-------------------------------AACGG-AAACC---AAAAG----TTTTGGCCTGCACTT-TTTAAGGTCAGTTGAAAATTTT-CAGTTGG-C---AAAT------------------------ACAT-------------------------------ATTAAGAAAATACACATCCATTTTATTTTTATTTA-----GATTAAAAAA-A---AAAAA--ACTA--------ATTGTGTATTTTTGTTTG-CCTTGCATACTTT-GTGTATTTTTAGCATTT-GAAC---------------------------TAAAATATAAAAAAAAA--AAATAAACTGAAACATGACTGAGGTAGAGCAACCGCCACAGAACGGCA
droMoj3 scaffold_6496:15761149-15761442 - C-TCTCTC-----TCTT--T---------------------------------------------------------------------------------------------------------------------------------------------------------CGCTCTCT----C----TCGCA----------------------------------TTGTCGG--TG--TC-TC----------T------CTTT------TGACACCCTATTTT---G----------T--T--------------CATAACGG-AAACC---AAAAG----TTTTGGCCTGCACTT-TTTAAGGTCAGTTGAAAATTTT-CAGCTGAGCCTGTCGAAAGCAA----AAT-----------ATTT-------ATAGATA-TAT-A-------------AAAACTAATTTG------TA------TTACTTTAAGTAAATA-----A-A---ATAAA-AA-----------GTTGCGTATTTTTT--------TG-----TGT-TTTTGTTTTTAGCATTT-GAAC---------------------------TAAATTTA------AATAAA--TTAACTGAAACATGACTGACGTTGAGCAACCGCCACAGAATGGCA
droGri2 scaffold_15245:13568397-13568709 - G--CTTTC-----TGTCATTCTCT-------------------------C------------------------------------------------------------------------------------------------------------------------------TCTCT----C----TTTCT----------------------------------CTCTCGGCCTC--TC-TC----------G------ATTT------TGCCACCCCCTTTTT-CC-----------------------------ACAACTGTAAACC---AGAAATGGTTTTTGGCTTGCACTT-TTTAAGGTCAGTTGATAATTTT-CAGCTGAGCCCAACGAAAGCAAAAGAAATTTGAA-AA--TACATTT-----ACAAGCATTAT-A-------------------A----------ATTTGATACTTATTTA-----A--------------------A-------------TTGTTTATTTTTGTGTATGCTTGCT---TGC-GTCTATTTTTAGCATTT-CAAG---------------------------TAAATTATAATAAAGC-A-AACTAAGAAGAAACATGACTGAGGTAGAGCAACCGCCACAGAACGGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
C-GCTCTC-----TGAGAGTCATTC-TATAT------------CTC--TC-----------T-C--TT-------TTGGGTGGTT---------------------------------------------------------------------------------GCATT-GCACTCTCT----TCGTTTTCCA------------------------------------------CTC--TC-TC----------T------TTTT------TGCCACCCCCTTTTT-GG----------T--G---------------------------------------CTACTGCCCTGCAGTT-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTCAAGTTGAA---------------GAAGAACTTAT-----ACT---------A---------------------------------------------------AATT-----TGGGA-AA--AAA------------------------------------------TT-GTTTAATTGCAGCATTT-TAAC---------------------------TGAA--------------------------ATCATGACTGAAGTTGAGCAACCGCCACAGAATGGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGACTGAAGTTGAGCAACCGCCACA........2812.00200000011000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGTTGAA---------------GAAGAACT...............................................................................................................................................................................................................................................................1912.00220000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------ATCATGACTGAAGTTGAGCAACC..............2411.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................GAGCGTCAAGTTGAA---------------GAA....................................................................................................................................................................................................................................................................1811.00100000100000000000
...................................................................................................................................................................................................................................................................................................................................................................................................GCTGAGCGTCAAGTTGAA---------------GAAGAAC................................................................................................................................................................................................................................................................2511.00110000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA--------------------------ATCATGACTGAAGTTGAGCAACC..............2611.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATGACTGAAGTTGAGCAACCGCCACA........2911.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACTGAAGTTGAGCAACCGCCAC.........2511.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATGACTGAAGTTGAGCAACCGCCAC.........2811.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATGACTGAAGTTGAGCAACCGCC...........2611.00100100000000000000
.................................................................................GGTT---------------------------------------------------------------------------------GCATT-GCACTCTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................TGCAGTT-TTTAAGGTCAGTCGAAAATT.............................................................................................................................................................................................................................................................................................................2711.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TCAAGTTGAA---------------GAAGAACT...............................................................................................................................................................................................................................................................1811.00110000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TAAGGTCAGTCGAAAATTTTCCAGC......................................................................................................................................................................................................................................................................................................2511.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-GTTTAATTGCAGCATTT-TAAC---------------------------TGAA--------------------------.....................................2711.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCAACCGCCACAGAATG...2011.00100001000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAA--------------------------ATCATGACTGAAGTTGAGCAAC...............2611.00100000000000010000
droSec2
C-GCTCTC-----TGAGAGTCGTTC-TATAT------------CT----C-----------T-C--TT-------TTGGGTGGTT---------------------------------------------------------------------------------GCATT-GCACTCTCT----TTGTTTTCCA------------------------------------------CTC--TC-TC----------T------TGTT------TGCCACCCCCTTTTT-GG----------T--G---------------------------------------CTACTGCCCTGCAGTC-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTCAAGTTGAA---------------GAAGAACTTAT-----ACT---------A---------------------------------------------------AATT-----CGGGA-AA--AAA------------------------------------------TT-GTTTAATTGCAGCATTT-TAAC---------------------------TGAA--------------------------ATCATGACTGAAGTTGAGCAACCGCCACAGAATGGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTTGAGCAACCGCCACAG.......2111.0010010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGACTGAAGTTGAGCAACCGCC...........2411.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGAGCGTCAAGTTGAA---------------G......................................................................................................................................................................................................................................................................2111.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA--------------------------ATCATGACTGAAGTTGAGC..................2211.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TAAC---------------------------TGAA--------------------------ATCATGACTGAAGTTG.....................2511.0011000
dm3
C-GCTCTC-----TGAGAGTCATTC-CATAT------------CT----C------TC---T-C--T-----------ATTGGTT---------------------------------------------------------------------------------GCATT-GCATTCTCT----TCGTTTTCCA------------------------------------------CTC--TC-TC----------T------TGTT------TGCCACCCCCTTTTT-GG----------T--G---------------------------------------CTACTGCCCTGCAGTT-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTCAAGTTGAA---------------GAAGAACTTAT-----TCT---------A---------------------------------------------------AATT-----CGGGA-AA--AA-C----------CC---------TTTT--------TC-----TCC-ATTTAATTGCAGCATTT-TAAC---------------------------TGAA--------------------------ATCATGACTGAAGTTGAGCAACCGCCACAGAATGGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACTGAAGTTGAGCAACCGCCAC.........25112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGAAGTTGAGCAACCGCCACA........2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................GTCGAAAATTTTCCAGCTGAGCGT...............................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------TC-----TCC-ATTTAATTGCAG........................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATGACTGAAGTTGAGC..................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................TCT----TCGTTTTCCA------------------------------------------CTC--TC-TC----------T------TGT................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCAAGTTGAA---------------GAAG...................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCAACCGCCACAGAATGGCA2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACTGAAGTTGAGCAACCGC............2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGACTGAAGTTGAGCAACCGCC...........2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TCATTC-CATAT------------CT----C------TC---T-C--T-----------ATTGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TTAAGGTCAGTCGAAAATTTTCCAGC......................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACTGAAGTTGAGCAAC...............1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TAAGGTCAGTCGAAAATTTTCCAGC......................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGTTGAGCAACCGCCACAGC......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TAAC---------------------------TGAA--------------------------ATCATGACTGAAGT.......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................................................................................................................................................................................................................GTT-TTTAAGGTCAGTCGAAAA...............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TTAAGGTCAGTCGAAAATTTTCCAG.......................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTTGAGCAACCGCCAC.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGACTGAAGTTGAGCAACCGCCACA........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATGACTGAAGTTGAGCAACCGCCA..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAC---------------------------TGAA--------------------------ATCATGACTGAAGT.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTT-TAAC---------------------------TGAA--------------------------ATCATGACTGAAGT.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAAGTTGAGCAACCGCCACAG.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TT-TTTAAGGTCAGTCGAAAATTTTC..........................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAA--------------------------ATCATGACTGAAGTTGAGCAAC...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-C----------CC---------TTTT--------TC-----TCC-ATTTAA..............................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------ATCATGACTGAAGTTGAGCAACCGC............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---------------------------TGAA--------------------------ATCATGACTGAAGT.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CGTCAAGTTGAA---------------GAAGAACT...............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------ATCATGACTGAAGTTGA....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGAAGTTGAGCAACCGC............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------TC-----TCC-ATTTAATTGCAGCATTT-TAAC---------------------------...................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGAAGTTGAGCAACC..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TTAAGGTCAGTCGAAAATTTTCCA........................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGTTGAGCAACCGCCACAGAAT....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................GCAGTT-TTTAAGGTCAGTCGAAAATT.............................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAC---------------------------TGAA--------------------------ATCATGACTGAAGTTGAG...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGTTGAGCAACCGCCACA........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAAGTTGAGCAACCG.............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAC---------------------------TGAA--------------------------ATCATGACTGAAGTT......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAA--------------------------ATCATGACTGAAGTTG.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAA--------------------------ATCATGACTGAAGTTGAGC..................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TAAGGTCAGTCGAAAATTTTCCAGCTGA...................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TT-TTTAAGGTCAGTCGAAAATTTTCCAGC......................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACTGAAGTTGAGCAACCGCCACA........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TAAC---------------------------TGAA--------------------------ATCATGACTGAAGTT......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TTCCAGCTGAGCGTCAAGTTGAA---------------GAAGA..................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................CAAGTTGAA---------------GAAGAACTT..............................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGAAGTTGAGCAACCGCC...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGACTGAAGTTGAGCAACCG.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAA--------------------------ATCATGACTGAAGTTGAGCA.................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGTTGAGCAACCGCCAC.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTGAAGTTGAGCAACCGCCACA........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACTGAAGTTGAGCAACCGCCA..........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------------------------ATCATGACTGAAGTTGAGCAACCGCC...........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................T-TTTAAGGTCAGTCGAAAATTT............................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACTGAAGTTGAGCAACC..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGCAACCGCCACAGAAT....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGACTGAAGTTGAGCAAAA..............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTTGAGCAACCGCCACAGAATGG..2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----------CC---------TTTT--------TC-----TCC-ATTTAATTG...........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AGGTCAGTCGAAAATTTT...........................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TGCCCTGCAGTT-TTTAAGGTCAGTCGAAA................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---------------------------TGAA--------------------------ATCATGACTGAAGTTGACT..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................GCAGTT-TTTAAGGTCAGTCG...................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TTTAAGGTCAGTCGAAAATT.............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................GCATT-GCATTCTCT----TCGTTTTCCA------------------------------------------CT............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................AGTTGAA---------------GAAGAACTTAT-----TCT---------...........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................GCATT-GCATTCTCT----TCGTTTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGCAACCGCCACAGAATGGC.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACTGAAGTTGAGCAACCGCC...........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
C-GCTCTC-----TGAGAGTC-----------------------TCCCTC-----------T-C--GT-------TTGGGTGGTT---------------------------------------------------------------------------------GCACT-GCACTCTCT----TCGTTTTCCA------------------------------------------CTC--TC-TC----------T------TGTT------TGCCACCCCCTTTTT-GG----------T--G---------------------------------------CTACTG-CCTGCAGTT-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTCAAGTTGAA---------------GAAGAACTTAT-----TCT---------A---------------------------------------------------AATT-----G-GGA-AAAAA--T-----------C---------T--T--------CC-----TCC-ATTTAATTGCAGCATTT-TAAC---------------------------TGAATTAC---------AAG--GGATATAAATCATGACTGAAGTTGAGCAACCGCCACAGAATGGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCAACCGCCACAGAATGGC.2211.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATGACTGAAGTTGAGCAACCGCC...........2611.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAATCATGACTGAAGTTGA....................2111.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTAC---------AAG--GGATATAAATCATG...............................2311.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAATCATGACTGAAGTTGAGC..................2311.0010100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCATGACTGAAGTTGAGC..................2111.0011000000
droYak3
C-GCTCTC-----TGAGGGTCTCTCT-----------------CTC--TC-----------T-C--GT-------TTGGGTGGTT---------------------------------------------------------------------------------GCACT-GCACTCTCT----TCGTTTTCCA------------------------------------------CTC--TC-TC----------T------TGTT------TGCCACCCCCTTTTT-GG----------T--G---------------------------------------CTACTGCCCTGCAGTT-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTCAAGTTGAA---------------GAAGAACTTAT-----CCT---------A---------------------------------------------------AATT-----G-GGA-AAA-AA-C----------TC---------T--T--------CC-----GTC-ATTTCATTGCAGCATTT-TAAC---------------------------TAAAATAC---------AAG--GGATATAAATCATGACTGAAGTTGAGCAACCGCCACAGAATGGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATTT-TAAC---------------------------TAAAATAC---------AAG--GGA..........................................2511.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGACTGAAGTTGAGCAACCGCC...........2511.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATGACTGAAGTTGAGC..................1911.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAC---------AAG--GGATATAAATCATGACTGAAGT.......................2911.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGACTGAAGTTGAGCAACCGCCACA........2811.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAC---------------------------TAAAATAC---------AAG--GGATATA......................................2211.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGACTGAAGTTGAGCAACCGC............2311.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATAAATCATGACTGAAGTTGAGC..................2611.00100000010000
droEug1
C-ACTCTC-----TGAGAGA-----------------------CTC--TC-----------T-C--AC-------TTGGGTGGTT---------------------------------------------------------------------------------GCACT-CCAATCTCT----C----TCTCTCTCTCTTTTCCATTCTCTCTCTTACTATCCACGACTCTCTG--TC--TC-TC----------T------TGTT------TGCCACCCCCTTTTT-GG----------T--G---------------------------------------CTACTGCCCTGCAGTT-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTTAAGTTCAA---------------GAAGCACTTTT------CT---------A---------------------------------------------------AATA-----A-AGA--AAAA--C-----------C---------T--T--------CCCC---TTC-ATTTAATTGCAGCATTT-TAAC---------------------------TGAAATAC---------AAG--AAAAATAAATCATGACTGAAGTTGAGCAACCGCCACAGAATGGAASizeHit CountTotal NormTotal
No Reads
droBia1
C-ACTCTC-----TGAGAGT-------------------------C--TC-----------G-A--AC-------TCGGGTGGTT---------------------------------------------------------------------------------GCGCT-ACACTCTCT----T-----TTCA----------------------------------CTCTCTT--CC--TC-TC----------T------TGTC------TGCCACCCCCTTTTT-GG----------T--G---------------------------------------CTAGTGGCCTGCACTT-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTTAAGTTGAA---------------GAAGTACTTCG-----CAG---------A---------------------------------------------------AATA-----A-AGA---AAA--A-----------C---------T--T--------CCCT---TTC-TTTGATTTGCAGCATTT-TAAC---------------------------TAAAATAC---------AAA--GGAAATAAATCATGACTGAAGTTGAGCAACCGCCACAGAATGGCASizeHit CountTotal NormTotal
No Reads
droTak1
C-ACTCTC-----TGAGAGG-----------------------CTC--TC-----------T-T--AC-------TTGGGTGGTT---------------------------------------------------------------------------------GCACT-ACGCTCTCT----T----TTTCA----------------------------------CTCTATCTCTC--TT-TC----------T------TGTT------TGCCACCCCCTTTTT-GG----------T--G---------------------------------------CTACTGCCCTGCAGTT-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTCAAGTTGAA---------------GAAGAACTTTT-----CCT---------A---------------------------------------------------AATA-----A-AGAAAA--AAAA-----------C---------C--T--------CCCT---TTC-ATTTAATTGCAGCATTT-TAAC---------------------------TGAAAAAC---------AAA-AGGAAATAAATCATGACTGAAGTTGAGCAACCGCCACAGAATGGCASizeHit CountTotal NormTotal
No Reads
droEle1
C-ACTCTC-----TGAGAGA-----------------------CTC--TC-----------T-T--AC-------TTGGGTGGTT---------------------------------------------------------------------------------GCACT-GCACTCTTT----CTCTCTTGCT--------------------------------------CTCTCGC--TC-TC----------T------TTTT------TGCCACCCCCTTTTC-CG----------A--------------------------------------------ACTGCCCTGCAGTT-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTTAAGTTGAA---------------GAAGCACTTTG-----CCT---------A---------------------------------------------------AATA-----A-A---AAAAA--C-----------C---------A--T--------ACCC---TTC-ATTTAATTCCAGCATTT-TTAC---------------------------TGAAATAA---------AAG--GGAAATAAATCATGACTGATGTTGAGCAACCGCCACAGAATGGCASizeHit CountTotal NormTotal
No Reads
droRho1
C-ACTCTC-----TGAGAGA-----------------------CTC--TC-----------T-T--AC-------TTGGGTGGTT---------------------------------------------------------------------------------GCACT-GCACTCTCT----C----TTCCA----------------------------------CTCTCTATCTC--TC-TC----------T------TGTT------TGCCACCCCCTTTTC-CT----------A--------------------------------------------GCTGCCCTGCAGTT-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTTAAGTTGAA---------------GAAGCACTTTG-----CCT---------A---------------------------------------------------AATA-----T-A---AAAAA--C-----------C---------G--T--------CCCC---TTC-ATTTAATTGCAGCATTT-TAAC---------------------------AGAAGTAA---------AAG--GAAAATAAATCATGACTGATGTTGAGCAACCGCCACAAAATGGCASizeHit CountTotal NormTotal
No Reads
droFic1
C-ACTCTC-----TGAC--TCTCTC-TAGA-------------CTC--TC-----------T-T--AC-------TTGGGTGGTT---------------------------------------------------------------------------------GCACT-GCACTCTCTCTTTTCGTTCTC-------------------------------------T--CTCTCTC--TC-TC----------T------TATT------TGCCACCCCCTTTTT-CG----------T--G------------------------------------------CTGCCCTGCAGT--TTTAAGGTCAGTTGAAAATTTTCCAGCTGAGCGTTAAGTTCAA------T-------AGAAGCACTTTG-----CCG---------A---------------------------------------------------AATT-----AATGAAAAAAA--A-----------C---------T--T--------CCC------C-ATTTGATTGCAGCATTT-TAAC---------------------------TGAACCAC---------AAA--AGTAAAAAAACATGACTGAAGTAGAGCAACCGCCACAGAATGGCASizeHit CountTotal NormTotal
No Reads
droKik1
T--CTGAC-----GGAGAGAG--------AA------------CTC--TC-----------T-TCCAT-------TTGGGTGGTT---------------------------------------------------------------------------------GCACT-TTACTCTCT----C----TTTCT----------------------------------CTGTCAGCCGCTCTC-AG----------T------GTTT------TGCCACCCCCTTTTT-CG----------T--T----T------GT--T-----------------------CAACTGCCTTGCAGTTTTTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTAAAGTTGAT----GAA-------AGAAACAC--CGCCTAACG----------------------------------------------------------------TA-----A-AGT---TTA--T-----------C---------T--T--------CTC----CGT-TCTTTATTGCAGCATTT-TAAC---------------------------TGAAATAC---------AAA--AGAAATAAATCATGACTGAAGTCGAGCAACCGCCACAAAACGGCASizeHit CountTotal NormTotal
No Reads
droAna3
C-GCTCTCTTCTCTGAGTGCTACTCT---CTCTCTCGGAGAGAGTA--TC-----------GGC--AC-------TTGGGTGGTTGCGTTGCATTCGCTCTCTCTTCCCGCTCTCTTTCACTCTCTTTGA-CTCTCTTTGACTCTCTTATGCTCCCTTGTGCGCT---------------------------------------------------------------------------------CTTGCGCTCTCTGTGTCT--TGGGCTGAAGCCACCCCCTTTTTTCG----------T--G------------------------------------------CTGCCCTGCACTT-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTAAAGTTCAA---------------GAAACACTTTT-----TCT---------A-------------AAAACAAATTTT------------------------------------------------------------T---------A--T--------TC-----CAT-TTTTTTTTGCAGCATTTTTAAC---------------------------TAAAATAC---------AAA--AGAAATAAATCATGACTGAAGTCGAGCAACCGCCACAAAATGGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGACTGAAGTCGAGCAACCGCCACA........2711.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGAAGTCGAGCAACCGCC...........2111.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGTCGAGCAACCGCCACA........2211.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAGCAACCGCCACAAAATGGCA2511.001000010
droBip1
C-GCTCTCCGCTCTGAGTGGCTCTCT---------CTGTGAGAGTG--TCTCGCCCTCAGCGGC--AC-------TTGGGTGGTT---------------------------------------------------------------------------------GCATT-GCATTCTCT----T----CTCCG----------------------------------CTCTCTTTCGC--TC-TCTTGCGCTCTCG-AGTGC--TGGGCCG-TGCCACCCCCTTTTC-TG----------T--G----C------------------------------G----CGCTGCCCTGCACTT-TTTAAGGTCAGTCGAAAATTTTCCAGCTGAGCGTAAAGTTGAA----GAAACT--A---AAACACTTTT-----CCT---------A---------------------------------------------------AA-------------------AC---GGTTTTTTC---------T--T--------CT------TCGATT--TTTGCAGCATTTTTAAC---------------------------AAAA-------------AAA--AGGAATAAATCATGACTGAAGTCGAGCAACCGCCACAAAATGGCASizeHit CountTotal NormTotal
No Reads
dp5
AAGTTCTC-----TCAGCGCTATTC------------------CTC--TC-----------T-C--GCTTAAATTTTGGGTGGTT---------------------------------------------------------------------------------GTGTTTGCCCGCTCT----C----TCTCG------------------------------------------CTC--TC-TC----------T------CTGT------TGCCACCCCCTTTTTTCCATTTCGCATGTGTTTGTGTGTGTGTGTACACAACGG-GAACAGTGTAGAA----CGGTGCTCTGCCGT--TTTAAGGTCAGTTGAAAATTTTCCAGCTGAGCGTAAAGTAAGCGTACAAAATGTGAA-GGAAAAGCAAT-----TGT---------A---------------------------------------------------A-TA-----T-A---AAATT--C----------CC---------TTTT--------CC-----CCT-TTTCGTTTGCAGCATTT-AAAC---------------------------AGAA---------------A--AGGAAGCAAACATGACTGAAGTCGAGCAACCGCCACAGAATGGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACATGACTGAAGTCGAGCAACCGC............2611.0010000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCAAACATGACTGAAGTCGAGC..................2511.0010000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTGAAGTCGAGCAACCGCCACA........2511.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--------CC-----CCT-TTTCGTTTGCAG........................................................................................................1911.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGACTGAAGTCGAGCAACCGCCACAG.......2811.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTT-AAAC---------------------------AGAA---------------A--AGGAAG.......................................1911.0010010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAC---------------------------AGAA---------------A--AGGAAGCAAA...................................1911.0010000100000
droPer2
AAGTTCTC-----TCAGCGCTATTC------------------CTC--TC-----------T-C--GCTTAAATTTTGGGTGGTT---------------------------------------------------------------------------------GTGTTTGCCCGCTCT----C----TCTCG----------------------------------CTCTCT--CTC--TC-TC----------T------CTGT------TGCCACCCCCTTTTTTCCATTTCGCATGTGTTTGTGT--GTGTGTACACAACGG-GAACAGTGTAGAA----CGGTGCTCTGCCGT--TTTAAGGTCAGTTGAAAATTTTCCAGCTGAGCGTAAAGTAAGCGTACAAAATGTGAA-GGAAAAGCAAT-----TGT---------A---------------------------------------------------ATTT-------A---AAATA--C----------CC---------TTTT--------CC-----CCT-TTTCGTTTGCAGCATTT-AAAC---------------------------AGAA---------------A--AGGAAGCAAACATGACTGAAGTCGAGCAACCGCCACAGAATGGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAACATGACTGAAGTCGAGCAACCGC............2912.002200000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGACTGAAGTCGAGCAACCGC............2312.002200000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAACATGACTGAAGTCGAG...................2212.002200000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACTGAAGTCGAGCAAC...............1911.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGAAGTCGAGCAACCGC............2011.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACATGACTGAAGTCGAGC..................2011.001001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAACATGACTGAAGTCGAGC..................2311.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAACATGACTGAAGTCGAGCAACCGC............2811.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAGCAACCGCCACAGAAT....2111.001100000
droWil2
G-GCTCTCTT----ATCACGCTCT-------------------------T-TGCTCTCTTCAAC--TC-------TCTGGCACTT--------------------------------------GCTTTGCTTTCTCTCTATTTCTCAAATAATTTTTTGGGTGGTTGCGCC-TTACTCTCT----------------------------------------------------------------------------------------------CCCACCCTC---------------------------------------GAGAG-AAAAA---AAAAA----TTATATGCTG--------------CAGTTGTAGATTTTGCAGCCCAGTGAGAAGTAGGAAAATAAA-------AGAAGAATTTT-------CT----ATATTAAATTATAATGTATTAAAAAAATTCT------------------------------------------------------------------TATTTT-T--------TT-----AAT-GTTTATTTACAGCATTTGCAATATAAGAGGAAAATATATAAAGTGTAATAGAAACGTAAAACGAAAAAA--CTAATTGAAAGATGACTGAAATTGAGCAACCGCCACAAAATGGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAATTGAGCAACCGCCACAAAAT....2512.00220000
...................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATAAA-------AGAAGAATT...............................................................................................................................................................................................................................................................1812.00202000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAAAGATGACTGAAATTGAGCAACC..............2812.00220000
.........................................................................................................................................................TTTTTGGGTGGTTGCGCC-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATATAAGAGGAAAAT.................................................................................1811.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--CTAATTGAAAGATGACTGA..........................2111.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTGAGCAACCGCCACAAAATGGC.2611.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGCAATATAAGAGGAAAATATA..............................................................................2511.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTAATAGAAACGTAAAA.......................................................1911.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAAAGATGACTGAAATTGAGC..................2411.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGAAAGATGACTGAAATTGAGC..................2511.00110000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAGCATTTGCAATATAAGAGGAAA...................................................................................2711.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGAGGAAAATATATAA...........................................................................1911.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAAAGTGTAATAGAAAC.............................................................2020.50100100
droVir3
GCACTCTC-----TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCT----T----TCCCA------------------------------------------CTC--CTTTG----------C------TGTT-GGCA-CAACACCCCCTTTTC-AT-------------------------------AACGG-AAACC---AAAAG----TTTTGGCCTGCACTT-TTTAAGGTCAGTTGAAAATTTT-CAGTTGG-C---AAAT------------------------ACAT-------------------------------ATTAAGAAAATACACATCCATTTTATTTTTATTTA-----GATTAAAAAA-A---AAAAA--ACTA--------ATTGTGTATTTTTGTTTG-CCTTGCATACTTT-GTGTATTTTTAGCATTT-GAAC---------------------------TAAAATATAAAAAAAAA--AAATAAACTGAAACATGACTGAGGTAGAGCAACCGCCACAGAACGGCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATGACTGAGGTAGAGC..................1912.002001100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--AAATAAACTGAAACATGACTGAGGT.......................2612.002000000000000000001000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTAGAGCAACCGCCACAA.......2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCAACCGCCACAGAAC....1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAACATGACTGAGGTAGAGCA.................2411.001000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................T-------------------------------AACGG-AAACC---AAAAG----TTTTG............................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................CTCT----T----TCCCA------------------------------------------CTC--CTTTG----------C------TG.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000100000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATGACTGAGGTAGAGCAAC...............2211.001100000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAACTGAAACATGACTGAGGT.......................2311.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAAACTGAAACATGACTGAG.........................2311.001000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTATTTTTGTTTG-CCT...............................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACATGACTGAGGTAGAGC..................2011.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGAAACATGACTGAGGTA......................2211.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................T----TCCCA------------------------------------------CTC--CTTTG----------C------TGTT-GGCA-.........................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.......C-----TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCT----T----TCCCA------------------------------------------CTC--CTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
droMoj3
C-TCTCTC-----TCTT--T---------------------------------------------------------------------------------------------------------------------------------------------------------CGCTCTCT----C----TCGCA----------------------------------TTGTCGG--TG--TC-TC----------T------CTTT------TGACACCCTATTTT---G----------T--T--------------CATAACGG-AAACC---AAAAG----TTTTGGCCTGCACTT-TTTAAGGTCAGTTGAAAATTTT-CAGCTGAGCCTGTCGAAAGCAA----AAT-----------ATTT-------ATAGATA-TAT-A-------------AAAACTAATTTG------TA------TTACTTTAAGTAAATA-----A-A---ATAAA-AA-----------GTTGCGTATTTTTT--------TG-----TGT-TTTTGTTTTTAGCATTT-GAAC---------------------------TAAATTTA------AATAAA--TTAACTGAAACATGACTGACGTTGAGCAACCGCCACAGAATGGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTGAAACATGACTGACGTTGAGC..................2611.001100000
droGri2
G--CTTTC-----TGTCATTCTCT-------------------------C------------------------------------------------------------------------------------------------------------------------------TCTCT----C----TTTCT----------------------------------CTCTCGGCCTC--TC-TC----------G------ATTT------TGCCACCCCCTTTTT-CC-----------------------------ACAACTGTAAACC---AGAAATGGTTTTTGGCTTGCACTT-TTTAAGGTCAGTTGATAATTTT-CAGCTGAGCCCAACGAAAGCAAAAGAAATTTGAA-AA--TACATTT-----ACAAGCATTAT-A-------------------A----------ATTTGATACTTATTTA-----A--------------------A-------------TTGTTTATTTTTGTGTATGCTTGCT---TGC-GTCTATTTTTAGCATTT-CAAG---------------------------TAAATTATAATAAAGC-A-AACTAAGAAGAAACATGACTGAGGTAGAGCAACCGCCACAGAACGGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAAGAAGAAACATGACTGA..........................2111.00101
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATGACTGAGGTAGAGC..................1911.00101

Generated: 05/18/2015 at 05:44 PM